>input_sequence_48434
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--------CTCCAAGACCCCTCCCTTTCCTTGACATGGAGCTTGAGCTTAGTCTAGGCGATCTTCCAGCTCCAGTGAAGG
CCA---GCACCATGCCTGCGTCGGCGACATGCCAAGGAGAAGACCACGACGACCTTGCGCTAGGGCTACGAGTAACGGCT
ACCCAAAGAGCTGACCAAGATAACCAGAGGATAAGCATAGAAACTGCGGAGGGAGAAGAAGATAGCGACGAAGCATGCCG
CGAACTGCCTGTCAGAGCAAGCCCTTTTCGCCAAGCCTCTTCACAAACAGGTGAGTTGAAGAGAATCCTGCGGAACAAGC
TGTTGAATTGATCGGTTTTCGGTTCCCATCCCAGTAGGTCTATCCATATGTTGCTATGTGCTCGTAGCTTCTGTGTCTGT
AAAAGTCTTTGTATGCTGATGAGTCTTTTTATCTGTACAGCGAGTGCGAATTCACGCGGGTTTGATGTGAACGCTGCTGT
TCCGGTGGATGGCAGAGCATCGATAGCGAGGTCTTTGCCACCGCCGTCCATGCATATGGAGGTTCCTGTGGCACAGGGAG
TTGATGAGGAAGGTTCAGAGGACGAAGACAATGGAGGTGGAAGGGTGAGGAAGAAACTGAGGCTGTCCAAGGAACAGTCT
GCGTTTCTAGAGGGTAGCTTCAAAGAGCACAGCACGCTAACCCTGGTATGCACCTTCTGCCTGCATATTTTCCTAATCGA
TCAAAATAAGTG-----------------------------------------------GATGATATAGCTGGAT--ATT
CATTCGGCATATATACAGGAACAGAAGAGCTGTTTAGCCAACCGGCTGAGCCTTCGACCGCGCCAAGTTGAGGTCTGGTT
CCAAAACAGAAGAGCCAGGTATGTAACAAAATTTATATAGCAGTAATTTATATACCATT--TTTTGATGTCACCATTTTC
CAAAACAGAAGAGCGAGG----AAATCTAACACCATGTTTATCACAGGACGAAGCTGAAGCAGACGGAGGCGGACTGCGA
GCGCCTGAAGCGCTGCTGCGACGCGCTGGCACGGGAGAACCGTAAGCTCCAGCGGGAGGTGGCGGAGCTGCGCGCCTCCC
GTGCCCCGTACCCGCTCTACAATCTGAATCACCACCTGTCTGGGTTCAGCACGGTGCTCCCAGCGGGCTCATCATGTGAC
GCCACCACCCGTTCCACAGTCTCCGCCGTGTC---ATCCCCGGGACCGTCGCTGGTGTCCACCTTGTTTCCCGGCAGGCC
TCACTTTGGCCCCTTCACCGTCAGCCACCCGGTGCTCCCCCTCTGCCACCAGCCCTCGGCGACATTGTGACATGGCTGGC
TAGCCCGGCCGGCCCGTTCATGTTGCCTAAGTTATGTAAATAGTCT-----------GTCAGCAGTGATGTACATACATA
--------GAAAGGAGTCGAAAACCATGTATGCATC-TACTTTGTAAACTCTAT--AGTTTAGCCAGTTTTATAACGGTA
GATAAGCTCGCTTA------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TGGTAGGTGTGGAATTTGCTATTACGTGGCTGACTTTGGA
AACTTGATTTGGCTTTGTAAAATATAT------GATCAATGATGTGGTTTGTAGAGGTGTCATCCTGGCAATTGTCA---
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>chr1A_1_TraesCS1A01G372900
ATATGCTACACAATTGGACTTGCTACCTAGTGTAGTGGTTCTTACAACTTCTGAAAAAGTGGTTTGTTACATGTTATCCA
CACATTAGACTCCAGATAGTCACATCAT-GGCTACTTATTTGTGGAGTATCTAGACCACCTCAGCTTGAAGATGATCGCA
GCTCAGATTTTGACATATGGACATCACGATACCAACTACTCCTATTCCCATAGGCAGCCGTAGCAGTCAGTGTGATAAAT
TCAGTGAGCATTCTGCCTTGCTATACGGGTTTTGTT-ACAGTAAGAATTGTCTCTTACCGATAAGCTTATCATTTCTTAA
