>input_sequence_48201
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------------------ATGGGCAAGGCGGCGCGCTGGATCCGGGGCTTCCTAGGAGGCGGCGGTAAGAAGGAGCAGAG
CAAGGACCAGAAGCCGATACCTCCGCCAACCAATGCC------------------AAGCGGTGGAGTTTCGGCAAGTCGT
CGCGGGACTCGGCGGAGGCCGCTGCCACCGCTGCGGCTACGTCGGCGCGCGGGGGCAACGTTGCGATCGCGAGGGCGGCT
GAGGCGGCCTGGCTCAGGTCGGTGTACGACGAGACGGAGCGGGAGCAGAGCAAGCACGCCATCGCCGTGGCGGCCGCCAC
CCAAGCGGCGGCCGACGCAGCCGTGGCTGCGGCCCATGCCGCCGTCGCTGTCGTGCGGCTCACCAACAAGGGCCG-----
----------CGCCGCCCACGCCGGCGAGCACCGCGGACCGGCGGCCGCGGCGGTCCGGATCCAGACGGCATTCCGAGGC
TTCTTGGTAAGCATCAATCAGAA--------------------------T------------------------------
ACAGCGATCTCCTGCTGCGCTGTGTTCTTGCCGTGACGAAATCTCGCGCTGGTTTGCAGGCTAAGAAGGCGCTGCGTGCG
CTCAAGGCGCTCGTGAAGCTGCAGGCGCTGGTGCGCGGCTACCTCGTGCGAAAGCAGGCGGCCGCCACGCTGCAGAGCAT
GCAGGCGCTGGTGCGCGCGCAGGCCAGCATGCGCGCCCACCGCGCCGTCGCCAGCGCCGCTCTCCCGCAGC---------
TCCACCATTCTTCTTTCCGGCCGCGCCGCTCCTTGGTAGGCCATCAATTAAACTACTCCGTATGTTTTTTTGATTCCGTT
TGTCAACGTACTCCATCTGTAATCAATGGCGACGATTCTAACGGAAATCATGTCATGTGCAATGGTTGTGG---------
-------------TGCAGCAGGAGCGGTA------CGCGGACGACACGCGGAGCGAGCACGGGGTGGCGGCG---TACAG
CCGGAGACTGTCGGCGAGTATCGAGTCGTCGTC---CTACGGGTACGACCGGAGCCCCAAGATCGTGGAGATGGACACCG
GCAGGCCCAAATCTCGGTCGTCGTCGCGCCGGGCGAGCTCCCCGCTGCTCGACCCGTGCGAGGAGTGGTGCGCCGCCGCC
AACCCCATGTCGTCGCCGCTGCTGCTGCCGTGCCACATGCCAGGCGGCGCGCCGCCCCGCATCGCCGTGCCGACCCCGCG
CCACCTCCCGGAGTACGACTGGTGCGCGATGGAGAAGGCCCGGCCGGCGACGGCGCAGTGCACGCCGCGGTACATGAACG
CGAACGCGCCGGCCACCCCGACCAAGAGCCTGTGCGGCGGCGGCTACTCGTCGTCGTCTCT------------GCTCAAC
TGCCCCAGCTACATGTCCAGCACGCAGTCGTTCGAGGCAAAAGTGCGGTCGCACAGCGCGCCGAAGCAGCGGCCGGAGCC
CCCCACGAACAGGAAGCGGGTGCCGCTGAGCGAGGTGGTGG---TGGTGGAGTCCCGGGCCAGCCTGAGCGGGGTCGGAA
T---GCAGCGGTCGTGCAACCGGGT------GGAGGAGGCGTTCAACTTCAAGACGGCCGTTGTCGGCCGCCTCGACCGC
CCGTCGACGGGGGCCGTCGAGAATGACCGGCAAGCGTTCTTGCAGAGGAGGTGGTGA-----------------------
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>chr1A_1_TraesCS1A01G122900
GTCAGATCTCAACACCCAAGGATATCTTGGTCCGTTGCCTCTTGGCGGTCGTGGGCGGTACGCTCGTGCTGGTACGTGCG
