>input_sequence_48341
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------------------------------------------------------------------------ATGCTCTC
CACGGCCCGCGCGGTGACCTCGCCCGCCGCGTGCGCTGCCCAGCACCAGCAGCATGGCGGGAGCCGGTTCGTCGTGTTCC
TGGCCGGCGATGACGGGAGGGGAGCTGCCGGTTCCAGCAGCGTGCGTGCGCCGAGGCCGCGCTCTGTGGCAGCGCGTGCC
GCCGGCTCGTCCAACCACGCTGTCTGCCTCGAGGCGGCCGCGCCGTGGAGCATGGACTGTGTCGCGGCGCCGGCGACCGT
GTCGTACGAGGAGAGCGTGCGCCAGGTCGTGCTCAAGCAGGCGGCGCTCGCGGCCTCGACCACGCCGAGGAAGGCGCGGC
ACGCCGGCCGTGACGCCGGCGTGCTGGACGCGGCCTTCGACCGCTGCGGCGCGGTGTGCAAGGAGTACGCCAAGACGTTC
TACCTGGCCACGCAGCTGATGACGCCGGAACGGAGGCGGGCGATCTGGGCGATATACGGTAAGCACT--CGTCGATCGCG
ACATGCTGCCACTAGCT----TCCACGTTGGTGGACGCAACGCAAGTACGCAACAGCAGGAGGTCATTGATGTGGTTA--
-ACTTCTTGGATGCGTCGCGCATGCAGTGTGGTGCCGGAGGACGGACGAGCTGGTGGACGGCCCGAACGCGGCGCACACG
TCGGCGCTGGCGCTGGACCGCTGGGAGTCGCGCCTCGACGGCGTCTTCGCCGGCCGGCCCTACGACATGCTCGACGCGGC
GCTGGCCGACGCCGTGGCCGCCTTCCCGGCGGTCGACGAGCGGCCGTTCCGGGACATGGTCCAGGGGATGCGCATGGACC
TCGCCAAGTCCCGCTACGCCACCTTCGACGAGCTCTACCTCTACTGCTACCGCGTGGCCGGCACCGTGGGGCTCATGACC
GTCCCCGTCATGGGTGTCTCCCCGGGCTCCCAGGCGGACGTGGAGACGGTGTACGCCGGCGCGCTCGCCCTCGGCGTCGC
CAACCAGCTCACCAACATCCTCAGGGACGTCGGCGAGGAGTAAGTGTCTGTATAG---------TATGTTGC-TTCTGAA
TTCACGCGCTCTTGCCGATGACTGCTCATCTCTGACACCGCCATTGTTGCACAGTGCGAGGAGGGGAAGGATCTACCTGC
CGCAGGACGAGCTAGCCATGGCCGGCATCTCCGAGGCGGACATCTTCGCCGGCCGTGTCACCGACGAGTGGAGGAGCTTC
ATGAAGGGACAGATCGCGAGGGCCAGGGCCTACTTCAAACAAGCCGAGCAAGGCGCCGCCGAGCTCAACCAGGAGAGCCG
ATGGCCGGTACGCGCGCGA--------------------------------------CAAAAGTTCCATCAAAAAATTCA
AAAATTCTCAGCCAAAAATGTCAAATTCAGTAGTCTAAGTAAGTTTCAGATTAACATGTAATACGATTTGCATGCAGGTG
TGGGCATCTCTGCTTCTGTACCGGCAGATCCTGGACGAGATCGAGGCCAACGGCTACGACAACTTCAGCAAGCGGGCCTA
TGTTCCCAAGGCCAAGAAGCTGGCGGCGCTGCCCAAAGCTTACCTCAGGTCCCTCATGCCTCCTCCTTCTTCGCAGAGGC
GCCGTTGA------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr5A_1_TraesCS5A01G356300
GAGGCAGGGCAGGGAAGTGAAGGCCGTCGCCGTCCATCACCTCGCTGCTCCGCCGTCCAAGTGCAGAGCAGGCGGCTCTT
CACCCGCCGGATGCCGTGCGCCCGGCGCAACACGGTCCTGCGCGTCGACGCATGCGTGCACGCGGCGCGGTGACCGCGCC
CGCCGCCACGACGGAACGAGCGCGTCCGTCTGGGCCAGCACGCACCCGGCCGGCGTCCGAGATCGCTACAGCAGAAAAAG
AAAGAAAGGCGACAAGAAGCCACGAGAGCGGACAGGATATGCTCAATCATGCATAGTGGACACACCCCGCCCCACCAGGT
GCTCCTTGTCTCCGCCCCAGCGTCCACGTGT------------------------------CTGTCGGCATGTGGCGTCC
GCGCTGGACGTGGGACGGCGGGGCGACGGGGGCAGATGCATGCATCCATACATGATCCACGTCCGCGGCTCTGGCCCTGG
