>input_sequence_48214
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------ATGAGAAAAAGTTCA
GAAATTTCCATGAAAGCTTCGTCGTCGATGGCAAGCGACGCGTCAGGGAACACTGAACCTGGCCAACAGGGCGTTCGTTT
CAGTTCCATGGACCAGTCTTGCTTTGCAAGACCTGGCCAGTCAATCCCTGGCTACCCCCCATTCTTTGGCCCTCAATCTT
CCAACTTTTACCTTCCTGATGACAGTGTGGCTAAAGCGTGTGATCCGTTTGAACCGAATCCTCCACAGAGCAATCCTGTG
GCAGACTGGGATCCTCAGGCCATGCTGAGCAACCTAACCTTCCTTGAGCAGAAGATCAAGCAGGTGAAAGATATCGTGCA
GTCCATGGGTAACCGAGGGAGCCAAGATGTTGGTGGTTCCTGCGAGCTTGCCGCAAAGCAGCAGCTCGTCACCGCTGATC
TCACTTCCATCATAATTCAGCTCATCTCGACTGCCGGCTCCATGCTTCCTTCCATGAAGACCCCGCTCCTTAGCAGCAAT
CCAGCGGTCAGGCAACTCAACACGCCTGGTTCTCCCATGGGCTTTGGCTCGATTGTGAATCAGCGGCCAAGCACAGTCAG
GGAGGAGATGGTTCCTGACATTAGCAAGACCTCTGATTATGAGGAGCTGATGAATACCCTTAACACAGCGCATGATGAAA
AGGATGATCTGATCAACTGCCCAAATCCTTGTGTCGGGGAAGGGCCTGAGCCGGTTCCGATGGAAGACCATGACGTGAAG
GAGAGCGATGATGGTGGTGAGGCAGAGCACCTCCCCCCTGGTTCTTATGTGGTCTTGCAGTTGGAGAAGGAGGAAATTTT
AGCACCACATACTCATTTCTGTGTGATATGTGGGAAGGGTTTCAAGAGGGATGCTAACCTAAGGATGCACATGAGGGGCC
ATGGAGACGAGTACAAGACTCCCGCAGCTCTTGCCAAACCCATGAGAGATTCTGGCTCAGATCCTACACCAGTTACAAGG
TACTCGTGCCCATATGTCGGTTGCAAGCGGAACAAAGAGCACAGGAAGTTCCAGCCCCTCAAGACAATCTTGTGTGTGAA
GAACCACTACAAGAGAAGCCACTGTGACAAGAGGTATACCTGCAGCCGATGCAATACCAAGAAGTTCTCAGTCATTGCGG
ACTTGAAGACTCATGAGAAGCACTGCGGGCGTGACAAGTGGCTCTGCTCATGTGGAACAACTTTCTCAAGAAAGGACAAG
CTGTTCGGCCATGTCGCGCTTTTCCAAGGGCACACACCTGCTCTAGCAATGGATGATATTAAAGCAACAGGAGCATCGGA
GCAGCCTCAGGGGAGCGAGGCGATGGACGACATGGTGGGGAGCACAGGGTATAACTTCCCAGGCAGCACGTCTGATGGTA
TTCCGAATCTAGACATGAAAGTTGCCGATGACACACGTGGTTATTTCTCGCCCTTGAACTTCGACCCGTGCTTCGGCGCC
CTCGATGACTTCGCCCCCCCTGGATTCGACATCTCCGAGAACCCCTTCTCCTTCCTGCCTTCGGGACCGGGTTCCTGCAG
CTTTGGGCAGCTTAGTGGAGACAGCTGA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>chr3B_1_TraesCS3B01G414500
ATTACAATTTTCAAACCTAACAATAGTCAAATAAAA---TCACAAACAAAATGGTAGCGATCGTCAAAAATCGCCGCCA-
CCCCAAAGAAAGAGGAAAGCATAAAAAGGAAAGAACTTCGCGTCATGTACTGGGTGTAGTTAGGCTCGAAGAACCATTTC
AATATTTTTTTATCTAT-------GTGGAGTGACGAGGCAGCCATATGTTGTTGCCACCAGTATACATGACCGTAGCAAT
TCACTCTTTTTCAAGTGGGTACATCACAAGCTTGATTGTTTTACCTCCTAAATTGTTGCATACAACTCATGCACGCGGGG
ATCCTACAGTTTGTGCCATAATT---TAAAAATATAGAACATTCTATATACATGTTTTATTTAAAAAACATATTAATTGC
AGAC-TCTGTATATTTCCAAAAAAAATTCATTTATTTTTACT--AGTAATAAAAGGAATAAAAAAAATATCTTCTCTCCT
---AAAATTCCAGAGTCAAACTCCAGCTCCTCCACCACGCTATAGACTTTATCCCCGCTTTCCCGTACCATTCTTTCCTC
TTTCTCCCCTGATTCCAACGCTGCCGCCGCGCCGTAGCTCAGCCTCGCCGCCGACCACCCCAACCCCCTCCACCTCCCAC
