>input_sequence_48433
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---------------------------------------------------ATGGCGGAGACGGTGCCGGCGACGGCGCT
GGACATCGACGAGATCCCCTTCGCCGACCTCCTCCTCCTGCTGCTCTCGCCGGAAGCGGCAGCAGCGGGCGACG------
---CCGATGGCCGGCGGCGCCGCCTCCTGGCCACCGTCTGGGCCGCGCTCGGCCCAGGCGGCACCGGGCTTCTGGCCGTC
TCCGGTGTCCCGCGCGCCGCCAACCTCCGCCGCCGGCTCCTCCCCCTGGCCCGCCGCCTCGCAATCATGGACCACCCTTC
CCGCGCCCACCTCCTCAAGGTAACCAACCCCTCCCTCTGTAGTCTCATCGTCTTCCTCCTCCCGCCCCCTGTTCCTCTTC
CCAAACTGCGATTGCAGTGCGGCGGCCGTGGATTGACAGTGATTTCCTTCAATGGGGATTTGATTCCATTGCAGAAGTAC
GGATTGGGCAGCGACGTGCCTCTTAAGAAGCCCGACAGGTCCGTCTCCTCCTTCGCGCGGCTCCTAAGG------CACGA
TTCAGGCAAGCTCCACTCCCTGGAGTCGATGTGCGAAGCCACCGGAGACACCGAGATCAGGCCTGGTTGTCCGGAC----
-----------------------GGGGAACAAAAGGGTGATGCTGATGATGAC---------------------------
ATGGAGAACCTTGGTGATCTTTTCAAGGAGCTGGGTCTGTGCATGATGGAGCTTGGCATCTTGGTTGCCCGGGCCTGCGA
CATTGTTATCGGTGGGAATCAGCTGGAGCAGAGCATTACCGACTCTGGAAGCGCAAAGGCGAGGCTCATCCACTACCACT
CTGAGTTGGATAACAGGATTATCAAGGAGATGAGCAGCACAAGGAGGAAAAACTTGGCAAACAATGCAGCAGCAG---CA
---AGACCTGTATCGGATCACATGGATACATATCAAATGCCAGGATCAGAAAGATCGAAAAAAGATGGGATGGCCGTTGT
AAAGTCAGCCGAAGAAAATGAGTCCCAAGGTGCCGCAGTACAAGGTCATGTCAGCACGATTTCTCTTGTGAACTTATGGC
AAGAGTGGCACTACGACTATGGAGTGCTGACAGTCTTAACAGCGCCATTATTCTTGCGCTCTGCTCTCGGACAGGAATGC
CCGGTCAGCGAAGAATGCTCTGTTCCTGATGGGCACTCACACCTGCAGCTCTTCAGTAAAAGGAGGATTTTCTCAGTGAG
ATGCTCCCAGGAGAGCTTTATTGTTCAGGTTGGGGAGGCAGCAGGCATCCTGTCAGGGGGGAAACTGAGATCTACGCTTC
ATGCTGTCAGTAGACCTTTAGGCTTGCCAAACATCAGCCGAGAGACTTTCGTGGTTTTCCTACAGCCGTCATGGGACAAA
ACTCTACCTTTCTCGGGTTACTCTTGTGCCGATGAAGATGA---TTCAAGTGATCACATGGAATTGGCTTTCAGGGGTGA
TGGACCAGCCGGGTGTTGTGGTGAACATATACTGATGCAGGAGATTCTGAAGAAGATCCCCCCGCTGTCGTCAAGGCTGA
AAGAAGGAATGACGTTTGCAGAGTTTTCTAGGCAGACAACAAAACAGTATTATGGTGGTGGAGGCATCCAACAAAACAGT
TAA-----------------------------------------------------------------------------
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>chr1A_1_TraesCS1A01G032600
AATGAGTTAGTTAGGGGATGACGCATTACGGAACGAGTAAAGAGACTTGCTGGTGATGATATTGAACTAGGTATGATGAT
ACCGACGATCGAATCTCGGACAAGTAACATACCGATGACAAAGGGAATAATGTATGTTGTTATGCGGTTTTG-ACCGATA
AAGATCTTCGTAGAATATGTAGG-AACCAATATGAGTATCCATGTTCCGCTATTGGTTATTGACCGGAGATGTGTCTCAG
TCATGTCTACATAGTTCCCGAAACCGCATGGTCCGCACGCTTAACGTTCGATGACGATTTGTATTATGAGTTATGTGATT
TGATGTACCAAAGTTTGTTCGGAGTCCCGGATGAGATCACAGACATGACGAGGAGTCTCGAAATGGTCAAAACATAAAGT
TTGATATATTGAAAGGTTATGTTTGGACACCAAAATGATTTCGGATAGGTTCGGACATTTTTCCGGAGTACCGGG-GGTT
ACCGAAA---CCC-CGGGGGGTTAATGGGCCTTCATGGGCCCTGGTGGAAGAGAGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNATTTGTCATATCTAAAACTTTGACGATAGCAGGATATTTGAGTCCCTAAAATTATGGTCAAAGTTCGAC
CCATAGTACAAGAGGCTTATAGAATGTTCCTAAACAAATGATGCGCATATATAAGTTTTTTTTTGAATCATTTATACGCG
GTTTCAAAAGATTCCTTCCTTGGAAGGAACTTGATTGATTTTTAAATTTAAACAAAGACTCAAAAAAGTCAAAGA----G
CAACACGCTGGGCCACCCTGGACTGGAAGGTTCCGGGCTCGAGCCCACACCATGGCGGAGACGGTGCCGGCGACGGCGCT
