>input_sequence_48387
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------ATGGACGCCTCGGCCGAGC
TGCAGCGGTTCATCGAGGTGAGAGCTCCCTCGGCGCAGCTTCCCCTCAATCGATTTCAAAATTTCTCGAGCCCCGCCCGA
AGCACGCGCCGTCCCGGCCGCCGCTGGCCTTCGGATTTCCGAGCCCCGCGCGCTCCACTTCGCGGCGCACCTGCCCTGCC
CTAGGCGTGGCCGCGGGCGGGGGGTCGCCCTTGCTCGTGCTCGTTCCAGGCGTCGCGTGGTAGTAGATTTTC-GTTTTCC
ATGAAGCGGGCCGGTTTCGGCTGTTGCGCGGATCCGTCTGTTGGTA-------------CAGGCTATGCTCGCTGGGTGC
TAGAGGATGGGGGATTCTGGGGGTTTCATAGCGCTGATTGTGTGGGTGACTGGAACGGTTGAGTGGTC---GCACGGTCC
ACACTGCCTGTTCTTACATGTTAGTGCCTGC-------TAACCTTGGTTTCAGAGGGCTTCATGTCTGCGTTTCCGTTGT
GCG----ACTGGTGGTAGCAGCTCTG------AGTGATTCCGTTCTTCAGCTTTAGCTGCCACCTTCTGTCTCTGTTGCG
CAACCGGCGTAGCCTTGAGGATTCCCTTCATCGACTTAAGCTAGCAGGCTATTTTCCTTGCAAGCACTTGCCTTGTGATT
CAGTTGCTGGCATTTCTTATTTCAAACCTGT-------GAGCGGCTGCGGTTGTGATGTAT-AGCAGTTTCTAGATACCC
ATGCAAGCCTATGAGTTTTGGCCCAGCCGATG------------------------------------------------
-----------------TTCTAGGTTCTCCAATT-ATAACTTTACTAAACTAAT--AAATCTCGTTCTGTAGTTTTAGCT
TGCAGGTAGTATTGGCCCTGGC--CCATACCAACATAACGTGTAACGATTATTTAGTGGCATCTTTACGAGATGCAGTTA
ATGTTATCAATTCCT-----TTTTCTACTAGGTTTCACGGTTCAACAGATG-CACATAAGTGTTGAACCACCTGCAGGAT
GGGTTCTACTAT-------------------------GATATATATGTAAACATGGGTGTGAGCGTCATCCTTCAGAATG
CCATAATATTATGCTCTGTTTGCAAGTGTCTGTCGGGTTAGTTTGGGCCTTTTGGTGTGGGGGGGAATGGATAGTCAGTT
ACGCACAAAGTTTGCTGTATGTATTTGTAGACAAAGTAGAGCCGTTATCATCGGTATCTTATGTTC-GGTGTCAGATTCG
TACTATACTATCTTTCTTGAAAACTGAAAGGCATAAC-----CTGCGTTTACCTTTTGCTACTTA-------TTTGTTAC
CAGGGTGGCTCATATTTGAGTGTCGCCCCTGACCATTACCCATCTGTTACCAGGGTGATTCATTAGTTGACGCGGGCAAC
TTATCCATTACCCGATGGTGTGCCCCAACTTCCAAGTCTTAACCCAAATTCTGTATTTGTATACTCAGCAAGAGAAGGAG
AAGATGATGGTGAGCGAGATGATCGGCAAGGTGACGAGCGAGTGCTGGGACAAGTGCATCACAGGCGCTCCCGGGAGCAA
GTTGAGCTCCGGCGAGACGAGCTGCCTGAGCAACTGCGCGCAGAGGTTCATCGACATGAGCGAGATGATCGCCAAACGTT
TTGGCGCGCACTAG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>chr5A_1_TraesCS5A01G291700
TCCGTTGCTATTGTTATCATCACTATAAAATACCAAAAATATTACTTTTGCTGCCATTACCTTTTACCACCGTTACCACT
ACTATCATATTACTTTGCTACTAAATACTTTGCTGCAGGTATTAAGTTATCCAGGTGTGGTTGAATTGACAACTCAGCTG
CTAATACTTGAGAATATTCTTTGGCTCCCCTTGTGTCGAATCAATAAATTTGGATTGAATACTCTACCCTCGAAAACTGT
TGCGATCCCCTATACTTGTGGGTTATCAGGCGCGCGTCCCGAGGAGGAGCTGGCCTCACGGTCGTGCTTCCCCTTGCGGT