GGAGAGATAACTTTCCAAGCAATCTTGTGACAAAGCATATTCTATGTTATTTTTGCAAAGCACAATTATTGATCAAATTA
ATGATAATCCTCTATTAGTTGAATAAATTGTTTGGCTTTCAACCATGCCTTTTCTTGGAAGGGCAAAACCGGTAATTTTG
TTAAGAAAAGACAAAGTGTGTTCTAGAT-------ACTAGTTGCATAAATTATTTGGTTTTCAACC--------------
------ATGCCTTTTCTTGGAAGGACAAGAATGGTTGTTTCCTTGAGAAAAGAAAACGTCTTATATCTTCCTAATGTGTG
---GGAGAAATGCAAATGTC--------ATAATAGCTCGTAATAATGCTCCTCTGAGAATCTCTTATTTTTTT----AAT
GTCAAAGTGATAGTTTTGTGGACCTCGGTTGAAATATG--AATCTCCAGTTAACCCTCTCCATAAGAGTAGTTTCAAAGT
TCAAATATATTGCACACTTAGCCTAGCATTATAAATAATATTTTTTAAAATTATTGGAATAGAAGGAAACATGATATAAT
ATTGGAGGTTGATGGGACAAGCAATAGATAACAATCC-AATCCAAACGTGTTCTCTGATACTTAA-CATGTTTGAGTTTA
TTTTATCAAACCCGATGATTACTTGCTTGATTGGCCGACCACTACTATATATGTGGTACTTGCTATTTGTTCCCTCTTTG
CCTCATCACTCCAAGACCCCTCCCTTTCCTTGACATGGAGCTTGAGCTTAGTCTAGGCGATCTTCCAGCTCCAGTGAAGG
CCA---GCACCATGCCTGCGTCGGCGACATGCCAAGGAGAAGACCACGACGACCTTGCGCTAGGGCTACGAGTAACGGCT
ACCCAAAGAGCTGACCAAGATAACCAGAGGATAAGCATAGAAACTGCGGAGGGAGAAGAAGATAGCGACGAAGCATGCCG
CGAACTGCCTGTCAGAGCAAGCCCTTTTCGCCAAGCCTCTTCACAAACAGGTGAGTTGAAGAGAATCCTGCGGAACAAGC
TGTTGAATTGATCGGTTTTCGGTTCCCATCCCAGTAGGTCTATCCATATGTTGCTATGTGCTCGTAGCTTCTGTGTCTGT
AAAAGTCTTTGTATGCTGATGAGTCTTTTTATCTGTACAGCGAGTGCGAATTCACGCGGGTTTGATGTGAACGCTGCTGT
TCCGGTGGATGGCAGAGCATCGATAGCGAGGTCTTTGCCACCGCCGTCCATGCATATGGAGGTTCCTGTGGCACAGGGAG
TTGATGAGGAAGGTTCAGAGGACGAAGACAATGGAGGTGGAAGGGTGAGGAAGAAACTGAGGCTGTCCAAGGAACAGTCT
GCGTTTCTAGAGGGTAGCTTCAAAGAGCACAGCACGCTAACCCTGGTATGCACCTTCTGCCTGCATATTTTCCTAATCGA
TCAAAATAAGTG-----------------------------------------------GATGATATAGCTGGAT--ATT
CATTCGGCATATATACAGGAACAGAAGAGCTGTTTAGCCAACCGGCTGAGCCTTCGACCGCGCCAAGTTGAGGTCTGGTT
CCAAAACAGAAGAGCCAGGTATGTAACAAAATTTATATAGCAGTAATTTATATACCATT--TTTTGATGTCACCATTTTC
CAAAACAGAAGAGCGAGG----AAATCTAACACCATGTTTATCACAGGACGAAGCTGAAGCAGACGGAGGCGGACTGCGA
GCGCCTGAAGCGCTGCTGCGACGCGCTGGCACGGGAGAACCGTAAGCTCCAGCGGGAGGTGGCGGAGCTGCGCGCCTCCC
GTGCCCCGTACCCGCTCTACAATCTGAATCACCACCTGTCTGGGTTCAGCACGGTGCTCCCAGCGGGCTCATCATGTGAC
GCCACCACCCGTTCCACAGTCTCCGCCGTGTC---ATCCCCGGGACCGTCGCTGGTGTCCACCTTGTTTCCCGGCAGGCC
TCACTTTGGCCCCTTCACCGTCAGCCACCCGGTGCTCCCCCTCTGCCACCAGCCCTCGGCGACATTGTGACATGGCTGGC
TAGCCCGGCCGGCCCGTTCATGTTGCCTAAGTTATGTAAATAGTCT-----------GTCAGCAGTGATGTACATACATA
--------GAAAGGAGTCGAAAACCATGTATGCATC-TACTTTGTAAACTCTAT--AGTTTAGCCAGTTTTATAACGGTA
