>input_sequence_48406
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------------AGACCC--CCTCTCTCTCTCTGTGCGC------GCGCGCGCTCGT-----------------------
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------GCTCCCTCTTCCTGCTCTTCCTTCTGCTTGGCAGCCATGGCCAGCGCGCTATGCGGCGGCGGC---GGCAGCGT
GGCGGCGCCGTGCGGGGACTTGGGCGCCGCGGCGGCGCTCGCGGAGTCTTTGCCGATGGGCGCTGGGTACCGCTCCAAGA
GCTCCTTCCCCGCCGGGAGGGTGGCGCTGGCGGACAGGCCCCTGCCCCGGAGCCTCCAAGCGGCGGCCGCTGCTGGACAG
GTCGGTCCTTTCGTTCCAATCCGCGTTCTTGTTCCCTGTTCGAGATTTTCTAGACGAGATCTTGAGATTTCAGTTCCATT
TTATCTGTTCTGTGGGCTGAAATTTCTGTTTTGTTACTTTTTTTTTGTTTTATTAGTTTTAGTTTTTAGCTGGTGGGGAA
TACAATGCTGCAGACCTGCAGTGCTGGACGCGGACTAAATTAGAGCTGGTTGTTGGCTGCAGATGAACGGGAACCTGACG
ATTGGCAAGGCCATGAGGTGGTGGGAGAAGGTGACGCACCCCAACATGAGGGAGGTCGAGTCCGCGCAAGACCTCGCCTA
CTCCCTGCTCAACGCCGGCGACAAGCTCGTCGTCGTCGACTTCTTCTCCCCCGGCTGCGGTGGCTGCCGCGCTCTCCACC
CCAAGGTAGAAATTCTTGGCCAAAAGCCCCGGTTCGATCCAACAATTCTGATTCCAAACACTGCAAAGTATACTCAAGCG
AATTCGGTTCTTCTGA-TGTGCAGATTGCGCAGTTCGCTGAGCGGAATCCGGACGTGCTGTTCCTGCAAGTCAACTACGA
GAAGCACAAGTCCATGTGCTACAGCCTCCATGTCCATGTCCTCCCTTTCTTCAGGTTCTACAGGGGAGCTCAGGGCAGGG
TCAGCAGCTTCAGCTGCACCAATGCAACCGTAAGTCTCACTTGTATACTGTAAAACGTT-----TCTGCTTACTACAAAA
ATGTTCTTCATACACGTTTAAGATGAGATGAATGCTGACATGCTTGCTGCAATTCGATCCGATTACAGATCAAGAAGTTC
AAGGACGCCCTCGCAAAGCACTCGCCGGACAGGTGCAGCCTCGGCCCGGCACGGGGGCTCGAGGAGGCGGAGCTCTTGGC
TCTGGCTGCAAACAGGGACCTGGAATTCACCTACA---ACGAGAAGCCGACGCTGGTGCCGATCGCCGAGGCCATCCAAA
TGGAAGCTGCCTCCATTGGCGGCCCATGGATGCCATTGCCTGCGGCCGCGACGCAGCCTCTCACTCTGGGATCTGAGAAT
GGCTCGCTGATCCCCTCTGGAAGATAGTAACTCGAGACCAGGCCGAATCCGGCCATTTCTGTACAGATTTTCTTC-TTTT
GTTGTGTGTTGTATTGAATTCGAGAGGCAGAATCGCAGGCT-AAGGTTTTAG-TTTTTGTAAACCTGCCGAAGCTCTATT
GTGATCGTGTTGCTGCAACTAGCCGTTGCTCATCAATGCAATC---CTTGGTTTAATGAAACAATGGGATGATGCCTCCC
CAGAATTAA----GATCCTTCATGACT-----------------------------------------------------
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>chr2D_1_TraesCS2D01G100500
CTTTGAAAGCATCGTCTTGTGGCTCGAGGAGTCCCGATGGTACGGCACGAGTCGGTGTCGGCTACTGTTCTGGGGTGTGG
ACCTCTAAGGTGCAATGTACATAATAGTCGGCGCTCTCACGACGACACCTTCTCTAGGTCTGCCCAGGCC----------
----CTGACTTTCTCTTAACGCAATGGGTGGGAGTACATTAGTTTGTGTTGGCTTGGGGTCTTGGTCATGTTGTACAGGT
CTTCGGTGTTGATTGTAACATGGCTTGGTTGCTCCGTGTTTTTCATCATTGCTATTGGCACGAGCTGGATCTAGGTGTTG
CATGTATCGTACTACACGTTGGTTGGATGTGTGGCTGCTAATTCTAGTGATTATTATTGTCTTATGC-------------
---------------------------------------------------------------AAAATACAGTTACTGGT
TGAAAATGGCTCGCTGATTAGTATTGTCTTATATGTATGGTTACTGGTTGAAAATAGCCACGACTAGATTA---TACAGA
GAATATACTACATGCGCAAAAAATCTG---ACTTTTATCCAGTTACCAGTTTACCCCGCGGCAACTGTAAGATCT-GCTG
TAGACGAGCTGTGGTAACCGGCCAACAGCATGAATTTTCTCCATTTTTACCATGCTCCAACAGACTAGTGGGCCATGCGA