CGTGCTTCCAAAGGCCCATGGTTGCGGCCGACCGGCGAGGTCGACGACGGGGAGCGGCTAGGGTTTTGAGGGTGTCGGGT
TTCGAGGGGGTAGAGAGGGGCCGAAGTGGGAACTGTGGACGACGACCGGTCCACGGCTTCCCATTTAAGAAGGACGGTGA
CCCTTCGTTGTGCGGATGACAGGTGGGGCCACCCTCCCTTGCGCATTTATGTTGGCGGGTGGGAGGTAGGTGGCCGCCTG
CCACGCGGCCCCGACGCAGACGTTCGAAGCGTCCGTTCGCTATCCGCCGCGACCCAAACCCGACGCAAGTTTGCGCTCGA
AATGGATCGGCCCGGACACAAAACGGACCAGATGGGTCCGGGCCGTCGCGCGCTGGGCTGCCCCGTTTGTCCCTTTTTTT
AGGGGTGCTTCACCTTTTTTTTAGACAAAATCCTTTTGTTTTTGTGAACGGAGGAGCATGGCCTTGTTGGGCCTGGTAGA
ACTGGGCCCGTTTCGAACCCAAACCCAAGCCCAGGTCTCGTGGAGCGGGTCAACGGC---------CGCCACATAAACCC
CTGCTTCTCCCCTGTCTCTCTCCCGACACTCTC---CGCTCTCCTCTTCCCCTTGCCCCCCT---CGTCTTCCGCCGGAA
CTAGGGTTTTAGCGGTCCTCGCCCGTCCGGCCGTCGCCCTCGGGAG------CCATCAGCCATGGACGCCTCGGCCGAGC
TGCAGCGGTTCATCGAGGTGAGAGCTCCCTCGGCGCAGCTTCCCCTCAATCGATTTCAAAATTTCTCGAGCCCCGCCCGA
AGCACGCGCCGTCCCGGCCGCCGCTGGCCTTCGGATTTCCGAGCCCCGCGCGCTCCACTTCGCGGCGCACCTGCCCTGCC
CTAGGCGTGGCCGCGGGCGGGGGGTCGCCCTTGCTCGTGCTCGTTCCAGGCGTCGCGTGGTAGTAGATTTTC-GTTTTCC
ATGAAGCGGGCCGGTTTCGGCTGTTGCGCGGATCCGTCTGTTGGTA-------------CAGGCTATGCTCGCTGGGTGC
TAGAGGATGGGGGATTCTGGGGGTTTCATAGCGCTGATTGTGTGGGTGACTGGAACGGTTGAGTGGTC---GCACGGTCC
ACACTGCCTGTTCTTACATGTTAGTGCCTGC-------TAACCTTGGTTTCAGAGGGCTTCATGTCTGCGTTTCCGTTGT
GCG----ACTGGTGGTAGCAGCTCTG------AGTGATTCCGTTCTTCAGCTTTAGCTGCCACCTTCTGTCTCTGTTGCG
CAACCGGCGTAGCCTTGAGGATTCCCTTCATCGACTTAAGCTAGCAGGCTATTTTCCTTGCAAGCACTTGCCTTGTGATT
CAGTTGCTGGCATTTCTTATTTCAAACCTGT-------GAGCGGCTGCGGTTGTGATGTAT-AGCAGTTTCTAGATACCC
ATGCAAGCCTATGAGTTTTGGCCCAGCCGATG------------------------------------------------
-----------------TTCTAGGTTCTCCAATT-ATAACTTTACTAAACTAAT--AAATCTCGTTCTGTAGTTTTAGCT
TGCAGGTAGTATTGGCCCTGGC--CCATACCAACATAACGTGTAACGATTATTTAGTGGCATCTTTACGAGATGCAGTTA
ATGTTATCAATTCCT-----TTTTCTACTAGGTTTCACGGTTCAACAGATG-CACATAAGTGTTGAACCACCTGCAGGAT
GGGTTCTACTAT-------------------------GATATATATGTAAACATGGGTGTGAGCGTCATCCTTCAGAATG
CCATAATATTATGCTCTGTTTGCAAGTGTCTGTCGGGTTAGTTTGGGCCTTTTGGTGTGGGGGGGAATGGATAGTCAGTT
ACGCACAAAGTTTGCTGTATGTATTTGTAGACAAAGTAGAGCCGTTATCATCGGTATCTTATGTTC-GGTGTCAGATTCG
TACTATACTATCTTTCTTGAAAACTGAAAGGCATAAC-----CTGCGTTTACCTTTTGCTACTTA-------TTTGTTAC
CAGGGTGGCTCATATTTGAGTGTCGCCCCTGACCATTACCCATCTGTTACCAGGGTGATTCATTAGTTGACGCGGGCAAC
TTATCCATTACCCGATGGTGTGCCCCAACTTCCAAGTCTTAACCCAAATTCTGTATTTGTATACTCAGCAAGAGAAGGAG