GATAAGCTCGCTTA------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TGGTAGGTGTGGAATTTGCTATTACGTGGCTGACTTTGGA
AACTTGATTTGGCTTTGTAAAATATAT------GATCAATGATGTGGTTTGTAGAGGTGTCATCCTGGCAATTGTCAGGA
GATCTCTAATTCCCATTTGTGTACCAGTCACAGTGTAGCACATGCCATTTCCTGGTTAAACATTAACTGTGACCTAATGA
CTCTGCATGCTGGCTGAAAATAACAATGAAATTGATGATGCGGACCTCTGCAAATTACAATCATTGAGGCTGTATCACTG
TCACTACGTATGCGTATGTGTAGGAGAATTTGCCAGTTATGAAACTTCTCTTGGTGGTTGCGTGATTGCCGGCAAAAAGA
AACAAAGGAGAGGGAGCATGCAACGTGTAGCAACACTGGCCAAATAATCAAACTGATGTATGGAATTCTGGGTTCCCGCC
GGACG----CCGTCAGCATCAAGTTGGATATGCGCCGCACACCTGTCACCTAAGTGTAC---ACTACGTTAGAATTATGT
CGATTATCTATATAGGGATATAGTTTGGACTTTGGACTCGGAATATGCAGAGGGTTAGGTTTTTAGTTCAAACATATGAT
AGTCAGGACTATTAATCAAGTGCACTGTCGCATGGCCAAAAGAGACTAAACGAAGCTGTTGGCTAGACAGGAGATCACGA
AGGGGATGGTCCGGGCGGCTGTGCCAAGGGTATCTGGACAGGCCATGGGGCATTGAGATGTGTCTGATGGCCATGGCCAA
CTTGTCGTCGATCCGTATTATGTGATTTAGTTCATGG-AAGGAGCACCCATAGTCATGCTCCTAGGGTATGTATAGCGAT
GTTGATATATTTGGTTAACATAC---------------------------------------------------------
--------------------------ACGTATCATCTCCCTGTTCTTAGAAAAAACATATCATCTCTCTCATCTACTTTT
AGTAATGATCTATTTGCATCTTTTGTAACACACTTTTCAATGTCAAGCATTGTAAGATAAGATAAGCTTGGCGATTACGC
ACGTCGAGACAAGGGGAGAGACACAGGAAGTTGACAGCGCCAGGTCTGGCTTACACCTGTTGAAGTGGACGACCAGCTAC
AACACTAGAGTAGCATATATTCGCACTCGAAGCTTTGATTGGGTGCTC
>chr1D_1
ATCTGCTACACAATTGGACTTGCTACCTAGTGTAGTGGTTCTTACAACTTCTGAAAAAGTGCTTTGTTACGTGTTGTCCA
TACATTAGACTCCAGATTGTCACATCATGGGCTACTTATTTGTGGAGTATCTAGACCACCTCAGCTTGAAGATGATCGCA
GCTCAGATTTTGACATTTGGACATCACGGTACCAACTACTCCTATTTCCATAGGCAGCCGTAGCAGTCAGTGTGATAGAT
TCAGTGAGCATTCTGCCTTGCTGTACGGATTTGGTTAACAGTAAGAATTGTCT--TACCGATAAGCTTATCATTTCTTAA
GGAGAGATAACTTTCCAAGCAATCTTTTGACAAAGCATATTCTGTATTATTTATGCAATGCACAATTATTGATCAAATTA
ATGATAATCCTCTATTAGTTGAATAAATTATTTGGCTTTCAACCATGCCTTTTCTTGGAAGGGCAAAACTGGTAATTTTG
TTAAGAAAAGACAAAGTGTTTCAGATTTCTATTGCACTAGTTGCATAAATTATTTGGTTTTCAACC--------------
------ATGCCTTTTCTTGGAATGACAAGAATGGTTGTTGCCTTAAGAAAAGAAAATGTCTTATAGCTTCCTAATGTCTG
---GGAGAAATGCAAATGTCATAAACTCATAATAGCTCGTAATAATGCCCCTCTGAGAATCTCCTATT-TTTT----AAT
GTCAAAATGATAGTTTTGTGGACCTCGGTTGAAATATGAAAATCTCCAGTTAACCCTCTCTATAAGAGTAGTTCCAAAGT
TCAAATAGATTGCACACTTATCCTACCATGATAAAAAAAAA-----------ATTGGAATAGCAGGAGAGATGATATAAT