GCGAGTCGGCCGGCCGG----CCACCGCCGTCCCTGTTCTTCCTCACCGGGTCCCCGCCGTTTCCACTCCGTCCGGCAAT
CATTGGCCATTGAGGTATGTATGAGCTTTGTTTTCATCCGGTGATTAGCTAAACCCGGCAGGCCATCTAGATCTTAGTCC
CCTGCTTACAGATCTGTCTATGCCTACGGATTAGTTCCATACGTCTAGTTTGGTTGCTGCTGCCGTGTTCAATTTCTTGT
TCTTATGATTTA-TTTTTTACCCGCAGGGTTTGATGCTATTCCTGTCTTATTGTCAATTTCTCATTTGGGGAAGATCGTG
TGAGATAGAAGAGAGGGCGGACTGGATTGTAATCTGAGCTCTGGTGGATCTAGACTGAAAGTTGCATGAGAAAAAGTTCA
GAAATTTCCATGAAAGCTTCGTCGTCGATGGCAAGCGACGCGTCAGGGAACACTGAACCTGGCCAACAGGGCGTTCGTTT
CAGTTCCATGGACCAGTCTTGCTTTGCAAGACCTGGCCAGTCAATCCCTGGCTACCCCCCATTCTTTGGCCCTCAATCTT
CCAACTTTTACCTTCCTGATGACAGTGTGGCTAAAGCGTGTGATCCGTTTGAACCGAATCCTCCACAGAGCAATCCTGTG
GCAGACTGGGATCCTCAGGCCATGCTGAGCAACCTAACCTTCCTTGAGCAGAAGATCAAGCAGGTGAAAGATATCGTGCA
GTCCATGGGTAACCGAGGGAGCCAAGATGTTGGTGGTTCCTGCGAGCTTGCCGCAAAGCAGCAGCTCGTCACCGCTGATC
TCACTTCCATCATAATTCAGCTCATCTCGACTGCCGGCTCCATGCTTCCTTCCATGAAGACCCCGCTCCTTAGCAGCAAT
CCAGCGGTCAGGCAACTCAACACGCCTGGTTCTCCCATGGGCTTTGGCTCGATTGTGAATCAGCGGCCAAGCACAGTCAG
GGAGGAGATGGTTCCTGACATTAGCAAGACCTCTGATTATGAGGAGCTGATGAATACCCTTAACACAGCGCATGATGAAA
AGGATGATCTGATCAACTGCCCAAATCCTTGTGTCGGGGAAGGGCCTGAGCCGGTTCCGATGGAAGACCATGACGTGAAG
GAGAGCGATGATGGTGGTGAGGCAGAGCACCTCCCCCCTGGTTCTTATGTGGTCTTGCAGTTGGAGAAGGAGGAAATTTT
AGCACCACATACTCATTTCTGTGTGATATGTGGGAAGGGTTTCAAGAGGGATGCTAACCTAAGGATGCACATGAGGGGCC
ATGGAGACGAGTACAAGACTCCCGCAGCTCTTGCCAAACCCATGAGAGATTCTGGCTCAGATCCTACACCAGTTACAAGG
TACTCGTGCCCATATGTCGGTTGCAAGCGGAACAAAGAGCACAGGAAGTTCCAGCCCCTCAAGACAATCTTGTGTGTGAA
GAACCACTACAAGAGAAGCCACTGTGACAAGAGGTATACCTGCAGCCGATGCAATACCAAGAAGTTCTCAGTCATTGCGG
ACTTGAAGACTCATGAGAAGCACTGCGGGCGTGACAAGTGGCTCTGCTCATGTGGAACAACTTTCTCAAGAAAGGACAAG
CTGTTCGGCCATGTCGCGCTTTTCCAAGGGCACACACCTGCTCTAGCAATGGATGATATTAAAGCAACAGGAGCATCGGA
GCAGCCTCAGGGGAGCGAGGCGATGGACGACATGGTGGGGAGCACAGGGTATAACTTCCCAGGCAGCACGTCTGATGGTA
TTCCGAATCTAGACATGAAAGTTGCCGATGACACACGTGGTTATTTCTCGCCCTTGAACTTCGACCCGTGCTTCGGCGCC
CTCGATGACTTCGCCCCCCCTGGATTCGACATCTCCGAGAACCCCTTCTCCTTCCTGCCTTCGGGACCGGGTTCCTGCAG
CTTTGGGCAGCTTAGTGGAGACAGCTGATGGAGATCGTCACCGTAGACAACCATGATGGTGTCGATCGTTATGTATGAAT
GTTATATGTATGATCATCTCAGTTCTTCCTCTATTCAGGGAGCCATTTTGGTCCATGCCTCTTTCTTAAGTGTACTTTTA
GTTTGTGGTCATCAATAATGAT------CTTACATATAGATTTGAAAGTCACAATTGTTAAATAT--ATATTATTTTCTT
TAACTGTGTTGGCGCTTC---GCAATCAATATCTTGTCATATCAGGGTGGAAGAACAACAAAATAA--------------
-----AAACATTGAATGCAATCCCAGCTTAGCAAAAGCCAAGATTGAGTA------------------------------
