>input_sequence_48314
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--------ATGGAGAGGAAGGAGGGCGGGGAGAAGATGGAGGAGGTGGAGGTGGGCGACGGCGGGAAGAAGCCGGAGGAG
GGGACCAAGC------CGGCGCCGGTGTGCTTCAAGAAGCCGGCGGGCGAGGACACCGGCATCCTGGAGACCACCAAGGA
CTACTTCAAGCAGCTCGGGAACACCAGCGCCGACACGCACTGGGACTGCATCAAGAACAGGGTCCGCGCCGCCGGCGAGT
ACATCTCCAACAAGACCAGCTCGGTCACGCCTCCTCCTTCCCCTCCCCCTGCCCTCCCCTCCTCCTAACGCACGCGCTCC
TGCTCTGCCTTGTTCTACTTCTATGCACGTCTGCTTGCTGCTGTTCGATCTTGGCCCGTACCTGTCCCGTGCCTCTGCTC
GCTAGATCGTGCGTCTCGTGCCGGTAGGAACACGATAGGAATCTTAGCCCTCTTGCGGATTTCGTCACATGTGTAGTTCC
TAGCCGTTTAATTTCGGAATAATTCGTCGCGTGCTGTTACGAAATGTTGCTACTCTTCGTTTCCCCCTTTGTTCCTCGGA
TCGGAATGCATGTTCTTGTAGCAATCGCTCTGTTTTATTTTCCTGGCAACCACGTTAAATCGCAAGGGAGTTAGTGTAGA
TGTTGCAGCGATTTTCGCGAGATCTTTTTTGC--CTTTTTTCCTGCACGGAGAAGCATCTGGATGATTTTTTTAGATGGG
TAGGTGTGCTTCCGCTCGCCTGATTTTGAGGCTGTGCGGTGAAAACAACCGTGTGATGC------TAGTGCAGTGTGGAT
GAAGTAGCGATCCGCAGATCCTTCCGCACTTATTTTTTCCCCTCGAGCATCT--GGATTTTTTTTTCTAAGATTGTTATG
CTTACCGGCAATTCCTTGTCCGATA----TATATAGGTGGCGATTGACCTGTGCAGGCATCCGGATTTCTTGATTCTTGC
TATCAAAGTTGGGGTGACCTTGCTAGTCGCTGCCTCTGTAAGCATTAGTCAGTCTCTGTCCATGTAGATTTAT-------
----------------TTCTGCTGGAGATTGTCTTTTGCAAGAGTTCGTCCTGTGTTCAGAAACTTATTCTTGGAATCCA
--GCATTTTTTGCCGTCAAATGCTTTGTGATCTCTTGAGAAAGCTTGCCGTACTACCTGTTACAGTGACCCACATTTCTT
GCTCTGATGC--TGTGTTGTAGTAGAAATCTTGTTCTAAATGATAAGGATCCGTTCCGACTTCAGTCATGCGTTGTTTGA
TTCTGTTCTTACAG------------------------------------------------------------------
--------------------------------------CTGATGCCATCTATTGTAGTTTCTTGCTATACTTCTGTATTT
GCTCTGTTAACTCAGAATTCAGATAG------------------------AATTTCCCAATTCCGA-AGCCTGTCTGCTG
CTATG-TT-CTGATGAATCTGAATAGA---AGTATTATGATGGAATCTGAATTCTGACAGCGAATCTGCTACTGTTCTCT
GATGCGTCTGGTTGAATCTGATGGCTAACCCGTGGCTGCTTCGTGATGAGTTGCAGGTGTTTGGCAGGCAGAAGGTGGAG
CCTGAGGCCAAGGAGGAGACCCGGGGGGCGAAGCCAGAAGCAGCACCGGCGGCAGCTGAGTCTCAGTGA-----------
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--------------------------------------
>chr4A_1_TraesCS4A01G258600
TAATCTTTATTATTTCTACTATTATTCTCTGTATTGCCATGACATATGATGAATCATTTGAAAGTTTTCTTTTTTCGTGC
CATCACGTTTCCGGTGAGGGAGATAG-----ATAGAGATGCCCATCACGTTTGCGGATTCAAAATTCAAAAAACGCGATC
GCAACGTTGAGTTCCACGAATCCGGAGCGCCAACCAGAGCATCTTCCACCCAAAAAGATTGCA---CTGCTCCTCAAAAC
CGAGTCGCCGGAAGCTTCCGTTCGATCCGAGCGCTCGGCGCGAGATCGGACGCTCCAAACCGCGCCGCGCACGGCAGGGC
CAGGCCACTACCGGCGGTACGTACAACCCTGCGCTGCGCTGCCACCCTGTTCGCAGCTGCAGCCTTTAGCTGGCCCACAC
ATCTTGACCCCTAGGACC-CGGTCACGCGATCA-------------------------------------CATCTT----
-------CACCTGCTACTACTTCGCT--------------------------------GGGCCCGCCTGTCATCGACGCG
GTAGCAGCCTTCCCTCGCGTGAACCCCGTCGCAAACTCCGCTCGTCGATCACGCGCGCTGCGCCTGCCCGCCCGGGCCCA