ATCCATATGGCTGTAGCCTTTTGCCATGCCCAGCCTAGCAGTGGTTCGTACGTGGTATATGCGCGCAGTCATGTGTGCAT
GCCCGCGCCTGCGAAGGAGGGAACAGTGACTGGGAGTCGAGCTTCTGTTCACCAGCGAGAAAAAAGGGAGCACTGGAGAC
GGTCTAATCGCATCTCCGGCCGCCCGTCCCGATCTCTGTCATGCGCGCGCGTTATTGAAATTTGTAGGGTTGCTTGGTCG
ATCTGGGCATG------------------------CACTGGACCTACTGTGTGGAGTTTGGAGTCATGCATGCGTGCATT
GTCTTGTTCCGTGGCCGCATCTCCCTCCCTCGTGCCGCTGTTGGGTTTGGGTGTGGGCTTTTCTTGGCAACTTGGCCGCT
GGGGCTGGGGGGCAGCGGCAGATGG----------GCAGTG-----GAGGGCCCGGCCAGGGATAATAAAATGAAAGATG
TTCCATTGTTTTCCTTCTT---TCCTCCTCACGTACAAAACATATTTGCAAGTAAGGCTTTTGGGTGCCAAAAATGAGTT
CCCATCCATCCTTCTCGAGCTGGCCACCTTTAAATTCCCCTTTCTTGTTCGAGTCTTTTTGGGCGTACGCTGTCCCTTTT
TGAACCTTGGGTCGCCCAAAATCTCTTGCATGGCAAATGTCGCTTCCTTGGACGTCGCTAATTCATTTCTTTAATAAATC
CTTTAATGAATTAATTAATTAACGAGAGAGG------G--CCCTGCGCTAATGGCTGCCCTCATCGCGTAGGTAGCCCCC
TTTT----TATCTCCGGCCCGACGCCATCCACGCGCCCCCTTCCGTTTCCCTCTCTTATTCAAACCTCCCCTTCTTTTTC
TACTAGCTCACTCACGCTTCCCACTGCTCTCTTTGTTCACTAGCAGGCCCT----GCCCACCGCCGCCTCTCGCCGGCCG
GAGTCCTCAGGTCCGGCGATGGGCAAGGCGGCGCGCTGGATCCGGGGCTTCCTAGGAGGCGGCGGTAAGAAGGAGCAGAG
CAAGGACCAGAAGCCGATACCTCCGCCAACCAATGCC------------------AAGCGGTGGAGTTTCGGCAAGTCGT
CGCGGGACTCGGCGGAGGCCGCTGCCACCGCTGCGGCTACGTCGGCGCGCGGGGGCAACGTTGCGATCGCGAGGGCGGCT
GAGGCGGCCTGGCTCAGGTCGGTGTACGACGAGACGGAGCGGGAGCAGAGCAAGCACGCCATCGCCGTGGCGGCCGCCAC
CCAAGCGGCGGCCGACGCAGCCGTGGCTGCGGCCCATGCCGCCGTCGCTGTCGTGCGGCTCACCAACAAGGGCCG-----
----------CGCCGCCCACGCCGGCGAGCACCGCGGACCGGCGGCCGCGGCGGTCCGGATCCAGACGGCATTCCGAGGC
TTCTTGGTAAGCATCAATCAGAA--------------------------T------------------------------
ACAGCGATCTCCTGCTGCGCTGTGTTCTTGCCGTGACGAAATCTCGCGCTGGTTTGCAGGCTAAGAAGGCGCTGCGTGCG
CTCAAGGCGCTCGTGAAGCTGCAGGCGCTGGTGCGCGGCTACCTCGTGCGAAAGCAGGCGGCCGCCACGCTGCAGAGCAT
GCAGGCGCTGGTGCGCGCGCAGGCCAGCATGCGCGCCCACCGCGCCGTCGCCAGCGCCGCTCTCCCGCAGC---------
TCCACCATTCTTCTTTCCGGCCGCGCCGCTCCTTGGTAGGCCATCAATTAAACTACTCCGTATGTTTTTTTGATTCCGTT
TGTCAACGTACTCCATCTGTAATCAATGGCGACGATTCTAACGGAAATCATGTCATGTGCAATGGTTGTGG---------
-------------TGCAGCAGGAGCGGTA------CGCGGACGACACGCGGAGCGAGCACGGGGTGGCGGCG---TACAG