TCGGTGCCGCTGG-----------TGGTCACCCTCGAATCGGTCGACCGGAGATCGGTTCGGTGCTGGTCAATGGGCTGG
CCGGTGTGGCCGGTGTGATAGTAGTGATATCATGGTGGTTGCTCCACTAACCGTTGTTAACTGACACTCACATGCGTATG
GTATGCGTGTCGTGTGTG---GATCCGTGGCCGATTATTCTACTCTAC-------TGGTCGGTAATTTCAGAGCAGACAT
TCCATCCATCGTGTCGGTCGGTCCATCTCTGCCTGCCGACGAGCTTGGGC-TTGCTTGATTGTTGGCCTGC---------
-------------------GTGCGGCCAGTGGCGCCGCGTCCAATCCAACACAGCGGCAGCGCGTGTGCTGTCCCTTCTC
GTCTCCGTTTAGTCTGTCCGCGCGCGCACTCCGAGTGCCGGAGGAAAAGTGGTGGGAACCCGTATGCTGGTCCGGCCGAC
ACGTGCCCACTCG-----------------CCCACACGGCTCAACGTTACAAAAGGGAGGGAGCGGCAAACG--------
-------ACCGGAACGCGCGCACACAACACGGTCACTAGCATCGATCGCCCTGCCTTTTCACTTTTTCAGCCATGCTCTC
CACGGCCCGCGCGGTGACCTCGCCCGCCGCGTGCGCTGCCCAGCACCAGCAGCATGGCGGGAGCCGGTTCGTCGTGTTCC
TGGCCGGCGATGACGGGAGGGGAGCTGCCGGTTCCAGCAGCGTGCGTGCGCCGAGGCCGCGCTCTGTGGCAGCGCGTGCC
GCCGGCTCGTCCAACCACGCTGTCTGCCTCGAGGCGGCCGCGCCGTGGAGCATGGACTGTGTCGCGGCGCCGGCGACCGT
GTCGTACGAGGAGAGCGTGCGCCAGGTCGTGCTCAAGCAGGCGGCGCTCGCGGCCTCGACCACGCCGAGGAAGGCGCGGC
ACGCCGGCCGTGACGCCGGCGTGCTGGACGCGGCCTTCGACCGCTGCGGCGCGGTGTGCAAGGAGTACGCCAAGACGTTC
TACCTGGCCACGCAGCTGATGACGCCGGAACGGAGGCGGGCGATCTGGGCGATATACGGTAAGCACT--CGTCGATCGCG
ACATGCTGCCACTAGCT----TCCACGTTGGTGGACGCAACGCAAGTACGCAACAGCAGGAGGTCATTGATGTGGTTA--
-ACTTCTTGGATGCGTCGCGCATGCAGTGTGGTGCCGGAGGACGGACGAGCTGGTGGACGGCCCGAACGCGGCGCACACG
TCGGCGCTGGCGCTGGACCGCTGGGAGTCGCGCCTCGACGGCGTCTTCGCCGGCCGGCCCTACGACATGCTCGACGCGGC
GCTGGCCGACGCCGTGGCCGCCTTCCCGGCGGTCGACGAGCGGCCGTTCCGGGACATGGTCCAGGGGATGCGCATGGACC
TCGCCAAGTCCCGCTACGCCACCTTCGACGAGCTCTACCTCTACTGCTACCGCGTGGCCGGCACCGTGGGGCTCATGACC
GTCCCCGTCATGGGTGTCTCCCCGGGCTCCCAGGCGGACGTGGAGACGGTGTACGCCGGCGCGCTCGCCCTCGGCGTCGC
CAACCAGCTCACCAACATCCTCAGGGACGTCGGCGAGGAGTAAGTGTCTGTATAG---------TATGTTGC-TTCTGAA
TTCACGCGCTCTTGCCGATGACTGCTCATCTCTGACACCGCCATTGTTGCACAGTGCGAGGAGGGGAAGGATCTACCTGC
CGCAGGACGAGCTAGCCATGGCCGGCATCTCCGAGGCGGACATCTTCGCCGGCCGTGTCACCGACGAGTGGAGGAGCTTC
ATGAAGGGACAGATCGCGAGGGCCAGGGCCTACTTCAAACAAGCCGAGCAAGGCGCCGCCGAGCTCAACCAGGAGAGCCG
ATGGCCGGTACGCGCGCGA--------------------------------------CAAAAGTTCCATCAAAAAATTCA
AAAATTCTCAGCCAAAAATGTCAAATTCAGTAGTCTAAGTAAGTTTCAGATTAACATGTAATACGATTTGCATGCAGGTG
TGGGCATCTCTGCTTCTGTACCGGCAGATCCTGGACGAGATCGAGGCCAACGGCTACGACAACTTCAGCAAGCGGGCCTA
TGTTCCCAAGGCCAAGAAGCTGGCGGCGCTGCCCAAAGCTTACCTCAGGTCCCTCATGCCTCCTCCTTCTTCGCAGAGGC
GCCGTTGATCAGTTAGCTCTGATCCTCTAGTGTACTACTCCCTCCGTTCCCAAATATAAGTCTTTCTAGAGATTCTAACA
