>input_sequence_48412
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ATGAAAGGCGGTGT
TCTGCATAGGCTCCTTGTCAACAAGCTATGCTTGGGCCTTTTATTAGTTCTCCTCGTTGTGCCGATTGTCATTTTGTTGC
TGGGCACAACTCCAGAACAGCTGAAAGTTCTCTCCCAAGGTACACCCTCTCAAATAT-----------------------
--------------------------------------------------------------------------------
------AGTTT----TACTGTGCTAGC-TGTTACTTTGATTGCCGACTCAGAATCTCTCCATGCTCCTTTGGCTGAATTG
TTATCTGTGTCCCCCTTCCCGCATCAGGTTTCCTA-CAGCAGCCTGAACTGGAACATATTGGAGATAATGTATCAGCTCT
AGTTGTGCCTGCAGGTCCAGCTTATAACGACGACACTCACACGAGTATAACCAGACGGAACAAACAGAACAAAGGTTATG
ATTTTTAACATGTGCATTATGTGTTGGAAGTCTGAAGATTACTTTCTTATGCCTAATAGAGTGCTGTTGTTGCTTCGCAG
ACTGTAACTATGCAAAGGGAAAGTGGGTAGCAGATGAGAAACGGCCACTCTATTCAGGCAATGAGTGCAAGCAATGGCTG
TCGAAAATGTGGGCTTGTCGAATGATGCAACGCACAGATTTCTTCTATGAGAGTTACCGGTGGCAGCCGCACGGCTGTGA
GATGCCTGAGTTTTCAGGGCCTAACTTGTTGAGCAGGTATTGTGCTATTTTTAATTGTGCGTCACCTTACATACTGGACT
TCTTTCTAACATATTAGAATGCTTACAGGTTGAGGCATAAAACTCTTGCTTTTGTGGGTGATTCCCTCGGGAGACAGCAA
TTTCAGTCCATCATGTGTATAGCAACTGGTGGTAAATACAGCCCAGATGTTGAAGATGTTGGTTGGAAATATGGCCTTGT
CAAAGCTCCAGGTGCTTTAAGACCTGATGGGTGGGCTTATCGATTTCCAGAGACTAACACCACTATCCTTTACTACTGGT
CTGCTAGCCTATCTGAATTGGAACCTTTGAACACAACAAATTCAGTGACTAGCTATGCGTTGCATCTTGATCGGCCAGTA
ACATTCCTGAAGAAGTATTTCCATGGTTTTGATGTTCTAGTACTTAACACAGGTCATCACTGGAACAGAGGGAAATTCAG
TGGAAATCATTGGGAATTGTATGCCAATGGGGAGCCTGTAGGGAAAGGTAGACTTGCAGATCTCAACCGTGCAAAGAATC
TTACACTGTATAGCATTGCCAGGTGGGTGCATTCAGAACTCGCAAGCCGTCCTCAGATGAAAGCTTTTCTGAGGACAATG
TCACCGAGGCATTTTGTAAATGGCGATTGGAACACTGGTGGAAGTTGTGGTAATAGCGTTCCCTTTTCTAATGGAAGTGA
GGTCTTGCAGGATCATTCAAGTGACTTGCCTGCAGAGTGTGCTGTAAATGGAACTCAGGTTAAGCTTTTGGATATTACAG
CTATCTCACAATTACGAGATGAGGGGCACATCTCAAATCGTACTTTCAGAGCTCCAACAGGCATTCATGATTGCTTGCAC
TGGTGCCTTCCTGGTATACCAGATATGTGGAATGAGCTTCTCTTTGCACAGATTTAG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr5D_1_TraesCS5D01G210100
TGTGCATCTTGTGACAAAGGCGGTGTTGCAAACGAGTGTATGGGTAGGATTGCTACACGTCTCACGATCAAAATCTGATC
ATACCGCCATGGAGGCGGTTGACACGCGCCCAGTTATCAATCGGACGAAGCCAAGCATTTCCGAAAGAAAAATGTAGTAC
ACACTAAATAAAAAAAGGTATATATAATTAGCCTAAAAATCCCTGTTATAGTCCCACCGTTTCATAATTTGATAACACAT
TTTTGCAAGCTATATAAAACGTCTTATATTATCACCTTCAAAGAAAAAGTCTTGTATTATGCCCTCGGAGTCAAAATTCA
TATTTGACGGTTCCGTCTTCAGCATCGGGACCGTCCCATCTCCCGTGCGGCTGGACCGCTGGAGTGCCACCTTTCCCCTT
CCCCTCGCTCTCCCGGCCCCCCTCGCCCACCCTGCCGCCGTGCCGTACTTCTCCTCGGCGGCTCCCAGTCCTAATTACCT
CCCCGCCCGCGCACGACAGCGGCTCCCAGTAGC------CCCCCCTAGCCACCCCCGACGGCGAC-------TCCCACTA