CGCGCAACCGCCTCTGCAAAAGCCAGCACACACGCAAGCGT-CCGGGCCCACGCGTCAGCGAGGCCTTTCCGAGATTCCC
TCGCCCAAGGAAATGAGACGC----------------------AAGAAGCAACGGGAAAAACCCTGACAAAACCCCGAAG
GCGCCGGCGCTGGCCCACCGGTCAGCCTAACGCGCGACGGCGCGAGGGC-GCGCGCCCGTCGAAACGGGAAGCCGCGGGC
CCCACGCATCAGTGGGAGGCGGAGGGGAACGGGCCCGCGTGTCAGAGAAGCTGCGCCGTGCCGTCCGTCCGCGGCTTTCT
TTCGTGGATGCCAAGCCAGCGCCCG-----GCTATAAAGCGAGCCCCGCGCCACCATTGCCCAGAGCACCACAAGCTTTC
TCCTCCCTCGGCTGGTTGGGTTGGTTGGTTGTAGCGTAGCCTCTGTCCTCTCTCCTCTC----------GGGGGTTCGGT
CGTCGGTGATGGAGAGGAAGGAGGGCGGGGAGAAGATGGAGGAGGTGGAGGTGGGCGACGGCGGGAAGAAGCCGGAGGAG
GGGACCAAGC------CGGCGCCGGTGTGCTTCAAGAAGCCGGCGGGCGAGGACACCGGCATCCTGGAGACCACCAAGGA
CTACTTCAAGCAGCTCGGGAACACCAGCGCCGACACGCACTGGGACTGCATCAAGAACAGGGTCCGCGCCGCCGGCGAGT
ACATCTCCAACAAGACCAGCTCGGTCACGCCTCCTCCTTCCCCTCCCCCTGCCCTCCCCTCCTCCTAACGCACGCGCTCC
TGCTCTGCCTTGTTCTACTTCTATGCACGTCTGCTTGCTGCTGTTCGATCTTGGCCCGTACCTGTCCCGTGCCTCTGCTC
GCTAGATCGTGCGTCTCGTGCCGGTAGGAACACGATAGGAATCTTAGCCCTCTTGCGGATTTCGTCACATGTGTAGTTCC
TAGCCGTTTAATTTCGGAATAATTCGTCGCGTGCTGTTACGAAATGTTGCTACTCTTCGTTTCCCCCTTTGTTCCTCGGA
TCGGAATGCATGTTCTTGTAGCAATCGCTCTGTTTTATTTTCCTGGCAACCACGTTAAATCGCAAGGGAGTTAGTGTAGA
TGTTGCAGCGATTTTCGCGAGATCTTTTTTGC--CTTTTTTCCTGCACGGAGAAGCATCTGGATGATTTTTTTAGATGGG
TAGGTGTGCTTCCGCTCGCCTGATTTTGAGGCTGTGCGGTGAAAACAACCGTGTGATGC------TAGTGCAGTGTGGAT
GAAGTAGCGATCCGCAGATCCTTCCGCACTTATTTTTTCCCCTCGAGCATCT--GGATTTTTTTTTCTAAGATTGTTATG
CTTACCGGCAATTCCTTGTCCGATA----TATATAGGTGGCGATTGACCTGTGCAGGCATCCGGATTTCTTGATTCTTGC
TATCAAAGTTGGGGTGACCTTGCTAGTCGCTGCCTCTGTAAGCATTAGTCAGTCTCTGTCCATGTAGATTTAT-------
----------------TTCTGCTGGAGATTGTCTTTTGCAAGAGTTCGTCCTGTGTTCAGAAACTTATTCTTGGAATCCA
--GCATTTTTTGCCGTCAAATGCTTTGTGATCTCTTGAGAAAGCTTGCCGTACTACCTGTTACAGTGACCCACATTTCTT
GCTCTGATGC--TGTGTTGTAGTAGAAATCTTGTTCTAAATGATAAGGATCCGTTCCGACTTCAGTCATGCGTTGTTTGA
TTCTGTTCTTACAG------------------------------------------------------------------
--------------------------------------CTGATGCCATCTATTGTAGTTTCTTGCTATACTTCTGTATTT
GCTCTGTTAACTCAGAATTCAGATAG------------------------AATTTCCCAATTCCGA-AGCCTGTCTGCTG
CTATG-TT-CTGATGAATCTGAATAGA---AGTATTATGATGGAATCTGAATTCTGACAGCGAATCTGCTACTGTTCTCT
GATGCGTCTGGTTGAATCTGATGGCTAACCCGTGGCTGCTTCGTGATGAGTTGCAGGTGTTTGGCAGGCAGAAGGTGGAG
CCTGAGGCCAAGGAGGAGACCCGGGGGGCGAAGCCAGAAGCAGCACCGGCGGCAGCTGAGTCTCAGTGAAGGC--GTCCT
GAGCTCGTGATCGTCTTCCATGAACCAACCTGAAGCTTCATTCACTGA--GAGTTGCGAGGTCTTATCAGCCTAAGAGTT
TTTCTTTTTCTCTTTGTCCTTCTGTTCGCCTAGTTGGGACATGGTTTGCCTGAGCGATTCCGCATTGTAA--GACCCGTT
CCTAGCTGTGGATCTTAGTCCGGTTGGTGCCGCCGTCATTTGCGGTGCGTTTTGGTGACATTTGTTTGTCCTATCACCTA
TGCTTCATTTTGTCGTATGGAATGGAAGATCATATGA-------------------------------------------