ACCACGCCCTTTTCGT---TGTGTGGTCCCACGCAGGCAGACACCGTGA---------------ACACGTGGCGCTTTAA
CCTCCAGTACCTACCG------------GCCCAGCCCTAATCTTATCCAAAACATATCCACTCCACCGCACCTTTTACAC
CGGCACAAACGGCCCGCCCCAACCGCCCCCACCTCGTGGCCGCCACCTCGCCGTCCGATGCATGATCCGACGGATGTCAA
GAATTCACCCCACGTGAAAGCCGTTC-GGGCGAAGACGGTAAAAAAAAGCGTGTGCCTTTTT-CGCTTTTC---CTCGCT
TCGTTAAAAGGGGCGGCGACCTTTTCTTCCTCGCCGCATCTCCCCATCCGCCATTGCCCTTGACTCGTGCTCCCTGCCTC
TCTTCTCCCCCGAGACCC--CCTCTCTCTCTCTGTGCGC------GCGCGCGCTCGT-----------------------
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------GCTCCCTCTTCCTGCTCTTCCTTCTGCTTGGCAGCCATGGCCAGCGCGCTATGCGGCGGCGGC---GGCAGCGT
GGCGGCGCCGTGCGGGGACTTGGGCGCCGCGGCGGCGCTCGCGGAGTCTTTGCCGATGGGCGCTGGGTACCGCTCCAAGA
GCTCCTTCCCCGCCGGGAGGGTGGCGCTGGCGGACAGGCCCCTGCCCCGGAGCCTCCAAGCGGCGGCCGCTGCTGGACAG
GTCGGTCCTTTCGTTCCAATCCGCGTTCTTGTTCCCTGTTCGAGATTTTCTAGACGAGATCTTGAGATTTCAGTTCCATT
TTATCTGTTCTGTGGGCTGAAATTTCTGTTTTGTTACTTTTTTTTTGTTTTATTAGTTTTAGTTTTTAGCTGGTGGGGAA
TACAATGCTGCAGACCTGCAGTGCTGGACGCGGACTAAATTAGAGCTGGTTGTTGGCTGCAGATGAACGGGAACCTGACG
ATTGGCAAGGCCATGAGGTGGTGGGAGAAGGTGACGCACCCCAACATGAGGGAGGTCGAGTCCGCGCAAGACCTCGCCTA
CTCCCTGCTCAACGCCGGCGACAAGCTCGTCGTCGTCGACTTCTTCTCCCCCGGCTGCGGTGGCTGCCGCGCTCTCCACC
CCAAGGTAGAAATTCTTGGCCAAAAGCCCCGGTTCGATCCAACAATTCTGATTCCAAACACTGCAAAGTATACTCAAGCG
AATTCGGTTCTTCTGA-TGTGCAGATTGCGCAGTTCGCTGAGCGGAATCCGGACGTGCTGTTCCTGCAAGTCAACTACGA
GAAGCACAAGTCCATGTGCTACAGCCTCCATGTCCATGTCCTCCCTTTCTTCAGGTTCTACAGGGGAGCTCAGGGCAGGG
TCAGCAGCTTCAGCTGCACCAATGCAACCGTAAGTCTCACTTGTATACTGTAAAACGTT-----TCTGCTTACTACAAAA
ATGTTCTTCATACACGTTTAAGATGAGATGAATGCTGACATGCTTGCTGCAATTCGATCCGATTACAGATCAAGAAGTTC
AAGGACGCCCTCGCAAAGCACTCGCCGGACAGGTGCAGCCTCGGCCCGGCACGGGGGCTCGAGGAGGCGGAGCTCTTGGC
TCTGGCTGCAAACAGGGACCTGGAATTCACCTACA---ACGAGAAGCCGACGCTGGTGCCGATCGCCGAGGCCATCCAAA
TGGAAGCTGCCTCCATTGGCGGCCCATGGATGCCATTGCCTGCGGCCGCGACGCAGCCTCTCACTCTGGGATCTGAGAAT
GGCTCGCTGATCCCCTCTGGAAGATAGTAACTCGAGACCAGGCCGAATCCGGCCATTTCTGTACAGATTTTCTTC-TTTT
GTTGTGTGTTGTATTGAATTCGAGAGGCAGAATCGCAGGCT-AAGGTTTTAG-TTTTTGTAAACCTGCCGAAGCTCTATT
GTGATCGTGTTGCTGCAACTAGCCGTTGCTCATCAATGCAATC---CTTGGTTTAATGAAACAATGGGATGATGCCTCCC
CAGAATTAA----GATCCTTCATGACTGATCATCTCCATGAATTC-----TAGTTGCTCTCTGTTCTTTCTCTGAGATTG
TTCTTTCTCCAAGATTT----AGGCGAAAAAATGCGGGTACTGAGGCCTAATGACAAGGTTGAGTGATTTTGAATCGGAT
CAGAGCTTTGATAACAGGATCG-------------------------CAAATCGTAGAATCTTCACTACCAGGACCGTAG
AAAAGTAGAATTTATGAACGATAATCGTAGAATCAAATGAGTTAGTTTTGGTTGTGATTCTGACAACCTTGTAATGAGAA
CTTTGAATCAGTGTGCTGGGTAAGCTTGACCCTCTTGAGAAGGATTTCTGTTGGCAGGTCACACTCATGTGGTTCAGCAT
GCGTGGGCGAAGTTTGTTCGGAAGAAGATCGAATTGGTGTTGCTGAGACGGAAGGCCCATAAAAGCTGTGATGTGCCGTT