CCCACCCTACCCACAGACCC-ATCCCCTTTCCACGCGCGTCGG--CCCCCATCGCCGTCCCAGTTCAACCTCACCGCGTC
CCCGCCGTCTGCACCCCGTCCACAATTTCGGCCATTGGATTCCGAGGTACGAGCATTCCG-CATCCATGATTAGCTAAAC
CCCACCCACGCGAGAAATTTTTGGGTGCGCCGGCCCGGTGTACACCC-GGCACACCATCTAGATCTGCCCGTGTTTGTTA
CGCGTTCTGGAAGGAACCCGGCCTCAGCTTTTGCGCGTTGCAGCTGGAAG--ATTGTTT--CACGAATTCGATATTTTCC
GACAATCATGTATGAACTGTT-TTCAGTAGCGGGCCTGACGATCGACTGTTCCCATGTGCAGAGATAATTTT-GGTGTGG
TCGATCGAGACCGAC--CTGAGTTTGCTTGGAGCAGCCTGGTGAGGTCTTATGCTGCCTTCTCAGGATGAAAGGCGGTGT
TCTGCATAGGCTCCTTGTCAACAAGCTATGCTTGGGCCTTTTATTAGTTCTCCTCGTTGTGCCGATTGTCATTTTGTTGC
TGGGCACAACTCCAGAACAGCTGAAAGTTCTCTCCCAAGGTACACCCTCTCAAATAT-----------------------
--------------------------------------------------------------------------------
------AGTTT----TACTGTGCTAGC-TGTTACTTTGATTGCCGACTCAGAATCTCTCCATGCTCCTTTGGCTGAATTG
TTATCTGTGTCCCCCTTCCCGCATCAGGTTTCCTA-CAGCAGCCTGAACTGGAACATATTGGAGATAATGTATCAGCTCT
AGTTGTGCCTGCAGGTCCAGCTTATAACGACGACACTCACACGAGTATAACCAGACGGAACAAACAGAACAAAGGTTATG
ATTTTTAACATGTGCATTATGTGTTGGAAGTCTGAAGATTACTTTCTTATGCCTAATAGAGTGCTGTTGTTGCTTCGCAG
ACTGTAACTATGCAAAGGGAAAGTGGGTAGCAGATGAGAAACGGCCACTCTATTCAGGCAATGAGTGCAAGCAATGGCTG
TCGAAAATGTGGGCTTGTCGAATGATGCAACGCACAGATTTCTTCTATGAGAGTTACCGGTGGCAGCCGCACGGCTGTGA
GATGCCTGAGTTTTCAGGGCCTAACTTGTTGAGCAGGTATTGTGCTATTTTTAATTGTGCGTCACCTTACATACTGGACT
TCTTTCTAACATATTAGAATGCTTACAGGTTGAGGCATAAAACTCTTGCTTTTGTGGGTGATTCCCTCGGGAGACAGCAA
TTTCAGTCCATCATGTGTATAGCAACTGGTGGTAAATACAGCCCAGATGTTGAAGATGTTGGTTGGAAATATGGCCTTGT
CAAAGCTCCAGGTGCTTTAAGACCTGATGGGTGGGCTTATCGATTTCCAGAGACTAACACCACTATCCTTTACTACTGGT
CTGCTAGCCTATCTGAATTGGAACCTTTGAACACAACAAATTCAGTGACTAGCTATGCGTTGCATCTTGATCGGCCAGTA
ACATTCCTGAAGAAGTATTTCCATGGTTTTGATGTTCTAGTACTTAACACAGGTCATCACTGGAACAGAGGGAAATTCAG
TGGAAATCATTGGGAATTGTATGCCAATGGGGAGCCTGTAGGGAAAGGTAGACTTGCAGATCTCAACCGTGCAAAGAATC
TTACACTGTATAGCATTGCCAGGTGGGTGCATTCAGAACTCGCAAGCCGTCCTCAGATGAAAGCTTTTCTGAGGACAATG
TCACCGAGGCATTTTGTAAATGGCGATTGGAACACTGGTGGAAGTTGTGGTAATAGCGTTCCCTTTTCTAATGGAAGTGA
GGTCTTGCAGGATCATTCAAGTGACTTGCCTGCAGAGTGTGCTGTAAATGGAACTCAGGTTAAGCTTTTGGATATTACAG
CTATCTCACAATTACGAGATGAGGGGCACATCTCAAATCGTACTTTCAGAGCTCCAACAGGCATTCATGATTGCTTGCAC
TGGTGCCTTCCTGGTATACCAGATATGTGGAATGAGCTTCTCTTTGCACAGATTTAGTACCTGTATACTGCACTTCAGTA
AGGGCATTTTCCTCCCAGAGGCCCAAGAATCTATTAATGTTCCTGCTGGTGGTCTGTACAGGGTGAACTGCTTTCTACCA
GTGTTATTTGTGAACCATCCATGCGCAGGCGATGTTTTTGGTCATCCATCCATGCGTAGGTGGTTAACGGTGTCAAGATG
ATAGCATTCTTTCCAGTGTATTTCTCTTCATATTCT-----TAGCCCCGTTTCAGACCAGATGCGGAATTAGCTGCTACA
GAGCC--ATGTGTAGTGCTCCCCAG-------GCACGTCAAACC---CTTTTCTTTTCTGTAAAATGCCACTATATTTCC