AAGATGATGGTGAGCGAGATGATCGGCAAGGTGACGAGCGAGTGCTGGGACAAGTGCATCACAGGCGCTCCCGGGAGCAA
GTTGAGCTCCGGCGAGACGAGCTGCCTGAGCAACTGCGCGCAGAGGTTCATCGACATGAGCGAGATGATCGCCAAACGTT
TTGGCGCGCACTAGAACAGGGCCAC--CACATGCAAGCGTGCAGTTGCTTCCTGGCCTTTTGAGTCATGTGTCTTTCGAC
GTGAGCGGATTTTGGTGTGGCGGTGAGAGATGCATA------------TCAGTGGGGTTTTAACTGAAT---GAACACCG
AAGTATGCCTGTCGTTGTCGCCATCCTT----GTAATTCTCGCACTCTGGGTTGAACTTTTGACCGTGCTTCCAGGGGCA
AGCAAGAAGTTTGGCCTGTTTGAACGCCAAGGATGGTGTGGTGTTTCCATTTCGTTTTGGTCCTCTGGCTATTTCGGTCC
GTCTGCCCAACCTATTTATTTATTCAG--AGAAGATTTGCTGGAGACCTGACCTGTTCATCTGATTTCTGGGCCAACATT
TGTTGTTGGTCCGCAACAACCGCGCAATCATTCGTCGCGAATTCTGGGATCCATTGCATCTCCCGATTGATTGACCTCTC
ATGGCGGGTACGGATGGCTGGCTTGTGTTGTGAAGTTGGAGTAGTACGAAAGTCTCTTGGAGAGACGTAGGATA-TTTCA
GAGGGTACTTACTATATGCGCACAAGCAATCACAAGTCTTCTTTAGCTTGGCTGTGAGTTAAGGGGTACATGTACGATCT
CGATTCACATACCAACAACCAACCAGCCAGCCAGATTTGGCACCTTTTTATAAAGATAAAGATAAAGAAAAAGAGAAAGG
TGGTGTGGACCGACGATCTCGATCACGAGCAGCAGCGGGCAGGAAGCAAGGACGACGCTGGACCAGCAGCGGTGCGGTGC
AGGACAGCAAACAGGA-----GTGTCGCCCACCACCAAAATGTAGGTGCTGGGAAT-----------GAATGAAATGGCA
CTCGTGGAAAAGTAAATCCCGCAGGCAGGGACAAGGAACG-----ACGAGCTCATCTCCTCTACATTTTTCTTTCTTGTT
ATTAAAAAAAGACCTATATTACTCCAATGATGAGTGCTCAACATGTTTAGCGCGTAATTAATACCATATCAAATATCAAC
GTTGGTGCTAATCACATAC
>chr5B_775
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------AGCATGGCCGTGTTGGGCCTGGTAGA
ACTGGACCAGTTTCGAACCCAAACCCAAACCCAAGTCTCATGGAGCGGGTCAACGGC---------CGCCACATAAACCC
CTGCTTCTCCCCTGTCTCTCTCCCGACACTCTC---CGCTCTCCTCTTCCTCTTGTCCCCCT---CCTCCTCCGCCGGAA
CTAGGGTTTTAGCGGTCCTCGC-------GCCGTCGCCCTCGGGAG------CCATCAGCCATGGACGACTCGGCCCAGC
TGCAGCGGTTCATCGAGGTGAGAACTCCCTCTGCGCAGCATCCTCTCGATCGATTTCGAGATTTCTCGAGCCCCGCCCGA
AGCACGCGCCGTC--GGCCGCCGCTGGCCTTCGGATTTCCGAGCCCCGCGCGCTCCACTTCGCGGCGCAC----------
CTAGGCGTGGCCGCGGGCGGGGGGTCGCC-GTGCTCGTGCTCGTTCCAGGCGTCGCGTGGTGGTAGATTTTTTGTTTTCT
ATGAAGCGGGCCGGTTTCGGCTGTTTGCCGGATCCGTCTGTTGGTAGGTACTACAGGCTCAGGCTATGCTCGCTGGGTGG
TAGAGGTGGGGGACTTGGG-----------GCGCTGATTTTGTGGGTGACTGGAGCGGGTGAGCAGCGGTGGTACGGTCC
ACACTGCCTGTTCTTACATGTTAGT----AGTGCCTGTTAACTTTGGTTTCAGAGCGCCTCATGTCTGCTTTTGCGTCGT
GCG----ACTGGTGGTAGCAGCTCTG------AGTGATTCCATTCATCAGCATTAGCTGCCACCTTCTGTCTCTATTGCG
CAATGGGCGTAACCTTGAGGATTCCCTACATCAACTTAAGCTATCAGGCCATTTTCCTTGCAAGCATTTGCCTTGTGATC
CAGTCACTGGCATTTCTTGTTTCAAACCTGTTGCCTGTGAGCGGTTGTGGTTGTGATGTGT-AGCAGTTTCTAGATAGAT