-----TCATGCAGCCTACTTCCTGTCGAGTTTAGTTGCTTCAGTGTATCC--------TTTCAGCACTAAACTGGCTGAG
TGTTCCGTTCTGAATGGAGCCTTGGGCTTTGGACTGACAATGCAAAGATTTAATGTAT-------------------TGA
TTTGGTAGCCATTCATCACATTCTCCTGCTATGTTTGAAATTAACCTCAACTATTAAGCGTGGGGGATAAAGAAGCACCT
CGGGCCAAGAAGCAAGTCTAGAATATATCTGAAAAAGTTTGAAAATGACATAG--------CCGTTGTCTCATTTTGGCA
AATACTTTGGTGGGCAGCAGTGGCGTTTTAGGCAACTGTAGTGATTTTTTTTTTGGTGGAACAAAGAAACACAAACGTAC
AATAGCAAATCTGTGAAATGTCTATGATAGGGTAGAATAGTCTTTTTCAACATGGTTAAAAGTTCGTATTCTATGATGGT
CCGTCAAGAAAAAGATTTGTAATGTACGTCCTTCAAAAAGGAGCCGCAACGCGTGGGGCATGTGTTTGGACTCGACCATG
GTAATTTAACCATTCAGTATGTAAATGCCCGTATGCCCCATCAAACACCTAGGCATGAGAAGATTCAGGCTATTGTCCAT
ACACGCTCGGCCCAATGGTAGCTACTCTCTTCTTTCCTAAATATATGACGTTTTGGTAGTTCATGTCATACATTTAGGAA
CGTAGGGAGTACATTGGTGTTGCCTCACATGCATCATT
>chr4D_77
----------------------------------------------------------------------------GTGC
CACCACGTTTCCCGTGAGGGAGATAGTTTAGATAGAGATGCCCGTCATGTATGCCGATTCAAAATTCAAAAACG--GATC
GCGACGTTGAGTTCGCCGAATCCGGAGCGCAAACGAGAGCATCTTGTACCCAAAAAGATTGCA---GCACTCCTCAAAAC
CGAGTCGCCAGAAGCTTCCGTTGGATCCGAGCGCTTGGCGCAAGATCGGACGCTCCAAACCGCGCCGCGCACGACAGGGC
AGGCGGTACGTA--------GTACAACCCTGCGCTGCGCTGCCACCCTGTTTGCAGCTGCAGCCTTTAGCTGGCCCACAC
ATCTTGACCCCTACGACCCCGGTCACACGATCACATGTCCACCTGCTACTACTTACTCCGCTGGGCTCGCCATGTCCCTT
CCATCTCCACCTGCTACTACTTCGCT--------------------------------GGGCCCGCCTGTCATCGTCTCC
GTAGCAGCCTTCCCTCGCGTGAACCCGGTCGCAAACTCCGCTCGTCGATCACGAGCGCTGCGCCTGCCCGCCCGGGCCCG
CGCGCAACCGCCTCTGCAAAAGCCAGCACAGACGCAAGCATCCCGGGCCCACGGGTCAGTGAGACCCTTCCGAGATTCCC
TCGCCCAAGGAAACGAGACGCTCGTCTTCTCC--------CGCAAGAAGCAAC-GGAAAAACCCTGACAAAACCCCGAAG
GCGCCGGCGCTGGCCCACCGGTCAGCGTAACGCGCGACGGCACGAGGGGGGCGCGCCCGTCGAAACGGGAAACCGTGGGC
CCAGCACGTCAGCGAGAGGCCAAGGGGAACGGGCCCGCATGTCAGAGAAGCTGCGCCGTGCCGTCCCTCCGCGGCTTTCT
TTCGTGGATGCCAAGCCAGCGCCCG-----GCTATAAAGCGAGCCCAGCGCCACCATTGCCCAGAGCACCAGAAGCTTTC
TCCTCTCTCCTCTCGGGGTTTCGATCC-------------------AGTAGGTAGGCGAGGCGA------GGGGTTCGGT
CGTCGGTGATGGAGAGGAAGGAGAGCGGGGAGAAGATGGAGAAGGTGGAGGTGGGCGACGGCGGGAAGAAGCCGGAGGAG
GGGACCAAGCCGGCGACGGCGCCGGTGTGCTTCAAGAAGCCGGCGGGCGAGGACACCGGCATCCTGGAGACCACCAAGGA
CTACTTCAAGCAGCTCAAGGACACCAGCGCCGACACGCACTGGGACTGCATCAAGAACCGGGTCCGCGCCGCCGGCGAGT
ACATCTCCAACAAGACCAGCTCGGTAACGCCTCCTCCTTCCCCTCCCCCTCCTCCCCGTTCCG--TAACGCACGCGCTCC
TGCTTTGCCTTGTTCTACTTCTATGCATGTATGTTTGCTGCTGTTCGATCTTGGCCCGTACGTGTCCTGTGCCTCTGCTC
GCTAGATCGTGCGTCTTGTGCTGGTAGAAACACGATGAGGATCTTAGCCCTCTTGCGGATTTCGCCACATGCGTAGTTCC
TAGCCGTTTAATTTCGGAATAATTCGTCGCGTGCTGTTACGAAATGTTGCCACTTTTCGTTTCCCCCTTTGTTCCTCGGA
TCGGAATGCATGTTCTTGTAGCAATCGTTCTGTTTTATTTTCCTGGCAACCACGTTAAATCGGAAGGGAGTTAGCGTAGA