AGTTTACAATGTGCAGCATATATTCTGTAAAAATGTTCATACAAGTTGACCAAAG------------TTTTAGATTATAA
ATATAAAGTGGAACTTTTGGTTGAGTCTACA-TCCCCAAACCTCTTATCAGTGTGATTATCCAGTGTAATTGATTTATCT
TTCTGCACCGTACTACTTCCTTGATACTACATTTGTTCTCGAATAATCAAATGGCTCAGGCTTGCTCCAATCATGGGTGG
CTCGGGGCTGAGAAATACCATATGCAGTGATGTCAGTTTTTCAGGA-AAAGGATGAAAAGAACATAGTTATAAGCATTGA
ACTCAACCAAGCATCAATCTGAAGCTAGTAAGGATTTGGCAAAGCTTCCTTTTCATCATAGCTC----GGTTCAGATTGC
TAGCTTGTGGGATCAGGTGTGGAACTAGCTGAGTAAAATCGACGTTGAAGCTTTTATTTTTCTTTACTATAAAAATGGTA
CTCCCTGGATC-CATAATATAGCTTTTCTTTTTCTTTACTGTGAAAATGGACAGATTTGCATGTGCATCATATATTTTGT
ATGTAAGCTCATACAAGTAATACATAGTTTGACCAAAGTGCTATATGATCTTTTATACTGTATAACGTGGATCCTTCTTT
TTGTGAAACACGCATAAAAAGTGGAGCTTTTGGTTGATGTTTGTGCACAGTTT
>chr5A_290
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TCTTATATTATGCCCTCGGAGTCAAAATTCA
TATT-GACGGTCTCGTCTCCACCACC-GGACCGTCCCATCTCCCGTGCGGCTGGACCGCTGGAGTGCCACCTTTCCCCTT
CCCCTCGCTCTCCCGGGTCCCCTCCTCTACCCTGCCGCCGTGCCGTACTTCTCCTCGGCGGCTCCCAGTCCCAGTCGCTT
CCCCGCCCGCTCACCACAGCGGCTCCCAGTA------AGCCCCCCTAGCCACCCCCGACGGCGGTTCCCAAATCCCAATA
CCCACCCCACCAACAAACCCA-TCCGCATCCCCCTCGCGTCGCCCCCCCCATCGCCGTCCCAGTTCAACCTCATCGCGTA
CCCGCCGTCCGCACCCCGTCCACAATTTCGGCCATCGGATTCCGAGGTATGAGCATTTGGCCATCCATGGCTAGCTAAAC
CCCACCCGCGCGAGAAATTTTTGGGTACGCCGGCCCGGCGTACACCCGGGCACACCATCTAGATCTGCCCGTGTTTGTTA
CGCGCTCTGGAAGGAACCCGAGCTCAGCTTTTGCGCGTTGCAATTGGATGATTTTTTTT--CACGATTTCGATATTTC--
-ACAATCATGTATGAACTGTTCTTGAATAGCGGGCCT---GATCGACCGTTCTCGTGTGCAGAGATTGTTTTTGGTGCGG
TCGATCGAGACCGAAATCTGAGTTTGCTTGGCGGAGCCTGGTGAGGTCCTATGCTGCCTTCCCAGGATGAAAGGCGGTGT
TCTGCATAGGCTCCTTGTCAACAAGCTATGCTTGGGCCTTCTGTTAGTTCTCCTCGTTGTGCCGATTGTCATTTTGTTGC
TGGGCACAACTCCAGAACAGCTGAAAGTTCTCTCCCAAGGTACACCCTCTCAAATAC-----------------------
--------------------------------------------------------------------------------
------AGTAGTTGCTATTGTGCTAGCTTGTTGCTTTGATTGCCGACTCAGAATCTCTCCATGCTCCTTTGGCTGAATTG
TTATCTGTGTCCCCCTTCCCGCATCAGGTTTCCTA-CAGCAGCATGAACTGGAACATATTGGGGGTAATGTATCAGCTCT
AGTTGAGCCTGCAGGTCCAGCTTATAACGACGACACTCACACGAGTATAACCAGACGGAACAAATGGAACAAAGGTTATG
ATTTTTATCATGCCCATCATGTGTTGGGAGTCTGAAGATTACTTTCTTATGCCTAATAGAGTGCCATTGTTGCTTTGCAG
ATTGTAACTATGCAAAGGGTAAGTGGGTAGCAGATGAGAAACGGCCACTCTATTCAGGTAATGAGTGCAAGCAATGGCTG
TCAAAAATGTGGGCTTGTCGAATGATGCAACGCACGGATTTCTTCTATGAGAGTTACCGGTGGCAGCCGCACGGTTGTGA
GATGCCTGAGTTTTCAGGGCCTAACTTGTTGAGCAGGTATTGTGCTATTTTTAACTGTGCGTTAGCTTACATACTGGACT
TTTTTCTAACATATTGGAATGCTTACAGGCTGAGGCATAAAACTCTTGCTTTTGTGGGTGATTCCCTCGGGAGACAGCAA
