>input_sequence_48360
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------ATGGCCGGAGCGATCGCGTACGA
GGAGCAGCGCCGGAGGCAGATAGAGGAGAACAATCGCAAGCTGGAGGAGCTGCGTCTGCACCAGCTCTCCGCAGCAGTCA
GGGAGGCTGCCGGCCCTAAGTTCTCGCCGGTCAGATCGGAAGCCAAGTCTGTGAAGCCGAAGCAGGTGCCGCGGGACGCC
CCGGTCCGGCAGTCCGGCCGTGTGGCCAGCCTCCCCAAGCAGCCCAAGTACCGCTACGAGGTACTCCTA-----------
--------------------------------------------------------------------------------
------------CGTGGTTCCCACTTTTCTCTTCTTGCCTTCCTTCATTCATTCATTCAGTTACTAACCGACCGTACAAT
GCATCTTTATAAAAAAATGAAAAGAAGGATTACCACCGGCCTCTGCATCAGAACGATGCATGCGTCCATCTTATTAAAAA
GTGCCAATCAAAACGAAGTCTGCAATTCAGTACAGCTCGCAAATGTAATTAACTTGGTGTAATGT----ATG-------T
AGGATGACTACCCAACCTTGGTAGAGAAGAAGAAGATTA---GGAGGTACGTA-CCCCATCATTGCTCTCCATGAACCGA
AACATTTGATTTGAT----------GCATACGTACTTACCAC--TCTAGCTAGTTTATCTTTATCGATTGATTGTTTTTA
A---GGAGGGCGAGCAGCATGAGGAGTGACATAATTAATCGAGTAGACGCCACAGATGAGGCCAGACGCCATGCCAACTC
CAAAGCCCAAGAGCTGCTGCGTAAGCTGGTGCCCGGCGGCAACCCCAGCTTTGTCAAGCCCATGAAACAGTCTCATGTCA
CCGGAGGCTTCTGGCTCGTAAG-----CCCG-CTCACTCTTGC---ATTCACTTCACTAGCTTCCCTCTCTTATTGAAAC
CAAACTGTCTCGGTCGC---TCGCTCTG---------------------------TCTTATGACTGTGGGC---------
---CATTCATTTGCATCACTAACAGGGCCTCCCGTCGCAGTTCTGCGGCCTGTATCTCCCGGGGAGTGATGATACCATCA
CTTTGGAGGATGAGGAGGGTGTCGAGTACAAAACGCGCTACCTCGCGCTTAAGACGGGCCTCAGCGCCGGATGGAGAAGG
TTCGCCTTGGACCACAACCTGGTTGATGGTGATTGCTTGGTCTTCGAGTGGGTCGTGTGGAATACGTTCTATGTATGTGA
GATTTCTTATTTGTTAT---GCGTTCCCTTGTTAATTTGTTGGAAATTTATCTGTCCATGCATGGAACCCTATATATGTC
CTGCTGTGAGAATGGGTGTGCACTTCACAAAATTAATTAGGACAGTGGCTGGTGCACCCCACATATGCGCACCCAACACT
TTCATCATCTATTATTTTGATTCCTGAACTTC-----------GCATAAGCCATTTAGATTCTTATTTTTGTTTATAATC
TATTTATATTAAATTAGTATTATGATTAATTTCCCTCCATCAAAATTAATCTAATCCCTACATGATCAGAAATATACTTA
GGCGTAAAGCCCAAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CAAAGTATTATAAATATTTGATTGATGCTCAATCATACTACACCGGCGCTTTGAT
ATAGCCGCTGCTATGTAAATGATGCAGGTCTACATTATCAGACAAAGTTCCTACTACAAATGA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>chr3D_1_TraesCS3D01G539200
TTTATTCTAATTTTTTCCATTTTTTATCTAGTTTCTCTAGTTTATTTGTTCTTTGAAAAAAA--TGTAAACTACTTTTGA
CAAATACATGAACATTCTATAATGCGTAGAAGCTTTACTAAAACCATAGTAATATTGTTCTAATAATAAGTATGTGAACA
CTTTTAATAAACTACATGGATATCTTATTAAATGCATGAATATGTTTTCAAATACATGAAGACTTTTTAAATATACGCAA
ATATTTTTTAAATACATAAAATAATTAATTGCATGGACACATTTAAAAATTAATGACATTTTTAAATGCCGATTAATAGG
AAACCAGTATGTTGCTAATTTCTAACTAAAAAAAGAGTAGTATGTTGCTGATTTTTGCCAAAACAAGTTTTACTATTTTT
CTTCCTCGCAAATTTTTTTTTACTATTTTTCTGTGAATAATCGTTTCATAGAAAAAAATATGTTTGTGTTTTTTTCGATT
TTATTTTGAGGGGTTGTGTTTTTGTAGACGGAAAATTATGATTGTATTGTGTGGAGTTTCTTATTTGGATACGATCCATC
CTGTTCCTATTTCTGTGTGAGTTGCCCCTTTCTACGTACGTGAGTTTCCTATTTTCTGTGTTAGGTTACGAACCTGTTTT
TTATGGAAACCGTGGGTTTGGAAAAACGGCCGATACTTTCGCAAAAAAAAAGGGGAAGAACGGCCGATACGCCTTGTATG