AGTGACTACATACATAGAAAAATGAGTGAATCTACACTTTAAAATATGTCTATATACATCCGTATGTTATTGTCCATTTG
AAATGTCTAAAAAGACTTATATTTAGGAATGGAGGGAGTAGTACTGTATATAGCAGTGATGTACAGTACAGATTTAAGCT
AGGCCTTGTGAGTATGTTTTTTTTTTTTGCAATGTACAAAGTGTTGAAGAAAAATTATGTGCTTGTTAGAAAATGATCTT
GGTGAAAACAGAGATGTATTCATTGTAGATGGTCATCTTGGCGAGCTGGGT-GGGGTATCTATCTGCAGGGAGGCCTACA
TCATGCAATCACTAATTATTTAGTCCACGGTACTGAAAATGGCAAGTGATTGGTCCATTTGATTG-------------TA
TATGAAATGTTGTTCTTGTCAGCATAGTTGTTGAGCATGAGCTCACCAAGAAAGATTTCCATCCCTCGAGTCAACATGCC
AGTTTATAGAAATATAACGAGTACAGATGGCATCGTTTGGTACTGCAAGAATCATATTCATACCAGCATGAGCTCACCAA
GATCTTGAGCAGTACTTCCCGAACCATCAAGTGTTAAATAGGAAACTGTATTTTGGTCGTGTGGT---------TGCAAC
TAAGAGGAGGAAACACAAAGATACCCTCAACGACACCTTGTCTAGACTTATTTTTCGAGAGCCTCGGCGCACAAAGAACG
AGCTCCATTCACTAGAGGTAGGTCTTTGAAGTGACCGCTGAATCTT---------------------AACCTAGAAGCTT
CTGAAATTACTCCAACAGTGTAGGGGTCCTCACAACTGAGGATCACGATTTGGTTCGATGAAATCTTGG-ATCAAGGCCT
CCTCTTACTTTCCCCACATAGAGTTTTTAACTTATTGTATTAAGCTTTTCTTAGGTCACTAATGTTGTTTAGCTTAAATC
CAAAATTAATTAT-------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr5B_195
CCAGCACGCA----------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------CACCCGGCCGGCGTCCGAGATCGCTACAGCAAAAAATA
AAAAGAAGACAACAACAAGCCACGAGAGCGGACAGGATATGCTCAATCATGCATGGTGCACCCCGC---CCCCACCAGGT
GCTCCTTGTCTCCGTTCCAGCGTCCACGTGTCTGTCAGCCCGGCTCGATGGTCACCGCCCCCTGCCGGCATGTGG---CC
GCGCTGGACGTGGGACGGCGAGGCGACGGGGGCAGATG----CATGCATCCATGATCCACGTCCTCGCCTCTGGCTCTAC
CTCTGGCTCTGGTCGGTGGTGGTCTGGTCACCATCGAATCGTTCGTTC--------GTTCGGTGCTGGTCAATGGCCTGG
CCGGTGTGACACTCATATGG-----------ATGGTGGTTACTCCACTAACTGACAGTAACAT--ACTCACATGCATAGA
TCTGCGTGTGTGGATCTGTGCGATCCATGGAGGATTATTCCACTGGTCGATCATATGGTCGGTAAATTCCTA--------
--CATCCATCGATCGTGTCGGCCCATCTCCGCCTGCCTCAAGCTTGCTCGATTGATTGTTTGTTGGCAACAGAATATCCG
TCCATCCGGCCTGCGTGCAGTGCAGCCAGTGGCGTCGCGTCCTGGCGTCCAATCCAACCGACACGCGG------------
-----------GTCAGTTCGCGCGCGCACTGGAGAAAAGTGGGCGGGTGCCCATAT---CCATATGCTGATCCAGCCGAC
ACGTGGCCGCTCGCCGCTCGGCCACACCCACCCACACGGCTCGACGTTACAAAAAGGCCGCTACCCAGGACCAAGGAGTA
GCAAGCCACCGAAACGCGCGCACACAACACAGTGACCAACATCGATCCGGGATCGTTCTAGCTTTTCCAGCCATGCTCTC
CACCGGCCGCGCGGTGACCTCGCCCGCGC---GCGCTGCCCAGCACCGGTTCATGGGCGCACCGAGGACGGTGGTGTTCC
TCGCCGGCGACCACGGGAAGCGAGCTGCTGCT------------------------------TCTGTGGCAGCGCGCGCC
GCGGGCTCGTCCCACCCCGCTGTCTGCCTCGAGGCGGCCGCGCCATGGAGCATGGACTGTGTCGCGGCGCCGGCGACCGT
GTCGCACGAGGAGAGCGTGCGCCAGGTCGTGCTCAAGCAGGCGGCGCTCGCGGCCTCGACCACGCCGAGGAAGGCGCGGC