GCATCAACCGGGCATGGTGACGATAAGCATTATTGGGGGCTTTGATGGTTGATGGATAAGGAAGGCGCCATCATCCTTGT
CGCCT-----------------CCACTGAAAACGAGCAAACGGTGTGTAGATGATGGTCGCG-CCCATGCGCTAACCGAT
ACGGTCGTTAGGAAGCTACAAGAATTGGTGTTGGAATCAGGCGCACAGTTGTATCGGGAATCGGGGATATCCT-----AG
CGTGTAGACTAGAAC-----------------------------------------------------------------
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---------------------------ATACGTACGTTGGATGAGATATTATCTCAACTGGTACAAG-AGAGCGGTCAGA
TGAGCTTATCCGGCTTGAAGTGCAGTGTCGACTTCTGATGCTTTTATGCTAAGTTAGATCATTGTGCATGCCGTGTACAG
AATTCAGAAGCATCCCTAATCTGACGGCTTGGATAAGGTTGGCTTAAGTT-GATCTGCAAGAAATCAAAATTC--AAGTA
ATGGAGTTAGACACCTTAAGCAATCGGTGGCACTCAGCAGGCCTA-CAAGCTGACAGCTTAAGCCTGCGATTCTGTACAC
GACATAACAACAAAAGGTGTCTAACTCTATTCGAGCAACTCTTGCAGACCCCTTATATCGC-------------------
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>chr2A_3
--TTGGAAGCGTCGTCTTGTGGCTCGAGGACCCCCGATGGTACGGCACGAGTCGGTGTCGGCTACTGTTCTGGGGCGTGG
GCCTCTGAGGCGCAATATACAACATAGTTGATGCTCTCAC----------TCTCTAGGTCTACCCAAGCCCTGCCATCCA
CCTACTGACTTTCTCTTGGCGCAATGGGTAACGGTTTGGTTTGTGTCGTCCTCA---GGTCTTGGTCATGTTATACAGGT
CTTCGGCGTTGATTGTGACACGGCTTGGTTGCTCTGTGTTTTGCATCATTGCTATTGGCACGAGCTTGATCTACGTGTTG
CATGTATTGTAGCACACGTGCGGG----GTGTGGCTGCTAATTCTACTGATTATTGTTGTAATGGCTAAAAGACGTTGTA
TCCGGGTTTTTTACTGCCTCTTCTCTAATGCAATGACATGCATGCTTATGCGTATTCTAGCAAAAAACACAGTTACAAAA
------------------------------ATATGTATGGTTACGAGTTGAAAACAGCCATGACTTGATTA---TACAGA
GAATATACAACATGCGCAAAAAATCTG---ACTTTTATCCAGTTACCAGTTTACCCCGCGGCAACTGCAAGATCT-GCTG
TAGAGGAGCTGTGGTAACCGGCCAACTGCTTGAGTTCTCTCCATTTTTACCATGCTCCAGCAGACGGGTGGGCCATGCGA
CCCACGCCCTTTTCCCC---GTGTGGCCCCACGTTGACAGACACCCTGACCTTGAACACCCTTCACACGTGGCGCTTTAA
CCTCCTCGTGAGGAGGCGCG-------------GCCCTAATCTTATCCAAAACATATCCACTCCACCGCACC--------
-GGCACAAACGGCCTGCCCCAACCGCCCCCACGTCGTGGCCGCCATCCCGCCGTCCGATGCCTGATCCGACGGACGACAC
GAATTCACCCCACGTGAAAGCCGTTCGGGGCGAAGACGGTAAAAAAAAGCGTGTGCCTTTTTTCGCTTTTC---CTCGCT
TCGTTAAAAGGGGCGGCGACCTTTTCTCCCTCGCCGCATCTCCCCATCCGCCATTGCCCTTGACNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNGCTCCCTCTTCCTGCTCTTCCTTCTGCTCGGCAGCCATGGCCAGCGCGCTATGCGGCGGCGGCAGCGGCAGCGT
GGCGGCGCCGTGCGGGGACTTGGGCGCCGCGGCGGCGCTCGCGGAGTCTTTGCCGATGGGCGCCGGGTACCGCGCCAAGA
GCTCCTTCCCCGCCGGGAGGGTGGCGCTGGCGGACAGGCCCCTGCGCCGGGGCCTCCAAGTGGCGGCGGCTGCTGGACAG
GTCGGTCCCTTCGTTCCAATCCGCGTTCTTGTTTACTGTTCGAGATTTTCGAGACGAGATCTTGAGATTTCAGTTCCATT
TTATCTTTTCTGTGGGCCGAAATTTCTATTT-GTTACATTTTTTAGTT----TTAGTTTTGGTTTTTAGCTGGTGGGGAA
TACAATGCTGCG--GC------GCTGGACGCGGACTAAATTAGAGCTGGTTGTTGGCTGCAGATGAACGGGAACCTGACG
ATTGGCAAGGCCATGAGGTGGTGGGAGAAGGTGACGCACCCCAATATGAGGGAGGTCGAGTCCGCGCAAGACCTCGCCGA
CTCCCTGCTCAACGCCGGCGACAAGCTCGTCGTCGTCGACTTCTTCTCCCCCGGCTGCGGTGGCTGCCGCGCTCTCCACC