GGACATCGACGAGATCCCCTTCGCCGACCTCCTCCTCCTGCTGCTCTCGCCGGAAGCGGCAGCAGCGGGCGACG------
---CCGATGGCCGGCGGCGCCGCCTCCTGGCCACCGTCTGGGCCGCGCTCGGCCCAGGCGGCACCGGGCTTCTGGCCGTC
TCCGGTGTCCCGCGCGCCGCCAACCTCCGCCGCCGGCTCCTCCCCCTGGCCCGCCGCCTCGCAATCATGGACCACCCTTC
CCGCGCCCACCTCCTCAAGGTAACCAACCCCTCCCTCTGTAGTCTCATCGTCTTCCTCCTCCCGCCCCCTGTTCCTCTTC
CCAAACTGCGATTGCAGTGCGGCGGCCGTGGATTGACAGTGATTTCCTTCAATGGGGATTTGATTCCATTGCAGAAGTAC
GGATTGGGCAGCGACGTGCCTCTTAAGAAGCCCGACAGGTCCGTCTCCTCCTTCGCGCGGCTCCTAAGG------CACGA
TTCAGGCAAGCTCCACTCCCTGGAGTCGATGTGCGAAGCCACCGGAGACACCGAGATCAGGCCTGGTTGTCCGGAC----
-----------------------GGGGAACAAAAGGGTGATGCTGATGATGAC---------------------------
ATGGAGAACCTTGGTGATCTTTTCAAGGAGCTGGGTCTGTGCATGATGGAGCTTGGCATCTTGGTTGCCCGGGCCTGCGA
CATTGTTATCGGTGGGAATCAGCTGGAGCAGAGCATTACCGACTCTGGAAGCGCAAAGGCGAGGCTCATCCACTACCACT
CTGAGTTGGATAACAGGATTATCAAGGAGATGAGCAGCACAAGGAGGAAAAACTTGGCAAACAATGCAGCAGCAG---CA
---AGACCTGTATCGGATCACATGGATACATATCAAATGCCAGGATCAGAAAGATCGAAAAAAGATGGGATGGCCGTTGT
AAAGTCAGCCGAAGAAAATGAGTCCCAAGGTGCCGCAGTACAAGGTCATGTCAGCACGATTTCTCTTGTGAACTTATGGC
AAGAGTGGCACTACGACTATGGAGTGCTGACAGTCTTAACAGCGCCATTATTCTTGCGCTCTGCTCTCGGACAGGAATGC
CCGGTCAGCGAAGAATGCTCTGTTCCTGATGGGCACTCACACCTGCAGCTCTTCAGTAAAAGGAGGATTTTCTCAGTGAG
ATGCTCCCAGGAGAGCTTTATTGTTCAGGTTGGGGAGGCAGCAGGCATCCTGTCAGGGGGGAAACTGAGATCTACGCTTC
ATGCTGTCAGTAGACCTTTAGGCTTGCCAAACATCAGCCGAGAGACTTTCGTGGTTTTCCTACAGCCGTCATGGGACAAA
ACTCTACCTTTCTCGGGTTACTCTTGTGCCGATGAAGATGA---TTCAAGTGATCACATGGAATTGGCTTTCAGGGGTGA
TGGACCAGCCGGGTGTTGTGGTGAACATATACTGATGCAGGAGATTCTGAAGAAGATCCCCCCGCTGTCGTCAAGGCTGA
AAGAAGGAATGACGTTTGCAGAGTTTTCTAGGCAGACAACAAAACAGTATTATGGTGGTGGAGGCATCCAACAAAACAGT
TAACC-AGAAGACGTATGGTGATGGAAATGCATCTCATACAAACCGTAATGAAGTACTGAGTTCTACACC--GTATGTTG
AGAATCCACTCTGTAATTACTCCATGCCACAGTATGC-------------------------------------------
----------------------------------------ACTTTTT-ATCTTTGTTGATGGCTTATTTTCTCGTGCAGT
TGTGAAGTCACAG-------------------TGTTTCGACCTCAAAAGTGCTGGTTTCCAATAGTTCAAAGTT------
-----------------------------------------CTTGTGTTAGTAAGTTTAGCTTCCTAAACTGATATTGAT
GATAGAGATGTAAAA--------------------------------------------AATGCTTACTTGCTCAGTTGT
AAAAAATGTTAAATATTTCAAAACTATTGATGTG-TCTGCATTCTCAGTTTCTCTTTTT-CATTCTAAGACTGTTGGGTT
CCTAGTGTTGCATCAGATCC------------------------------------------------------------
AAGGTGTTAAAGTATCATATGATCGATATACAGTAGCAGGAAAGCATGTATCTCTCTGGTTCGTTGGTAGTTTTAGCTTC
CTAAACTGATATTGATGGTAGATATCTCACGTCAACGGAGGAAATCTGTCCAGCAATGGTTGGCAATTAGTCAACAAAAT
GCCCAGCTGCAAATGAAGTTAAATGTTTGAAAAC------------TCTACACTTTGCAGTATCCCCTTTTCTTTCTAAG
AC--TGCAGAGATCCGAATGGTGGGTTTGAACTCGAAGTCTTGTTAATTTTGTTCCAGATCAGAGGTGTTAAAA------
-----TCGGTATTCAGTAGCAGGAAAACC---CTCTGCTGTGCATGCTGGATAATAGTTTTCCCCTGTGAATCATTCAAT
TCCACTGTACATGACTTAAATATTCTCATGCCACATCGGTGCGGTATACAGTAGCAGGAAAACAAGATAAGCAGTGTGGT
CTATCTTGTTTTCCTCTGTTTTT-TTGAGCGAGGATGATCTATGTCTCTTGTAAAGTGCAGAGCTTGATTAATTGTCACC