TGTAGCAGCGATTTCCGCGAGATCCTTTTTGCACTTTTTGTCCTGCACGGAGAAGCATCTGGATGATTTTCTTAGATAA-
TAGGTGTGCTTCCGCTCGTCTGATTTTGAGGCTGTGCGGTGAAAACAACCATGTGATGC------TAGTGCAGTGTGGAT
GAAGTAGCGATTCGTAGATCCTTCGACACTTATTTTTTCCCTCACGCATTTGGAGGTTTTTTTCTTCTAAGATTGTTATG
CTTACGGACAATTCATTGTGCGATAT----ATATAGGTGGCGATTAACCTGTACAAGGATCCGGATTTCTTGATTCTTGC
TGTCAAAGTTGGGGTGACCTTGCTAGTCGCTGCCTCTGTAAGCATTAGTCAGTCTCTGTCCATGTAGATTTAT-------
----------------TT-----------------TTGCAAGATTCCGTCCTGTGTTCAGAAATT-ATTTTTGGAATCTA
--GCCTTTTTTGCCGTCAAATGC-TTGTGATCTCTTGAGAAAGCTTGCCGTACTACTTGTTACAGTAACCCACATTTCGT
GCTCTGATGCTATATGTTGTACTAGTAATCTTGTTCTAAATGATACTGATCCGTTCAGACTTCAGTCATTCGTTGTTGGA
TTCTGTTCTTATAGCGGCT--GCTGCTGCATATGATTTCTGAATCTTGGCATGTGAGCTTTCGCTGTTCTGCTTGTGGTG
TCACAACACCCCACACATCTAGTTTGCTGTGGTTACTACTGATGCCATCTATTGTAGTTTCAG-----------------
--------AATTCAGAATTCAGATAG------------------------AATTTCCCAATCCCGATAGCCTATCTGCTG
CTATG-TT-CTGATGCATCTGAATAGT---AGTATTATGATGGAATCTGAATTCTGATAGCCACTGTGCTACTGTTCTCT
GATACGTCTGGTTGAAACTGATTGCTAACCCGTGGCTGCTTCGTGATGAGTTGCAGGTGTTTGGCAGGCAGAAGGTGGAG
CCTGAGGCCAAGGAGGAGACCCCGGGGGCGAAGCCAGAAGCAGCACCGGCGTCAGGGGAGTCTCAGTGAAGGC--GTCCT
GAGCTCGTTATCGTCTTCCATGAACCAACCTGAAGCTTCATTCACTGA--GAGTTGCGAGGTCTTATCAGCCTAAGAGTT
TTTCTTTTTCGCTTTGTCCTTGTGTTCGCCTAGTTGGGACATGGTTTGCCTGAGCGATTTCGCATTGTAA--GACCCGTT
CCTAGTTGTGGATCTTAATCCGGTTGGTGCCGCCGTCAATTGCGGTCCGTTTTGGTGACATCTGTTTGTCCTATCACCTA
TGCTTCATTTTGTCGAATGGAATGGAAGATCATATGA-------------------------------------------
-----TCATGCAGCCTACTTCCTGTCGAGTTTAGTTGCTTCAGTGTATCC--------TTTCAGCACTAAACTGGCTGAG
TGTT-----CTGAATGGAGCCTCGGGCTTTGGACTGACAATGCAAAGATTTAATGTAT-------------------TGA
TTTGGTAGCCATTCATCACATTCTCCTGCTATGTTTCAAATTAACCTGAACTATTAAGCGTGGGGGATAAAGAAGCACCT
CGGGCCAAGAAGCAAGTCTAGAATATATCTGAAAAAGTTTGAAAATGACATAG--------CCGTTGTCTCATTTTGGCA
AATACTTTGGTGGGCAGCAGTGGCGTTTTAGGCAACTGTAGTGATTC--TTTTTGGTGGAACAAAGAAACACAAACGTAC
AATAGCAAATATGTGAAATGTCTATGGTAGGGTAGAATAGTCTTTTTCAACATGGTTAACAGTTTGTATTCTATGATGGT
CCGTCGAGAAAAAGATTCGTAATGTATGTCCTTCAAAAAGGAGCCGCAACGCATGGGGCATGTGTTTGGACACGACCTTG
GTAATTTAACCATCCAGTATGTAAATGCCCGTATGCTCCATCAAACACCTAGGCATGAGAAAATTCAGGCTATTGCCCAT
ACACACTCGGCCCAATGGTAGCTACTCTCTTCTTTCCTAAATATATGACGTTTTGGTAGTTCACGTCACACATTTAGGAA
CGTAGGAAGTACATTGGTGTTGCCTCACATGCATCATT
>chr4B_77
----------------------------------------------------------------------------GTGC
CATCACGTTTCCGGTGAGGAAGATAGATGAGATAGAGATGCCCGTCACGTTTGCCGATTCAAATTTCAAAAACGCGA---
------------TCGCCGAATCCGGAGCGCAAACCAGAGCATCTTCTACCCAGAAAGATTGCCGTGCTGCTCCTCAAAAC
CGAGTCGCTAGAAACTTCCGTTCGATCCGAGCGCTCGGCGCAAGATCGGACGCTCCAAACCGCGCCGCGCACGGCAGGGC
AGGCGGTACGTACAACCCTGCG------CTGCGCTGCGCTGCCACCCTGTTCGCAGCTGCAGCCTTTAGCTGGCCCACAC
