>input_sequence_48424
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------ATGGACCTCGAGC
ATGGCAAGAAGCCCCCTGCCATCGCCGCTGCGGAGCTGTGCTCGCTCAAGGACAAGCTCGTCGGCCTGCGCCCGGTCCTG
CTGCGAGCGGCGGCGGTCCTGGCGACGGCGGTGGCCGCGGTGGTCATGGGGCTCAACAGGCAGTCCTACACTGCCGTGGT
GGCCATTGTGGGCACCAGGCCGCTCAGACAGACCTTCACTGCCAAGTTCAGCGACACGCCTGCGTTTGTGTAGGGCCCTC
CTTGCTTTGCTT-GCTTGCT----GC-CATTACCTGTGAAATTTACTGACATGTTGTCTCTGTGACGGTAAACCGTCGAT
TTTGCAGGTACTTTGTCATAGCCAATAGCATTGCCAGTCTGTATAACCTGGTGGTGCTGCTCCTCAGAAGGTGTATTGTC
CAGGGAAGGGCCCAGCATTTGGTAGTGCATAGGATGGACATGGTAATTTCTTTTCTC----TTAATCATAATTTACCGAC
TAAATGACACTTAAAATTATCTATAAGCTGGCCATTATTTACTCAAAGAA-AACCTCACGCAGTAGTAGTTTCACACTTT
CATCAGAGTAAGTACATTTGAACTGTTCCTCATAAACATATTTTAGTAGCGCGGATATCGAATAGATCTACGAGAGAAGC
AACCAACTCAATCTAAGAAAGTGTGTTGATCTTAAATGAAGTTTTCCCTACACAATCCAGGCAGATCTGACAAATTTGGA
GCCTTCTGTTGGTGCTACTATGAAAACACAGCACTCAATCTAATCAAGAATCTTCTT-----GCAACTATCCACAACCAG
TGGCTTGAGTGAAAAACTGCTGGTGCTGTGCTGCACTTGTATTGTAGACACC----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TAGTACTGTAGCATATCTGGCAA
A---------------------------CACATGATATTTTTTTCCTCCTCCTTGCACTTTCAGTGTCCCAAATAAGATA
ATCATGGTTGTACTGGCCATTACTTATACAAAACCTC----ATCCAGTAGTAGTGTCACACTTCCATCAGAGTATCTTTG
GACTGTTTCTCACAAAAATATTTTAGTGGAGTAACCAACTTAGAC----TAAGTGTATTGATCTTAAATTTAGATGCTCC
TACACAATCCAGGGATATCTGATAAGTTTCGAGCCTTATGACGGTGCTACTATAAAAACACAGCACTCGATCTAATCAAG
AATCTTTTTGCAACTATCCAGAACCAGTGGCTTGAGTGAAACTGCTGGTGCTGTACTTTGTATTGTAGGCACCTACTACT
GTGGCACATCTGGCAAATTTCAAACCAGTATTAACGGACGGCAACACATGATATATTTTCCTCCTTGTGCTGTCAATGTC
CCAGGTAATCATGGTTCTATTGGCCACCGGTGCCGCGACAGCGGCTTCGATGGCCGAGTTAGGCAAGAATGGTAACTTGC
ACACGCGTTGGAACCCGATATGCAACAAATTTGGTTCCTTCTGCAACCGTGGAGGTGTATCTCTCGTGTTCTCGTTTGTC
GGCGTTGCGCTCATGCTAGCCATGAACTTGCTCTCAGCTGCAGCCAACTCTCCCCGTGCCGTCGTCGCAGGCCAATGA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------
>chr5B_1_TraesCS5B01G054100
TTTGTATTGTACGTGTATTTGTAGTT---GGTATTTATACACCGTACCTGACATGGTACTGGGGCGAAGGGAACCGTAGA
GATAAAGTGCAATCATTCATGTTCAAGTCCATGTTTGCTCCGTAAAAAAAAGGACAGGCTGTGGTGTTGAAATGTTA-TT
TTCTGAATAATGTCCCTCTTACACAT-GCCATATATGTTGTGGTCAGTTAATAAGGAATGTGGTACATGCGTAATCACAA
AAGTGAAATATTAAAGTCAAACCTTTTTTATCTAAAAAAAC------TTTTTTTTGTATTATCGCAAACTGTTGACTGAA
AATCGGG-----ATGTTTGGGTACTTTAGA---------------AA----AATAGCTAGGAGCTCAGGCAAAAGAA---
---GAAATAAGACAAACGGGCGTCGAAAATGGAACGCTATACAAAAGTTAAATTTTC-----------------------
---------------------------------AAAAAAA---TTTGGGGTGAGAGAGGCTCGAACTCTCGACCTCAGGA