---TTCTTCTAAATTATAAAATGGCAAGAGTACGTTAGAGTTTGTATATGCGGGATTTGTTTCTGGAATTATGCCACGAA
TATCAGGGCTTGACGAACTTTCTTCGCCGTAAATAAAGCGTGCTGATCACATCAACAGAATCCCTGAGAAAGCGCAAGTG
ATTTCGAACGTTTGAAGTTTTGAATCTCG----TCCAATTTATAG----GCCGCCGCATCTCATCTCCTCCCG----TTC
ATTCTGTTGCGTTGCGTTCGTCTCCCCCAACAACATCGAGCGAGAGCGAGAGAAGAAATGGCCGGAGCGATCGCGTACGA
GGAGCAGCGCCGGAGGCAGATAGAGGAGAACAATCGCAAGCTGGAGGAGCTGCGTCTGCACCAGCTCTCCGCAGCAGTCA
GGGAGGCTGCCGGCCCTAAGTTCTCGCCGGTCAGATCGGAAGCCAAGTCTGTGAAGCCGAAGCAGGTGCCGCGGGACGCC
CCGGTCCGGCAGTCCGGCCGTGTGGCCAGCCTCCCCAAGCAGCCCAAGTACCGCTACGAGGTACTCCTA-----------
--------------------------------------------------------------------------------
------------CGTGGTTCCCACTTTTCTCTTCTTGCCTTCCTTCATTCATTCATTCAGTTACTAACCGACCGTACAAT
GCATCTTTATAAAAAAATGAAAAGAAGGATTACCACCGGCCTCTGCATCAGAACGATGCATGCGTCCATCTTATTAAAAA
GTGCCAATCAAAACGAAGTCTGCAATTCAGTACAGCTCGCAAATGTAATTAACTTGGTGTAATGT----ATG-------T
AGGATGACTACCCAACCTTGGTAGAGAAGAAGAAGATTA---GGAGGTACGTA-CCCCATCATTGCTCTCCATGAACCGA
AACATTTGATTTGAT----------GCATACGTACTTACCAC--TCTAGCTAGTTTATCTTTATCGATTGATTGTTTTTA
A---GGAGGGCGAGCAGCATGAGGAGTGACATAATTAATCGAGTAGACGCCACAGATGAGGCCAGACGCCATGCCAACTC
CAAAGCCCAAGAGCTGCTGCGTAAGCTGGTGCCCGGCGGCAACCCCAGCTTTGTCAAGCCCATGAAACAGTCTCATGTCA
CCGGAGGCTTCTGGCTCGTAAG-----CCCG-CTCACTCTTGC---ATTCACTTCACTAGCTTCCCTCTCTTATTGAAAC
CAAACTGTCTCGGTCGC---TCGCTCTG---------------------------TCTTATGACTGTGGGC---------
---CATTCATTTGCATCACTAACAGGGCCTCCCGTCGCAGTTCTGCGGCCTGTATCTCCCGGGGAGTGATGATACCATCA
CTTTGGAGGATGAGGAGGGTGTCGAGTACAAAACGCGCTACCTCGCGCTTAAGACGGGCCTCAGCGCCGGATGGAGAAGG
TTCGCCTTGGACCACAACCTGGTTGATGGTGATTGCTTGGTCTTCGAGTGGGTCGTGTGGAATACGTTCTATGTATGTGA
GATTTCTTATTTGTTAT---GCGTTCCCTTGTTAATTTGTTGGAAATTTATCTGTCCATGCATGGAACCCTATATATGTC
CTGCTGTGAGAATGGGTGTGCACTTCACAAAATTAATTAGGACAGTGGCTGGTGCACCCCACATATGCGCACCCAACACT
TTCATCATCTATTATTTTGATTCCTGAACTTC-----------GCATAAGCCATTTAGATTCTTATTTTTGTTTATAATC
TATTTATATTAAATTAGTATTATGATTAATTTCCCTCCATCAAAATTAATCTAATCCCTACATGATCAGAAATATACTTA
GGCGTAAAGCCCAAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------CAAAGTATTATAAATATTTGATTGATGCTCAATCATACTACACCGGCGCTTTGAT
ATAGCCGCTGCTATGTAAATGATGCAGGTCTACATTATCAGACAAAGTTCCTACTACAAATGAATGCCGAATCATGAGGG
TGTGATATACTGAGATTTGAAGATTCACATGGGAGCGGGTAATTTGTTCATATTATTGTCAGCATTTGCTGAATATTTGA
ATTGGGTATTTTGAAAGTTTATTTATAAGCCCTTTTGTTGTGTAGTAGCCACATGGCTGGTATAATCATGGAATTTCTGT
TTCCGTATGATTTTGCCCGCCGTAACTTTGTGTCCTGCACTGCGGTTAGTTGTAAACATGAAAAGATCAACTGTTAGCTA
AAATTTTCATTTCTGCAAAACTAGTTGATTACAGG-ATGCTAGAGCATTTATAAAATTAATTTGATATAGTGCTTTTGGG
TATGTATAGTATGTCTTAGATGCCTTATGAAAGACTCTACTTTTGTTGCCTTGCCCGGTATATGG-CCTCTGAAATGTGT
ACTCCACTCTTACAAGTTGATCTGTAGTTTTGTGCATCAGTATTTGTTTTCATAGGAAAGTTCTTGGATGATCACAGAAA