ATCTTGACCCCTACGACC-GGGTCACGCGATCA-------------------------------------CATCTCCCTC
CCTTCTCCGCCTGCTACTACCCCTGTGTGTTACTCTTACTCCACGAGTTCGTACGCTGGGCCCGCCCTGTCATCGGCTCA
GTAGCAGCCTTC-CTCGCGTGAACCCTGTCGCAAACTCTGCTCGTCGATCACGAGCGCTGCA-CTGCCCGCCCGGGCCCA
CCCGCAACCGCCTCAGCAGGAGCCTGCAAAA--GCCAGCATCCCGGGCCCACGCGTCAGCGAGGCCTTTCCGAGATTCTC
TTGCCCAAGGAAATGAAACGCTCGTCTTCTCGGCTTCTCGCGCAAGAAGCAAC-GGGAAAACCCTGACAAAACCCCGAAG
GCGCCGGCGCTGGCCCACCCGTCAGCCTAACGCGCGACGGCGCGAGGGC-GCGCGGCCGCCGAAACGGGAAACCATGGGC
CCCGCACGTCAGTGAGAGAGGGAGGGCGGCGGGCCCGCCTGTCAGAGAAGCTGCGCCGTGCCGTCCCTCCGCGGCTTTCT
TTCGTGAATGCCAAGCCAGCGTCCGGCTGAGCTATAAAGCGAGCCCAGCGCCACCATTGCCCGGAGCACGAAAAGCTTTC
TCCTCTCTCGGCTGGCTGGGTTGGTTGGTTGGTTGGTTCGTAGTGTAGTAGGTAGGCGAGGCGAGGCGAGGGGGTTCGGC
CGTCGGTGATGGAGAGTAAGGAGAGCGGGGAGAGGATGGAGAAGGTGGAGGTGGGCGACGGCGGGAAGAAGCCGGAGGAG
GGGACCAAGCAGGCGGCGGCGCCGGTGTGCTTCAAGAAGCCGGCGGGCGAGGACACCGGCATCCTGGAGACCACCAAGGA
CTACTTCAAGCAGCTCAAGGACACCAGCGCCGACACGCACTGGGACTGCATCAAGAACCGGTTCCGCGCCGCCGGCGACT
ACATCTCCAACAAGACCAGCTCGGTAACGCCTCCTCCTTCCCCTCCCCCTCCTCCCCGTTCTGT---ACGCACGCGCTCC
TGCTTTGCCTTGTTCTGCTTCCATGTT----TGCTTGCTGCTGTTCGATCTTGGCCCGTACGTGTCCTGTGCCTTTGCTC
GCTAGATCGTGCG-------------------------------------TCTTGCGGATTTCGTCACATGTGTAGTTCC
TAGCCGTTTAATTTCGGAATTATTCGTCGCGTGCTGTTACGAAATGTTGCCACTTCGTTTC-CCCCTTTTGTTCCTCGGA
TCGGAATGCATGTTCTTGTAGGAATCGTCCTGTTTTCTTTTCCTTTTGTTGTTGTTTGT---------------TGTTGT
TGTAGCAGCGATTTTCGCGAGATCTTTTTTGCACCTCTTGTCCTGCACGGAGAAGCATCTGGATAAATGTTTTA----GG
TAGGTGTGCTTCCGCTCGCCTGATTTTGAGGCTGTGTGGTGAAAACAACCATGTGAATGTGATGATAGTGCAGTGTGGAT
GAAGTGGCGATTCGTAGATCCTTGGACACTTACTTTTTCCCTCACGCATTTGGAGATTTCTTTTC-CTAAGATTGTTATG
CTTACGGACAATTCATTGTGCGATATATATATATAGGTGGCGATTAACCTGTACAGGCATCCGGATTTCCTGATTCTTGC
TGTCAAAGTTGGGGTAACCTTGCCAGTTGCTGCCTCTGTAAGCATTAGTCAGTCTCTGTCCATGTAGATTTATTTTCAGT
TTTGCTGGAGATTATCTT-----------------TTGCAACATTTCGTCCTGTGTTCAGAAATTTATTCTTGGAATCCT
CTGCCCTTTTTGCCGTCAAATGC-TTGTGATCTCTTG----AGCTTGCTGTACTACTTGTTACAGTAACCGACATTTCGT
GCTCTGATGCTATGTGTTGTATTAGTAATCTTGTTCTAAATGATAAGGATCCGTTCAGACTTCAGTCATTTGTTGTTGGA
TTCTGTTCTTATAGCGGCTCTGCTGCTGCATATGATTT------------------------------------------
-------------------------GCTCTGGTTACTAATCATGCCACCCATTGTAGTTTCTTGCTGTGCTTCTGTATTT
GTTCTGTTAATTCAGAATTCAGATAGGCTTCAGTTATGGATTCTGTTCTAAATTTCCCAATTCCAATAGCCTATCTGCTG
CTATG-TA-CTGATGCATCTGAATAGTAGTAGTATTATGATGGAATCTGAAATCTGATGGCCAATCTGCTACTGTTCGCT
GATGCGTCTGGTTGAATCCGAGGGCTAACCCGTGGCTGCTTTGTGATGCGTGGCAGGTGTTTGGCAGGCAGAAGGTGGAG
CCTGAGGCCAAGGAGGAGACCCCGGGGGCGAAGCCAGAAGGGGCACCGGCGGCAGCTGAGACTCAGTGAAGGCTTGTCCT
GAGCTCGTGATCGTCTTCCATGAACCAACCTGAAGCTTCATTCACTGA--GAGTTGCGAGGTCTTATCAGCCTGGAG--T