TTTCAGTCCATCATGTGTATAGCAACAAGTGGTAAATACAGCCCAGATGTTGAAGATGTTGGTTGGAAATATGGCCTTGT
CAAAGCTCCAGGTGCTTTAAGACCTGATGGGTGGGCTTATCGATTTCCAGAGACTAACACCACTATCCTTTACTACTGGT
CTGCTAGCCTATCTGAATTGGAACCTTTGAACACAACAAAATCAGTAACTAGCTATGCGTTGCATCTTGATCGGCCTGTA
ACATTCCTGAAGAAGTATTTCCATGGTTTTGATGTTCTAGTACTTAACACAGGTCATCACTGGAACAGAGGGAAATTCAA
TGGAAATCACTGGGAATTGTATGCCAATGGGGAGCCTGTAGGGAAAGGTAGACTTGCAGATCTCAACCGTGCAAAGAATC
TTACACTGTATAGCATTGCCAGGTGGGTGGATTCAGAACTCGCAAGCCGTCCTCAGATGAAAGCTTTTCTGAGGACAATG
TCACCGAGGCATTTTGTAAATGGCGATTGGAACACTGGTGGAAGTTGTGGTAATAGCGTTCCCTTTTCTAATGGAAGCGA
GGTCTTGCAGGATCATTCAAGTGACTTGCCTGCAGAGTTTGCTGTAAATGGAACTCAGGTTAAGCTTTTGGATATTACTG
CTATCTCACAACTACGAGATGAGGGGCATATCTCAAATCGTACTTTCAGAGCTCCAACAGGCATTCATGATTGCTTGCAC
TGGTGCCTTCCTGGTATACCAGATATGTGGAATGAGCTCCTCTTTGCACAGATTTAGTACCTTTATACTGC-----AGTA
AGGGCATTTTTCTCCCAGAGGCCCAAGAATCTATTAGTGTTCCTGCTGGTGGTCTGTACAGGGTGAACTGCTTTCTACCA
GTGTTATTTGTGAACCATCCATGCGCAGGCGGTGTTTTTGGTCATCCATCCATGCCTAGGTGGTTAAAGGTGTCAAGATG
ATAGCATTCTTTCCAGTGTATTTCTTTTCAGA-TCT-----TAGCCCTGTTTCAGACCAGATGCGGAATTAGCTGCTACA
GAGCC--ATATGTAGTGCTCCCCAGCCCCAAGGCACGTCAAACC---TTTTTCTTTTCTGTAAAATGCCACTATAATTCC
AGTTTACAATGTGCAGCATATATTCTGTAAAAATGTTCATACAAGTTGACCAAACTGCTATATCTTCTTTTAGATTATAT
ATATAAAGTGGAACTTTTGGTTGAGTCTTATGTCCCCAAACCTCTTATCACTGTGATTATCCAGTGTAATTGATTTATCT
TTCAGCACCGTACTACTTCCTTGATACTACATTTGTTCTCGAATAATCAAATGGCTCGGGCTTGCTCCAATCATAGGTGG
TTCGGGGCTGAGAAATACCATATGCAGTGATGCCAGTTTTTGAGGA-GAAGGATGAAAAGAACATAGTTATAAGCATTGA
ACTTAACCAAGCATCAATCTGAAGCTAGTAAGGATTTGGCAAAGCTTCCTTTGCACCATAGCTC----GGTTCAGATTGC
TAGCTTGTGGGATCAGGTGTGGAACTAGCTGAGTAAAATCAACGTTGAAGCTTTTATTTTTCTGTACTATAAAAATGGTA
CTCCCTCGGATACATAATATAGCTTTTCTTTTTCTTTACTGTGAAAATGGACAGTTTTGCATGTGTATCACATATTTTGT
ATGTAAGCTCATACAAGTAATACACAGTTTGACCAAAGTGCTATATGATCTTCTA-----TATAACGTGGATCCTTCTTT
TTGTGAAACCCGCATAAAAAGTGGAGCTTTTGGTTGATA-TTGTGCACAATTT
>chr5B_298
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TATACCCTCGGAGTCAAAATTCA
TCTC-GACGGTTTCGTCTCCACCATC-GGACCGTCCCATCTCCCGTGCGGCTGGACCGCTGGAGTGCCACCTTTCCCCTT
CCCCTCGCTCTCCCGGGCCCCCTCGCCTGCCCTGCCGCCGTGCCGTACTTCTCCTCGGCGGCTCCCAGTCCCAATCGCCT
CCCCGCCCTCCCACGACAGCGGCTCCCAGTAGGCAGTAGCCCCCCTAGCCACCCCCGACGGCGAC-------TCCCACTA
TCCACCCCACCCACAAACCCAATCCCCATTCCACGCGCGTCGC--CCCCCATCGCCGTTCCACTTCAACCTCATCGCGTC
CCCGCCGTCTGCACTCCGTCCACAATTTCGGCTATCGGATTCCGAGGTACGAGCATTTCGTCATCCATGGTTAGCTAAAC
CCCACCCAAGCGAGAAATTTCTGGGTGCGCCGGCCCGGTGTACACCC-GGCACACCATCTAGATCTGCCCGTGTTTATTA
