>input_sequence_48316
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-------ATGCCCCACAGGGACCACTTCTCCTGGTCCGCCATCGTCTCCGCCTACTCCCGCCACGGCCGGCCCCTCGACG
CGCTCGCGCTCTACCGCCGGATGCAGGAGGAGCCTGGGAACGCCGGCGCCGACAACCAGTTCACCGTGTCCAGCGCGCTC
GCCGCGGCCACAGCCGCCCGGTGCGCCCGCGCGGGCAGGGAGCTGCACTGCCACGTGGCCAGGAGAGGGATCGGCGTGGG
CGATGCCGTCATGTGGAGCGCGCTCGTGGACATGTACGCCAAGTGCGGCCGGTTGGACGACGCCAGGAGGGTGTTCGACG
CGATGCCGGTCCGGGACGTTGTCTCCTGGACGGCGATGGTGGAGAGGTACTTTGACGCTGGGCGCGCCGGGGAAGGATTC
AGGCTGTTCCTCCAGATGCTGAGAACCGGAGGTGTTCGACCGAATGAGTTCACCTACGCGGGGGTTCTGCGTGCTTGTGC
AGAGCTCGCCGTCGAGAGCCTCGGGAGGCAGGTGCATGGTCGAATGTCAAAGAGCAGCATCGGAGACTCGTGCTTTGCAG
AGAGTGCGCTCCTGCACATGTACTCCAAGTGCGGGGACATGGCCAGTGTGGTGCGTGTATTCGAGGGGATGGCAAAGGCA
GACCTGGTGTCGTGGACAGCGATGATCTCTGGCTATGCGCAGAATGGTCAGCCAGAGGAGGCGTTGCGCTACTTCGACAT
GTTCTTAAGGTCAGGAATCAGGCCTGATCATGTCACGTTTGTTGGTGTTCTCTCTGCTTGTGCTCATGCTGGTCTGGTCG
ACAAAGGTCTGGAGGTCTTCCATTTGACAGAGGATAAGTATGGCATTGCGCACACCGCTGATCATTATGCTTGTGTGATC
GATCTCCTCAGCCGATCAGGCCAGTTTGAACGGGCAGAGGAGATGATCAACAAGATGGCTGTCAAGCCTAACAAGTTCCT
GTGGGCATCCTTGCTTGGTGGCTGCCGGATTCATAAGAATGTGCACTTAGCTAGGCGGGCAGCGGAAGCGTTGTTCGAAA
TAGAACCTGAAAATCCTGCGACGTATGTTACTCTAGCTAATATTTATGCATCGGTCGGTCTGTTTGATGAAGTTGAGGGT
GTAAGAAAGATCATGGAGACAAAGAGCATAACGAAAATGCCAGCCTCAAGTTGGATTGAAGTTGGAAGAAGGGTGCATGT
ATTTCTGGTCGGTGATAAGTCGCATCCTCGAACTGAAGAAATATATGCGCTTCTGAAGAAGCTGTATGGGAAAATGAGGG
AAGAAGGGTATGTAGCGGACACCGGATTTGTTCTCCATGATGTCGAAGATGAGCAAAAGGAGCATGACATTGGCTACCAC
AGCGAACGACTTGCTGTTGCATTTGGGATCATTGCTACCCCCGAGGGTTCCCCGATCAAGATTTTCAAGAATCTGCGGAT
CTGTGGGGACTGTCACACTGCTATTAAGCTCATATCACAGATTGCTCAGAGAGAGATCATCGTAAGGGACTCGAATATAT
TTCATCACTTCAAGGACAGGGTTTGTTCTTGCAGAGACTATTGGTAA---------------------------------
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>chr4B_1_TraesCS4B01G232200
TGTTGTTTGTTTCATCAGTGTTCTAGCTTAATGCAAAAAAAAAACATCAGATAGATAATCCTGCTCTCTCCTGTTGTATA
GGTTGTTCTTGTTTTTTTTTTC----AAACAGAGATAAATGTTGCATTTGATTATTGTTTACAAACTATG---TGTTGAA
CTATTGGCGATAATGTGTTGCACACCACTCATTTGTTCTGCTGGAATGATGCAAAGCAAGGCAT--AGTTC-AGCTTGCC
TACTGTACAGAAGAATGCTAG--------------------------------------------------------TGT
TATTAATTTTACTGGTTTCATAGGCATACGATAAGTGAAAAATCATACCACTATCCAAATCTGTACCAAAAACCGTTGAA
AATCAGATGTTGTACATTTTCAAACTGAAGGACCC-------------------------------------------AG
CAATTTTGCC-------TTATGTTTGAGAAGTTTAGTACCCTGAGGACGGCAACTTTAGTTGTGAAGCATGGCAACTTTT
TGTTTGAATGACAAG----------------TTCCTTTTTTGTTTCGGATGGTAATTTTAGTTGTAAAAACGTCAGAACG
GTGGTGTTACTTCATGCCATTGTC--------------------------------------------------------
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------------------------ATTTGAAACAAGTTTTGGACAGTTCGTAGGGCGCTG--------------------
-------------------------------------------------------CGATCCTCACTGCCGTCCTGTACGG
AGAGCTAGACGCAACTGCAGTGCAGTCTCGCTGCCGCCACCGCCCACCATGCATGCCGACGCCATTGCCACTATCCATCC
ATGAGGACCAAGCCCCCGACCTTCTCGGTCACCACCGCGTCGCAGCTCCACGACGCCATCGACCGCCTCCTCCCGCTGCT