CCAAGGTAGGAGTTCTTGGCCGAAACCCCCTGTTCCGTTCCGGCAATCTGATTCTG-AAACTGCGACGTATACTCAAGCG
AATTCGGTTGTTCCGA-TGTGCAGATTGCGCAGTTCGCTGAGCGGAATCCGGACGTGCTGTTCCTGCAAGTCAACTACGA
GAAGCACAAGTCCATGTGCTACAGCCTCCATGTCCATGTCCTCCCTTTCTTCAGGTTCTACAGGGGAGCCCAGGGCAGGG
TCAGCAGCTTCAGCTGCACAAATGCAACCGTAAGCCTCACTGATTATGTTTCTTCTTTTGTCCACTACAA------AAAT
ATGTTCTTCAGACACGTTTA-----AGATGAATGCTGACATGCTTGCTGCAATTCGTTCTGATTACAGATCAAGAAGTTC
AAGGACGCCCTCGCAAAGCACTCGCCGGACAGGTGCAGCCTCGGCCCGGCGCGGGGGCTCGAGGAGGCGGAGCTCTTGGC
TCTGGCGGCAAACAGGGACCTGGAATTCACCTACA---ACGAGAAGCCGACGCTGGTGCCGATCGCCGAGGCTATCCAGA
TGGAAGCTGCCTCCATTGGCGGCCCATGGATGCCATTGCCCGCGGCCGCGACGCAGCCGCTCACTCTGGGATCTGAGAAT
GGCTCGCTGATCCCCTCCGGAAGATAGTAACTCGAGACCAGGCCGAACCCGGCCATTTCTGTACAGATTTTCCTC-TTTT
GTTGTGTGTTGTATTGAGTTCGAGAGGCAGAATCGCAGGCT-AAGGTTTTAG-TTTTTGTAAACCTGCCGAAGCTCTATT
GTGATCGTGTTGCTGCAACCAGTCGTTGCTCATCATGGTAATC---CTTGCTTTAATG-AACAATGGGATGATGCCTCCC
CAGA-----------TCCTTCATGACCGACCATCTCCATGAATTC-----TAGTTACTCTCTTTTCTTTCTCTGAGATTG
TTCTTTCTCTGAGATTGTCGGAGGCGGAAAAATGTGGCTACTGAGGCCTAATGACAAGGTTGTGTGATTCTCAATAGGAT
TGGAGTTTTGATGGCAAGATCTTCACTACCAGGATCGGATTCTGAATCAAATCGTAGAATTTTCGCTACCAGGAATGTCG
AAAAGTATATTTTATGAACGAAAATCGTAGAATCAGAGGAGTTAGTTTGGATTGTGATTCTGACAACCTTGTAATGAGAA
CTTTGAATCTATGTGCTGGGTAAGCTTGATCCCCTTGAGAAGGGTTTCTGTTGGCAGGTCACACTCATGCGGCTCAGCAT
GCGTGGGCGAAGTTTGTTCGGAAGAAGATCGGCGTTGCTGAGAGGA-----AAGGCCCATAAAAGCTGTGATGTTCCGTT
GCATCAACCGAGCATGGTGACGATAAGCATTATTGGGGGCTTTGATGGTTGATGGATAAGGAAGGCACCATCATCCTTGT
CGCCTAGTTTCTACC---ATATCCACTGAAAATGAGCAAACGGTGTGTAGATGATGCTCATG-CCCATGCGCTAACCGAT
A-GGTCGTTAGGAAGCTACAAGAATTGGCGTTGGAATCAGGCTCACAGTTGCATAGGAAATCGGGGATATCCT-----AG
AGTATAGACTAGAAC-----------------------------------------------------------------
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---------------------------A----TACGTTGGATGAGATATTATCTCAACTGGTACAAAAAGAGCGGCCAGA
TGAGCTTATCCGGCTTGAAGTGCAGTGTCGACTTCTGATGCTTTT-GGCCAAGTTAGATCACT-----TGCCGTGTACAG
AATTAAGAAGCATCCCTAATCTGACAACTTGGATAAGGCTGGCTTAAGTT-AATCTGCAAGAGATCAAAATTC--AAGTA
ATGGAGTTAGACACCTTTAGCAATCGGTGGCACTCATCAGGCCTA-CAAGCTGACAGCTCAAGCCTGCGACTCTGTACAC
GACATAACAACAAAAGGTGTCTAACTCTATTAGAGCAACTCTAGCAGACCCCTTATATTGC-------------------
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>chr2B_446
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-------------------------------------------------------AGCCACGGCTAGACTGACGTACAGA
GAACACACCCCGTGTGCAGTAAAAGTCTGAACTTTTATCCAATTAC-----TACCACGCGGCATCCGCAAGATCTCGCTG
TAGACGAGCTGTGGTAACCGGCCAACAGATTGCGTTTTCTCCATTTTTACCATGCTCCAACAGACGGGTGGGCCATGCGA
TCCACGCCTTTTCCCTTTGTGTGTGGTCCCACGCCGGCAGACACCCTGACCTTGAACACCCTGCACACGTGGCGCTTTAA