--------------------------------------------------------------------TTGCTTATC--T
TTTGATCTTACTGGAAACTTCACCTATTCCGAAATTTATCTCCTGGACAAATTAATTTCAGTTGGAGCAATCTGTTAAAA
TAGATCACATTTTCAGGGAAAATAGCATCAGGATTGCATCAGCATATCAATTGATCCTCG--CAGAATATTTTAGCAGGT
CAAGTAACCACATCAAGGCAAACAAATAGAGCTCATACAGCCAACCAAATAAAATAATAAAAATACATAATAAAATAAAA
CGAAACCAAACAGCTGCATTTCTCATGGCCCTCATTGATGGACACTCACATCAATACATCAAAAGAATGCACCACCATCC
ATAGCCTGCGAAAATATCTAGACTTGATAGGA--CCAGTTGACATCTCAGGAAAATTAGATTCGATTTATCATTCAGG-G
CGGCAACAGAAAGATGGATGCTTACTACACAAATTGGCAAATTATATAACAAGCCAGGAGCGGTCTCTCTAGGTAGTAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CCAGT-ACTCTTGAATAATTTGCTCTT
TGATTGAGCGCATACTAATATAGTACATAGATATCCAGATGTATACTAGAAAATGTACATCAACTCCTGCCAGATAATAG
TCCAATGTCCAGCCTGGGGATAACTGCTGGCACCCTACTACTCTAGTTCCCAATAACGATCTCGTCGAAGTTCCAGTCCC
TGACAAGATCCCTTGAAA
>chr3D_1
ATTACAATTTCCAAACCTAACAATAATAATAAAATAAATTCACAAACAGAATGATAGCGATCGTCGAAAATCGCCGCCGC
CCCCAAAGAAAGAGGAAAGCAAAAAAAGGAAAGAACTTCATGGCATGCATTGGGTGTAGTTAGGCTCGAACAACCATTTC
AATATTTTTTTATCTAT-------GTGGAGTGACGAGGCGGCCATATGTTGTTGCCACTAGTATACATGACCGTAGCAAT
TCACTCTTTTCCATGCGTGTACATCACAAGCTTGAATTTTTTACCTCCTAAATTGTTGCATACAACTCATGCACGCGGGG
ATCCTACAGTTTGTGCCATGATAAAATAAAAATATAGAACATTCTATATACATGTTTTATTTAAAA-ACATATTAATTGC
AGACTTTTACATGTTTCCAAGTATTTTCATTTATTTAGTTATTAAGTAATAAAAGGAATAAAAA-AATATCTTCTCTCCT
TCTAAAATTCCAGAGTCAAACTCCATCTCCTCCACCACGCTATAGACTTCATCCCCGCTTTCCCGTACCATTCTTTCCTC
TTTCTCCCCTGATTCCAACGCTGCCGCCGCGCCGTAGCTCAGCCTCGCCGCCGACCACCCCAATCCCCTCCACCTCCCAC
GCGCGT----CGGCCGG----CCACCGCCGTCCCTGTTCTTCCTCGCCGGGTCCCCGCCGTTTCCACTCCGTCCGGCAAT
CATTGGCCATTGAGGTATGTATGGGCTTTGCTTTCATCCGGTGATTAGCTAAACCCGGCAGGCCATGTAGATCTTGGTCC
TCTGCTTACAGATCTGTCTATGCCTACGGATTAGTTCCATACGTCTAGTTTGGCAGCTGCTGCCGTGTTCAATTTCTTGT
TCTTATGATTTAC-TTTTTACCTGCAGGGTTTGATGCTTTTCCTGTCTTATTATCAATTTCTCATTTGGGGAAGATCGTG
TGAGATAGAAGAGAGGGCGGACTGGATTGTAATCTGAGGTCTAGTGGATCTAAACTGAAAGTTGCATGAGAAAAAGTTCA
GAAATTTCCATGAAAGCTTCGTCGTCGATGGCAAGCGACGCGTCAGGGAACACTGAACCTGGCCAACAGGGTGTTCGTTT
CAGTTCCATGGACCAGTCTTGCTTTGCAAGACCTGGCCAGTCAATCCCTGGCTACCCCCCATTCTTTGGCCCTCAATCTT
CCAACTTTTACCTTCCTGATGACAGTGTGGCTAAAGCGTGTGATCTGTTTGAACCGAATCCTCCACAGAACAATCCTGTG
GCTGATTGGGATCCTCAGGCCATGCTGAGCAACCTAACCTTCCTTGAGCAGAAGATCAAGCAGGTGAAAGATATCGTGCA
GTCCATGGGTAACCGAGGGAGCCAAGATGCTGGTGGTTCCTGCGAGCTTGCTGCAAAGCAGCAGCTCGTCACCGCCGATC
TCACTTCCATCATAATTCAGCTCATCTCAACTGCCGGCTCCATGCTTCCTTCCATGAAGACCCCGCTCCTTAGCAGCAAT