TCGCCGGGCGCGACGCCGGCGTGCTGGACGCGGCCTTCGCGCGCTGCGGCGCGGTGTGCAAGGAGTACGCCAAGACCTTC
TACCTGGCCACGCAGCTCATGACGCCGGAGAGACGGCGGGCGATCTGGGCGATATACGGTAAGGCCCCCCGTCGATCGCG
ACATGCTGCCACTAGCTAACTTCCACGTTGGTGGACGCAACGCAA--------CAGCAGGAGGTCACAGATGTGGTTACT
AACTTCTTGGATGCATGGCG----CAGTGTGGTGCCGGAGGACGGACGAGCTGGTGGACGGCCCGAACGCGGCGCACACG
TCGGCGCTGGCGCTGGACCGCTGGGAGTCGCGCCTCGACGGCGTCTTCGCCGGCCGGCCCTACGACATGCTGGACGCGGC
GCTGGCCGACGCCGTGGCCGCCTTCCCGGCCGTCGACGAGCGGCCGTTCCGGGACATGGTCCAGGGCATGCGCATGGACC
TCGCCAAGTCCCGCTACGCCACCTTCGACGAGCTCTACCTCTACTGCTACCGCGTGGCCGGCACCGTCGGGCTCATGACC
GTCCCCGTCATGGGCGTCTCCCCGGGCTCCCAGGCGGACGTCGAGACGGTGTACGCCGGCGCGCTCGCCCTCGGCGTCGC
CAACCAGCTCACCAACATCCTCAGGGACGTCGGCGAGGAGTAAGTGTCAGTTCAGTTGTATATATACCTCGCTTTCTGAA
TTCACCTGCTCTTGCCGCTGCCCGCTCATCTCTGACGCCGCCATTGTTGCACAGTGCGAGGAGGGGCAGGATCTACCTGC
CGCAGAACGAGCTGGCCACGGCCGGCATCTCCGAGGCGGACATCTTCGCCGGCCGCGTCACCGACGAGTGGAGGAGCTTC
ATGAAGGGCCAGATCGCGAGGGCCAGGGCCTACTTCCAGCAGGCCGAGCAAGGCGCCGCCGAGCTCAACCAGGAGAGCCG
ATGGCCGGTAAGTGCGACGGACACTTACGCATGACACTTTCTTCTTCAATCACCTCGCAGAAATTCCATCAA--------
-----------------------------------------------AGATTAACATGTAATTTG---TGCATGCAGGTG
TGGGCATCTCTGCTTCTGTACCGTCAGATCCTGGACGAGATCGAGGCCAACGGCTACGACAACTTCAGCAAGCGGGCCTA
TGTTCCCAAGGCCAAGAAGCTGGCGGCGCTGCCCAAAGCTTACCTCAGATCCCTCATGCCCCCTCCTT---CGCAGACGC
GCCGTTAATCAGTTGGCTCTGACCCTCTAGTGTAATGATGAC---------ACACAGAGAGCAGATCCTTGTACTAGTG-
--------------------------------------------------------------------------------
------------------------------------------------TATAGCAGTGATGTACAGTACAGATTTAAGCT
AGACCTTGTGAGTAAA-TTTTTTTTTTTGCAATGTACAGAGTGTTGAAGAAAAATTATGTGCTTGTTAGAAAATGATCTT
GGTGAAAACAGAGACGTATTTACTGTGGATGGTCATCTTGGTGAGCTGGGTGGGGGTATCTATCTGCAGGCAGGCCTACA
TCATGCAATCACTAATTATTTAGTCCACTATACTGAAAATGGCAAGTGA-------------TTG-------------TA
TATGAAATGCTGTTCTTGTCAGCATAGTTGTTGAGCA-----------AGAAAGATTTCCATCCCTGAAGTCAACATGAC
ACTTCATAGAAATATAACGAGTACAGATAGCATCGTTTGGTAGTGCAAGAATCATAATCGTACCGGCATGAGCTCACCAA
GATCTTGAGTTGTGCTTCCCGAACCATCAAGTGTTAAATAGGAAACTGTATTTTGGTCGTGTGGTTGAAACTAGTGCAAC
TGAGAGGAGGAAACACAAAGATACCCTCAACGACACCTCGTCTAGCCTTATTTTTCAAGAGCCTCGGCACACGAAGAACG
AGCTCCATTCACTAGAGATAGGTCTT-GAAGTGACCGCCGAACCCTTACAAGCTTCTAGAACATTTCAACCTAGAAGCTT
CCGAAATGGCTCCAACAGTCCAGGAGTCCTCACAATTGAGGATCACGATTTGGTTCGATGAAATCTTGG-AT-AAGGTCT
CCTCTTACTTTCCCCACACAGAGTTTCTAACTTATGGAATCAAGCTTTTTTTAGGTCACTAATGTTGTTTAGCTCAAATC