CGCGTTCTGGAAGGAACCCGACCTCAGCTTCTGCGCGTTGCAATTGGATG--AATTTTTTCCACGATTTCGATATTTC--
-ACAATCATGTATGAACTGTT-TTGAGTAGCGGGCCTGATTATCGACTGTTCCCATGTGCAGAGATAATTTT-GATGTGG
TCGATCGAGACCGAAATCTGAGTTTGCTTGGAGGAGCCTGGTGAGGTCCTATGCTGCCTTCGCAGGATGAAAGGCGGTGT
TCTGCATAGGCTCCTTGTCAACAAGCTATGCTTGGGCCTTTTATTAGTTCTCCTCGTTGTGCCGATTGTCATTTTGTTGC
TGGGCACAACTCCAGAACAGCTGAAACTTCTCTCCCAAGGTACACCCTCTCAAATACTCCCTCAGTCCGGAAATGCTTGT
CCTAGAAATGAATAAAATTGTTGTATCTATAACTAAAACAAGTCTAGATACAACCATTCCTAGGACAAGTATTTCCGGAC
GGAGGGAGTAGTTGCTATTGTGCTAGCTTGTTGCTTTGATTGCCGACTCAAAATCTCTCCATGCTCCTTTGGCTGAATTG
TTATCTGTGTCCCCCTTCCCGCATCAGGTTTCCTA-CAGCAGCATGGACTGGAACATATTGGAGATAATGTATCAGCTCT
AGTTGTGCCTGCAGGTCCAGCTTATAACGACGACACTCACACGAGTATAACCAGACGGAACAAATGGAACAAAGGTTATG
ATTTTTAACATGTGCATTATGTGTTGGAACTCTGAAGATTACTTTCTTATGCCTAATAGAGTGGTGTTGTTGCTTCGCAG
ACTGTAACTATGCAAAGGGAAAGTGGGTGGCAGATGAGAAACGGCCACTCTATTCAGGTAATGAGTGCAAGCAATGGCTG
TCCAAAATGTGGGCTTGTCGAATGATGCAACGCACAGATTTCTTCTATGAGAGTTACCGGTGGCAGCCGCACGGTTGTGA
GATGCCTGAGTTTTCAGGTCCTAACTTGTTGAGCAGGTATTGTGCTATTTTTAACTGTGCGTCAGCTTACATACTGGTC-
TTTTTCTAACATATTGGAATGCTTACAGGCTGAGGCATAAAACTCTTGCTTTTGTGGGTGATTCCCTCGGGAGACAGCAA
TTTCAGTCCATCATGTGTATAGCAACAGGTGGTAAATACAGCCCAGATGTTGAAGATGTTGGTTGGAAATATGGCCTTGT
CAAAGCTCCAGGTGCTTTGAGACCTGATGGGTGGGCTTATCGATTTCCAGAGACTAACACCACTATCCTTTACTACTGGT
CTGCTAGCCTATCTGAACTGGAACCTTTGAACACAACAAATTCAGTGACTAGCTATGCGTTGCATCTTGATCGGCCAGTA
ACATTCTTGAAGAAGTATTTCCATGGTTTTGATGTTCTAGTACTGAACACTGGTCATCACTGGAACAGAGGGAAATTCAA
TGGAAATCATTGGGAATTGTATGCCAATGGGGAGCCTGTAGGGAAAGGTCGACTTGCAGATCTCAACCGTGCAAAGAATC
TTACACTGTATAGCATTGCCAGGTGGGTGGATTCAGAACTCGCAAGCCGTCCTCAGATGAAAGCTTTTCTGAGGACAATG
TCACCGAGGCATTTTGTAAATGGCGATTGGAACACTGGTGGAAGTTGTGGTAATAGCGTTCCCTTTTCTAATGGAAGCGA
GGTCTTGCAGGATCATTCAAGTGACTTGCCTGCAGAGCGTGCTGTAAATGGAACTCAGGTTAAGCTTTTGGATATTACTT
CTACGTCACAACTACGAGATGAGGGGCACATCTCAAATCGTACTTTCAGAGCTCCAACAGGCATTCATGATTGCTTGCAC
TGGTGCCTTCCTGGTATACCAGATATGTGGAATGAGCTCCTCTTTGCACAGATTTAGTACCTGTATACTGCACTTGAGTA
AGGGCATTTTTCTCCCAGAGGCCCAAGAATCTATTAATGTTCCCGCTGGTGATCTGTACAGGGTGAACTGCTTTGTACCA
GTGTTATTTGTGAACCATCCATGCGCAGGCGGTGTTTTTGGTCATCCATCCATGCGTTGGTGGTTAACAGTGTCAAGATG
ATAGCATTCTTTACACTGTATTACAGTTGGTTTCAGATTCCTAGCCCCGTCTCAGACCAGATACGGTATTAGTTGCTACA
GAGCAATATATGTAGTGCTCCCCAG-------GCACGTCAAACCTTCCTTTTCTTTACTGTAAAATGCCATTA----TCC
AGTTCACAATGTGCAGCATATATTCTGTAAAAATGTTCATACAAATTGACCAAAGTGACATATGTTTTTCAGAT------
-TATAAAGTGGAACTTCTGGTTGATGTCTGT----------CTCTTATCCATGTGATTGTCCAGTGTAATTGATTTATCT
TTCAGCAGCGTACTACTTCCTTGGTACTACGTTTGTTCTCGAATAATCAAATGGCTCAGGCTTGCTACAAACATAGGTGG