TCACTCACGTCTAGCTATGAGACCTACGCGCTAGCCAACTGCGCCACCACCCCTCTGGTGTTTTGCTGGTAATGTGAATT
TATTTATACATTAC-TAAATGTTAAACAAATCTTGTCTAAAAAGCAAGATCAAATC---ATATAGTTTCTCATGTTAGAT
GTACCTAACCAGGAAACTGGTATCCTCTCCCGGTGAAGTGTGCCACGGATTGCCCTCACTCCACGCTCCTCCTGTCATGA
TCGAGATGCAAACTCCTCTGCAAAAAAATGCTCTTCTTTGGCACTTCACTTTCTACCCGTATCACAAGTCTCAAACGACT
CTAAAAAGAAACATCTTTTCTTGACCGGCCACTCGAGCTTACTCGCGAAGTA--GAAACAAGGTAGCCCATAATTTACGG
TTTTGAGGTTTGGTAAGTCGCCCAAACTTGCAAGATCCGATCACCTCAAATTTGGGGTCACCATTATACCAGCATATAAT
CTCCCTTCCAAAAGCACCA-GCTCCGATCACCCCAAACCTCCCGACGTTCTTCTTCAGAGGCACCCAATGGACCTCGAGC
ATGGCAAGAAGCCCCCTGCCATCGCCGCTGCGGAGCTGTGCTCGCTCAAGGACAAGCTCGTCGGCCTGCGCCCGGTCCTG
CTGCGAGCGGCGGCGGTCCTGGCGACGGCGGTGGCCGCGGTGGTCATGGGGCTCAACAGGCAGTCCTACACTGCCGTGGT
GGCCATTGTGGGCACCAGGCCGCTCAGACAGACCTTCACTGCCAAGTTCAGCGACACGCCTGCGTTTGTGTAGGGCCCTC
CTTGCTTTGCTT-GCTTGCT----GC-CATTACCTGTGAAATTTACTGACATGTTGTCTCTGTGACGGTAAACCGTCGAT
TTTGCAGGTACTTTGTCATAGCCAATAGCATTGCCAGTCTGTATAACCTGGTGGTGCTGCTCCTCAGAAGGTGTATTGTC
CAGGGAAGGGCCCAGCATTTGGTAGTGCATAGGATGGACATGGTAATTTCTTTTCTC----TTAATCATAATTTACCGAC
TAAATGACACTTAAAATTATCTATAAGCTGGCCATTATTTACTCAAAGAA-AACCTCACGCAGTAGTAGTTTCACACTTT
CATCAGAGTAAGTACATTTGAACTGTTCCTCATAAACATATTTTAGTAGCGCGGATATCGAATAGATCTACGAGAGAAGC
AACCAACTCAATCTAAGAAAGTGTGTTGATCTTAAATGAAGTTTTCCCTACACAATCCAGGCAGATCTGACAAATTTGGA
GCCTTCTGTTGGTGCTACTATGAAAACACAGCACTCAATCTAATCAAGAATCTTCTT-----GCAACTATCCACAACCAG
TGGCTTGAGTGAAAAACTGCTGGTGCTGTGCTGCACTTGTATTGTAGACACC----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TAGTACTGTAGCATATCTGGCAA
A---------------------------CACATGATATTTTTTTCCTCCTCCTTGCACTTTCAGTGTCCCAAATAAGATA
ATCATGGTTGTACTGGCCATTACTTATACAAAACCTC----ATCCAGTAGTAGTGTCACACTTCCATCAGAGTATCTTTG
GACTGTTTCTCACAAAAATATTTTAGTGGAGTAACCAACTTAGAC----TAAGTGTATTGATCTTAAATTTAGATGCTCC
TACACAATCCAGGGATATCTGATAAGTTTCGAGCCTTATGACGGTGCTACTATAAAAACACAGCACTCGATCTAATCAAG
AATCTTTTTGCAACTATCCAGAACCAGTGGCTTGAGTGAAACTGCTGGTGCTGTACTTTGTATTGTAGGCACCTACTACT
GTGGCACATCTGGCAAATTTCAAACCAGTATTAACGGACGGCAACACATGATATATTTTCCTCCTTGTGCTGTCAATGTC
CCAGGTAATCATGGTTCTATTGGCCACCGGTGCCGCGACAGCGGCTTCGATGGCCGAGTTAGGCAAGAATGGTAACTTGC
ACACGCGTTGGAACCCGATATGCAACAAATTTGGTTCCTTCTGCAACCGTGGAGGTGTATCTCTCGTGTTCTCGTTTGTC
GGCGTTGCGCTCATGCTAGCCATGAACTTGCTCTCAGCTGCAGCCAACTCTCCCCGTGCCGTCGTCGCAGGCCAATGAGC
ACTAGTACCTCAGCTCAGACAGCTGATACCCAAGAGTACACTACACTGCTTATGTCACTGGGATGTGAAGTGATGTGAGC
CAGTATGGTTGCATGTGGGAGCTGGATCTCAGGAGGAAGTGTGCTCAAGGCTGCAAGTGTGCTGAATTTGGTGTACAACT