CCTCCAGTACCTACCGCCTCGTGAGGAAGCCCAGCCCTAATCTTATCCAAAACATATCCACTCCACCGCACCTTTTACAC
CGGCACAAACGGCCTACCCCAACCGCCCCCGCCTCGTGGCCGCCACCTCGCCGTCCGATGCTTGATCCAACGGATGCCGA
GAATTCACCCCACGTGAAAGCCGTTCGGGCCAAGACGGTAAAAAAAAAGCGTGTGCCTTTTT-CGCTTTTTCCTCTCTCT
TCGTTAAAAGGG----CGACCTTTTCTTCCTCGCCGCATCTCCGCATCCGCCATTGCCCTTGACTCGTGCTCCCTGCCTC
TCTTCTCCCCCGAGACCTCGCCTCTCTCTCTCTCTCTCCCTCTGTGCGCGCGCTCCT-----------------------
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------GCTCTCTCTTCCTCCTCTTCCTTCTGCTTGGCAGCCATGGCCAACGCGCTATGCGGCGGCAGCAGCAA---CGT
GGCGGCGCCGTGCGGGGAATTTGGCCCCGGGGCGGCGCTCGCGGAGTCTTTGCCGATGGGCGCTGGGTACCGCGCCAAGA
GCTCCTTCCCCGCCGGGAGGGTGGCGCTGGCGGACAGGCCCCTGCCCCGGAGCCTCCAAGTGGCGGCCGCTGCTGGACAG
GTCGGTCCCTTGGTTTCAATCCGCTTTCTTGTTTACTGTTCGAGATTTTCTAGACGAGATCTTGAGATTTCAGTTCCATT
TTATCTTCTCTGTGGGCCGAAATTTCTA-------------TTTTGTT----GCATTTTTAGTTTTTAGCTGGTGGGGAA
TATACAGTGTTGTAGC------GCTGGACGCGGACTAAATTTGAGCTGGTTGTTGGCTGCAGATGAACGGGAACCTGACG
ATTGGCAAGGCCATGAGGTGGTGGGAGAAGGTGACGCACCCCAACATGAGGGAGGTCGAGTCCGCGCAAGACCTCGCCGA
CTCCCTGCTCAACGCCGGCGACAAGCTCGTCGTCGTCGACTTCTTCTCCCCCGGCTGCGGTGGCTGCCGTGCGCTCCACC
CCAAGGTAGAAATCCTTGGCCGAAAACCCCTGTTCGTTGCGACAA-TCTGACTCCAAACACTGTAACGTATGCTAAACAG
AAATTCGTTGGTTGTGGTGTGCAGATTGCGCAGTTCGCTGAGCGGAACCCGGACGTGCTGTTCCTGCAAGTCAACTACGA
GAAGCACAAGTCCATGTGCTACAGCCTCCATGTCCATGTCCTCCCTTTCTTCAGGTTCTACAGGGGAGCCCAGGGAAGGG
TCAGCAGCTTCAGCTGCACCAATGCAACCGTAAGTCTCACTTACACACTGTAAAAGATTGTGCGTCTGTTTTCTACGAAA
ATGTTCTTCAGGCACGTTTAAGAC-AGACGAACGCTGACATGCTTGCTGCAATCGCATCTGATTACAGATCAAGAAGTTC
AAGGACGCCCTCGCGAAGCACTCGCCGGACAGGTGCAGCCTCGGCCCGGCGCGGGGCCTCGAGGAGGCGGAGCTCTTGGC
TCTGGCTGCAAACAGGGACCTGGAATTCACCTACAACAACGAGAAGCCGTCGCTGGTGCCGATCGCCGAGGCCATCCAGA
TGGAAGCTGCCTCCATTGGCGGCCCATGGATGCCATTGCCTGCGGCCGCGACGCAGCCGCTCGCTCTGGGATCCGAGAAC
GGCTCGCTCATCCCCTCTGGAAGATAGTAATCGGAGACCAGGCCCAATCCGGCCATTCCTGTACAGATTTTCTTCTTTTT
GTTGTGTGTTGTGTTGAATTCGAGAGGCGGAATCGCAGGGTAAAGGTTTTAGTTTTTTGTAAACCTGCCGAAGCTCTATT
GTGATCGTGTTGCTGCAACCAGCCGTTGCTCAACATGGTAATCCTTCTTGCTTTAATG-ACAAATGGGATGATGCCTCCC
CAGAATTAATTAAGATCCTTCATGCCTGATCGTCTCCATGAATTCTACTGTAGTTACTCTCTGTTCTTTCTTTCTCCGAG
A-------------------------------------------------------------------------------
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--TTGCATCTGTGTGCTGGGTAAGCTTAACCCCCTTGTGAAGGGTTTCTGTTGGCAGGTCACACTCTTGCGGCTCAGCAT
GCGTGGGCGAAGTTTGTTCGGAAGAAGAGAAGATTGGTGTTGCTGGGACGGAAGGCCCATGAAAGCTGTGGTGTTCCGTT
GCATCAACCGGGCATGGTGACGATAAGCATTATTGGGGGCTTTGGTGGTTGATGGATAAGGAAGGCACCATCATCCTTGT
CGCCTAGTTTCTACTCCTATATCCACTGAAAACGAGCAAACGGTGTGTAGATGATGGCCATGCCCCATGCGCTAACCGAT
ACGGTCGTTAGGAAGCTACAAGAATTGGTGTTGGAATTAGGCGCACAGTTGCATAGGAAATCGGGGATATCCTTCCTTAG