CCAGCGGTCAGGCAGCTCAACACGCCTGGTTCTCCCATGGGCTTTGGCTCGATCGTGAATCAGCGGCCAAGCACAATCAG
GGAGGAGGTGGTTAATGACATTAGCAAGACCTCTGACTATGAGGAGCTGATGAATACCCTTAACACAGCCCATGATGAAA
AGGATGATCTGATCAAATGCCCAAATCCTTGTGTCGGGGAAGGACCTGAGCCGGTTCCGATGGAAGACCATGACGTGAAG
GAGAGCGATGATGGTGGCGAGGCAGAGCACCTCCCCCCTGGTTCTTATGTGGTCTTGCAATTGGAGAAGGAGGAAATTCT
AGCACCACACACTCATTTCTGTGTGATATGTGGCAAGGGTTTCAAGAGGGATGCTAACCTAAGGATGCACATGAGGGGCC
ATGGAGACGAGTACAAGACTCCCGCAGCTCTTGCCAAACCCATGAGAGATTCTGGCTCAGATCCTACACCAGTTACAAGG
TACTCGTGCCCATATGTCGGTTGCAAGCGGAACAAAGAGCACAGGAAGTTCCAGCCTCTCAAGACAATCTTGTGTGTGAA
GAACCACTACAAGAGAAGCCACTGTGACAAGAGGTATACCTGCAGCCGATGCAACACCAAGAAGTTCTCAGTCATTGCTG
ACTTGAAGACTCATGAGAAGCACTGCGGGCGTGACAAGTGGCTCTGCTCATGTGGAACGACCTTCTCAAGAAAAGACAAG
CTGTTCGGGCATGTCGCGCTTTTCCAAGGGCACACACCTGCTCTTCCAATGGATGATATCAAAGCATCAGGAGCATTGGA
GCAGCCTCAGGGGAGCGAGGCGATGGACGACATGGTGGCGAGCACAGGGTATAACTTCCCAGGCAGCACGTCTGATGGTA
TTCCGAATCTAGACATGAAAGTTGCCGATGACACACGTGGTTATTTCTCGCCCTTGAACTTCGACCCGTGCTTCGGTGCC
CTCGATGACTTTGCTCGCCCTGGATTCGACATCTCTGAGAACCCCTTCTCCTTCCTGCCTTCAGGACCGGGGTCGTGCAG
TTTTGGGCAGCTTAGTGGCGACAGCTAATGGAGCTCGTCACCGTTGACAACCATGATGGTGTCGATCGTTATGTATGAAT
GTTATATGTATGACCGTCTTAGTTCTTCCTCTATTCAGGGAGCCATTTTGGTCCATGCCTCTTTCTTAAGTGTACTTTTA
GTTTGTGGTCATCAATAATGATCAAGTACTTACATATAGATTTGAAAGTCACAATTGTTAAATATGTATATCGTTTTCTT
TATCTGCGTTGGTGCCCCGGTGCAATCAATATATTGTCGTAGCACGGTGGTAGAACAACAAAATATTTTTTTTCCAGGTT
GAGTGAAACATCGAATGCAATCCCAGCTGAGCAAAAGCCAAGATGGAGATCAAGATATCAGAGAAGTCAAGAATAGTTTT
GTTCAATCCATAATGGTACCGTACTAGGGCCATTTTTATTCCCAATTTTACCTCTTCCGGTGAAATATTTGACTATCATT
TTTTATCTTACTGGGAACTGCACCTGTTCTGAAATTTATCTCCTGGACAAATTAATTTCTGTTGGAGCAGTCTGTTAAAC
TTTGTCACATTTTCATGGGAAATAACATTAGGAATGCATCAGCGCATCAACTGATCCTCGGTCAGAATATTTTATCAGGT
CAAGTAACCACATCAAGGCAAACAAACAAAGCTCTTACAGCCAGCCAAAAAAAT-----AAAAAATACTAAAAAATAAAC
CGAAACTAAATAGCTGGATTTCCCATGGCCCTCATGGATGGACACTTGACATCAACACA----------CACCACCATCC
ATAGGCTTTGAAAATATCTCTAGACTTGG---------------------------TAGATTCGATTTATCATCCAGACG
CGGGAACAGAAAAATGGTTGCTTACTACACAAATCGGCAAATTATATAACAAGCCAGGAGCAGTCTCTATAGGTAGTAA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------CCAGTAACTCTTAAACAATTTGCTCTT
TGATTGAGCGCGTACTAATATAGTACATAGATATCCAGATGTATACTAGAAAATGTACATCAACTCGTGCCAGATAATAA
TCCAATGTCCAGCCTGGGGATAACTGCTGGCACCCTACTACTCTAGTTCCCAATAACGATCTCGTCGAAGTTCCAGTCCC
TGACAAGATCCCTTGAAA
>chr3A_65
-------------------------------------------------------------------AAATCGCCGCCGT