ATTGGAGGTTGATGGGACAAGCATTATATAATAATAATAATACAAACGTGTTCTTTGATACTTAATCATGTTTGAGTTTA
TTTTGTCAAAACTGATGATTACTTACTTGATTGGCCGACCACCACTATATATGTGGTACTTGCTATTTGTTTCCTCTTTG
CCTCATCACTCCAAGACCCCTCCCTTTCCTTGACATGGAGCTTGAGCTTAGTCTAGGCGATCTTCCGACTCCAGTGAAGG
CCA---ACACCATGCCTGCGCCGGCGACATGCCAAGGAGAAGACCACGACGACCTTGCACTAGGGCTACGAGTAACGGCT
ACCGAAAGAGCTGGCCAAGAAAACCAGAGAACAAGCATAGAAACTGCGGAGGG---AGAAGATAGCGATGAAGCATGCCC
CGAACTGCCTGTCAGAGCAAGCCCTTTTCGCCAAGCCTCTGCACAAACAGGTAAGTTAAAGAGAATCCTGCAGAACAAGC
TGTTGAATTTGA------TCGGTTCCCATCCCAGTAGGTCCATCCATATGTTGCTATGTGCTCGTAGCTTCTGT--CTGT
AAAATTATTTGTATGTTGCTGAGTCATTTTTTCTGTACAGCGAGTGCGAATTCACGCGGGTTTGATGTGAACGCTGCTGT
TCCGGTGGATGGCAGAGCATCGACAGCGAGGTCTTTGTCACCGCCGTCCATGCATATGGAGGTTCCTGTGACACAGGGAG
TTGATGAGGAAGGTTCAGAGGATGAAGACAATGGAGGTGGAAGGGTGAGGAAGAAACTGAGGCTGTCCAAGGAACAATCT
GCGTTTCTAGAGAGCAGCTTCAAAGAGCACAGCACGCTAACCCTGGTATGCTATGCAATAT------TTTTTCTAATCGA
TCAAAATAAGTG-----------------------------------------------GATGATGTAGCTGGATTCATT
CATTCGGCATATATCCAGGAACAAAAGAGCTGTTTAGCCAACCGGCTGAGCCTTCGACCACGCCAAGTTGAGGTCTGGTT
CCAAAACAGAAGAGCCAGGTATGTAACAAAATCTATACACCAGTAGTTTTCCCCTTTTGAGTTTTGATGTCACCATTTTC
CAGAACAGAAGAGCGACG----AAATCTAACATCATATTTATCGCAGGACGAAGCTGAAGCAGACGGAGGCGGACTGCGA
GCGCCTGAAGCGCTGCTGCGACGCGCTGGCACGGGAGAACCGTAAGCTCCAACGGGAGGTGGCGGAGCTGCGCGCCTCCC
GTGCCCCGTATCCGCTCTACAATCTGAATCACCACATGTCTGGGTTCGCCACGGCGCTCCCAGCGTGCTCATCATGTGAC
GCCACCGCCCGTTCCACCGTCTCCGCCGTGTC---ATCTCCGGGACCGTCGCCGATGTCCACCTTGTTTCCCGGCAGGCC
TCACTTTGGCCCCTTCACCGTCACCCACCCGGTGCCCCCCCTCCGCCGCCAGCCGTCGGCGACATTGTGACGTGGCTGGC
TAGCCTGGCCGGCCCGTTCATGTTGCCTAAGTTATGTAAATAGCCTCTTGTGTTTTTGTCACCAGTGATGTACATACATA
CATACGTAGAAAGGAGTCGAAAACCATGTGTACATC-TACTTTGTAAACTCTAC--AGTTTAGCCATTTTTATAACGGTA
GATGAGCTGAGCTCGCTTATACTCCCTTCGTTCCTAAATACTCCCTCCGTTTCTAAATACTTGTCTTTCTAGGCATTTCA
AATGACTATCACATACGGATGTATGTAGACATATTTTAGAGTGTAGATTCACTCATTTTACTCCGTATGTAGTCACTTGT
TGAAATCTCTATAAAGACAAATATTTAGGAACGGAGGGAGTAGTAGGTGTGGAATTTGCTATTACGTGGCTGACTTTGGA
AAGTTGATTTGGCTTTGTGTAAAAAATATAATCGATCGATGATGTGGTTTGCAGA-GTGTCATCCTGGCAATTGTCGGCA
GATCTCTAATTTCCATTTGTGTACCAGTCACAGTGTGGCACATGCCATTTCCTGGTTAAACATTAACTGTGACCCAATGA
CTCTGCGTGCTGGCTGAAAAGGACAATGAAATTGGTGATGCGGACCTCTGCAAATTACAATCATTGAGGCTGCATCACTG