GTGATTTCCTGCTGAATTATACCT-TTAACTCCTTTAAGTCAAACCATACGAGTATGTTTCATCGAA-GATGAATATGTG
GTATCTCTGCCTA
>chr1D_1
AATGAGTTAGTCACGGGATGATGCATTACAGAACGAGTAAAGAGACTTGTCGGTAATGAGATTGAACTAGGTATGATGAT
ACCTACGATCGAATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGTATTG-ACCGATA
AAGATCTTCGTAGAATATGTA-G-AACCAATATGAGCATCCAGGTTCCGCTATTGGTTATTGACCGCAGATGTGTCTCGG
TCATGTCTACATAGTTCTCGAACCCGTAGGGTCCGCACGCTTAACGTTAGATGACGATTTGTATTATGAGTTATATGATT
TGATGTACCAAAGTTTGTTCGGAGTCCCGGATGAGATCACGGACATGACGAGGAGTCTCGAAATGGTCGAGACATAAAGA
TTGATATATTGGAAGGTTATGTTTGGACACCAGAATGGTTTCGGATAGGTTCGGGCATTTTTC-GAAGTACCGGGGTATT
ACCGGAACCCCCC-CGGGGGGTTAATGGGCCTTCATGGGCCCTAGTGGAAGAGAG-------------------------
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>chr6D_1
AATGAGTTAGTTGCGGGATGATGCATTACGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAGGTATGATGAT
ACCGACGATCAAATCTCAGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGT-TTG-ACCGATA
AAGATCTTCGTAGAATATGTA-GGAGCCAATATGAGCATCCAGGTTCCGCTATTGGTTATTGACCGAAGATGTGTCTCGG
TCATGTCTACATAGTTCTCGAACCCGTAGGGTCCGCACGCTTAACGTTCAATGACGATTTGTATTATGAGTTATGTGATT
TGATGTACCGAAGTTTGTTCGGAGTCCCGGATGAGATCACGGACATGACAAGGAGTCTCGAAATGGTCGAGACATAAAGA
TTGATATATTGGAAGGTTATGTTTGGACACCAGAATGGTT-CAGAAAGGTTCGGGCATTTTCC-GGAGTACCGGGGG-TT
ACCGGAA-CCCCG-CGGGGAGTTAATGGGCCTTCATGGGCCCTAGTGGAGAGAG--------------------------
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>chr6D_1
AATGAGTTAGTTGCGGAATGATGCATTACGGAACGAGTAAAGAGACTTGTCGGTAACGAGATTGAACTAGGTATGATGAT
ACCGACGATCGAATCTCGGGCAAGTAACATACGGATGACAAAGGGAACAACGTATGTTGTTATGCGGT-TTG-ACCGATA
AAGATCTTCGTAGAATATGTA-GGAACCAATATGAGCATCTAGGTTCCGCTATTGGTTATTGACCGGAGATGTGTCTCGG
TCATGTCTACATAGTTCTCGAACCCGTAGGGTCCGCACGCTTAACGTTCGATGACGATTTGTATTATGAGTTATGTGATT
TGATGTACCGAAGTTTGTTCGGAGTCCCGAATGAGATCACAGACATGACGAGGAGTCTCGAAATGGTCGAGACATAAAGA
TTGTTATATTGAAAGGTTATGTTTGGACACCGGAATAGTTTCGAAAAGGTTCGGACATTTTCT-GGAGTACCGGGGGGTT
ACCGGAA-CCCCC-CGGGGGGTTAATGGGCCTTCATGGGCCCTTGAGGAGAGAG--------------------------
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>chr5D_1
AATGAGTTAGTCACGGGATGATGCATTACGAAACGAGTAAAGAGACTTGCCGGTAACGATATTGAACTAGGTATGATGAT
ACCAACGATCGAATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGT-TTG-ACCGATA
AAGATCTTCGTAGAATATGTA-GGAGCCAATATGAGCATCCAGGTTCCGCTATTGGTTGTTGACCGGAGATGTGTCTCGG
TCATGTCTACATAGTTCTCGAACCCGTAGGGTCCGCACGCTTAACGTTCGGTGACAATTTGTATTATGAGTTATGTGATT
TGATGAGCCAAAGTTTGTTCGGAGTCCCGGATGAGATCACAGACATGACGAGGAGTCTCTAAATGGTTGAGACATAAAGA
TTGATATATTGGAAGGTTATGTTTGGACACCGAAATGGTTTCGAAAAGGTTCGGACATTTTCC-AGAGTACCGGGGG-TT
ACCGGAA-ACCCC-CGGGGAGTTAATGGGCCTTCATGGGCCCTAGTGGAGAGAG--------------------------
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>chr6A_1
AATGAGTTAGCCACGGCATGATGCATTACGGAACGAGTAAAGAGACTTGCCGGTAATGAGATTGGACTAGGTATGATGAT
ACCGACGATCGAATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAATGTATGTTGTTATGCGGT-TTTAACCGATA