CAGTACTAGTCTACCACACACCTTGCTGTATTTGCAGATTCAAAGAATGATAAGACCACATTTCCTCAACCAAGTTTTTT
CTACATTTTGAGTCTTCATATCTGCCCATGAACGTGTCATATCTGAGGGGAATGCTTTAGGTTACTAGTTTGTAGCTTTC
TATACATGTTTAGTGTGTTGGTTTGCGATTTGTTGATGACCACCAGCACTTAGATGTCATCTACTTCCACACTTCACTAT
TTTCGCCTATCATACA--------TATCATTGTCTAACCCTAACCTTGTTCCTTTTTACCAAGTTTTAT--TTGTTTTGG
ACAATTAGGTCTACTTGAAGGAATTGGACGACGAGTTTGCAAGTTGAGAAGTTCATGGATTCTCATGGTAGT--TATGTT
TGGACTTTTATATGGGAACCAATGACATTTGTAAATAATTCATGTTTCCCCATCCTTGTTTCTATCCGACTTTGCGTGAT
TTCCCATTTAACCTACTATGCAAGAACACATAAGTTG
>chr3A_32
-------------------------------TTTCTTTAGTTTATTTGTTCTTTGAAAAAAAAATGTAAACTACATTTGA
CAAACACATGAACATTCTATAACGGC-AGAAGCTTTTCTAAAACCATACTAATATTTTT-TAATAATAAGTATGTGAACA
CTTTTAATAAACTACATGAATATTTTATTAAATGCATGGATATGTTTTGAAATACATGAGAACTTTTTAAAACTACGGAA
GCATTTTTTAAATACAATTAATTGTAGG----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AAAATTATGTTTGTGTGTTTTT-----
------------------------TAGATGGAAAATTATGTTTGTGTTGTGTGGATTTTCTTATTTGGATAAGATCCATC
CTGTTCCTGTTTCTGTGTGAGTGGCCCCTTTCTACGTACATGAGTTTCCTATTTCC-GTGTTAGGTTACGAATCAGTTTA
TTATGGAAACCGTGGATTT----------------------------------GGAAAAACGGCCGATACGCCTTCTATG
TTCTTCTTCTAAAATATAAAATGGAAAGAGTACGTTAGAGTTTGTATATGCGGGATTTGTTTATGGAATTATGCCACGAA
TGCCGGGCCCTACCAAACTTGCTTGGCCGTAAATGAAGCGTGCTGATCACATCAACAGAATCCCTGAGAAAGCGCAAGCG
ATTTCGAACGTTTGAGCTTTTGAATCTCGGTCGCCCAATTTATAGGCCGGCCGCCGCATCTCATCTCCTCCCG----TTC
ATTCTGTTGCGTTCGTCT------CCCCAACAAC----------------AGAAGAAATGGCCGGAGCGATCGCGTACGA
GGAGCAGCGCCGGAGGCAGATAGAGGAGAACAATCGCAAGCTAGAGGAGCTGCACCTGCACCAGCTCTCCGCAGCCGTCA
GGGAGGCCGCCGGCCCCAAGCCCTCGCCGGTCCGGC---------AGTCCGTGAAGCAGAAGCGGGTGCCGCGGGACGCC
GCGGTCCGGCAGTCCGGCCGTGTTGCCAGCCTCCCCAAGCAGCCCAAGTACTGCTACGAGGTACGTACGCGATCTTTAAT
ACC------CAAAAATGTATGTATCTAGG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------ATTAACTTGGTGTAATGT----ACTATGTATCT
AGGATGACTACCCAACCTTGGTAGAGAAGAAGAAGATTAGGAGGAGGAACGTACCCCCATCATTCCTCTCCATGCACCGC
AGCATTTGATTTGATTGA--------------------------------------------------TGATTGTTTTCA
AGGAGGAGGGCGAGCAGCACGAGGAGTGACTTGATTAATCGAGTGTACGCCACAGACGAGGCCAGACTCCATGCCAACTC
CAAGGCCCAAGAGCTGCTGCGTAAGCTGGTGCCCGGCGGCAACCCCAGCTTTGTGAAGCCCATGAAACAGTCTCATGTCA
CTGGAGGCTTCTGGCTCGTAATTAAGCCCCCACTCACTCTTGCATTACTCACTTCACTCCCTTCCCTTATTG--------
-AAAGTTGAAACCGTCTTCGTCGATCTG---------------------------TCTGATGATTGTGGGG---------
---CGTTGGTTTGGATTGCTGACAGGGCCTCCCGACGCAGTTCTGCCGGCTGTATCTCCTAGAGAGTGATCATAGAATCA
CTTTGGAGGACGAGGAGGGTGACGAGTATGAAACGCTCTACCTCGCGCTTAAGACGGGCCTCAGCGCCGGATGGAGAAAG
TTCGCCTTGGAGCACAACCTGGTTGATGGTGATTGCTTGGTGTTCGAGTGGGTCGTGTGGAACAAGTTCTATGT----GA
G-TTTCTTATTTCTTATTATGTGTCTAGCTATAT---------------------------ATGGAACCCTATATATGTC
CTCTAGTGAGAATGGTTGTGCACTTCACAGAATTAGGATATGCGCCGG-------------------------CAACACC