GTATATCACCTTGCCTGGCCTGAAATGTGCAGGCAGATAAGCCCTGGTTGGTTATGGGGCTTTAACTAGATCAGCTCTTA
CATTAGATCAAGTTGTTGCACCATTCAATTCTACTACTTTGTGGTTGTAAACCAGTACTCACAACTGTCCCGGCATTTGG
CCGCATTTGCTCAATTGGATGATACATCGCATCGTTCGAGAAGTATGTCTGGTGAGGTTTGGTCTTTCACAACAGTTTGT
ACCTGTTGTACTGCATGGAACCCTTGTTTTATTACCTGAATAGTGAAGTTGTTTGGAGTTGCTTGAAATGATGCATCCAG
CACCAGCCTTAGTTATGGACTTAATGGGGCAAAAATT-CAGGAGTTGGTCAGTTGATGTAGATTTATCGGAGAAGGAGCA
CATGCATGTGAGCCTACCAGGCATCTCCGCAAAAATTCAGTCAACATGCAACTAGGAGCTAAGTGATTACCACCGGTGCA
GCACATCAGCCTAACAATCTATGACAACCACAACCTAGTCATAATTCTGAGTTGCCATGGATTTTTCCTTTTAAAAAGAA
CTAGTATTAGGTGATAAAATTTGCATTATCTTCAGTTCAATTTAGTCTATACATTGGTAGTGATCCTTCTGTCTGCGTTT
AATATTATCTACTTAGCTTCAAGATCATTAAACTTTTCTGAAATTTGAGCGGTTTGAGTAAAAAATAACATAAAATTTGG
GACCATAAATCATGTGTTAATATGTTTAAAAGTAAATAAATCATGTGTAAAGATAAGAGCAGATAGGGTTACCTAGCAGC
TGCCTAGATTCACAGCTTGTCCTTTGTTTTTGTTTTTTT
>chr5A_1
TTTGTATCGTACGTGTATTTGTAGTTGTGGGTATTTATACACCGTACCTGACATGGTACTGGGCCAA--GGGACCGTAGA
GACGAAGTGCAATCATTCATGATCAAGTCCATGTTTGCTCTGTAAG--AAAGGACAGGCTGTGGTGTTGAAATGTTAATT
TTCTGAATAATGTTCCTCTTACACAACGCCATATATGTTGTGGTCAGTTAGTAAGGAATGTA---TATGCATGATCACAA
AAGTGAAATGTTATGTTTCAAATTCAAAC-----------------------TTATTATTATCGCAAATGGTCAACTGAA
AAATCGACCTCAATGTTTGGGTACTTTGGACCATAATTTAAACAAAA----AATAACTAGGAACTCAGACG---------
--------------------------AAATGGAACACCATACAAAAGTTAAATATTATATATGTATCTAAAACATA----
-TTTTGATGTTAGCACCAAGGAAATAAAAAAAAATCCAAAAGGTTTGGGGTGAGAGAGGCTCGAACTCTCGACCTCAGGA
TCACTCACGTTTAGCTATGAGACCTACGCGCTAGCCAACTGCGCCACCACCCCATTGGTGTTCTGCTACCAATGTAAAAC
TATTTATACATTCCTTAAATCTTAAAGAAATCTTGCCCAAAAAGCAAGGTCAAATC---ATATAATTTCTCATGTTAGAT
GTACCTAACCAGGAAACTAGTA-CCTCTCCCAGTGAAGTGTGCCACAGTTTGCCCTCACTTCACGCTCCCCCTGTCATAC
TCAAGATGCAAATTCCTCTACAA-AAAATGCTCTTCTGTGGCACTTCACTTTCCACCCGTATCACAAGTCTCAAACGACT
CTAAAAAGAAACATCTTTTCTTGA---------CGAGCTTACTCACGAAGTATAGAAACAAAGTAGCCCATAATTTACGG
TTTTGAGGTTTGGTAAGTCACCCAAACTTGCAAGATCCGATCACCTCAAATTTGGGATCACCATTATACCAGCATATAAT
CTCCCTCCCAAAAGCACCA-ACTCCGATCACCCCAGACCTCCTGAGGTTCTTCTTCACAGTCAACCAATGGACCTCGAGC
ATGGCAAGAAGCCCCCTGCCATTGCCGCCGCGGAGCTATGCTCGCTCAAGGACAAGCTCGTCGGCCTGCGGCCGGTCCTG
CTGCGAGCGGCGGCGGTCCTGGCGACGGCGGTGGCCGCGGTGGTCATGGGGCTCAACAGGCAGTCCTACACCGCGGTGGT
GGCCATTGTGGGCACCAGGCCGCTCACGCAGACCTTCACTGCCAAGTTCAGCGACACGCCTGCGTTTGTGTAGGGGACTC
CTTGCTTTGCTT-GCTTGCTTGCTGC-CATTACCTGTCGAATTTACTGACATGCTGTCTCTGTGACGGTAAACCGTCAAT
TTCGCAGGTGCTTTGTCATAGCCAATGGCATTGCCAGTCTGTATAACTTGGTGGTGCTGCTCACCAGAAGGTGCCTTGTG