TCATCACATATGCGTATGTGTAGGAGAATTTGCCAGTTATGAAACTTGTCTTGGTGGTTGCGTGATTGCCGGCAAAAAGA
AAC----GAGAGGGAGCATGCAACGTGTAGCAACACTGGCCAAATAATCAAACTGATGTGTGGAATTCTGGGTT----CC
GGACG----CCGTCAGCATCAAGTTGGATATGCGCCGCACACCTGTCACCTAAGTGTAC---ACAACGTTAAAATTATGT
CGATTGTCTATATAGGGATATATATAG---TTTGGACTTGGAATATGCAGAGGGTTAGGTGTTTGGGTCGAACATATGAA
ACTCAGAACTATTATATAAATGCGCCGTCGCATGGCCAAAAGAGACTAAACGAAGCTGTTGGCTAGACAGGAGATCATGA
AGGGGATGGTCCGGGCGCCTGTGCCAAGGGTGTCCGGACAGGCCATGGGGCATTGAGATGTGTCTGATGGCCATGACCAA
CTTGTCATCGATCTGTATTATGTGATTTAGTTCATGGAAATGAGCGCCTATAGTCATGCTCCAGGG----GTATAGCCAT
GTTAACATATTTGGTTAACATAC---------------------------------------------------------
--------------------------ACGTATCATCTCCCCGTTCTTAGAAAAAACATATCATCTCTCTCATCTACTTTT
AGTAATGATCTATTTGCATCTTTTGTAACACACTTTTCCATGTCAAGCATCG-----TAAGATAAGCTTGGCGATTACGC
ACGTCGAGACAAGGGAAGAGACACAGAAAGTTGACAGGGCCAGGTCTGGCTTACACCTGTTGAAGTGGACGACCAGCTAC
AACACTAGAGTAGCATATATTCGCACTCGAAGCTTTGATTGGGTGCT-
>chr1B_1
ATCTGCTACACAATTGGACTTGGTACCTAGTGTAATGGTTCTTACAACTTCTGAAAAAGTGCTTTGTTACGTGTTGTCCA
CACATTAGACTCCAGATTGTCACATCATGGGCTACTTATTTGTGGAGTATCTAGACCACCTCATCTTGAAGATGATCGCA
GCTCAGATTTTGACATATGGACATCACCATACCAACTACTCCTATTTCCATAGGCAGCCGTAGCAGTCAGTGTGATAAAT
TCAGTGAGCATTCTGCCTTGCTGTACGGGTTTTGTT-ACAGTAAGAATTGTCT--TACCGATAAGCTTATCATTTCTTAA
GGAGAGATAACTTTCCAAGCAATCTTTTGACAAAGTATATTCTATATTATTTATGCAAAGCACAATTATCGATCAAATTA
ATGATAATCCTCTATTAGTTGGATAAATTATTTGGCTTTCAACCATGCCTTTTCTTGGAAGGGCAAAACTGGTAACTTTG
TTAAGAAAAGACAAAGTGTTTTAGATTTCTATTGCACCAGTTGCAAAAATTATTTGGTTTTCAATCATGCCTTCTTTTTT
TTGAAAATGCCTTTTCTTGGAATGACAAGAATGGTTGTTGCCTTAAGAAAAGAAAACGTGTTAAAGCTTCCTAATGCGTG
CGTGGAGAAATGCAAATGTC--------ATAATAGCTCATAATCATGCTCCTCTGAGAAACTCCTATT-TTTTAATGAAT
GTCAAAGTGATAGTTTTGTGGACCTCGGTTGAAATATG--AATCTCCAGTTAACCCTATCCATAAAAGTACTTTCAAAGT
TCAAATAGATTGCACACTTAGCCTAGCATTATAAAAAATA-TTTTTCAAATTATTGGAATAGCAGGAGACATGATATAAT
ATTGGAGGTTGATGGGACAAGCATTAGATAACAATCC-AATCCAAACGTGTTCTCTGATACTTAATCATGTTTGAGTTTA
TTTTGTCAAAACCGATGATTACTTACTTGATTGGCCGACCACTACTATATATGTGGTACTTGCTATTTGTTTCCTCTTTG
CCTCATCACTCCAAGACCCCTCCCTTTCCTTGACATGGAGCTTGAGCTTAGTCTAGGCGATCTTCCAGCTCCAGTGAAGG
CCAACAACACCATGCCCGCGCCGGCAACATGCCAAGGAGAAGACCACGACGACCTTGCGCTAGGGCTACGAGTAATGGCT
ACCGAAAGAGCTGACCAAGATAACCAGAGGACAAGCATAGAAACTGCGGAGGG---AGAAGATAGTGACGAAGCATGCCG