AAGATCTTCGTAGAATATGTA-GGAGCCAATATGAGAATCCAGGTTCCGGTATTGGTTATTGACCGAAGATGTGCCTCGG
TCATGTCTACATAGTTCTCGAACCCGTAGGGTCCGCACGCTTAATGTTCGATGACGATTTGTATTATGAGTTATGTGATT
TGATGAACCGAAGTTTGTTCGGAGTCCCGGATGAGATCACAGACATGACGAGGAGTCTCGAAATGGTCGAGACATAAAGA
TTGATATATTGGAAGGTTATGTTTGAACACCGGAATGGTTTCGGAAAGGTTCGGACATTTTTT-GGAGTACCGGGGGGTT
ACCGGGA-ACCTC-CGGGGGGTTAATGGGCCTTCATGGGCCCTAGTAGAAGAGAG-------------------------
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>chr6A_1
AATGAGTTAGTCATGGGATGCTGCATTACGGAATGAGTAAAGAGAGTTGCCAGTGATGAGATTGAACTAGGTATGATGAT
ACCGACGATCGAATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGT-TTTGGCTGATA
AAGATCTTTGTAGAATATGTA-GGAACCAATATGAGCATCCAGGTTCCGCTATTGGTTATTGACCGGAGATGTGTCTCGG
TCATGTCTACATAGTCCTCGAACCCATAGGGTCCGCACGCTTAACGTTCGATGATGATTTGTATTATGAGTTATGTGATT
TGATGTACCGAAGTTTGTTCGAAGTCCCGGATGAGATCACGGACATGACAAGGAGTCTTGAAATGGTCGAGACATAAAGA
TTGATATATTGGAAGGTTATGTTTGGACACCAAAATGGTTTCGGATAGGTTCGGACATTTTTC-GATGAACCGGGGGGGT
TACCGGA-ACCCC-TGGGGGGTTAATGGGCCTTCATGGGCCCTAGTGGAAGAGAG-------------------------
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>chr7D_1
AATGAGTTAGTTGCGGGATGATGCATTACGAAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAGGTATGATGAT
ACCGACGATCGAATCTCGGGCAAGTAACATACCGATGACAAAGGGAACAACGTATGTTGTTATGCGGT-TTG-ACCGATA
AAGATCTTCGTAGAATATGTA-GGAACCAATATGAGCATCCAGGTTCCACTATTGGTTATTGACTGGAGATGTGTCTTGG
TCATGTCTACATAGTTCTCGGACCCGTAGGGTCCGCACACTTAACGTTCGATGACGATTTGTATTATGAGTTATGTGATT
TGATGTACCGAAGTTTGTTCGGAATCCCGGATGAGATCACAGACATGACGAGGAGTCTCGAAATGGTCGAGACATAACGA
TTGATATATTGGAAGGTTGTGTTTGGACACCGGAATGGTTTCGGATAGGTTCGGACATTTTCC-GGAGTACCGGGGG-TT
ACCGGAA-CCCCCTCGGGGAGTTAATGGGCCTTCATGGGCCCTAGTGGAGAGAG--------------------------
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>chr7D_1
AATGAGTTAGTTACGGGATGATGCATTATGGAACGAGTAAAGAGACTTGCCGGTAACGAGATTGAACTAGGTATGATGAT
ACCGACGATCGAATCTCGGGGAAGTAACATACCGATGAAAAAGGGAACAATGTATGTTGTTATGCGGT-TTG-ACCGATA
AAGATCTTCGTAGAATATGTA-GGAACCAATATGAGCATCCAGGTTCCGCTATTGGTTATTGACTAGAGATGTGTCTCGG
TCATGTGTACATAGTTCTCGAACCTGTAGGGTCCGCACGCTTAACGTTCGATGACGATTTGTATTATGAGTTATGTGATT
TGATGTATCGAAGTTTGCTCGGAGTCCTGGATGAGATCACGGACATGACGAGGAGTCTCGAAATGGTCGAGACATAAAGA
TTGATATATTGGAAGGTTATGTTTAGACATCGAAATGGTTTCGGATAGGTTCAGGCATTTACC-GGAGTACCGGGGG-TT
ACCGAAA-CCCCC-CGGGGGGTTAATGGGCCTTCATGGGCCCTAGTGGAAGAGAG-------------------------
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>chr2D_1
AATGAGTTAGTTGCGGGATGATGCATTACGGAACGAGTAAAGAGACTTGCCAGTAACGAGATTGAACTAGGTATGGTGAT
ACCGACGATCGAATCTCGGGCAAGTAACATACCGATGACAAACGGAACAACGTATGTAGTTATGCGGT-TTG-ACCGATA
AAGATCTTCGTAGAATATGTA-GGAGCCAATATGAGCATCCAGGTTCCGCTATTGGTTATTGACCGGAGATGTGTCTCAG
TCATGTCTACATAGTTTTCGAACCCGTAGGGTCCGCACGCTTAACGTTCAATGACGATTTGTATTATGAGTGATGTGATT
TGATGAACTGAAGTTTGTTCGGAGTCCCGGATGAGATCACGGACATGACGAGGAGTCTCGAAATGGTCGAGACATAAAGA