GCAG--GCCTATGAGTTTTGGCCCAGCCGATG------------------------------------------------
-----------------TTGTAGGTTCTCCAATTAATAACTTTACTAAACTAAT--GAATCTCCTTCTTTAGTTTTAGCT
TGCAGGTAGTATTGGCCCTGAGGTCCATACCAACGTAACTTGTAAGGATTATTTAGTGGCATCTTTACGAGATGCCG---
---------------------------------TTCACGGTTCAGCAGGTG-CACATACGTGTTGAACCACCTGCAGGAT
GGGTTCTACTAT-------------------------GATAT----GTATACATGGGTGTGAGCGTCATCCTTCAGAACG
CCATAATGTTGTGCTCTGTTTGCAAGTGTATGTCGTGTTAATTTGTGCCTTTAG----GGGCGGATATGGATAGTCAGTG
----ACACAGTTTGCTGTTTGTATTTGTAGACAAAGTAGAGATGTTATCATCGGTATGTTATGTTCTGGTGTCAGATTC-
----ATCCTATCTTTCTTGAAAATTGTAAGGCATAACTTAACTTGCGTTTACCTTGTGCTACTTA-------TTTGGTTC
CAGGGTGGATCATATTTGAGTGTTGCCCCTGACCATTACCCATCTGTTACCAGGGTGATCCATTAGTTGACACGGACAGC
TTGTCCATTGCCTGATACTGTGCTCCAACTTGCAAGTCTTAACCCAAATTCTGTATTTATATACGCAGCAAGAGAAGGAG
AAGATGATGGTGAGCGAGATGATCGGCAAGGTGACGAGCGAGTGCTGGGACAAGTGCATCACAGGCGCTCCCGGGAGCAA
GCTGAGCTCCGGCGAGACCAGCTGCCTGAGCAACTGCGCGAAGAGGTTCATCGACATGAGCGAGATCATCGCGAAACGTT
TCGGTGTGCACTAGAACAAGGCCGC--CACATGCACGTGTGCAGTTGCTTCCTGGCCTTTTGAGCTATGTGTCCTTCGGT
GTGAGCGGATTTTGGTGTGGCGTTGAAAGATGCATA-----GGTATGTTCAGTGGGGGTTTAACTGAG-------CACCG
AAGTATGCCTGTCATTGTCGTCATCCTT-GTAGTAATTCTCGCACTCTGGGTTGAACTTTTGACCGCGCTTCCAGGAGCA
AGCAAGAAGCTTGGCCTGTTTTAACACGCCAAGATTGTG-----TTCCTTTTCGTTTGGTCCTCCTGGCTATTTCGGTCC
GTCTGCCCAACCTGTTTATTTATCCAG--AGAAGATTTGCTGGA-----GACCTGTTCATCTGATTTCTGGGCCAACATT
TGTTGTTGGTCCGCAACAACCGCGCAATCATTCATAACGAATTCTGGGATCCATTGCATCTCTCGATTAATTAATCTCTC
ATGGTGAGTACCCATGACTGGC-----TCGTGAAGTTGGAGTAGTACGAAAGTCTCTTGGAGAGACGTAGGATA-TTTCA
GAGGGTAG------TACGCGAACAAGCAATCACCAAGTCTT-----CTTAGCTGTGAGTTAAGGG-TACATGTACGAGGG
AGTACATATCAA-----------CAACCAACCAGATTTGGCACCTTTTTTTAT----------------AAAGATAAAGG
TGGCGTCGACCGACGATCTCGATCTCGATCATGAGCAGCGG------AAGGACGACGCTGGACCAGCAGCGGTGCGGTGC
AGGACAGCAAGCGGGCGTGTCGTGTCGCCCACGACGGAATGTATGTATGCACAGGTCAGTGTGCTGGGAATGAAATGGCA
CTCGTGGAAAAGTAAATCCTGCTGGGAGAACC----AACCAACGAACGAGCTCATCGCCTCGACA---------------
--------------------------------------------------------------------------------
-------------------
>chr5D_783
CTTAGTTC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------GGCCTGGTAGA
ACTGGGCCAGCTTCGAATCCAAACCCAAACA-AAGTCTTGTGGAGCGGGTCAACGGCCGCCAGGCTCGCCACATAAACCC