TTTTCTTTTCGCTTTGTCCTTGTGTTCGACTAGTTGGGGCATGGTTTGCCTGAGCGATTTCGCATTGTAAAAGACCCGTT
CTG-GCTGTGGATCTTAATCCGGTTGGCGCCGCCGTCATTTGCGGTGCGTTTTGGTGACATCTGTTTTGCCATCATCTGT
GTTTC---------------------------------------------------------------------------
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>chr4A_2108
--------------------------------------------------------------------------------
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----------------------------------------AAGCTTGATGTACTACTTATTATAGTAACCCACATTTCGT
GCTCTGATGATATGTGTTGTAGTAGTAATCTTGTTCTAAATGATAAGGATCCGTTCAAACATCAGTCATTCTTTGGTGGG
TTCTGTTCTTATAGCGGCT--GCTGCTGCATATGATTTCCGAATCTTGGCATGTGAGCTTTCGCTGTTCTGCTTGTGGTG
TCACAACACCCCACATATCTAGTTTGCTCTGGTTACTACTGATGCCATCTATTGTAGTTTCTTACTGTACTTTTGTATTT
ACTCTGTTAATTCAGAATTCAGATAGGCTTCAGTTGTGGATTCTGTTCTAAACTTCTCAATTCCGATAGCCAATCTGCTG
CTGTT-TTACTGATGCATCTGAGC---------ATTATGATGGG------------------------------------
---------------ATCTGATGGCTAACCCGTGGCTGCTTTGTGATGTGTGGCAGGCGTTTGGCAGGCAGAAGGTGGAG
CCTGAGGTTAAGGAGGAGACCCCGGGGGCGAAGCCAGAAGCAGCAGCGGGGGCAGCCGAGT-------------------
-AGGTCGTGATCGTCTTCCATGAACCTGAAGC--------TTCTTTCACTGAGTTGCGAGGTCTTATCAGCCTAAGAGTG
TTTCTTTTTCGCTTTGTCCTTCTGTTCGCCTAGTTGGGACATGGTTTTCTCAAGCGATTTCGCATTGTAA--GACCCGTT
CTA-GTCATGAATCTTAATCCGGTTGGTGCCGCCGTCATTTGCGGTGCATTTTGGTGACATCTGTTT-------------
--------------------------------------------------------------------------------
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>chr4D_2108
--------------------------------------------------------------------------------
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----------------------------------------AAGCTTGCTGTACTACTTATTACAGTAACCCACATTTCAT
GCTCTGATGCTATGTGTTGTAGTAGTAATCTTGTTCTAAATGATAAGGATCCGTTCAAAAATCAGCCATTCTTTGGTGGG
TTATGTTCTTATAGCGGCT--GCTCCTGCATATGATTTCCGAATCTTGGCATGTGAGCTTTCGCTGTTCTGCTTGTGGTG
TCACAACACCCCACATATCTAGTTTGCTCTGGTTACTACTGCTGCCATCTATTGTAGTTTCTTGCTGTACTTCTGTATTT
GCTCTGTTAATTCAGAATTCAGATAGGCTTCAGTTATGGATTCTGTTCTAAATTTCTCAATTCCGATAGCCAATCTGTTG
ATGTATTT-CTGATGCATCTGAGC---------ATTATGATGGG------------------------------------
---------------ATCTGATGGCTAACCTGTGGCTGCTTTGTGATGCGTGGCAGGCGTTTGGCAGGAAGAAGGTGGAG
CCTGAGGTCAAGGAGGAGACCCCGGGCGCGAAGCCAGAAGCAGCAGCAGGGGCAGCTGAGTG------------------
--GCTCGTGATCGTCTTCCATGAACCTGAAGG--------TTCACTGA--GAGTTCCGAGGTCTTATCAGCCTAAGAGTT
TTTCTTTTTCGCTTTGTCCTTCTGTTCGCCTAGTTGGGACATGGTTTGCCCGAGCGATTTCGCATTGTAA--GACCCGTT
CTA-GTCATGGATCTTAATCCGGTTGGTGCCGCCGTCATTTGCGGTGCGTCTTGGTGACATCTGCTTCGCCATCATCTGT
GTTTAA---TTGTCGAATGGAATGCAAGATCACTTGGTCGTCAAGTTCTCTGCGCAATGCGATCTGGTCTTGTTCTGGTT