TTCATCATCTATTATTTTGATTCCTGAAATTCATATCAAATGAGCATAAGCCATTTATATTCTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCAAAGTACTATAATTATTTCATTGAAGCTCAATCATATTACACCGGCCCTTTGAT
ATACCCGTTGTTATGTAAATGATGCAGGTCTACATTATCAGACAAAGTTCCTACTACAAATGAATGCCAAATCATGAGGG
TGTGATATACTGAGATTCGAAGATTCAGATGGGAGCGGGTAATTTGTTCATATTATTGTCAGCATTTGTTGAAAATTTGA
ATTGAGTATTTTTAAAGTTTATTTATAAGCCCTTTTATTGTGTAGCTGCCACATGGCTGGTACAATCGTGAAGCTTCTGT
TTTCGTATGATTCTGCCCGCCATAATTTTGTGTCCTGCATTGCAGTTAGTTGTAAACATGAAAAGAATAACTGTTGGCTA
AAATTTTCATTTCTACAAAACTAGTTGATTACAGGGATGCTAGAGCGTTTATAAAATTAATTTGATATAGTGCTTTTGGG
TATGTATAGTATGTCTTCGATGGCTTATGAAAGACTCTACTTTTGTTGCCTTGCCCGGTATATGGGCCTCTGAAATGTGT
ACTCCACTTTTACAAGTTGGTCTGTAGTTTTGTGCATCAATATTAGTTTTCATAGGGAAGTTCTTGGATGATCACAGAAA
CAATACTAGTCTACCACACACCTTGCTGTGTTTGCAGATTCAAAGAATGATAAGACCACATTTCGTCAACCAAGTTCTTT
CTACATTTTGAGTCTTGATATCTGACCATGAAC-TGTCATATCTAAGGGGAATGCTTTAGGTTACTAGTTTGTAGCTTTC
TATACATGTTTAGTGTGTTGGTTTGCGATTTGTTGATGGCCACCAGCACTTACATAGCATCTACTTCCGCACTTCATCCC
C----CCTATCATACATAATCTATTATCATTGTCTAACCTTAACCTTCTTCCCTTTTTACTAACTTTTCAGTTGTTTTGG
TCAATTAGGTCTACTTGAAGGAATTGGACGACGAGTTTGCAAGTTGAGAAGTTCATGGATTCTCATAGTAGTTATATGTT
TGGACTTTTATATGGGAACCAATGACATTTGTAAATAATGCATGTTTCCCCATCCTTGTTTCTATCCGACTTTGTGTGAT
TTCCAATTTAACCTACTATGCAAGAACACACAAGCTG
>chr3B_734
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------AAATGGCAAGAGTACGTTAGATTTTGTATATGCGGGATTTGTTTCTGGAATTTTGCAACGAA
TATCGGTCCCTGACGAACTTTCTTGGCCGTAAATAAAGCGTGCTGATCACATCAACGGAATCCCTGAGAAAGCGCAAGTG
ATTTCGAACGTTTGAACTTTTGAATCTCG----CCCAATTTATAG----GCCGCCGCAGCTCATCTCCTCCAATTCATTC
ATTCTGTTGCGTTGCGTTCGTCTCCCC-AACAGCAACGAGAGAGAGCGAGAGAAGAAATGGCCGGAGCGCTCGCGTACGA
GGAGCAGCGCCGGAGGCAGATGGAGGAGAACGATCGCAAGCTGGAGGAGCTGGGTCTGCACCAGCTCTCCGCAGCCGTCA
GGGAGGCCGCCGGCCGCAAGCCCTCGCCGGTCAGATTGGAGGCCAAGTCTGTGAAGCCGAAGCAGGTGCCGCGGGACGCC
CCGGTCCGGCAGTCCAGCCGTGTGGCCAGCCTCCCCAAGCAGCCCAAGTACCGCTACGAGGTACTCCCTCCGTTCGGAAT
TACTTGTCGCACAAATGGGTGTATCTAGACGTATTTTTGTTCTAGATATATCCATTTCTGAGACAAGTAATTCCGAACGG
AGGGAGTACTCCCGTGGTTTCCACTTTTGTTTGCC------------TTCATTCATTCACTTACTAATCCA----ACAAT
GCATCTTCTACTAT------------------------------------------------------------------
---------------------------------------------TAATTAACTTGGTGTCATGCGTGGATG-------T
AGGATGACTACCCAACCTTGGTAGAGAAGAAGAAGATTA---GGAGGTA-----------CATTCCTCTCCATGCACCGA
AACATTTGATTTGATTTGATTTGATGCATACGTACTTACCACACTCTAGCTAGCTTATCTTTATCGATTGATTGTTTTTA
A---GGAGGGGGAGCAGCACGAGGAGTGACATAATTAATCGAGTGGACGCCACAGACGAGGCCAGACTCCATGCCAACTC
CGAGGCCCAGGAGCTGCTGCGTAAGCTGGTGCCCGGCGGCAACCCCAGCTTTGTCAAGCCCATGAAACAGTCTCATGTCA
CCGGAGGCTTCTGGCTCGTAATTAAGCCCCA-CTCCCTCTTGCATTATTCACTTCACTAGCTTCCCTTACTG--------
-AAACTTTCTCGGTCTC---TCTGACTCTTTTTTTTTGAAACAAGTCTCTCTGACTCTAATGATTGTATTACTGAAACTC