CCGCGCCGACCCCGCCCACGCCCCGGCCGCGCGCGCGCTGGCCGCGGCCGCCGCCTCGCTCCAGCCCTCCACGCTGCTTT
CCAACCGCCTCCTCCACCTCCTCTCCTCCCACCCGGCCTCTCTCCCCGACGCCCTCTCCCTCTTCTCCTCCATCCCGAGC
CCCGACCGCTGCTCCTACAACACCCTCATCGCCGCGCTCTCCCGCTTGCCGCGCCACCTCGCCTCCGCGCGCGCGCTGTT
CGACCGAATGCCCCACAGGGACCACTTCTCCTGGTCCGCCATCGTCTCCGCCTACTCCCGCCACGGCCGGCCCCTCGACG
CGCTCGCGCTCTACCGCCGGATGCAGGAGGAGCCTGGGAACGCCGGCGCCGACAACCAGTTCACCGTGTCCAGCGCGCTC
GCCGCGGCCACAGCCGCCCGGTGCGCCCGCGCGGGCAGGGAGCTGCACTGCCACGTGGCCAGGAGAGGGATCGGCGTGGG
CGATGCCGTCATGTGGAGCGCGCTCGTGGACATGTACGCCAAGTGCGGCCGGTTGGACGACGCCAGGAGGGTGTTCGACG
CGATGCCGGTCCGGGACGTTGTCTCCTGGACGGCGATGGTGGAGAGGTACTTTGACGCTGGGCGCGCCGGGGAAGGATTC
AGGCTGTTCCTCCAGATGCTGAGAACCGGAGGTGTTCGACCGAATGAGTTCACCTACGCGGGGGTTCTGCGTGCTTGTGC
AGAGCTCGCCGTCGAGAGCCTCGGGAGGCAGGTGCATGGTCGAATGTCAAAGAGCAGCATCGGAGACTCGTGCTTTGCAG
AGAGTGCGCTCCTGCACATGTACTCCAAGTGCGGGGACATGGCCAGTGTGGTGCGTGTATTCGAGGGGATGGCAAAGGCA
GACCTGGTGTCGTGGACAGCGATGATCTCTGGCTATGCGCAGAATGGTCAGCCAGAGGAGGCGTTGCGCTACTTCGACAT
GTTCTTAAGGTCAGGAATCAGGCCTGATCATGTCACGTTTGTTGGTGTTCTCTCTGCTTGTGCTCATGCTGGTCTGGTCG
ACAAAGGTCTGGAGGTCTTCCATTTGACAGAGGATAAGTATGGCATTGCGCACACCGCTGATCATTATGCTTGTGTGATC
GATCTCCTCAGCCGATCAGGCCAGTTTGAACGGGCAGAGGAGATGATCAACAAGATGGCTGTCAAGCCTAACAAGTTCCT
GTGGGCATCCTTGCTTGGTGGCTGCCGGATTCATAAGAATGTGCACTTAGCTAGGCGGGCAGCGGAAGCGTTGTTCGAAA
TAGAACCTGAAAATCCTGCGACGTATGTTACTCTAGCTAATATTTATGCATCGGTCGGTCTGTTTGATGAAGTTGAGGGT
GTAAGAAAGATCATGGAGACAAAGAGCATAACGAAAATGCCAGCCTCAAGTTGGATTGAAGTTGGAAGAAGGGTGCATGT
ATTTCTGGTCGGTGATAAGTCGCATCCTCGAACTGAAGAAATATATGCGCTTCTGAAGAAGCTGTATGGGAAAATGAGGG
AAGAAGGGTATGTAGCGGACACCGGATTTGTTCTCCATGATGTCGAAGATGAGCAAAAGGAGCATGACATTGGCTACCAC
AGCGAACGACTTGCTGTTGCATTTGGGATCATTGCTACCCCCGAGGGTTCCCCGATCAAGATTTTCAAGAATCTGCGGAT
CTGTGGGGACTGTCACACTGCTATTAAGCTCATATCACAGATTGCTCAGAGAGAGATCATCGTAAGGGACTCGAATATAT
TTCATCACTTCAAGGACAGGGTTTGTTCTTGCAGAGACTATTGGTAATCTATGCTGCATATGTGGATAGGTTTGGCTTCT
GATATATAGGCAACTATTATCCATCTTTTCATGGCTAAAGTCAATGTGCATCATCTATTGATCTAGCAGCTGGTGTCACA
TGAAGTTATT----------------------------------------------------------------------
------------------------------------------------------GCAAT-CCAGGCTCCAAGAC----CC
CTTATCAAGCTGCTATTAGGAAAATGGCCTCCAAATTTTGTAGCTCCGATACCTTGGACAATTTCTCTGCTCTGTTCAAA
GGTTAAGTTATATGCGTACATGTTTTGCTTTCTTGTATTATAAATTATCTTGTAAAGATGAGCATTTTGTACAACTGGTT
TGCTAGAAATGATCAACCAACAAAAACCCTGTCTTTGTTTGGCAAATCAGAAGGAAATTATACTTCATAAAGTTGGATTT
GATTTCAGAATTGTGGATGCTCTAAATTTCCCATATGCAATGTTTCCCTCGTGCACGAGCATGCTACCCACAATTATCAG
TACATCAGTGAACAACATGAACAACGTGATGCTTTGAAACAGGTATAACTCTCATGGTACTCATTTCATACAAAACCGAA
CCACCAAAGTA-TAAAAAAATCACTAGAAGAATTGCAAGAGAAACCCAATTGTAAGTCTTTTCTTGAAAACTTGCTGAGG
AGGGTAGCTGTCAGTTTGGTCTATACAATGCATTGCCTCCATGAATATG-AATCTGGAAGTACAGAAAACTGATTTTTAC
AGTAACTAGAACCATCACACATTCTTATATTTGTATCTCATTGCGCAACCAATGTAAACCAGCAAATTTACAAAGCTGAT
CCCTGCCATCAACCAAAAGAACCGGTCAAGATGGCCTTCATTCAAATTATCTGGGATCCATCCTGCATCCCCTCCTTGAG
TTGTAAGGTATGACACCAAGGTCAATATGATTGAGCTTAAATAGCTTCCCAACGTGACCGTAACAAGTGCCAATGCAGCA