CCGGAGACTGTCGGCGAGTATCGAGTCGTCGTC---CTACGGGTACGACCGGAGCCCCAAGATCGTGGAGATGGACACCG
GCAGGCCCAAATCTCGGTCGTCGTCGCGCCGGGCGAGCTCCCCGCTGCTCGACCCGTGCGAGGAGTGGTGCGCCGCCGCC
AACCCCATGTCGTCGCCGCTGCTGCTGCCGTGCCACATGCCAGGCGGCGCGCCGCCCCGCATCGCCGTGCCGACCCCGCG
CCACCTCCCGGAGTACGACTGGTGCGCGATGGAGAAGGCCCGGCCGGCGACGGCGCAGTGCACGCCGCGGTACATGAACG
CGAACGCGCCGGCCACCCCGACCAAGAGCCTGTGCGGCGGCGGCTACTCGTCGTCGTCTCT------------GCTCAAC
TGCCCCAGCTACATGTCCAGCACGCAGTCGTTCGAGGCAAAAGTGCGGTCGCACAGCGCGCCGAAGCAGCGGCCGGAGCC
CCCCACGAACAGGAAGCGGGTGCCGCTGAGCGAGGTGGTGG---TGGTGGAGTCCCGGGCCAGCCTGAGCGGGGTCGGAA
T---GCAGCGGTCGTGCAACCGGGT------GGAGGAGGCGTTCAACTTCAAGACGGCCGTTGTCGGCCGCCTCGACCGC
CCGTCGACGGGGGCCGTCGAGAATGACCGGCAAGCGTTCTTGCAGAGGAGGTGGTGATCTGCTCTGCTCTGTTCTAGCTA
CTTCACACGGTTCATGGCAGTGAGACGACGAGAGCTCTGCGTAGTAATTAGCAATAAGAATGCGTTTTGAGGTGTTCTTG
GGAGCTCTCGTCCCTGCTTTCTTTTTGTTCTTGCATTCATCGTTG---TGATCAATCATGTGATTTGTGTTCCTTTTTCT
TTCTATTTTTTGGTTATGTGTTTGCTGGTCGCAAACAAGTGTGGTAGGAGAATTTGATTCATAGCGCACTTTGATGTAAA
TTCTTTCTCAATCCCTGTGTTCTTCCATTACGACTCGTTCTGTTTTTTGCTTTTGCTCTGCATTATGTTTCTTGTTGATT
CCGAGCTTCAGCCGGGTTTCGTTCCGTTGATAAAAGCATCGTTGGAATGTGGGCGTCAATCCCTCTCTCACACGGTGACA
TGCAAAGGTGCATGTCACCTGATCCCTGTCCATCAAATCCACTCCTCCAATGTCCGCGGATGTGTTCGGCACGTCTGCAT
GCACTGACCGAGCATTCTCTATTTTGTTGCATCCACACTCGTGTATGTCAAATCCAGCCCCTCATATCCATGCAATACAT
GCACGTATGGAAATAAACGCAGGCG--TCAACGAACTAGCACCAAGT---------------------------------
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-----------------------------------------CTAGTTATATCGGGCATAATTGTAGCATCAGCGATCATC
GGACAACCAAAAGATGTGGTTTCAATTGAAAAGTACCATAAAATACGATTGATAAAAAATACTTAATTAAACGGGGAAGG
GCATCGGAGTCGTCCGCCAGCTCCATGTGACACCCGACAAGCCTTCAGAGCAATCATTCCTTCTCCTCGGCGTGCCTTTG
TCGGTGCCTTCCACCGGCGATAGTGAGCCGAGGCCTTCATCGCCGCCTTCGCCGACGCCTCGCGCTCCGACAGCTCGATA
GTGAGCCGGAGCGCCTTGGCGTTCTTCCGCCACAATCGATATGCTTCTGTCTCCGCCATTGTCAAGGAGCGTGGGAGGAC
GGACGCAATGACCACG
>chr1D_2
-TCAGATCTCAACACCCAAGGATATCTTGGTCCGTTGCCTATCGGCGATTCGTGGGC-------------GGTACGTGTG
ATCCATATGGCTGTAGCCTTTTGCCATGCCCAGCCTAGCAGTGGTTCGTACGTGGTATATGCGCGCAGTCATGTGTGCAT
GCCCGCGCCTGCGAAGGAGGGAACAGTGACTGGGAGTCAAGCTTCTGTTCACCGGCGAGAAAAAAGGGAG-ACTGGAGAC