TTGATATATTGGAAGGTTATGTTTGGACACCAGAATGGTTTCAGGAAGGTTTGGACATTTTTC-GGAGTACCGGGAGGTT
ACCGGAA---CCC-CGGGGGGTTAATGGGCCTTCATGGGCCCTAGTGGAGAGAG--------------------------
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>chrUn_725
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-----------ATTTGTCATATCTAAAACTTTGACGATAGCTGGATATTTGAG---------------------------
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------------TCCTTCCTTGGAAGGAACTTGATTGATTTTAAAATTTAAACATAGACTCAAAAAAGT-----------
---CACGCTGGGCCACCCTGGACTGGAAGGTTCCGGACCCGAGC-----CCATGGCGGAGACGGCGCCGGCGACGGCGCT
GGACATCGACGAGATCCCCTTCGCCGACCTCCTCCTCCTCCTGCTCTCGCCGGAAGCGGCAGCAGCGGGCGACGACAGCG
ACACCGATGGCCGGCGCCGCCGCCTCCTGGCCACCGTCTGGGCCGCGCTCGGCCCGGGCGGCGCCGGCCTGCTGGCCGTC
GCGGGCGTCCCGCGCGCCGCCGCCCTCCGCCGCCGTCTCCTCCCCCTGGCCCGCCGCCTCGCCCTAATGGACCACCCGTC
CCGTGCCCACCTCCTCAAGGTAACCAACCCCTCCCTCCGTAGTCTCATCGTCT---TCCTCCCGCCCCCTGTTCCTCTTC
CCAAACTGCGATTGACAGTGA--------------------ATTTCCTTCAATGGGGATTTGATTCCATTGCAGAAGCAC
GGATTGGGCAGCGACGTGCCTCTCAAGAAGCCCGACAGGTCCGTCTCCTCCTTGGCGCAGCTCCTAAGG------TATGA
TTCAGGCAAGCTCCACTCCTCAGAGTTTATGCGCGAAGCCACCGGAGACACCGAGATCAGGCCTGGTTGTCCGGAGGAGG
TACTGGAAGGTGCCGATGGATTTGGGGAGCACAATGGTGATGATGATGATGATGATGATGATGATGATGATGATCATGAT
ATTGAGAACCTTGGTGAGCTTTTCAAGGAGCTGGGTCTGTGCATGATGGAGCTTGGCATCTTGGTTGCGCGGGCTTGCGA
CATTGTTATCGGTGGGAATCAGCTGGAGCAGAGCATTACCGACTTTGGCAGCGCAAAGGCGAGGCTCATCCACTACCACT
CTGAGTTGGATAACAGGATTATCAAGGAGAGGAGCAGCACAAAGAGGAGAAGCTTGGCAAACAATGCAGCAGCAG---CA
GCAAGACGTTTATCGGATCACATGGATACAGGTCAAATGTCAGGATCAGAAGATGGATCCTGTATC--------------
-AAATCAGCAGAAGAAAATAGTTT---------------------------------GATTTCTCTTGTCAACTTATGGC
AAGAGTGGCACTACGATTACGGGGTGCTGACAGTCTTAACAGCGCCATTATTCTTGCGCTCTGCTCTCGGACAGGAATGC
CCGGCCAGCGAAGAATGCTCTCTTCCTGACGGGCACTCACACCTGCAGCTCTTCAATAAAAGGAGGATATTCTCAGTGAG
ATGCTCCCAGGAGAGCTTCATTGTTCAGGTTGGGGAGGCAGCAGGCATCCTGTCAGGGGGGAAGCTGAGATCCACGCTTC
ATGCTGTGAGTAGACCATTAGGCTTGCCAAACATCAGCCGAGAGACTTTCGTGGTTTTCCTACAGCCGTCATGGGACAAA
ACTCTACCTTTCTTGGGCTACTCTTCTGCCGATGAAGATGA---TTCAAGTGATCACATGGAATTGGCTTTCAGGGGTGA
TGGACCAGCCGGGTCTTGTAGTGAACATATATTGATGCAAGGAATTCTGAAGAAAATCCCCCCGCTGTCGTCAAGGCTGA
AAGAAGGCATGACGTTTGCAGAGTTTTCTAGGCAGACAACGAAACGGTATTATGGTGGTGGGGGCATCCAACAGAAGAGT
TAACC-AGAAGACGTATGGTGATGGAAATGCATCTCATACAAACCGTAATGAATTACTGAGTCCTACACC--GTATGCTG
AGAATCCACCCTGTAATTACTCCATGTCACAGTATGTACTCCCTCTGTAAACTAATATAAGAACATTTAGATCACTACTT
TAGTATTCTAAACGCTCTTATATTAGTTTACGGAGGGAGTACTTTTT-ATCTTCATTGATGGATTATTTTCTTCTGCAGT
TGTGAAGTCACAG-------------------TATTTCGACCTCAAAAGTGCTGGTTTCCGATAGTTTAAAGTT------
-----------------------------------------CTTGTGTTAGTAAGTTTAGCTTCCTAAACTGATATTGAT
GATAGAGATGTAAAA--------------------------------------------AATGCTTACTTGCTCAGTTGT
AAAAAATGTTAAATATTTGAAAACTATTGGTGTGCTCTGCATTCTCAGTTTCTCCTTTTCCATTCTAAGACTGTTGGGGT
CCTAGTGTTGCATCAGATCTGTTTAGTTCAACCACAAGGCACGTTTGAACTTGAAGCCTTCTTAATTTTATTCCACACCT