CATAAGCTCCTCATGGCATCTGGGGCCTGACCATAGAAGAACTCAACTTGACCTATAG----------------------
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>chr4D_1
TGTTGTTCGTTTCATCAGTGTTCTAGCTTAATGCAAAAAAAGAACATCAGATAGATAATCCTGCTCTCTCCTGTTGTATA
GGTTGTTCTTGTCAATTTCTTTTTGAAAACAGAGATAAACGTTGCATTTGATTGTTGTTTACAAACTATGTGTTGTTGAA
CTGTTGGCGATAATGTGTTGCACACCATTCATGTGTTATGCTGGAATGATGCAAAGCAAGGCATCAAGTTCAAGCTTGCC
AACTGTACAGAAGAATGCTATTGTTATTTTTTTTATGCAAAGCAAGGCATCAAGTTCAAGTTCTAGCTTAACGCTATTGT
TATTAATTTTACTGGTTTCATAGGCATACCATAAGTGAAAAATCATACTACTATTCAAATATGTACCAAAAACCGTTGAA
AATCAGACGTCACACATTTTCAAACCGAGGGAGTATCTTATTTGAAGGACCCTGATAACTACCATATGTGTGGCACGAAG
CAATTTCGCCCCGGCGTTTTTTGGCAATAAGTTTAGTTACCCGAGGATGACAACTTTAGTTGTGAAGCATTTCAACTTTT
GTGTTGTAGATGGCAAGTTTCAGTTTCTTTTTTCTTTTCTTTTTTCGGATGGCAATTTTAGAGTTAGAGGATGGGAATTA
AAATGGTACGAGACTTCAAATCTATTGTTTGGTTAGGGGATAGGAAATTTATAAAGGAATAGGCACGTGACTTAAGACTT
TAACTCCCATCGTTTTATTAACAAGGAATTGTTTTAATGAGTTAATCTTAACCCTTCATCATAACTTATATTCTCTTCCC
TGGTCTAGTCCCTCGTCAACCAAACAAGAAAATACAAATTCTTTTCAATTTTCAAACATAATTCTTATCATGTGCCAGGG
ATTAGGGATAAAATGACTCATCCCATGTCTAATCTCAATACAATTCCCTACACTAAACTTCCATTCCCCTTCCTAAATAT
TGCCAAACGCGCTGTCATTTGGGTATTTGAAACAAGTTTTGGACAGTTCGTAGGGCGCTG--------------------
-------------------------------------------------------CGATCCTCGCTGCCGTCCTCTACGG
GGAGGTAGACGCAACTGCAGTGCAGTCTCGCTGCCGCCACCGCCCAGCATGCATGCCGACGCCATTGGCACTACTCATCC
ATGAGGACCAAGCCCCCGACCTTCTCGGTCACCACCGCGTCGCAGCTCCACAACGCCATCGACCGCCTCCTCCCGCTGCT
CCGCGCCGACGCCGCCCACGCCCCGGCCGCGCGCGCGCTGGCCGCGGCCGCCGCCTCGCTCCCGCCCTCCACGCTGCTCT
TCAACCGCCTCCTCCACCTCCTCTCCTCCAACGCCGTCTCCCTCCCCGACGCCCTCACCCTCCTCTCCTCCATCCCGAGC
CCCGACCGCTGCTCCTACAACACCCTCGTCTCCGCGCTCTCCCGCTCGCCGCGCCACCTCGCCTCCGCGCGCGCGCTGTT
CGACCGAATGCCCCACCGGGACCACTTCTCCTGGTCCGCCATCGTCTCCGCCTACTCGCGCCACGGCCGGCCCCTTGACG
CGCTCGCGCTCTACCGCCGGATGCAGGAGGAGCCCCGGAGCGCCGGCGCTGACAACCAGTTCAGCGCGTCCAGCGCGCTC
GCCGCCGCCACCGCGGCCCGGTGCGCCCGCGCGGGCAGGGAGCTGCACTGCCACGTGGCCAGGAGAGGGATCGGCGCGGG
CGATGCCGTCATGTGGAGCGCGCTCGTGGACATGTACGCCAAGTGCGGCCGGTTGGAAGACGCCAGGAGGGTGTTCGACG
GGATGCCGCTCCGGGACGTTGTCTCCTGGACGGCGATGGTGGAGAGGTACTTTGACGCCGGGCGCGCCGGGGAAGGATTC
AGGCTGTTCCTCCAGATGCTGAGAACCGGAGGTGTTCGACCGAATGAGTTCACCTACGCGGGGGTTCTGCGTGCTTCCGC
AGAGCTTGCCATCGAGAGCCTCGGGAGGCAGGTGCATGGTCGAATGTCAAAGAGCAGCATCGGAGACTCGTGCTTTGCAG
AGAGCGCGCTCCTGCACATGTACTCCAAGTGCGGGGACATGGCCAGTGTGGTGCGTGTATTCGAGGGGATGCCAAAGGTA
GACCTGGTGTCCTGGACGGCGATGATCTCTGGCTATGCACAGAATGGTCAGCCAGAGGAGGCGTTCCGCTACTTCGACAT
GTTCTTAAGGTCAGGAATTAGGCCTGATCATGTCACGTTTGTTGGTGTTCTCTCTGCGTGTGCTCATGCTGGTCTGGTCA
ACAAAGGTATGGAGGTCTTCCATTTGATAGAGGATAAGTATGGCATTGGACACACCCCTGATCATTATGCTTGCGTGATC
GATCTACTCAGCCGATCGGGCCAGTTTGAACGGGCAGAGGAGATGATCAACAAGATGGCTGTCAAGCCTAACAAGTTCCT
ATGGGCATCCTTGCTTGGTGGCTGCCGGATTCACAAGAATGTCCGCTTAGCTAGGCGGGCAGCGGAAGCGTTGTTCGAAA
TAGAACCTGAAAATCCAGCGACGTATGTTACTCTCGCTAATATTTATGCATCGGTTGGTCTGTTTGATGAAGTTGAGGGT
GTAAGAAAGATCATGGAGACAAAGGGCATAACGAAAATGCCGGCCTCAAGTTGGATTGAAGTTGGAAGAAGGGTGCATGT