CTTCTTGATGCTACCTACTTCCTGTTGATCTTCAGCGTTGATCTTCCGTGTTGCTCTATTTCAGCACTTCAGTGGCTGCG
TGTT-----GTGAAGCCTTGG------------------ACGCAAAGATTTACTGTACACCGTTTTGAGGAAGCAAATGA
TTTGGTAGCCATTCATCACATTCTCCTTCTATGTTTCAAATTGACTTGAGCAGTTAAGCGTGGTGG-TATAGAAGTGCCT
CCGCCCAATAAGCAAGTCCAGAATATATCTGAAAAAGTTTTAAAATGACATGGCGACTGTTCCGTTCTCTCATTTTGGCA
AATACTTTGGCGGGCAGCGGTGTCCTTTTAGGCAACTGTAGTG-------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
-------------------------------------------S----------S-----------------SSSS----
--S-----------SS--------------S---------------S---------------------------------
---------S-------------------------------S--------------------------------------
SS-SSSSSSSSSSSSSSSSS------------------------------------------------------------
-------------S-------------------------------------------------------------S----
---------------------------------------------------------------------------S-S-S
--------------------------S--------------------------S--------------------------
------------------------------S--------S----------------------------------------
-----------------------------------------------------S--------------------------
-----------------------------------------------------------------------S---S----
---S-S-S------S-----------------------S---------------------------S-------------
----------------------------------------------S------------------------S--------
-----S---------S---------------SSSS--SSSSSS---SS-SSS-SSS-SS---------------------
-----------------------S-----------------S--------------------------------------
--------------------------------------------------------------------------------
----------------SS-S--------------------------------------S---------------------
-------------------------S------------------------S-S-S--SS---SSS---------------
----S----------------------S--S------------------------------S-----S------------
----------------S----S-----S--------SS-S----------------------------------------
--------------------------------------------------S---S-------------------------
---------------------------S----------------------------------S-----------------
---S-----------------------------------S-------------------------------------S--
--------------------------------------------------S-----------------------------
-----------S--S---------SS---------------SSSSSSSS-SS----S-----------------------
-----S-S------S----S-------------------------S------S---------------------------
-S------------------------------------------------------------------------------
------------------SSSSSSSSSSSSSSSSS--------S-------------------S----------------