AGTATAGACTAGACCATACACTACTAGGAAAAGGGCTATAGATGGAAATGACACTAATGGCGCACCAGTCATGTGGTGCG
CCATTAGTATATACTAATGGCGCACCACCTTCTGATGCGCCATTAGTGTTGAAACTACTAATGGCGCACCTTGCCCACGG
TGCGCCATTAGTATCCAATTTTTGTTTTTTTGAACTAGTGCGCCTGTCCAAACATACTAATGGCGCACCGTGGCATGGTG
CGCCATTACTAGTTAAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAGTAACCTTGGCCACCACTTCCACCGAATGCACCCC
CCTGGATCGCCTTTTCAGTTTTTAAAAAAATAAAAGAAAATGATAAAAATGTCAAAAAAGAAAAGAAAATAAGTTTCCCA
TGTGATATGTGGCCTAGTTGCTGGGAAAATTTGCAAATATGAATTTTGACTTCGTTTACAAAATCTCGCGAGAATTTGTA
AAAATGGGCATAACTTTTGCATACTAACTCGGATGAAAAAGTTTTTTATATGAAAAATCATCTACTCGAAAAGTTACATC
CAAATTTAACTGGGGGAACCCCGTTAAACATTTTCAAAATCCTCAAAAACCTAACAGAAAAAAAAGATACGGGGCTTTTA
AGATCTAGAGAGGCAAAAAAAAAATCAAACTTACTAATGGCGCACCTACCCACGGTGCGCCATTACTATCTTCCCGCCTT
CAAAATTCAAAATAAATCAAAAAAATAAAAAAAAGTTACTAATGGCGCACCTGACCATGGTGCGCCATTAGTATCTTCCC
TCCTTCAAAATTCAAAATAAGTCAAAAAAATAAAAAAACAATTACTAATGGCGCACCTGCCCGTGGTGCGCCATTAGTAT
CTTCCCGCCTTCAAAATTCAAAATAAATCAAAAAAATAATTTTTTTACTAATGGCGCACCTGCCCGCGGTGCGCCATTAG
TATGCCGTATATATGGCTGGTCCTCTCCTCCTCTCTTCATTTCATCTTCCCTTCTCTCCTCCACCATACTTCTCCTNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCGCCATTAGTATACCAGATACTAATGGCGCACCACTGG
TGCGCCATTAGTAAAAATTACTAATGGCGTGCTGTTAGTGGCGCACCACAGATGCGCCATTAATGGCCATACTAGGTGCG
CCATTAGTAGGGGTTTTTCTAGTAGTGA----TACGTCGGATGAGATATTATCTCAACTGGTACAAG-AGAGCGGCCAGA
TGAGCTTATCCGGCTTAAAGTGCAGTGTCGACTTCTGATGCTTTT-TGCTAAGTTAGATCATCATGCATGTCGTGCACAG
AATTCAGAAGCATCCCTAATCTGACGACTTGGAAAAGGTTGGCTTAAGTTAAATCTGCAAGAAATCAAAATTCTCAAGTA
ATGGTGTTAGACACCTTAAGCAATCAGTCGCACTCAGCAGGCCTATCAAGCTGACAGCTTAAGCTTGCGACTCTGTACAC
GACATAACAACAAAAGGTGTCTGACTCTATTAGGAGTAGTAGCAAGTTGTGCTTAACCATGAAAGCCTTGCTTGACGGTC
GGACCTCTATGCTTCATTTTTCCTTTACGAATTGACCGTCAGTGTTGGGGATCGTTGTAGAAAATAAAAAATTTCTACGC
ATCACCAAGATCAATCTATGGAGTAACTAGCAACGAGAGAGAGAGGAGTGCATCTTCATACCCTTGAAGACCGCGAGACG
GAAGCGTTACAAGAACGCGGATGAGGGAGTCGTACTCGAAGCGATTCAGATCGCGGTGGATTCCGATCTTAGCGCCGAAC
AACGGCACCTCCGCGTTCAACACACATGCAACCTGGTGACGTCTCCCGCGCCTTGATCCAGCAAGGAGGAGGGAGTGATT
GAGGAAGAGGGCTCCAACAGCAGCAAGACGGCGTGATGGTGATGGAGAGGCAGTACTCCGGCAAGGCTTCGCCAAGCTCT
TGCGGAGGAGAGAGGTGTTGGGGAGGGGATGGGCTGCGCCTTAGGTGTGGTGCTGCAGCCCTCCGCTCGCCCCTCTATTT
ATAGGAGAAGGGGGAAGGGAGCCGGCCCCCTCTAGATGAGATCTAGAGGGGGGGGCCAAGGGGAGGGGGCTTGCCCCCCA
AGCAAGGGGGCGCCCCCTTTAGGGTCCCCCCAACCCTAGGCGCATGGGCCCAAGGGGGGATGCGCCCAGCCCTCCAAGGG
CTGGTTCCCTTCCCACTACGGCCCATGAGGCCCTCTGAGAGAGGTGGCCCCTCCCGGTGGACCCCCGGAACCCCTCCGAT
GGCCCCGATACAATACCGGTTGCCCCCTAACTTTTCCGGTGTGCTGGGTAAGCTTGACCCCCTTGAGAAGGGTTTCTGTT
GGCAGGTCACACTCATGCGGCTTAACATGCGTACGTGGGCGAAGTTTGTTCGGAGGAAGATTGGTGTTGCTGGGACGGAA