CAGGGAAGGGCCCAGCATTTGGTAGTGCATAGGATGGACATGGTAATTTCTTTTTTCTCAATTAATAGTAATTTACCGAT
TAAATGACACTTAACATTATCTATAAGCTGACCATTATTTACTCAAAGAA-AACCTCACCCAGCAGTACTTTCACACTTT
CATCAGAGTAAGTAGACTTTAACTGCTCCTAATAAACATATTTTAGTAGATCGAATATCGAATACATCTACGAGAGAAGC
AACCAACTCAATCTAGGCAAGTGCATTGGTCTTAAATGAAGTTTTTCCTACACAATCCAGGAAGATCTGAAAATTTTGGA
GCCTTCTAATGGTGCTACTATGAAAACACAGCACTCAATCTAATCAAGAATCTTTTTTGCAAGCAACTATCCACAACCAG
TGGCTTGAGTGAAAAACTGTTG-----GTGCTGCACTTGTATTGTAGACACC----------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TAGTACTGTAGCATATCTGGCAA
ATCTCAAACCAGTGTCGATCGACGGCAACACATGATATA-TTTTCCTCGG------AATTTCAATGTCCCAAATAAGATA
ATCATGGTTCTACTGGCCATTACTTACACAAAACCTCGCTCATCCGGTAGTAGTTTCACACTTTCATCAGAGTATCTTTG
GACTGTTTCTCACAAAAATATTTTAATGGAGTAACCAACTTAGTCTAAGCAAGCGTATTGATCTTAAATTTAAATGCTCA
TACACAATCCAGGGATATCTGATAAATTTGGAGCCTTATGACGGTGGTACTATAAAAACACAGCACTCGATCTAATCAAG
AATCTTTTTGCAACTATCCAGAACCAGTGGCTTGAGTGAAACTGCTGGTGCTGTACTTTGTATTGTAGACAACTAGTACT
GTGGCACATCTGGCAAATTTCAAACCAGTATCAATGGACGGCAAGACATGATATATTTTCATCCTTGTACTGTCAATGTC
CCAGGTAATCATGGTTCTATTGGCCACCGGTGCCGCGACAGCGGCTTCGATGGCCGAGTTAGGCAAGAATGGTAACTTGC
ACACGCGTTGGAACCCGATATGCAACAAATTTGGTTCCTTCTGCAACCGTGGAGGCGTATCACTCGTGTCCTCATTCGTC
GGCGTCGCGCTCATGCTAGCCCTGAACTTGCTCTCAGCTGCAGCCACCTCTCCCCGTGGCATCGTCGCAGGCCAATGAGC
ACTAGTACCTCAGCTCAGACAGTCCATACCCAAGAGTACACT-----GCTCATGTCACTGGGATGTGAAGTGATGTGAGC
CAGTTTGGTTGCATGTGGGAGCTGGATCTCAGGAGGAAGTGTGCTCAAGGCTGCAAGTGTGCTAAATTTGGTCTACAACT
GTATATCACCTTGCCTGGTCTGAAATGTGCAGGCACATAAGCCCTGGTTGGTTATGGGGCTTTAACTAGATCAGCTCCTA
AATTAGATCAAGTTATTGCACCATTCAATTCTACTACTTTGTGGTTGTAAACCAGTACTCACAACTGTCCCGGCATTTGG
CCGCATTTGCTCAATTGGATGATACATTGCATCGTTCGACAAGTATGTCTGGTGAGGTTTGGTCTTTCACAACAGTTTGT
ACCTGTTGTACTGCATGGAACTCTTGTTTTATTACCTGAACAGTGAAGTTGTTTGGAGTTGCTTGAAATGATGCATCCAG
CACCAGCCTTAGTTGTGGACTTAATGAGGCAAAAATTTCAGGAGTTGGTCGGTTGATGTAGATTTATCGGAGAAGGAGCA
CATGCATGGTAGCCTATCAGGCATCTCCGGAAAAATTCAGTCAACATGCAACTAGGAGCTAAGTGATTACCACTGGTGCA
GCACATCAGCCTAACAATCTATTATTATCACAACCTAG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>chr5D_1
TTTGTATTGTACGTTTTGATGTAGTTG--GGTATTTATACACCGTATCTGACATGGTACTGGGCCAA--GGGACCGTAGA
GATAAAGTGCAATCATTCATGATCAAGTCCATGTTTGCTCTGTAAA--AAGGGACAGGGTGTGGTGTTGAAATGTT-ATT
TTCTGAATAATGTTCCTCTTACACAT-GCCATATATGTTGTGGTCAGTTAATAAGGAATGTAGTATATGCATAATCACAA
AAGTGAAATATTAAAGTCAAATC-TTTTTATGTAAAAAAAAGGTCAATTTTTTTTTCATTATCGCAAACTGTTAACTGAA
AATTGCG-----ATGTTTGGGTACTTTAGACCATAATTTAAACAAAATAATAATAACTAGGAACTCGGACAAAAGAATAT