CCCCAAAGAAAGAGGGA---AAAAAGAGGAAAGAACTTCACGCCATGCATTGGGTGTAGTTAGGCTCGAACACCCATTTC
AATATCTTTTTATCTATGTGGAGAGTGGAGTGACGAGGCGGCCATATGTTGTTGCCACTAGCATACATGACCGTAGCAAT
TCACGCTTTTCCATGCGTGTACATCACAAGCTTGAATTTTTTACCTCCTAAATTGTTGCGTACAACTCATGCACGCGGGG
ATCCTACAGTTTGTGCCATAGTTAAAT--AAATATAGAACATTCTATATACATTTTTATCTAAA-------ATTAATTCC
AGAC-TTTATATGTTTCCAAATATTTTCATTTATTTTTTACT--AGTAATAAAAGGAATAAAAA-AATATCTTCTCTCCT
TCTAAAATTCCAGAGTCAAACTCCATCTCCTCCACCACGCTATAGACTTTATCCCCGCTTTCCCGTACCATTCTTTCCTC
TTTTTCCCCTGATTCCAACGCTGCCGCCGCGCCGTAGCTCAGCCTCGCCGCCAACCACCCCAATCCCCTCCACCACCCAC
GCGCGT----GGGCCGGCCGGCCACCGCCGCCCCTGCTCTTCCTCGCCGGGTCCCCGCCGTTTCCACTCCGTCCGGCAAT
CATTGGCCATTGAGGTATGCCCTTGTG----TTTCATCCAGTGATTAGCTAAACCCGGCAGGCCATCTAGATCTTGGTGC
GCTGCTTACAGATCTGCCGGTGCCTACGGAGTAGTTCCATACGTCTAGTTTGATTGCTGCTGCCGTGTTCAATTTCTTGT
TCTTATGATTTTTTTTTCTACCCGCAGGGTTTGATGCTTTTCCTGTCCTATTATCAATTTCTCGTTTGGGGAAGATCGTG
CGAGATAGAAGAAAGGGCGGACTGGATTGTAATCTGAGCTCTGGTGGATCTAGACTGGAAGTTGCATGAGAAAAAGTTCA
GAAATTTCCATGAAAGCTTCGTCGTCGATGGCAAGCGACGCTTCAGGGAACACTGACCCTGGCCAACAGGGTGCTCGTTT
CAGTTCCATGGACCAGTCTTGCTTTGCAAGACCTGGCCAGTCAATCCCTGGCTACCCCCCATTCTTTGGCCCTCAGTCTT
CCAACTTTTACCTTCCTGATGACAGTGTGGCTAAAGCGTGTGATCCGTTCGAGCCGAATCCTCCTCAGAACAATCCTGTG
GCAGATTGGGACCCTCAGGCCATGCTGAGCAACCTAACCTTCCTTGAGCAGAAGATCAAGCAGGTGAAAGATATCGTGCA
GTCCATGGGTAACCGAGGGAGCCAAGATGTTGGTGGTTCCTGCGAGCTTGCCGCAAAGCAGCAGCTCGTCACCGCTGATC
TCACTTCCATCATAATTCAGCTCATCTCGACTGCCGGCTCCATGCTTCCTTCCATGAAGACCCCGCTGCTTAGCAGCAAT
CCAGCGGTCAGGCAGCTCAACACGCCTGGTTCTCCCATGGGCTTTGGCTCGATTGTGAATCAGCGGCCAAGCACAGTCAG
GGAGGAGATGGTTCCTGACATTACCAAGACCCCTGACTATGAGGATCTGATGAATACCCTTAATCCAGCCCATGATGAAA
AGGATGATCTGATCAAATGCCCAAATCCTTGTGTTGGGGAAGGGCCTGAGCCGGTTCCGATGGAAGACCATGACGTGAAG
GAGAGCGATGATGGTGGCGAGGCAGAGCATCTCCCCCCTGGTTCTTATGTGGTCTTGCAATTGGAGAAGGAGGAGATTTT
AGCACCACACACTCATTTCTGTGTGATATGTGGCAAGGGTTTCAAGAGGGATGCTAACCTAAGGATGCACATGAGGGGCC
ATGGAGACGAGTACAAAACTCCCGCAGCTCTTGCCAAACCCATGAGAGATTCTGTCTCAGATCCTACACCAGTTACAAGG
TACTCGTGCCCATATGTCGGTTGCAAGCGCAACAAAGAGCACAGGAAGTTCCAGCCCCTCAAGACAATCTTGTGTGTGAA
GAACCACTACAAGAGAAGCCATTGCGACAAGAGGTATACCTGCAGCCGATGCAACACCAAGAAGTTCTCAGTCATTGCGG
ACTTGAAGACTCATGAGAAGCACTGTGGGCGTGACAAGTGGCTCTGCTCATGTGGAACAACTTTCTCAAGAAAGGACAAG
CTGTTCGGCCATGTCGCGCTTTTCCAAGGGCACACACCTGCTCTTCCAATGGATGATATTAAAGCAACAGGAGCATCGGA
GCAGA------GGAGCGAGGCGATGGACGACATGGTGGGGAGCACAGGGTATAACTTCCCAGGCAGCACGTCTGATGGTA
TTCCGAATCTAGACATGAAAGTTGCCGATGACACACGTGGTTATTTCTCTCCCTTGAACTTCGACCCCTGCTTCGGCGCC