ATTTCTGGTCGGTGATAAGTCGCATCCTCGAACTGAAGAAATATATGCGCTTCTGAAGAAGCTGTATGGGAAAATGAGGG
AAGAAGGGTATGTAGCGGACACCGGATTTGTTCTGCATGATGTCGAAGATGAGCAAAAGGAGCATGACATTGGCTACCAC
AGTGAACGACTTGCTGTTGCATTTGGGATCATTGCTACTCCTGAGGGTTCCCCTATCAAGATTTTCAAGAATCTGCGGAT
CTGTGGGGACTGTCACACTGCTATTAAGCTCATATCGCAGATTACTCGGAGAGAGATCATCGTAAGGGACTCGAATATAT
TTCATCACTTCAAGAACGGGGTTTGTTCTTGCAGAGATTATTGGTAATCTATGCTGCATATGTGGATTGGTTTGACTTCT
GATATA--GGCAACTATTATTCATTTTTTCATGGCTAAAGTCGATGTGCAGCATCTATTGATTTAGCAGCTGGTGTCGTA
TGAGGCTATT----------------------------------------------------------------------
------------------------------------------------------GCAATGCCAGACTCCAAGAGATTGTC
CTTATCAAGCTGCTATTAGGAAAATGGCCTCCAAGTTTTGTAGCTCCAGTACCTTGGACAATTTTTCTCCTCTGTTCAAA
GGTTAAGTTATATACGTACATGTTT-GCTTTCTTGTAT--TAACATATCTTGTAAAGATGAGCATTTTGTACAACTGGTT
TGCTAGAAATGATCAACCAACAAAAACCTTGTCTTTGTTTGGCAAATCAGAAGGAAATCATACTTCATAAAGTTGGATTT
AATTTCAGAATTGTGGATGCTCTAAATTTCCCATATGCAATGTTTCCCTCATACACGAGCATGCTACCCACAATTATCAG
TACATCAGTGAAC---------AACATGATGCTTTGAAACAGGTATAACTCTCATGGTACTCATTTCATACAAAACCGAA
CCACCAAAGTATTAAAAAAATCACTAGAAGAATTGCAAGAGAAACCCAATTGTAAGTCTTTTCTTGAAAACTTGCAGAGG
AGGGTAGCTCTCAGTTTAGTCTATACAATGCATTGCCTCCATGAATATGGAATCTGAAAGTAGAGAAAGCTGATTTTTAC
AGTAAACATAACCATCACACATTCTTATATTTGTATCTCATTGCGCAACCAATGTAAACCAGCAAATTTACAAAGCTGAT
CCCTGCCATCAACCAAAAGAACCGGTCAAGATGGCCTTCATTCAAGTTATCTGGGATCCATCCTGCATCTCCTCCTTGAG
TTGTAAGGTATGACACCAAGGTCAATATGATTGAGCTTAAATAGCTTCCTACCGTGACCGTAACAAGTGCCAATGCAGCA
CATAAGCTCCTCATGGCATCTGGGGCCTGACCGTAGAAGAACTCGACTTGACCTATAG----------------------
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>chr4A_147
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-------------------------------------------------------------------------TGTTGAA
TTATTGGGGATAATGTGTTGCACACCATTCATGTGTTCTGCTGGAATGATGCAAAGCAAGGCATCAAGTTC-AGCTTGCC
TACTGTACAGAAGAATGCTAG--------------------------------------------------------TGT
TATTAATTTTACTGGTTTCATAGGAATACCATAAGTGAAAAATCATACTAATATTCGAATCTGTACCAAAAACCGTTGAA
AGTCAGACGTCGCACATTTTCAAACCGAGGGAGTATCTTATTTGTAGGACCCTGATAAGTGCAACACGTGTGGCATGAAG
AAATTTTGACCTGACGTTTTTTTATGACAAGTTTAGTTACCTGAGGATGACAACTTTAGTTGTGAAGCACGGCAACTTTT
GGTTTTGA-ATGGCAAGTTTTAGTT----------TTTTTGGTTTTTTATGACAATTTTAATTCTAAAAACGTCACTCGT
GCCACACTTGTGATCCTTATCATTTGGGTA--------------------------------------------------
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-----------------------TATTTGAAACAAGTTTTGGATAGTTCGTAGGGCGCTGTGCCACACTTGTGACTCTTA
TCATTTATCATTTGGGTATATTTGAAACAAGTTTTGGAAAGTTGGTAGGGCGCTGCGATCCTCACTGCCGTCCTCTACGG
AGAGCTAGACGCAACTGCAGTGCAGTCTCGCTGCCGCCG-------CCATGCATGCCGACGCCATTGCCACTACTCATCC
ATGAGGACCAAGCCCCCGACCTTCTCGGTCACCACCGCGTCGCAGCTCCACGACGCCATCGACCGCCTCCTCCCGCTGCT
CCGCGCCGACGCCGCCCACGCCCCGGCCGCGCGCGCGCTCGCCGCGGCCGCCGCCTCGCTCCCGCCCTCCACGCTGCTCT
CCAACCGCCTCCTCCACCTCCTCTCCTCCAACGCCGCCTCCCTCCCCGACGCCCTCGCCCTCCTCTCCTCCGCCCCGAGC
CCCGACCGCTGCTCCTACAACACCCTCGTCGCCGCGCTCTGCCGCTCGCCGCGCCACCTCGCCTCCGCGCGCGCGCTGTT