CTGCTTCTCCCCTGTCTCTCTCCGACAATCTTCTAGCGCTCTCCTCTTCGTCTTGCCCCCTTCCCCCTCCTCCGCCGGAA
CTAGGGTTTTGGCGGTCCTCGCCCGTTC--------CCCTCGGGATCCATCACCATCAGCCATGGACGACACGGCCGAGC
TGCAGCGGTTCATCGAGGTGAGACCTCCCTCTGCGCAGCATCCCCTCAATCGATTTCAAAATTTCTCGAGGCCCGCCCGA
AGCACGCGCCATCTCGGCCGCCGCTGGCCTTCGGATGTCCGAGCCCCGCGCGCTCCCCTTCGCGGCGCACCTGCCCTGCC
CTAGGCGCGGCCGCGGGCGGGGGGTCGCCCGTGCCCGTGCTCGTTCCAGGCGTCGCGTGGTAGTAGATTTTTTGTTTTCT
ATGAAGCGGGCCGGCTTCGGCTGTTGCGCGGATCCGTCTGTTGGTAGGC---ACAGGCTGAGGCTGTGCTCCCTGGGTTG
TAGAGGTGGGGGATTTGGG-----------GCGCTGATTGTGTGGGTGACTGGAGCGGGTGAGCAGCGGTGGCACGGTCC
ACACTGCCTGTTCTTACATGTTAGTGCCTAGTGCCTGTTAACTTTGGTTTCAGAGGCCTTCATGTTTGCATTTCTGTCGT
GCAACCAACCGGTGGTAGCGGCTGTGCCTGTCAGTGATTCCGTTCATCA-------------------------------
-----------------------------------------TAACAGGCTCTTCTCGTG------------CTTGTGATT
AGCTACTC---------TGTTCCAAACCTGCCA-------------GTGGTTGTGATGTGCAAGCAGTTTCCTCTGAATC
TCTGATTGTGGCCCTGCTGGTCCATCTGCTGGTCGCGAATGCCTGCAGAGGGGCTGCGGGCGGACCTTGTGGTGCAGTGG
CTGTGGACAGCAGCTGTTTCTAGCTTCTCCACTT-AACTTGTACTACTACTAAACGAAATCTCATTCTGCAGTTTAGCTT
GG----------------------------------AATTTGTAAGGATTCTTTAGTGGCATCTCTACGACTACGACATG
TGATTAAAGCTACTTTATTATTTTCTCTAAGCTTTCATGGTTGAACAAACAACACATAAGGGTTGATCCAGCTGGTATCT
GTTGGCCCCAGTTTGTTTGTTTTATGGATGAACAGGCGATAT----GTGTACAAATATCATAATGTTGT-----------
-CATAATTTTGTCATCTGTCTGCAAGTAGTTGTCATGTTGGTTTGGGTCGTT-G----GGGCTGAAATGGATAGCCAGTG
----ACACAATTTGCTA----TATTTGTGTACAAATTAGGGC-GTTATCATCAG-----TATGCTCTGCTGTCAGACTC-
----ATG---TCTTGCTTGAAAACTGTAAAGCATACA-----TTCCGTTTACCTCGTGGTACCGTACTTATTTTTGTTAC
CGGGGTGGTTCATTTTAAGTGCTGG-CCCTGACCATTACCCATCTGTTACCAGGGTGATCCATTAGTTGACGCGGACAGC
TTGTCCATTACCCGTTGGTGTGCCCCGACTTGCAAGTCTTAACCCAAATTCTGTATTTATATACGCAGCAAGAGAAGGAG
AAGATGATGGTGAGCGAGATGATCGGCAAGGTGACGAGCGAGTGCTGGGACAAGTGCATCACAGGCGCCCCCGGGAGCAA
GCTGAGCTCTGGCGAGACCAGCTGCCTGAGCAACTGCGCGCAGAGGTTCGTCGACATGAGCGAGATGATCGCGAAGCGTT
TCGGCGCGCACTAGAACAGGACCACCACACATGCACGCGTGCAGTTGCTTCCTGGCCTTCTGAGCTACGTGTCTTTCGGT
GCGAGCGGATTTTGGTGTGGCGTTGAAAGATGCATAGGTAAGGTAGGTTCGGTGGGGGTTTAACTGAACGCCGAAGACCG
AAGTATGCCTGTCGTTGTCGTCGTGCTTGGTAGTAATTCTCGCACTCTGGGTTGAACTTTTGACCCTGCTTCCAGGAGCA
AGCAAGAAGTTTGGCCTGTTTTAACACGCCAAGATTTTG-----TTCCTTTTCGTTTGGTCCTCCTGGCTAGTTCGGTCC
GTCTGCCCAACCTATTTATTTATTTATTCAGAAGATTTGCTGGA-----GACCTGTTCATGTGATTTCTGGGCCAACATT