CAGAATTAACTATGAATAAATGGCAGATTAGATCGCAACCTAATTGGACTCACATGTCATG----------------GCA
TTTACCTAAGATTACCACTCCTTATGGGTTTGAGAATATACTGGTTGCAGACAAGTGGGGCATGTTGTAATTTATGGCCC
ACCTGCCAACAAATGAAGACATAAGTCTTGCCCGGAGGATAGATCAATTCAAGTGTTGAGAAGCCCAAGCTTGAAGTAGA
ATTTCATCCTATGGGGTTCGACATAAGACAGAGAGCAGAGTGAAATGAAACAGAGATGTACTCATTGTGGAAGGTCATCT
GAATTGGGTCGGGTATCTATCTGCAAGCCTACATCCATCATGCAATGACTAATAATTTAGTCCACTCTACGGAAAATGGC
AAGTGATTGATTCATTCGATTGTATATGAAATGTTGCCCCTATCAGCATAGCTGTCAAATTTGGTTAGCAAAGCTGACAA
ATTTGGTTAGCCAGAAAGATTTCCATCCTTGAAGTCAACATGCCAGTTTAGAAATATAACAAGTATAGATGGCATCGTTT
GGTACTGCAAGAAT------------------------------------------------------------------
--------------------------------------------------CATATTCATATCATATCATATCATATCAGT
ATGAGCTCACAAAGATCGTGGTTGTACTTCCCCAACCGTC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------AAGTGCTAAATAGGAAACTGT
ATGTTGGCCGTGTGGTTGAAATTAGTGCAACTGAGAGGAGAGGGAAACAGAAATATACCATCAACAACACCGTGTCTAGC
CTTCTTT-------------------------------------------------------------------------
--------------------------------------------------------------------------
>chr5D_1151
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--------------------------------------------------------------TCTGTGGCAGCGCGCGCC
GCCGGCCCGTCCCACCCCGGTGTCTGCCTCGAGGCGGCCGCGCCGTGGAGCATGGAGGACGTCGCGGCGCCGGTGACCGT
GTCGTACGAGGAGAGCGTGCGCCAGGTCGTGCTCAAGCAGGCGGCGCTCGCGGCCTCGACCACGCCGAGGAAGGCGCGGC
TTTCCAGGCGCGACGCCGGCGTGCTGGACGAGGCCTTCGACCGCTGCGGCGCGGTGTGCAAGGAGTACGCCAAGACGTTC
TACCTGGCCACGCAGCTCATGACGCCGGAGCGGAGGCGGGCGATCTGGGCAATATACGGTAATCCAC-------ATCGCC
ACATGACACTGATGCAA--------------------------------GCGACGAGAGGAGATGATTGATGTGGTTACT
AACTTCTTGGATGTGTCGAC----CAGTGTGGTGCCGTAGGACGGACGAGCTGGTGGACGGCCCGAACGCGGCGCACACG
TCGGCGCTGGCGCTGGACCGCTGGGAGTCGCGCCTCGACGGCGTCTTCGCCGGCCGGCCCTACGACATGCTCGACGCGGC
GCTGGCCGACGCCGTGGCCGCCTTCCCGGCCGTCGACGAGCGGCCGTTCCGGGACATGGTCCAGGGCATGCGCATGGACC
TCGCCAAGTCCCGCTACGCCACCTTCGACGAGCTCTACCTCTACTGCTACCGCGTGGCCGGCACGGTCGGGCTCATGACC
GTCCCCGTCATGGGCGTCTCCCCGGGCTCCCAGGCGGGCGTCGAGACGGTGTACGCCGGTGCGCTCGCCCTCGGCGTCGC
CAACCAGCTCACCAACATCCTCAGGGACGTCGGCGAGGAGTAAGTGTCAGTTCAGTTGTATATATACGTTGC-TTCTGAA
ATCAC----------------CTGCTCATCTCTGACGCCGCCGCTGCTG-ACAGTGCGAGGAGGGGCAGGATCTACCTGC
CGCAGGACGAGCTCGCCACGGCCGGCATCTCCGAGGCGGACATCTTCGCCGGTCGCGTCACCGTCGAGTGGAGGAGCTTC