CTCGATGACTTCGCCCGACCTGGATTCGACATCTCCGAGAACCCCTTCTCCTTCCTGCCTTCAGGACCGGGTTCTTGCAG
CTTTGGGCAGCTTAGTGGAGACAGCTGATGGAGTTCGTCGCCGTAGACAACCATGATGGTGTCGATTGTTATGTATGAAT
GTTATATGTATGACCGTCTCAGTTCTTCCTCTATTCAGGGAGCCATTTTGGTCCATGCTTCTTTCTTAAGTGTACTTTTA
GTTTGTGGTCATCAATAATGAT------CTTACATATAGATTTGAAAGTCACAATTGTTAAATATAT-TATTATTTTCTT
TATCTGTGTTGGCGCCTC---GCAATCAATATCTTGTCATATCAGGGTGGAAGAGCAACAAAATAA--------------
-----AAACATTGAATGCAATCCCAGCCGAGCAAAAGCCAAGATGGAGATCACCATATCAGTGAAGTCAATAATACTTGT
GA-----------------------------------------AATTTTACCTCTTGTGAAATAGTATTTGCTTATC--A
TTTGGTCTTACTGGCAACTTCAGCTGTTCTGAAATTTATCTCCTGGAC-AATTAATTTCACTTGGAGCAATCTGTTAAAA
TTGATTGCATTTTCATGGAAAATAGCATCAAGATTGCATGAGCACATCAATTGATCCTCGGCCAGAATATTTTAGCAGGT
CAAGTAACCACGTCAAGGCAAACAAATAGAGCTCATACAGCCAGCCAAATGTA-----AAAAATACATAATAAAATAAAA
CGAAACAAAACAGCTGGATTTCTCATGGCCCTCATGGATGGACACTCACACAAATACATCAAAAGAATGCACCACCATCC
ATAGC-TGCGAAAATATCTGGACTTGATAGATCGCCAGTTGACATCTCAATCAAATTAGATTCGATTTATCATTCAGGCG
CGGCAACAGAAAGATGGACGCTTACTACACAAATTGGCAAATTATATAACAAGCCAGGAGCGGTCTCTATAGGTAGTAAC
CAGTACTCTTGTATTACTCCCTCCGTTCCTAAATATTTGTCTTTCTAGACATTTTAAATGACTATTACATACGGATGTAT
GTAGACATGTTTTAGAGTGTAGATTCACTCATTTTGCTCCGTATGTAGTCACTTGTTGAAATGCCTAGAAAGACAAGTAT
TTAGGAACGGAGGGAGTATATAACAAGCCAGGAGCGGTCTCTATAGGTAGTAACCAGT-AGTCTTGAATAATTTGCTCTT
TGATTGAGCGCGTACTAATATAGTACATAGATATCCAGATGTATACTAGAAAATGTACATCAACTCCTGCCAGATAATAG
TCCAATGTCCAGCCTGGGGATAACTGCTGGCACCCTACTACTCTAGTTCCCAACAACGATCTCGTCGAAGTTCCAGTCCC
TGACAAGATCCCTTGAAA
>SNPs
----------S--------------S-S-S-S--S-------------S----S-----------S------------S-
---------------------S-----------------S--S----S-S--------------------S---------
---------------------------------------S------------------S---------------------
----------S--S-S-S-----------------S-S------------------------------------------
------------------------------------------------------------------S-------------
------S-S---S--------S-SSS-SSS--SS------------------------------S---------------
-------------------------S------------------------------------------------------
---------------------------------------------------------------S----------------
---S--SSSS-----------------------------------S----------------------------------
-----------------------S------S--------------------------------------------S----
S-------------------------------------------------------------------------------
--------------------------------------S-------------S---------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-----S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
------------------------------------S--------------------------------S----------
----------------S---------------------------------------------------------------
-----------------S-----------------------------------------S--------------------
---------S-----------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------SS----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------S-----------S-----
---------------------------------S----------------------------------------------
-------------S-S----------------------------------------------------------------
--------------------------------------------------------------------------------
--S------------S----------------------------------------------------------------
----------------------------S---------------S---SS------------------------------
--------------------------------------------------------------------------------
--------------S----------S---S--------------------------------------------------
-S-------------S----------------------------S-----------------------------------
-------------------------------------------S---------SSSSS----------------------
------S---------S------------------S--------------SS----------------------------
-------------------S----------SS-----------------SSS----------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_200
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------CTATGTGGAGTGACGAGGCA----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_1535
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------ACTCAACACGCCTGGTTCTC----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_1286
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------AGAGCAATCCTGTG
GCAGAC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_2497
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CCCCTGGATTCGACATCTCC--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_1778
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AG
GAGAGCGATGATGGTGGT--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>reverse_3287
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------CAAACAGCTGCATTTCTCATGG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