GGAACTGCCTGTCAGAGCAAGCCCTCTTCGCCAAGCCTCTGCACAAACAGGTAACTTGAAGACAGTCCTGCAGAACAAGC
TGTTGAA-TTGA------TCGGTTCCCATCCCAATAGGTCCATCCATATGTTGCTATGTGCTCGTAGCTTCTGT--CTGT
AAAATTCTTTGTATGCTGATGAGTC-TTTTTTCTGTACAGCGGGTGCGAATTCACGGGGGTTTGATGTGAACGCTCCTGT
TCCGGTGGATGACAGAGCGTTGATAGCGAGGTCCTTGTCACCGCCGTCCATGCATATGGAGGTTCCTGTGGCACAGGGAG
TTGACGAGGAAGCTTCAGAGGAAGAAGACAATAGAGGTGGAAGGGTGAGGAAGAAACTGAGGCTGTCCAAGGAACAATCT
GCGTTTCTAGAGGGTAGCTTCAAAGAGCACAGCACGCTAACCCTGGTATGCACCTTCTGCCTGCATATTTTCCTAATCCA
TCAAATGGAAACTTGCTTGCCTTGCCCTATCTTGTTCTAGTGCACCTAAAATAAGTATAGATGATATAGATGG----ATT
CATTCGGCATATATACAGGAGCAAAAGAGCCGTTTAGCCAACCAGCTGAGCCTTCGACCACGCCAGGTTGAGGTCTGGTT
CCAAAACAGAAGAGCCAGGTATGTAACAAAATTTATACACCAGTAGTTTTCCC--------TTTTGATGTCACCATTTTC
CAAAACAGAAGAGCCAGGTAACAAATCTAACATCATGTCGTTCACAGGACGAAGCTGAAGCAGACGGAGGCGGACTGCGA
GCAACTGAAGCGCTGCTGCGACGCGCTGGCACGGGAGAACCGTAAGCTCCAGCGGGAGGTGGCGGAGCTGCGCGCCTCCC
GTGCCCCGTACCCGCTCTACAATCTGAATCACCACCTGTCTGGGTTCAGCACGGCGCTCCCAGCGTGCTCATCATGTGAC
GCCACCACCCGTTCCACCGTCTCTTCCGTGTCGTCATCTCCGGGACCGTCGCCGATGTCCACCTTGTTTCCCGGCAGGCC
TCACTTTGGCCCCTTCACCGTCACCCACCCGGTGCTCCGCCTCCGCCGCCAGCCCTCGGCGACATTGTGACGTGGCTGGC
TAGCCCTGCCGGCCCGTTCATGTTGCCTAAGTTATGTAAATAGTCTCTTGT-TTTTTGTCACCAGTGATGTACA------
------------------------CATGTATGCATCATACTTTGTAAACTCTATATAGTTTAGCTAGTTTTATAACGGTA
GATGAGCTCGCTTA------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------TAGTAGGTGTGGAATTTGCTATTACGTGGCTGACTTTTAG
AAGTCGATTTGGCTTTATGTAAAATATG--ATCGATCGATGATGTGGTTTGCAGA-GTGTCATCCTGGCAATTGTCAGGA
GACCTCTAATTTCCATTTGTGTACCAGTCACAGTGTAACACATGCCATTTTGTGGTTAAACATTAACTGTGACCCAATGA
CT--------TGGCTGAAAAGGACAATGAAATTGGTGATGTGGACCTCTGCAAACTACAATCATTGAGGCTGTATCACTG
TCAGTA-GTATGCGTATGTGTAGGGGAATTTGCCAATTATGAAACTTCTCTTGGTGGTTGCGTGATTGCCGGCAAAAAGA
AAC----GAGAGGGAGCATGCAACGTGTACCAACACTGGCCAAATAATCAAACTGCTGTATGGAATTCTGGGTT----CC
GGACGGACGCCGTCAGCATCAAGTTGGAAATGCGCCGCACACCTGTCACCTAAGTGTGCACTACTACGTTAAAATTACGT
CGATTATCTATATAGGGATATG----G---TTTGGACTTGGAATATGAAGAGGGTTAGGTGTTTAGGTCGAACATATGAA
ACTCAGAACTATTGTATAAATGCGCCGTCGCATGGCCAAAAGAGACTAAACCAAGCTGTTGGCTAGACAGGATATCATGA
AGGGGATGGTCCGGGCGACTGTGCCAAGGGTGTCCGGACAGGCCATGGGGCTTTGAGATGTGCCGGATGGCCATGGCGAA
CTTGTCATCGATCCGTATTATGTGATTTAGTTCATGGGAAGGAGCATCCGTAGTCATGCTCCAGGG----GTATAGCCAT