CGACCGAATGCCCCACAGGGACCACTTCTCCTGGTCCGCCATCGTCTCCGCCTACTCCCGCCACGGCCGGCCCCTCGACG
CGCTCGCGCTCTACCGCCGGATGCAGGGGGAGCCCGGGAGCGCCGACGCCGACAACCAGTTCACCGCGTCCAGCGCGCTC
GCTGCCGCCACCGCCGCCCGGTGCGCCCGCGCGGGCAGGGAGCTGCACTGCCACGTGGCCAGGAGAGGGATCGGCGCGGG
CGATGCCGTCATGTGGAGCGCGCTGGTGGACATGTACGCCAAGTGCGGCCGGTTGGACGATGCCAGGAGGGTGTTCGATG
GGATGCTGGTCCGGGACGTCGTCTCCTGGACGGCGATGGTGGAGAGGTACTTTGACGCCGGGCGCGCCGGGGAAGGATTC
AGGCTGTTCCTCCAGATGCTGAGAGCCAGAGGTGTTCGACCGAATGAGTTCACGTACGCGGGGGTTCTGCGTGCTTGCGC
AGAGCTCGCCGTCGAGAGCCTCGGGAGGCAGGTGCATGGCCGAATGTCAAAGAGCAGCGTCGGCGACTCGTGCTTTGCAG
AGAGCGCGCTCCTGCACATGTACTCCAAGTGCGGGGACATGGCCAGTGTGGTGCTTGTATTCGAGGGGATGCCAAAGGCA
GACCTGGTGTCGTGGACGGCAATGATCTCTGGCTATGCGCAGAATGGTCAGCCAGAGGAGGCGTTTCGCTACTTCGACAT
GTTCTTGAGGTCAGGAATTAGGCCTGATCATGTCACGTTCGTTGGTGTTCTCTCTGCTTGTGCTCATGCTGGTCTGGTCG
ACAAAGGTCTGGAGGTCTTCCATTTGATAAAGGATACGTATGGCATTGCACACACCGCTGATCATTATGCTTGCGTGATC
GATCTACTCAGCCGATCAGGTCAGTTTGAACGGGCAGAGGAGATGATCAACAAGATGGCTGTCAAGCCTAACAAGTTCCT
GTGGGCATCCTTGCTTGGTGGCTGCAGGATTCACAAGAATGTCCGCTTAGCTAGGCGGGCAGCGGAAGCATTGTTCGAAA
TAGAACCTGAAAATCCTGCGACCTATGTTACTCTAGCTAATACTTATGCATCGGTCGGTCTGTTTGATGAAGTTGAGGGT
GTAAGAAAGATCATGGATGCAAAGGGCATAACGAAAATGCCGGCGTCAAGTTGGATTGAAGTTGGAAGAAGGGTGCACGT
ATTTCTGGTCGGTGATAAGTCACATCCTCGAACTGAAGAAATCTATGCCCTTCTGAAAAAGCTTTATGGGAAAATGAGGG
AAGAAGGGTATGTAGCGGACACCGGATTTGTTCTCCATGATGTTCAAGATGAGCGGAAGGAGCATGACATTGGCTACCAC
AGCGAACGACTTGCTGTTGCATTTGGGATCATTGCCACTCCTGAGGGTTCCCCTATCAAGGTTTTCAAGAATCTGCGGAT
ATGTGGGGACTGTCACACTGCTATTAAGCTCATATCGCAGATTGCTCAGAGAGAGATCATCGTAAGGGACTCGAATATAT
TTCATCACTTCAAGAACGGGGTTTGTTCTTGCAGAGACTATTGGTAATCTATGCTGCATATGTGGGTAGGTTTGACTTCT
GATATATGGGCAACTATTATCCATTTTTTCATGGCTAAAGTTGATGTGCATCATCTATTGATTTAGCAGCTGGTGTCACA
TGAGGTTATTTTTTCGAGAAAACCCAAATGGCCTTTACGTTTCATTGCATTGGAAAGAGAGGGAATTTACATCCTCCTAG
GAGGCAGGTTTACCTCCTAGGCTCATGAGACTTCTGGTGTCACATGAGGTTATTGCAAT-CCAGGCTCCAAGAC----TC
CTTATGAAGCTGCTATTAGGAAAATGGCCTCCAAAGTTTGTAGCTCCGATACCTTGGACAATTTTTCTGCTCTGTTCAAA
GGCTAAGTTATATACGTACATGTTT-GCTTTCTTGTATTATAACATATCTTGTAAAGATGAGCATTTTGTACAACTGGTT
TGCTAGAAATGATCAACCAACAATAACCCTGTCTTTGTTTGGCAAATCAGAAGGAAATTATACTTCATAAAGTTGGGTTT
AATTTCAGAATTGTGGATGCTCTAAATTTCCGATATGCAAAGTTTCCCTCTTACACGAGCACGCTACCCACAATTATCAG
TACATCAGTGAAT---------AACGTGATGCTTTGAAA--GGTATAACTCTCATGGTACTCATTTCATACAAAACCGAA
CCACCGAAGTA-TAAAAAAATCACTAGAAGAATTGCAAGAGAAACCCAATTGTAAGTCTTTTCTTGAAAACTTGCTGAGG
AGGGTAGCTCTCAGTTTAGTCTATACAATGCATTGCCTCCATGAATATGGAATCTGAAAGTGCAGAAAGCTGATTTTTAC
AGTAACTATAACCATCACGAATTCTTATATTTGTATCTCATTGCGCAACCAATGTAAACCAGCAAATTTACAAAGCTGAT
CCCTGCCATCAACCAAAAGAACCGGTCAAGATGGCCTTCGTTCAAATTATCCGGGATCCATCCTGCATCTCCTCCTTGAG
TTGTAAGGTATGACACCAAGGTCAATATGATTGAGCTTAAATAGCTTCCCACCGTGACCGTAACAAGTGCTAATGCAGCA
CATAAGCTCCTCATGGCATCTGGGGCCTGACTGTAGAAGAACTCGACTTGACCTATAGCGGTGAAAACCTCGGCAGCACC
AGCAAAGCAATACTGTGGTATTTGCCAAAGAATGCTCATTGGAACAGCAACATTCTCATGGATGAGACCCTCAGTCCTGG
CAATCTCTAAGCGCTTCAACTCAACAAGAGCTGCAGATACCATTGTCGCAATGGACAGGGCTAATCCAATGCCCATTCGC