ATGAAGGGACAGATTGCGAGGGCCAGGGCCTACTTCCAGCAGGCCGAGCAAGGCGCCGCCGAGCTCAACCAGGAGAGCCG
ATGGCCGGTAAGCGCGCGA--------------------------------------CAGAAGTTCCATCAGAAAATTC-
AAAATTCTCAGCCAAAAATGTTAATAG-AGTAGTCTAAGTAAGTTTCAGATTAACATGCAATACAAATTGCATGCAGGTG
TGGGCATCTCTGCTTCTGTACCGGCAGATCCTGGACGAGATCGAGGCCAACGGCTACGACAACTTCAGCAAGCGAGCCTA
CGTTCCCAAGGCCAAGAAGCTGGCGGCGCTGCCCAAAGCTTACCTCAGGTCCCTCATGCCTCCTCCTTCTTCGCAGAGGC
GCCGTTGATTA---------GATCCTCTAGTGTAAGTGTAACAGTAACACTACAGAGAGAGCAGAGCCTTGTAGTTGTA-
--------------------------------------------------------------------------------
---------------------------------------------GTATATAGCAGTGATGTACAGTACAGATTCAAGCT
AGACCTTGTGAGTACG--TTTTTTTTTTGCAATGTACAAAGTGTTGAAGAAAAATTATGTGCTTGTTAGAAAATGATCTT
GGTGAAAACAGAGATGTATTCATTGTGGATGGTCATCTTGGTGAGCTGGGT-TGGGTGTCTATCTACAGGCAGGCCTACA
TCATGCAACCACTAATTATTTAGTCCACTGTACTGAAAATGGCAAATGA-------------TTGATTCATTTGATTTTA
TATGAAATGTTGTTTTTTTCAGCATAGTTGCTGAGCATGAGCTCACCAACAAAGATTTCCATCCCTGAAGTCAACATGCT
AGTTTATAGAAATATAATGAATACAGATGGCATCGTTTGGTACTGCAAGAATCATATTCATACCAGCATGAGCTGACCAA
GATCTTGAGTTGTACCTCCGGAACCATCAAGTGTTAAATAGGAAACTGTACTTTGGTCTTGTG-----------------
---GAGGAGGAAACACAAAGATACCCTCAACGACACCTTGTCTAACCTCATTTTTCGAGAGCCTCGGCA-ACAAAGAACG
AGCTCCATTCACTA-AGGTAGGTCTT-AAAGTGACCGCTGAACCCTT-----------------TTAAACGTAGAAGCTT
CCGAAATAACTCCGACAGTCTAGGAGTCCTCACAATTAAGGATCACGATTTGGTTCGATGAATTTTTTTTATCAAGGTCT
CCACTTACTTTTTCCACACACCGTTTAA--------------------------GTCAGTAATATTGTTTAACTCAAATC
CAAAATTAAATATGAATAAATGGTGGATTGGATCGTAACCCAATTGGACTCACATTTCATAGTAGCTGTAAAAATCCGCA
TTTACTTAAGATTACCACTCCTTATTTTATTTT-----------------------------------------------
---------------------------TTGTCCGAAGGATATATTAATTCAAGTATTGAGAAGCAAGCTTGAAAAATCC-
----------ATTGGGTTCGACATAATACATAGGGCATCAACATGATCTTTCTTACATAATTTTGAGATCAGAGTTAAAG
TATTTTATTCTCCATGCTCTTCTAACACAACTAACAACTAAGGAAACAAAAGATTGTGTCGTCGACATTTAGTCAACTTA
TACAGTCAATATATGCACGAGGGATTTCATAAGATTGTCAAATCTCTGAAGTCAAATCTCTAAGATCGGTATATTTTTCC
TAAAGAACACAACAACGAGTAAAATTATGTTGTTCTTATTAATTGAATCATTGCAAAGGTTCTCACTTATTTGTAGTAAA
CTTTTTTATTTCGTTACAATTGTTCATGTCAATAAATTAATGATAAACTTATTTTTTTTATACACATTTTGTTATAATAT
GTTAAATATCTATTTTCCAGGTATAGATACTAATATTCTTGATGTAATCACATTTTCATAATATATCATATATATTTCTC
ATACAATTTTTTTAAACCTTTCTCATACAATTATTAAACATACATTTCCTTATGATAAATTGAAGTTAGAAACATATAGA
TAACTATACATATACCTACATTAAACATGTCCCACAACTAGGCAGGTGATTTCTCAAGTTAGTCTGGCCACTCTAGATCA