----S------------------S--------------------------------S---------S-----------S-
-------------------------S------------------------------S------------S-------S--
-----------S--------------------------------------------------------------------
------------------------------------------------------------------S-------------
----------S-------------------------------------------------------------S-------
---------------S----------S------------------------------S---S------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
----------S------------------------------------------------S--------------------
-----------------S-------------------------------------------S------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
----SSSSS-------------S---------------------------------------------------------
------------------------------------S----------S--------------------------------
--------------------------------------------------------------------------------
----------------------------------------------SSS-------------------------------
----------S---------------S--------------------------------S----S---------------
-----S-----------S--------S-------------------------S------------------S-----S--
-------------S----------------------S------------------------S-------------S----
----S----------------------------------------------------------S----S-----------
------S-------------------------------
>forward_175
--------------------------------------------------------------------------------
---------------------------------------------------------------------------CGATC
GCAACGTTGAGTTCC-----------------------------------------------------------------
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>reverse_2053
--------------------------------------------------------------------------------
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----------------------------------------------------GCAGGCATCCGGATTTCTTG--------
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>forward_1743
--------------------------------------------------------------------------------
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-------------------------------------------TGGCAACCACGTTAAATCGC-----------------
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>reverse_3288
--------------------------------------------------------------------------------
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-------TTCTGAATGGAGCCTTGGGC-----------------------------------------------------
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