TGTAGCTCAGAGAAACCCTTTTCCCTTCCAGTGAACTTTCTAGCTATGGGTATGAGGACGCGGTCATAAATTGCAATCCA
GATCATGACACTGATTCCGTTGAAAGTAAATAGGGATGCCGGAGGAATATCGAAAGATCCAACCCGTTTGTCAAGAACCA
TTCCCTGCTCCACGAATACGGAGCTCTGAGCAAATACCGCGCTGAATATGATAGTAGTAGCCCAAACCGGGAACATTCTT
ACAAGGATCTTCAGTTCTTCCACTTGGGTGACAGTGCATAGCCTCCATGGGTTTGCAGAAAAGTCACTCTTGGCATCAGT
AGATGAGATGATGGCAGCCTTGTCAAGGAATCTGTACAAAAGGGAAATCGATGGAATTTTTTAACAGTCATACAGCAAAG
TAGTTTTGCACTAACACGAAATCTACCTACAAAAGTAATACACCGGGAGAAAGACAAGTATCACATTGAAAAGCAATAGT
CCATCCTTATCCTGAAGTTATATCAGATTGAGCCCTACCACACCAGTAGCACTCATTATACTCCTATTGTATTATGTACC
CAGTACCCACCATGAACTAAGGCCATACATTTTGGCATGGACGCCCCCTATCCATATTCCTTCTGTTGCATTTAGGTATT
CATTTTCTGCAAACCTCAAATTGAAACCTTACTAAAGGTTGTGTCATACTTCAGTGTCTACATTGGTAGTGTAAGTAACC
TGTGTTGTTTCATAAATACATCGACAGATGACACTAAAAGTAAAGCAAAGATGCAGGATAAGGATCATTACTCAAGTTCA
CTTGTGTGCTCCAGCTTCCGGCTTCCCTCTATTGCTGAATTTTGACTATCAACCTCATACAGAAGAGATGCATCGAGTGG
CAACTCGATATGCCACTTACGGAATGCTGCGACAACAACCTGGCACACTCTTGTAATTGGACTCCCACCGGGTTTCTGAA
ATCTGTACATATTTGAGGCTGAAAAGAAGCTTGCAATAGCCAATGCCATAAATACAGTAGGAATGGCAAATCCTATTCCC
CAACCTGAGTTATCTTGTATCCAAACAATAACAGTGCCTGATAAGAGTGCACCGACATTTATGCAGAAATAGAACCAGTT
GAAGAAGGAACCCTGCTTTACTCTCTCTGTCGGATCACTGTCATCAAATTGATCCGCTCCAAAGGATGACACACAAGGTT
TAATGCCTCCAGTTCCTAGGGCAATCATATAGAGACCCAGGAAAAATGTGCCATTCTGAAGTAGGCTTGGTTCTGGACAG
ACAGATCCTAAACATGAAGGTGGTTGAAGTGCTGGAAATGATGCTGAAATCGTTAAACCAGCCAGACCCTTCAGCAAAAA
GGGCGACACATGATTAAAATGGATGATTGAAGATATTGAGATGGACGGATAGATGGATCATTAGAATAAACCTGAATATA
ACAAAACCCACATGCTCATTATAGTTGTTCAAAAGTAAAAGATATTTTGATTCAAGTACATGGATTCATATACCAGGATG
GAGCATTATGGAACAAAGGAAGAAGAGAAAAGTTTGGGTTGCTTTATCTTATACTTACAATGAAATAAATCGATGAGAAA
ACAGCAATAGTCCAGTACTTTCCCCAATAAGAATCTGCTAGGATGGCTCCAACGAGGGTAGTCAGATAGCATGTCCCTTG
CCAAGTGATAACATTTCTTGCAGCTTCAAGATTGCCTTGATGAAGCTTTATTTTCAGATAAGTAACTAGGTTTGTTGCAA
TTCCATAGTAGGCCAGACGCTCACAACACTCAGTTCCTGTCACCAGACTAGCATCATTGGAAATTGCCAAACATCATGCA
CAAAAGCCTCAAAAATGTTTTATGCCATATGATCAATAGTTTTTAGGCTAGTTAAAATTGTCTGGTACCATTTAGCTCTA
AATAAAGGCTTCTTGAAGCTGCAAGATATAAACTGGCATACTATTATTACTAACAAGCAGTACCCAATAGGTCAAATGTT
TAACCATTCATTAAAAATGGATTGAGGGATGTGCTAACTAAGCAAAATAGCTCACCACTACAGTAATGATCTGCTATGAG
ACTGCAAGGAGCTCTTGAGCAAAATTTGGCGCGATATGGCACTCAATTTGGCACAGAGAAGCATAATTTGGCACTCAATT
TGATTTTTTTCTGCAAAACTTTTTGCAAGAATGCAGCTATGGCCAGCCAGTGCCAGCCGAATTGGATGAACCAGCACAAA
CCGTGTACAGAGGCTCCTATATTGTGTCACCCAATTACGTACCTAGGATGAAGAAGCAGGCTCGCCAGTTGCCCGTGGCG
CGCCTCGTCGCAGGACGGCCTTTGATGTCGACGGATCCATCCCCTGTGTAAACACTAGCATCCTGCTAATCAAGAAATGG
CAGCACTCAGACCAGACCACCCAAGGACATACCGGGTTGCATCCCATAATTTCTCCAACATGTACAGATAGTAGTATCAC
TGCTGGGCAGTGCCGCGCGTCAGCCTGTCTCCGGTTTCAGTTTGAACCCAGGAGGGTGGAGGATTTGTCAACTTGCTCTC
CTCTCATTCCAGAGAAAAGAAGAGGGTGGGTGACCAGCAGGATAGAACTGGCTAGGATGAAGCTGTGGTCTTCCTGTGGC
TCTGCGTAACGAAAATTCAGAGAAGAAGAGGAAAAAAGCAGTGGATTTTATACTACCTGGGAAGGAAGGAGGAGCGGCTC
GTGATCCCCGTCCCCTTGGACCAGCAGTCTCCTCTCCTCTGCCGCGTCCATGGAGACGGCGGGTCGCCGTCGCGGAGATC
GAATCGGCAGGAGCAAATCAGGAAACTGGGTAGAGGGAGGGCAGTATTGTATTTGCCTATTTGGGCTGGGTTTGACCTCC