GAGGTGTTAAAGTAAGATATGATCGATATACTGTAGCAGGAAAACATGTATCTCTGTGGTTCGTTGATAATTTTAGCTTC
CTAAACTGATATTGTTGGTAGATATCTCACATCAACCGAGGAAATCTGTCGAGCAATGGTTGGCAATTAGTCAGCACAAT
GCCCAGCCACAAAAGAAATTAAATGTTTGAAAACTATTA-TGACATTCTACACTTTGCAGTATCTCCTTTTCTTTCTAAG
AC--T--AGAGATCCGAATGGTGGGTTTGAACTCGAAGTCTTCTTAATTTTGTTCCAGATCAGAGGTGTTAAAAGTAGGG
TATGATCGGTATTCAGTAGCAGGAAAACCCTTATCTGCTATGCATGCTGGAAAATAGTTTTCCACTGTGCATCACTTAAT
TCCACTCTACATGACTTAAATATTCTCATGCCACATCGGTGCGGTATACAGTAGCAGGAAAACAAGATAATCAGTGTGAT
CTATCTTGATTGCCTCTGTTTTT-GTGAGCGAGGATGATCTATATCTCTTGTAAAGTGCAGACCTCGATTCATTGTCACC
GCGATTTCCTGCTGAATTATACCT-TTAACACTTTTAAGTCAAACCATATGAGTATGTTTCATCAAAC-ATGAATATGTG
GTATCTCTGCCTA
>chr1B_916
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------------------------------------------TAAATTTAAACAAAGACTGAAAAAAGTCAAGGAAAGAG
CAACACGCTGGGCCACCCTGGACTGGAAGGTTCCGGGCTCGACCC--CACCATGGCGGAGACGGCGCCGGCGACGCCGCT
GGACATCCACGAGATCCCCTTCGCCGACCTCCTCCTCCTCCTGCTCTCGCCGGAAGCGGCAGCAGCGGGCGACG------
---CCGATGGCCGGCGGCGCCGCCTCCTGGCCACCGTCTGGGCCGCGCTCGGCCCGGGCGGCGCCGGCCTGCTGGCCGTC
TCCGGTGTCCCGCGCGCCGCCGCCCTCCGCCGCCGGCTCCTCCCCCTGGCCCGCCGCCTCGCCCTCATGGATAACCCTTC
CCGCGCCCGCCTCCTCAAGGTGACGAACCCCTCCCTCTGTAGTCTCATCTCCCTCCTCCTCCTGCC-------------C
CCAAACTGCGATTGCAGTGCGGCGGCCGTGGATTGATAGCGAT--------------------TTCCATTGCAGAAGCAC
GGATTGGGCAGCGACGTTCCCCTCAAGAAGCCCGACAGGTCCGTCTCCTCCTTCGCGCAGCTCCTAAGGCATGACCATGA
TTCAGGCAAGCTCCACTCCCCGGAGTCGACCACTGAAACCACCGGAGGCATGGAGGTAATCGCC----------------
--------GGTGTCGACGGATTTGGGGAGAACAAGGGTGGTGATGATGGTG------------------------ATGAT
ATTGAGAACCTTGGTGAGCTTTTCAAGGAGCTGGGTCTGTGCATGATGGAGCTTGGCATCTTGGTTGCCCGGGCCTGCGA
CATTGTTATCGGTGGCAATCAGCTGGAGCAGAGCATTACCGACTTTGGGAGCGCAAAGGCGAGGCTCATCCATTACCACT
CCGAGTTGGATAGCAGGATTATCAAGGAGAGGAGCAGCACAAAGAGGAAAAGCTTGGTAAATAATGCAGCAGCAGCAGCA
GCAAGACCTGTATCAGATCACATGGATACAGGTCAAATGCCAGGATCAGAAGATGGATCCTGTCTC--------------
-AAATCAGCAGAAGAAAATAGTTT---------------------------------TATTTCTCTTGTGAACTTATGGC
AAGAGTGGCACTACGACTACGGAGTGCTGACAGTCTTAACGGCGCCACTATTCTTGCGCTCTGCTCTCGGACAGGAATGC
CCGGTCAGCGAAGAATGCTCTCTTCCTGATGGGCACTCACACCTGCAGCTCTTCGATAAAAGGAGGATATTCTCGGTGAG
ATGCTCCCAGGAGAGCTTCATTGTTCAGGTTGGGGAGGCAGCAGGCATCCTGTCAAGGGGGAAGCTGAGATCTACGCTTC
ATGCTGTCAGTAGACCTTTAGGCTTGCCAAACATAAGCCGGGAGACTTTCGTAGTCTTCCTACAGCCGTCTTGGGACAAA
ACTCTGCCTTTCTCGGGTTACTCTTCTGCCGATGAAGAAGATGGTTCAAGTGATCACATGGAAT----------------
-----CAGCCGGGTCTTGTGGTGAACATACATTGATGCAAGAAATTCTGAAGAAAATCCCCCCGCTGTCGTCAAGGCTGA
AAGAAGGCATGACGTTTGCAGAGTTTTCTAGGCAGACAACGAAACGGTATTATGGTGGTGGAGGCATCCAACAGAACAGT
TAACCAAGAAGAAGCATGGCGATGGAAATGCATCTCATACAAACCGTAATGAAGTACTGAGTTCTACACCCTGTATGTTG
AGAATCCACTCTGTAATTACTCCATGTCACAGTATGC-------------------------------------------
----------------------------------------ACTTTTTTATCTTTGTTGATGGCTTATTTTCTTCTGCAGT
TGTGAAGTCACGGAGTTTTTAACAAGTACTTATATTTCGACCTCAAAATCGCTGGCTTCCAAAATTTGTTGGTCCGGTAG