AAAGAAATAAGACAAACGGGAGACGAAAATGGAACACTATACAAAATTTAAAATCTTATGAATATACGGAGTAGATCATA
TTTTTTATGTTAACACCAAGGACATTGAAAATTAAAAAAA---ATTGGGGTGAGAGAGGCTCGAACTCTCGACCTCAGGA
TCACTCACGTTTAGCTATGAGACCTACGCGCTAGCCAACTGCGCCACCACCCCTTCGGTGTTCTGCCTGCAATGTAAGCC
TATTTATATACGCGTTAAATGTTAAAGAAATCTTGTCCAATAAGTAAGATCATATACTTATATAATTTCTCACGTTAGAT
GTACCTAACCAGGAAACTGGCATCCTCTCCCGGTGAAGTGTGCCACAGTTTGCCCTCACTTCACGCTCCTCCTGTCATGC
TCGAGATGCAAATTCCTCTACAA-AAAATGCTCTTCTTTGGCACTTCACTTTCTACTCGTATCACAAGTCTCAAACGACT
CTAAAAAGAAACATCTTTGCTTGACCGGCCACTCGAGCTTACTCACGAAGTA--GAAACAAGGTAGCCCATAATTTACGG
TTTTGAGGTTTGGTAAGTCACCCAAACTTGCAAGATCTGATCACCTCAAATTTGGGATCACCAT--TAGCAGCATATAAT
CTTCCCCGAAAAGCCCCAGCATTCCAATCACCGCAAGCCTCCAAGG--TCTTCTTCCCAGTTAACCAATGGACCTCGAGC
ATGGCAAGAAGCCCCCTGCCATCGCCGCTGCGGAGCTATCCTCGCTCAAGGACAAGCTCGTCGGCCTGCGGCCGGTCCTG
CTGCGAGCGGCTGCGGTCCTGGCGACGGCGGTGGCCGCGGTGGTCATGGGGCTCAACAGGCAGTCCTACACCGCGGTGGT
GGCCATTGTGGGCACCAGGCCGCTCACGCAGACCTTCACTGCCAAGTTCAGCGACACGCCTGCGTTTGTGTAGGGGGCTC
CTTGCTTTGCTTTGCTTGCTTGCTTGTCATTGCCTGTTGAATTTACTGACATGTTGTCTCTGTGACGGTAAACCGTCGAT
TTCGCAGGTACTTTGTCATAGCCAATGGTGTTGCCAGTCTGTATAACCTGGTGGTGCTGCTCATCAGAAGGTGCCTTATG
CAGGGAAGGGCCCACAATTTGGTAGTGCATAGGATGGACATGGTAATTTATTTTCTC----TTAATCATAATTTACCGAC
TAAATGACACTT-----TATATATAAGTTGGCCATTATTTACTTAAAAGAGAACCTCGCCTTGTAGTAGTTTCCCACTTT
CATCAGAGTAAGTATATTTGAACTGTTCCTCATAAACATATTTTAGTAGAGCGAATATCGAATACATCTACCAGAGAAGC
AACCAACTCAATCTAAGCAAGTGCATTGGTCTTAAATGAAGTTTTTCCTACACAATCCAGGAAGATCTGAAAATTTTGGA
GCCTTCTAATGGTGCTACTATGAAAACACAGCACTCAATCTAATCAAGAATCTTTTTTGCAAGCTACTATCCACAACCAG
TGGCTTGAGTG-AAAACTGTTG-----GTGCTGCACTTGTATTGTACTCCCTCCGTTCCTAAATACTTGTCTTTCTAGGC
ATTTCAAATGACTATCACATACGGATGTATGTAGACATATTTTAGAGTGTAGATTCACTCATTTTACTCTGTATGTAGTC
ACTTGTTGAAATGCCTAGAAAGACAAGTATTTAGGAACGGAGGGAGTAGACACCTAGTAGTACTGTAGCATATCTGGCAA
ATCTCAAACCAGTGTTGATCGACGGCAACACATGATATA-TTTTCATCCTCCTTGTAATTTTAATGTCCCAAATAAGATA
ATCATTGTTCTACTGTCCATTACTTACACAAAACCTCGCTCGTCCAGTAGTAGTTTCCCATTTTCATCAGAGTATCTTTG
GACTGTTCCTCACAAAAATATTTTAGTGGAGTAACCAACTTAGTCTAAGTAAGTGTATTGATATTAAATTTAGATGCTCA
TACACAATCCAGGGAGATATGATAAATTTGGAGCCTTCTGATGGTGCTACTATAAAAACACAGCACTCAATCTAATCAAG
AATCTTTTTGCAACTATCCAGAACCAGTAGCTTGAGTGAAACTGCTGGTGCTGTACTTTGTATTGTAGACAACTAGTACT
GTGGCACATTTGGAAAATTTCAAACCAGTATCAATGGACGGCAACACATGATATATTTTCATCCTTGTACTGTCAATGTC
CCAGGTAATCATGGTTCTATTGGCCACCGGTGCCGCGACAGCGGCTTCAATGGCCGAGTTAGGCAAGAATGGTAACTTGC
ACACGCGTTGGAACCCGATATGCAACAAATTTGGTTCCTTCTGCAACCGTGGAGGCGTATCGCTCGTGTCCTCGTTCGTC