GAGTCCTGCCTGACTCCTCGAGTGCTTGAGGTTAGAGCTACTACTTTTTTTCTTCTGTGAGAGAGCTTAGAGCTACTAGT
AGTTTTTGTTTAGATATTTTTTAGTTTTTTTAGACTATTTTTTAGAATCATTTAGTTTTTTTAATTTTTTGAGACATATT
TTGTTTTTTAGTTTTTTTAGACTTTTTTTTAGTGAGGTGCCTGGCCTGGCCCTGAACCTGGTACGTTGGTGTTTGTCATG
AACCAAGCCAGTAGCTCACCCGAAAAGATTGCCCTTGCATAAAAAGATAACCCAGAGAGATTGTCCTTCTCGTGCTGTTA
TTAGGGAAATGCCCTCCAAATTTGTACTAGCTGCTATTATTACCTTTGCACAATGTATCTGCTCTTTTGAAAGATTAAAT
TGTGTGCACGTGTCTTTTCTAGTATTACCATATTACAGAGAGTTTGCAAGAAATGGTAAAGCAACAGCAATAGAGAATTT
ATACTGTACTAGTATATCTTTGATTTTGGTTCTAGAGCTTCTCGATTTCTCAGTTGCAGTGTTAGCACTTACATGCATGT
GCAACGCATAAATTTCAGAAAACAAATCTTTACGGGTCGCTTTAAGGAATAACAGGATGCTTTTGAACAGGAAAGTATTA
AATGTGCATGTACAAAATTGTCTTTGTATAACTCTGGTGTTACAAACTTCATACAAAACACACTCACCAAAGTAATAATT
TGTCTAAAATATACATCACTAGAAGAATTGAAGTCCTTTTCTTGAGGACTTTCTGAGAAGGGCAGCTCATGTGATGTCTT
GGTCTATACAATGAACTGCTCCCATGAATATGGAATCTGAAATCACAAGAACTTATTCCACAGTAGGTATGCCCATCACA
CATTTTTTTGGAGAAACCATCACACATTCTTATATTTGTATTTCATCGCACAACTGATGTAAACCAGCAAATTCACAAAG
CTGATCCCTGCAATCAACCAGAAGAACCGGTCAAGATGGCCTTCATTCAGGTTATCCGGGATCCATCCAGGATCTCCACC
TCGAGTTGTAACATACGACACCATGGTCAGTATGAACGAGCTTAAATAGCTCCCCGCTGAGACCGTGACGAGCGCAAATG
CAGCACATAAACTCCTCATGGCATCTGGGGCCTGATCATAGAAGAACTCAAGCTGACCTATA
>SNPs
-------S---------------------------------S--------------------------------------
------------SSS---S--S-----------------S-------------S--------------------------
---------------------------S----S-----------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S------------------S-----S-------------------------
-------S--S-S------------S--S---SSS---------------------------------------------
-------------------S-S-S---S---------SS--------S-S------------------------------
S-----S-SSSSSSS-------------------S-----------------S----------S-----------S-SSS
-SSSS---SS-SSS-S-S---S-S--------------------------------------------------------
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--------------------------------------------------------------------------S-----
-------------------------------------------------------------------------SS-----
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----------S---------------------------------------------------S---------------S-
-----------------------------S--S-S-----S---------------S-----S-----------------
---------------------------S------------------S---------------------------------
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----------------------------------S----S--------------------------S-------------
-----S-----S----------------------------------------------------------------S---
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S---------------------------------------------------------S---------------------
-----------------------------------------------------------------------------S--
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----S------------------------------------------------------------------S--------