TTTAAAGTTATAACTTCATTAAAACGAGCATTGCCCCTGTCCTTGTGTTGGTAAGTTTAGCTTCCTAAACTGATATTGAT
TATAGGGATCGCATCAACACAGGAGACCTCTCCAGTTATGATTGGCAATTAGTCAACACAATGCTCACTAGCTCAGTTGT
AAAAAATGTTAACTGTTTCAAAACTATTGTTGTGCTCCACATTCTCACTTTCTCTTTTTTCACTCCAAGACTGTTGGGTT
CCTAGTGTTGCATCAGATCAGCTTAGTTCAACCAGAAGACACGCTTGAATTTGAAGCCTTCTTAATTTTATTCCAGATCT
AAGGTGTTAAATTATGGTATGATCCATATACAGTAGCAGGAAACCATGTGCCTCTCTGGTTCCTTGGTAATTTTAGCTTC
CTATACTGATATTGATGGTAGAGATCTCACGTCGACAGAGGAAATCTGTCCAGCAATGGTTGGCAATTAGTCAACAC-AT
GCCCAGCTGGAAAAGAAGTTAAATGTTTGAAAAATATTATTGACATTCTACACTTTGCAGTATCTCCTTTTCTTTCTAAG
ACTGT--AGAGATCCGAATGGTGGGTTTGAACTCGAAGTCTACCTAATTTTGTTCCAGATCAGAGGTGTTAAAAGTAGGG
TA-------------------GGAAAACCCTTCTCTGCTGTGCATGCTGGATAATAGTTTTCCACTGTGAATCATTCAAC
TCCACTGTACATGACTTGAATATTCTCGTGCCACATTGGTGCGGTATACAGTAG----------------------TGAT
CTATCTTGTTTTCCTCTGTTTTTTGTGAGCGAGGGTGATCTACATCTCTTGTAAAGTGCAGACCTCGATTCATTGTCACC
GCGATTTCCTGCTGAATTATACCTTTTAACTCCTTTAAGTCAAACCATATGAGTATGTTTCATCAAAAGATGAATATGTG
GTATCTCTGCCTA
>chr1D_1991
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----------------------------------------------------------------------------TGGC
AAGAGTGGCACTATGACTATGGGGTGCTGACAGTCTTAACAGCGCCATTATTCTTGCGCTCTACTCTCGGACAAGAATTC
CCGGTCAGCGAAGAATGCTCTCTTCCTGATGGGCACTCACACCTGCAGCTCTTCAGTAAAAGGAGGGTATTCTCAGTGAG
ATGCTCCCAGGAGAGCTTCATTGTTTAGGTTGGGGAGGCAGCAGGCATCTTGTCATGGGGGAAACTGAGATCTACGCTTC
ATGCTGTCAGTAGACCATTAGGATTGCCAAACATCAGTCGGGAGACTTTCCTGGTTTGCAC-CAGCCGTCATGGGACAAA
ACTCTACCTTTCTCGGGTTACTCTTCTGCCGATGAAGATGA---TTCAAGTGATCACATGGAATTGGCCTCCAGGCATGA
TGGATCAGCCGGGTCTTGTGGTGAACATACATTGTTGCAGGAAATTCTGAAGAAAATCCCCCCGCTGTCGTCAAGGCTGA
AAGAAGGCATGACGTTTGCAGAGTTTTCTAGGCAGACAACGAAACGGTATTATGGTGGTGCAGGCATC------------
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>SNPs
-------------S-------S----------------------------S-----------------------------
-------------------S---------------------------S--------------------S-----------
---------------------S--------------S-----S-------------------------------------
-----------------S----S---S-S---------------------------------------------------
--------------------------------------------------------------------S-S--------S
-------------------------------------S-------------------------S----------------
-------------------------------------------S-----------SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS------------------------------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSS------------------------------------------------------------S-------
---------------------------------------------SS-----------------S---------------
---------------------------------------S----------------------------------------
-------------------------------------------------------S------S----S--S---------
---------------------SS---------------------------------------SS----------------