TGACATTGAATTGTATTACGACCAGGGCCTCCCGTCGCACTTCTGCGGCCTGTATCTCCCGGGGAGTGATGATACCATCA
CTCTGGAGGATGAGGAGGGCGTCGAGTACAAAACGCGCTACCTCGCGCTTAAGACGGGCCTCAGCGCCGGATGGAGAAGG
TTCGCCTTGGACCACAACCTGGTTGATGGTGACTGCTTGGTCTTCGAGTGGGTCGTGTGGAATACCTTCTATGT----GA
GATTTCTTATTTGTTATTATGCGTTCCGTTGTTAATTTGGAA--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------TATTATAAATATTTGATTGAAGCTCAATCATATTACCCCGGCCCTTTGAT
ATAGCCGTTGTTATGTAAATGATGTAGGTCTACATTATCAGACAAAGTTCCTACTACAAATGAATGCCGAATGATGAGGG
TGTGATATACTGAGATTCGAAGATTCACATGGGAGCAGGTAATTTGTTCATATTATTGTCAGCATTTGTTGAAAATTTGA
ATTGAGTATTTTGAAAGTTTATTTATAAGCCCTTTTGTTGTGTAGTAGCCACATGGCTGGTATAATCGTGAAACTTCTGT
TTCCGTATGATTTTGCCCACCGTAACTTTGTGTCCTGCATTGCCGTTAGTTGTAAACATGAAAAGAATAACTGTTGGCTA
AAATTTTCATTTCTGCAAAACTAGTTAATTACAGGGATGCTAGGGCGTTTATAAAATTAATTTGATATAGTTCTTTTGGG
TATGTATAGTATGTCTTAGATGCCTTATGAAATACTCTACTTTTGTTGGCTTGCCCGGTATATGGGCCTCTGGAATGTGT
ACTCCACTTTTACAAGTTGACCTGTAGTTTTGTGCATCAATATTTATTTTCATAGGAAAGTTATTGGAATGTCTACCA--
--------------CACACACCTTGTTGTGTTTGCAGATTCAAAGAATGATAAGACCACATTTCCTCAACCAAGTTTTTT
CTACATTTTGAGTCTTCATATCTGCCCATGAACGTGTCATATCTGAGGGGGATGCTTTAGGTTACTAGTTTGTAGCTTTC
TATACATGTTTAGTGTGTTGGTTTGCGATTTGTTGATGACCACCAGCACTTAGATGTCATCTACTTCCGCACTTCACTAT
TTTCTCCTACCATACATAATTTATTAGCATTGTCTAACCTTAACCTTGTTCCCTTTTACCAAGTTTTAT--TTGTTTTTG
TCAATTAGGTCTACTTGAAGGAATTGGACGACGAGTTTGCAAGTTGAGAAGTTCATGGATTCTCATGGTAGT--TATGTT
TGGACTTTTATATGGGAACCGATGACATTTGTAAATAATTCATGTTTCCCAATCCTTGTTTCCATCCGACTTTACGTGAT
TTCCCATTTAACCTACTATCCATGAACACATAAGTTG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-------------------------------------S-----
----S-----------------S-SSS---------S-----------S-------S--S--------------------
------------------S----S--------------S---------S----------SS----------SS----S--
SS--------------SSS---SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-----------S-----SSSSS
SSSSSSSSSSSSSSSSSSSSSSSS----S-----------S----S---------S---------------S--------
--------S-------------S----------------S--------------S-S---------------S-S----S
---------------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-----------------S----
-------------S------------------------------------------------------------------
----S--S-S--------------S-------------------------------------------------------
----------------S----------------S----------------------------------------------
-----------------------------------S----S---------------------------------------
---------------------------------------------------------------------------S----
-------S--------S---SS--------------S---S---------------------------------------
-------------------------------------------------------------------SS-----------