TGTCGTTGGTCCGCAGCAACCGCGCAATCATTCATCGCGAGTTCTGCGATCCACTGCATCTCTCGATTGATTGATCTCTC
ATGGTGCGTACGGATGACCGGC-----TTGTGAAGTTGGAGTAGCACGAAAGTCTCTTGGAGAGACATAGGATTGTTTCA
GAGGGTAG------TACGAGCACAAGCAATCAGCAAGTC-T-----CTTAGCTGTGAGTTAAGGGGTACATGTACGATCG
AGGTACACATATCAAGAACCAACCAACCAACCAGATTTGGCACCTTTTTCTAAAGAT-----------------TAAAGG
TGGCGTCGACCGACGATCTCGATC------ATGAGCAGCGG------AAGGACGACGCTGGACCAGCAGCGGTGCGGTGC
AGGACAGCAAGCGGGCGTGTCGTGTCGCCCACGACGGAATGTACGT------AGGTCTGTGTGCTGGGAATGAAATGGCA
CTCATAAAAAAGTAAATCCTGCTGGGAGAAAGAACGAACGAACGAACGAGCTCATCGCCTCGACA---------------
--------------------------------------------------------------------------------
-------------------
>SNPs
SSSSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S----------------
--------S-------------------S----S----------------------------------------------
--------------------------------------------------S---------------S--S----------
--------------------------S-S---------------------------------------S-----------
-----------------------S-------S-------S----------------------------------------
-------------S------------------------------------------------------------------
------------------------------S----------------------------------------S-------S
-------------------------------------------------------------------------------S
------SS----SS--SS-SSSSSSSSSSS------------------------S---S----SS-SS------------
-----------------------------SS-----------S--------------------------S-------S--
---------------------------------------------S-----S----------------------S-----
---SS------S---------------S----S----------S----------------------S-------------
----SS------------S-------------------------S--S-----------S-----------------SS-
SSSS-S--------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------SS------------S----S-----S-------------------------------S-S
SSS---SSSS-S-S------------SSS--S------------------------------------------------
------------------------------------------SSSS---S----------------------------S-
-------S--S------------------S-----S----------------S-SSSS---S--S--------------S
SSSS---S----------S-----------------------S--------------S---------------------S
SSSS--S-------------------S---------------S------------S------------------------