GTTGACATATTTGGTTAACATATACTTCCTCCGTCCCATAATGAAAGACGCTTTTTGACACTACACTAGTGTGAAAAAAC
GTCTTACATTATGGGACGGAGGAAGTACATATCATCTCTCGGTTCTTAGAACAAACATATCATCTCTCTCATCTATTTTT
AGTAATGATCTATTTGCATATTTTGTAACACACTTTTCCATGTCAAGCATTG-----TAAGATAAGCTTGGCGATTACGC
ACGTCGAGACAAGGGAAGAGACACAAGAAGTTGACAGGG----------------CCTGTTGAAGTGGACGACCAGCTAC
AACACTAGAGTAGCATATATTCGCACTCGAAGCTTTGATTGGGTGCTC
>SNPs
--S----------------------------------------------------------S--------S----S----
-----------------S--------------------------------------------------------------
----------------------------------------------S---------------------------------
----------------------S------------------------------SS-------------------------
--------------------------S------------------S------S---------------------------
-----------------------------S---------------------------------------S----------
-------------------S--SS-SS-----------------------------------------------------
----------------------S----------------S----S--------------------S--------------
---------------------------------------------------------------S----S-----------
--------------------------------------------------------------------------------
-------S---------------------------S----S-----S---------------S----S------------
-----------------------S--------------------------------------------------------
----S-----S-------------S----------------------------------------------S--------
--------------------------------------------------------------------------------
------S-------------S-----------------------------------------------------------
---S---------------------------S---------------------SSS------------------------
----------------------------------------S-----------S------------------S--------
---------SSSSSSSSS----------------------S---------------------------------SS----
----S--------------------S----S-------------------------------------------------
-------------------------------------S------------------------------------------
----------------------S-----------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-----------------------------------S--------------------
-------------------------------------S-S-----S---SSSSSSSS-S---------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S----------S--------------
-----------------S--------------------S-------------S-S-------------------------
-----------------------S-------------------S---S-----------------------S--------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
--S---------------SS--S--------------S-------------S---S------------------------
-----------S--------------------------------------------------------------S-----
------S-------------SS------------S---------------------------------------------
---S----------------------------------------------------------------------------
---SSSS-------------------------------------------------------------------SSSS--
-----------------------------------------------------------------------S--------
----------------------SS-S-SSS--------S---------------------S-----S--S---------S
-S----S-------SSS--S---S-S---------------------------------------------------S--
-----------------S-------------S--S---------------------------------------------
------S-------------------------------------------------------SS--SSSS-------S--
-----S--------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------S-------------SSSSS-----------------------
---------------S---------------------S------------------------------------------
------------------------------------------------
>forward_583
--------------------------------------------------------------------------------
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TCAACCATGCCTTTTCTTGGAAG---------------------------------------------------------
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>reverse_1471
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------------------------------ATCTGTACAGCGAGTGCGAA------------------------------
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>forward_1254
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----------------------------------GCATAGAAACTGCGGAGGGA--------------------------
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>reverse_3125
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----AAGGAGAGGGAGCATGCAAC--------------------------------------------------------
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