TTCGGGGCTGACAAATGGCATATGCAGTGATGTCAGTTTTTCAGGAAAAAGGATGAAAAGAACATAGGAATAAGCATTGA
ACCTAACCAAGCATCAATCTGCAACTAGGTAGGATTTGGCAATGCTTCCTTTGCATCATACTAGCTTTGGTTCAGATTCC
TAGCTTCTGGGATTA-GTGTGGAATTAGCTGCGTAAAATCGACGTTGAAGCT----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>chr5A_540
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TCCCAATA
CCCACCCCACCCACAAACCCA-TCCGCCTCCCCCTCGCGTCGC--CCCCCATCGCCGTCCCAGTTCAACCTCACCATGTC
CCCGCCGTCTGCACCCTGTCCACAATTTCGGCCATTGGATTCCGAGGTATGAGCATTCCG-CATCCATGATTAGCTAAGC
CCCACCATCACGAGAAATTTTTGGGTGCGCCGGCCCGGTGTACACCC-GGCACACCATCTAGATCTGCCCGTGTTTGTTA
CGCGCTCTGGAAGGAACCCAAGCTCAGCTTTTGCGCGTTGCAATTGGATG--TTTTTTT--CACGATTTCGATATTTC--
-ACAATCATGTATGAACTGTTCTTGAATAGCGGGCCT---GATCGACCGTTCTCGTGTGCAAAGATAGTTTTTGGCGCGG
TCGATCGAGTCCGAAATCTGAGTTTGCTTGGCGGAGCGTGGTGAGGTCCTATGCTGCCTTCCCAGGATGTAAGGCGGTGT
TCTGCATAGGCTCCTTGTCAACAAGCTATGCCTGGGCCTTTTGTTAGTTCTCCTCGTTGTGCCGATTGTCATTTTGTTGC
TGGGCACAACTCCAGAACAGCTGAAAGTTCTCTCCCAAGGTACACCCTCTCAAATAC-----------------------
--------------------------------------------------------------------------------
------AGTAGTTGCTATTGTGCTAGCTAGTTGCTTTGATTGCCGACTCAGAATCTCTCCATGCTCCTTTGGTTGAATTG
TTATCTGTGTCCCCCTTCCCGCATCAGGTTTCCCTGCAGCAGCATGAACTGGAACATATTGGGGGTAATGTATCAGCTCT
AGTTGAGCCTGCAGGTCCAGCTTATAATGACGACAATCACACGAGTATAACCAGACGGAACAAATGGAACAAAGGTTATG
ATTTTTATCATGCCCATCATGTGTTGGGAGTCTGAAGATTACTTTCTTATGCCTAATAGAGTGTCGTTGTTGCTTTGCAG
ATTGTAACTATGCAAAGGGAAAGTGGG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--------------------------
----S-------S-----S--S----S-----------------------------------------------------
----------------S----------S-------------------------------------------S---SS---
----------S---------------------S-----------------------------------------------
-------S-------S-----------S--------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S---------------------SS----S------S----------S----------SSS
S-----------------------S--------------S----------------------------------------
--------------S------------------S--------------S------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
---------SS------S--------------S-----------------------------------------------
-------------------------------------------S------------------------------------
----------------------------------------------------------------SS--------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