--------S--------------S-----------------------------------S---------------S--S-
--S----------------------------S--------------------------S-----S---------------
--------------------------------------------------------------------------------
-S----------------S-----------------------------------------------------S-------
-S---------------------------------S----------------------------SS------------SS
----------------------S---S------------------------------S----------S-----------
--------------------S-------------------------------------------------------S---
---------------------S---S-SSSSSSSSS-SSSSSSS----S--------S-SS-SS----------------
--------------------------------------------SSSSS-------------------------------
---------------------------------S----------------------------S-----------S-----
----S-S---------S-----SSSSS-----------------------------------------------------
-------SSSSSSS--S----------------S-SSSS-SSSSSS---S-----------------------------S
S-S-S------S---S---------S---S-------------------S-------SSSSSSSSSSSS-----S-----
---S--S-----------------S---S--SS---S-SSSSSSSSS---------------------------------
----------S-S--S----------------S--SS--SSSSS-SSSSSSSSSS-------------------------
-------------------S--S--S--SS----S---------------------S----S---SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS
>forward_419
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
TTCGAGGGGGTAGAGAGGG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_2130
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------AACATGGGTGTGAGCGTCAT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_467
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------GGTCCACGGCTTCCCATTTA-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_2460
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TCATTAGTTGACGCGGGCAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>forward_1941
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-GCAGGTAGTATTGGCCCTGG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------
>reverse_3630
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------GACAAGGAACGACGAGCTCA-------------------------------
--------------------------------------------------------------------------------
-------------------