GGCGTCGCGCTCATGCTAGCCCTGAATTTGCTCTCAGCTGCAGCCACCTCTCCCCGTGCCGTCGTCGCAGGCCAATGAGC
ACTAGCACCTCAGCTCAGACAGCTCATACCCAAGAGTACACT-----GCTCATGTCACTGGGATGTGAAGTGATGTGAGC
CAGTATGGTTGCATGTGGGAGCTGGATCTCAGGAGGAAGTGTGCTCAAGGCTGCAAGTGTGCTAAATTTGGTGTACAACT
GTATATCACCTTGCCTGGTCTGAAATGTGCAGGCACATAAGCCCTGGTTGGTTATAGGGCTTTAACTAGATCAGCTCTTA
CATTAGATCAAGTTGTTGCACCATTCAATTCCACTACTTTGTGGTTGTAAACCAGTACTCACAACTGTCCCGGCATTTGG
CCGCATTTGCTCAACTGGATGATACATCGCATCGTTTGAGAAGTATGTCTGGTGAGGTTTGGTCTTTCACAACAGTTTGT
ACCTGTTGTACTGCATGGAACTCTTGTTTTATTACCTGAATAGTGAAGTTGTTTGGAGTTGCTTGAAATGATGCATCCAG
CACCAGACTTAGTTATGGACTTAATGGGGCAAAAATT-CAGGAGTTGGTCAGTTGATGTAGATTTATCGGAGAAGGAGCA
CATGCATGTGAGCCTATCTGGCATCTCCGGAAAAATTCAGTCAACATTCAACTAGGAGCTAAGTGATTACCACTGGTGCA
GCACATTAGCCTGAAAATCTATTATAGTCACAACCTAG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>SNPs
---------------------------------------------------------------S-S-SS--S--------
---------------------S------------------S-----SS--------------------------------
-------------S-----------------------------------------------S---S----S---------
---------------------S---------S--------S--------------S-----------------S------
---S---------------------------------------------------S------S-----S-----------
--------------------S-S------------S--------------------S-----------------------
--------------------------------------------------------------------------------
----------S-------------------------------------------S-------S----S-S-----S--SS
------------S-------------S----------S--------------------------S---------------
----------------------------------------------S-S-----------S------------------S
------------S------S---S--------------------------------------------------------
--------------------------------------------S-----------------------------------
-------------------S------------------------------------S-----------------------
------S-------------S---------------------S--S-----------S--S--S----------------
-------------------------------------S--------------------------------S---------
-----------------------------------------------------------------------S--S-----
--------------------------SS-----------------------------------------------SS---
-------------------------------------SS-----------------------------------------
--S-----------------------S-----------------------------------S----------SS----S
--------------------------------------------------------------------------------