--S-----------------------------------------------------------------------S-----
------------------------------------------------------S---------S---------------
-S-------------S-------------S--------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-----------------------------------------------------------------------------S--
------------------------------------------------------------------------------S-
-----------S--------------------------------------------------------------------
--------------------------------------S------------------------------------S----
----------S---------------------------------------------------------------------
-------------------------------S------------------------------------------------
-------------------------S------------------------------------------------------
---------S-----------------------------------------------------------------S----
-------------------------------------------------------------------------------S
----------------------------SSS-------------------S-----------------------------
---S----------------------------------------------------------------------S-----
S-------------------------------------------------------------------------------
---S------------------------------------------------S---------------------------
---------------------------------------------------------------S----------------
------S-SSS-------------------------------------------S----------S----S---------
------------------------S---------------------------S--SSSSS--------------------
---------S----------------------------SS---------S---
>forward_26
------TCTTGTGACAAAGGCGGTGT------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_1659
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CAATGAGTGCAAGCAATGGC--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_142
--------------------------------------------------------------------------------
------------------------------------------GGACGAAGCCAAGCATTTCC------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_1856
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------AGAATGCTTACAGGTTGAGGCA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>forward_1659
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AACGGCCACTCTATTCAGGC---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
>reverse_3281
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
CTCGGGGCTGAGAAATACCA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------