--------------------------------------------------------------------------------
------------------------------------S--S-------------------------------------S--
-----------------------S----------------------------------S------------------S--
--------------------S----------S-------------------------------------------S----
----------------------------S--S----------S---------S---------------------------
--S--------------S--------------------------------------------------------------
--------------------------------------------S---S-------------------------------
------------------------------S-----------S--------S----------------------------
------------------------------SS-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S--S-----S---------SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------S-----------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
--------------S----------------S----------S-----------S-------------------------
-------S--------------------------------S----S---------------------------S------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
------------------------------------------------------------------------SS------
---------------------------------S---------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-------------------S------------------------------------------------------------
---------------S---------------------------S-------------------------S----------
------------------------------------S---------------------------------------S---
-------------S--------------------------------------------------S---------------
-----SS-----------------------------------S-------------------------------------
---------------------------------------------------------------S----------------
----------------------------------------------------------------------S-------S-
------------------------S------------------S------------------S--S----S---------
-S-----------------------------------------------S--------------S---------------
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>forward_100
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ACCGACGATCGAATCTCGGA------------------------------------------------------------
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>reverse_2182
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---------------------GTTCCTGATGGGCACTCACA---------------------------------------
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>forward_2000
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------------------------------------------------------------AAAGATGGGATGGCCGTTGT
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>reverse_3526
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-----GCAGAGATCCGAATGGTGGG-------------------------------------------------------
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