-----------------S-----------------------------------------------S--------------
------------------S-------------------------------------------------------------
---------------------------S---------------------S-----------------------S------
-----S--------------------------------------------------------------------------
---------------------------------S--------S-S-----------------------------------
--------------------------------------------------------------------------------
------------------------S----------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S--S-----------S--------------------------
------------------------------------S-------------------------------------------
--------------S--S--------------------------------------------------------S-----
-------S----------------S-----------------S-------------------S-----------------
---S----------------------------------------------------------------------------
------------------------------------------------------------------------------S-
----------------------------------------------------------------S---------------
-------------S-----------S-----------------SS-----------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------S-S---------------------------
-------------SSSSSSSSS----------------------------------------------------------
--------------------------------------------------------------------------------
---------S-------S--------------------------------------S-----------S-----------
--------S-----------------------------------------------------------------------
---------------------------------------------------------------------S----------
---------------------------------------------------S----------------------------
--------------------------------S-----------S-----------------------------------
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>forward_658
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------------------------------------------------------------------------------CG
GTGGTGTTACTTCATGCC--------------------------------------------------------------
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>reverse_2259
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------------------CAGGCCTGATCATGTCACGT------------------------------------------
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>forward_2085
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-----------------------------------------------------------------ACTCGTGCTTTGCAG
AGAGT---------------------------------------------------------------------------
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>reverse_3183
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--------------------------------------------------------------CTAGCAGCTGGTGTCACA
TGA-----------------------------------------------------------------------------
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