--------------S--------------------------------------------S--------------------
--------------S----------------------------------S---S----------S---------------
-----------------S-----SS---S----------------S---------------S--------S--S------
-------SS---------------------------------------------S-------------------------
-------------------S--SSSSS-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------SS---------------S-S-----S----------------
---------S----------------S---------------------------S--------S----------------
-------------------------------------------S-----------------------------------S
-------------------------S---S--------------------------------------------------
--------------------------------------------------------------------S--S---S----
-------------------------------S--S-------------------------S-------S-----------
--------------------------------------------------------------------------------
-------------------------------------------------------S-----S-------S------S---
-----S---------------S------------------------S---------------------------------
------------------------S-----------------SSSSS---S-----------------------------
---------------------------------------------------------------S----------------
------------------S----------------S--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
----------------S------------S-------------------------------------------S------
----------------------S-S--S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_69
-------------------------------------------------GACATGGTACTGGGGCGAAG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>reverse_1357
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------CCTC
CTTGCTTTGCTTGCTT----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>forward_630
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------CCCTCTGGTGTTTTGCTGGT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>reverse_2592
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------TAACGGACGGCAACACATGA-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>forward_1398
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GCTTGCTGCCATTACCTGTG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------
>reverse_3457
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------CCAGGCATCTCCGCAAAAAT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