--------------------------------------------------------------------------------
-------------------S--------S-S-S-SSSSSSSSSSSSS------------S-------S-S-SSSS-----
-------SSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------
----------------------------------------------------------------S---------S-----
-----------------------------------------------------S--------------------------
-------------------S------------------------S-----------S----------S------------
---S----------------------------------------------------------------------------
---------------------S--------S------------------------------------SS--SSSSSSSSS
S-----S--------S-------S----------------------------------S----S------S---------
-------S-----S--S---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------SSSS--
---------------------------S-----------SSSSSSSSSSSSSSSSSSSSSS-------------------
--SSS----------S-------------S-----SSSSSSS-SSS--SSSSSSSSSSSSSSSSSSSSSSSSS------S
----------------------------S----------------------------S-----SSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSS-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------S---------S-------
-------S--S---------------------------------------------------------------------
-----------------S--------------------------------------------------S----S------
----S--------------------------------------------------------------S--S--S------
---------------------------------------S---S----------------------SS-------S----
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
--------S------------------------------S----------------------------------------
--S--------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
----S----------------------------------S------------S---------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>forward_669
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------CCGTGGGTTTGGAAAAACGG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>reverse_2436
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------ATTAGGACAGTGGCTGGTGC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>forward_1510
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------GAACGATGCATGCGTCCATC----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>reverse_2460
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CACATATGCGCACCCAACAC-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>forward_2455
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------ATTAGGACAGTGGCTGGTGC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
>reverse_3443
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--GTACTAGTCTACCACACACCTTGC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------