GGCCCATGAAAGCTGTGATGTTCCGTTGCATCAACCGGGCATGGTGACGATAAGCATTATTGGGGGCTTTGGTGGTTGAT
GGATAAGGAAGGCACCATCATCCTTGTCGCCTAGTTTCTACTCCTATATCCACTGAAAACGAGCAAACGGTGTGTAGATG
ATGGCCATGCTCATGCGCTAACCGATACGTCGTTAGGAAGCTACAAGAATTGGTGTTGGAATCAGGCGCCCACAGTTGCA
TAGGAAATCGGGGATATCCTTCCTAGAGTATAGACTAGACCATACGTTGGATGAGATATTATCTCAACTGGTACATGAGA
GCGGACAGATGAGCTTATCCGGCTTGAAGTGCAGTGTCGACTTCTGATGCTTTTTCTAAGTTTGATCATTGTGCATGCCG
TGCACAGAATTCAAAAGCATCCCTAATCTGACGACTTGGATAAGGTTGGGTTAAGTTAGTCTGCAAAAAATCAAAATTCA
AGCAATAGAGTTAGACGCCTTAAGCAATCAGTAGCATTCTGCGGC
>SNPs
SS---S----S-------------------SS-------------------------------------------S----
S-----S---S-----S----SS-----S-SS--------SSSSSSSSSS-----------S----S-------------
-----------------SS----------SSSS--SSSS-SSS-SSS--SSS-SSSS---------------S-------
------S---------S---S-------------S-------S-----------------------S------S------
-------S---SS------SS-SSSSSS------------------S--------S----SS-SSSS-------------
-------------------------------------------------------------------S--------SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------SS--------S-------------------------
--------S----------------------------------------------------------S------------
-----------------------------S---S-------------------------------SS-------------
S-------------S-------------------S----------S----------------------------------
--------------------------------------------------------------------------------
--------------S----------------------------------------------S--------------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S---------------S-SSS-----------------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
------------------------------------------------------------S-------------------
--------S------------------------SS---------------------------------------------
------S----------S---------S---S-----S-------SS-SSSS----------------------------
-----------SS-S-SSSSSS----------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
---------------------S---S----S-----S-S-S----S--------------------S-------------
---------S---S------------------------------------------------------------------
---------------------------------------------------------------------S----------
------------------------------------------S--S---------SS-----------S--S--------
----------S------------SS----------------------------------S--------------------
--------------------------------------------------S-----------------------------
------------------------------------------------------------------------------S-
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S---------------SS-S-----------S-------S---------------------