ACCCACTGGACACTTCCATAGTTTTTGCCTTGCTCCAAAAATAGACAAACAGTGTTTTTAAATTGTGTCTAGTGTCTGCT
TGCTTATACACTAAATTACCCACACACTAAATTATCTACACACTGGGCATCTTTGCTTCTGTACTGGCATGCTGGGGCGG
AGCCAGCCAAGCAGGCCGCCCCGAGCCGCCTTAATATACTGTAGCAGACATGTACAACAAAATGCTACAGTGCACAAAGA
ATCTGGGCCTTGCACCTCAGGCTTGCGCCTCAGGCCTGGGCCCTGGGAGCCTGTCTCCGCCACTACTGGTAGATCTTGGA
CGAGATCGAGGAACGGCTACAACAACTTCAACAAGAGGGCCTATGTTCCCAAGGCCGAGAAGCCGGCGGCGCTGCCCAAA
GCTTACCTCAGGTCCCTCATGCCTCCTCCTTCGCAGAGGCGCCGTTAATTGGTTAGCTCTGATTCTCTAGTGTA
>SNPs
SSS---S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------S----SS
---SS---S-S----S--------------------------------------S---S--S-SS-SSS-----------
--------------SS------------------------------------------------S----------SSS--
--------------------S-----------------SSSS---S---S--------------S--S-------S--SS
SSSSS--SSSS-S-------------------S--------S---SS-SSSSSSSS-------------------S----
--------S-SSSSS-SSSSSSSSSSSSSSS---------S----------S-SSSS----SSSS----------S--SS
SSSSSSSSSSS-SS-S----------S---SS--------S---SSS------------------S---SS-SSSSSSSS
SS---------SSSSS-----S-------S-------SSSSSSS-SSSSS----S---S--------SSSS---------
-----------------------S----------S-------SSS-SSS--SSS-SS-S-SSSSSSS-SSSSSSSSSSSS
SSSSSSSSSSS---S--S------------SSSSSSSSSS-S-SSSSS-SSSSSSSSSS--S-------S---S------
-----S--S---------------------------------S-----------S--SS-SSS-SSSSS--S--------
-----------S------------------S--S--S-S--------SSSSSS-S--S-SS-----S-------------
---S-S---------------------SSSSS---------------S-SSSSSS----SSSSSS--SSS--S-------
-S--------SS------S-S-------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S---
------------S---S---------------------------------------------------------------
--------------------------------------------------------------------------------
S------S--S---------------------------------------------------------------------
-----------------S-----------S----------------------------------S-S-------------
---------------------------------------------SSSS--S----------------------------
--------------------SSSS--------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-----------------------------------S-------------
-------------------------------------------------------------------S------------
--------------S--------------------------S--------------------------------------
------------------------------------------------S--SS-------------S-------------