-------------------------------------------------------S------------------------
---------SS-----S---------S-------S--S------------------------S------S-S---S----
SS---S------SS--S----S--------------------------------------S---S---------SS--S-
-------S-S-----------S-------------S-S----------S-S-----------------------------
---------S----------------------S----------S-------------------------S--S-------
-------------------------------S------------------------------------------S-----
------------------------------------------------------------------S-------------
-----------------------------------------------------------SS-------------------
---------------------------------------------------S--S--S----------------------
S--S----------------------------------------------------------------------------
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----------------------------SSSS-------------------------------------------S----
---------------------------------------------S-----------------S----------------
--------------------------S------------------------S----------------------------
----------------------------------------------------------------------S---------
-------------------------------S----------S---------------S---------------------
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>forward_199
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-------------------CGCAATGGGTGGGAGTACAT-----------------------------------------
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>reverse_1689
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--------TTTCGTTCCAATCCGCGTTC----------------------------------------------------
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>forward_674
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--------------TAACCGGCCAACAGCATGAA----------------------------------------------
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>reverse_2174
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-------------TGATGTGCAGATTGCGCAGT-----------------------------------------------
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>forward_1715
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---------------CCAATCCGCGTTCTTGTTCC---------------------------------------------
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>reverse_3075
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----------------------------------CGGGTACTGAGGCCTAATGAC-------------------------
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---------------------------------------------