-----SS----------S--S---------------S-----------------------------S-------------
-------------S----S------------------------------------S------------------------
------------------------------------S-S--S--------------------------------------
----------S------------------------------------------------S-------------------S
---------------------S--SSSS--------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-------------------S-SS-SS-SSSSSSS-S-S-S-S-SSS-SSSSSSSS-SSSS-SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------
--S-----------S-S---------------------------------------------------------------
--------------------------S--------------S----------------------------S---------
----------------------------S--------------------SSSSSSSSSSSSS------------------
------------------------------------------------------------------SS------------
--------------------------------------------------------------------------------
---------SS---------------------------------------------------------------------
-S-------------------------------------------S----------------------S-----------
--------------------------S---------------S-S-----------------------------------
-S-----S-----------S----S----------S-----------------------------------------S--
------------------S-------S--------S-S--S--------S------------------------S-----
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_791
--------------------------------------------------------------------------------
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---------------------------------------------------TTGCTTGATTGTTGGCCTGC---------
--------------------------------------------------------------------------------
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>reverse_2181
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------ACTGCTCATCTCTGACACCG----------------------------------------
--------------------------------------------------------------------------------
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>forward_885
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------GTGCTGTCCCTTCTC
GTCTC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2755
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------CTACTCCCTCCGTTCCCAAA--------------------------
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