GGTCTAATCGCATCTCCGGCCGCCCGTCCCGATCTCTGTCATGCGCGCGCGTTATTGAAATTTGTAGGGTTGCTTGGTCG
ATCTGGGCATGCACTCTCTCCCCTGCACTGCACTGCACTGGACCTACTGTGTGGAGTTTGGAGTCATGCATGCGTGCATT
GTCTTGTTCCGTGGCCGCGTCTCCCTCCCTCGTGCCCCTGCTGGGTTTGGGTGTGGGCTTTTCTTGGCAACTTGGCCGCT
GGGGCTGGGGGGCAGCGGCAGATGGCTGGCACCGTGCAGTG-----GAGGGCCCGCCCCGGGG---TAAAACGAAACATC
TTCCATTGTTTTCATTCTT---TCCTCACGT------AAACATTTTTCCAAGTAAGG-TTTTCGGTGCCAAAAATGAGTT
CCCGTCG----TTCTCGAGCTGGCCACCTTTAAATTCCCCTTTCTTGTTCGAGTCTTTTTGGGCGTACGCTGTCCCTTTT
TGAACCTTGGGTCGCCCAAAATCTCTTGCATGGCAAATGTCGCTTCCTTGGACGTCGCTAATCCATTTCTTTAATAAATT
CTTTAC--------TTAATTAACGAGAGAGGGAGAGGGGGCCCCGCGCTAATGGCTGCCCTAATAGCGTAGGTAGCCCC-
TTTT----TATCTCCGGCCCGACGCCATCCACGCGCCCCCTTCCGTTTCCCTCTCTTATTCAAACCTCCCCTTCTTTTTC
TACTAGCTCACTCACGCTTCCCACTGCTCTCTTGGTTCACCAGCAAGCCCTGCCCGCCCACCGCCGCCTCTCGCCGGCCG
GAGTCCTCAGGTCCGGCCATGGGCAAGGCGGCGCGCTGGATCCGGGGCTTCCTAGGCGGCGGCGGTAAGAAGGAGCAGAG
CAAGGACCAGAAGCCGATACCTCCGCCAACCAATGCC------------------AAGCGCTGGAGCTTCGGCAAGTCGT
CGCGCGACTCGGCGGAGGCCGCTGCAGCCGCTGCGGCAACGTCGGCGCGCGGGGGCAACGCGGCGATCGCGAGGGCGGCT
GAGGCGGCCTGGCTCAGGTCGGTGTACGACGAGACGGAGCGGGAGCAGAGCAAGCACGCCATCGCCGTGGCGGCGGCCAC
CCAAGCAGCGGCCGACGCGGCCGTGGCTGCGGCCCATGCCGCCGTCGCCGTCGTGCGTCTCACCAACAAGGGCCG-----
----------CGCCGCCCACGCCGGCGAGCACCGCGGACCGGCGGCCGCGGCGGTCCGGATCCAGACGGCATTCCGAGGC
TTCTTGGTAAGCATCTATCAGAA--------------------------TCAGCAAGACCAGTTGCCATCTACTGCAAAT
ACAGCGATCTCCTGCTGCGCTGTGTTCTTGCCGTGACGAAATCTCGCGCTGGTTTGCAGGCTAAGAAGGCGCTGCGTGCG
CTCAAGGCCCTCGTGAAGCTGCAGGCGCTGGTGCGCGGCTACCTCGTGCGAAAGCAGGCGGCCGCCACACTGCAGAGCAT
GCAGGCGCTGGTGCGCGCGCAGGCCAGCATGCGCGCCCACCGCGCCGTCGCCAGCGCCGCTCTCCCGCAGC---------
TCCACCATTCTTCTTTCCGGCCGCGCCGCTCCTTGGTAGGCCATCAATTAAACTATTCCGTATA-TTTTTTGATTCCGTT
TGTCAACGTACTCCATCTGTAATCAATGGCGACGATTCTAATGGAAATCATGCCATGTGCAATGGTTGTGG---------
-------------TGCAGCAGGAGCGGTA------CGCGGACGACACGAGGAGCGAGCACGGGGTGGCGGCG---TACAG
CCGGAGGCTGTCGGCGAGCATCGAGTCGTCGTC---CTACGGGTACGACCGGAGCCCCAAGATCGTGGAGATGGACACCG
GCAGGCCCAAATCTCGGTCGTCGTCGCGCCGGGCGAGCTCCCCGCTGCTCGACCCGTGCGAGGAATGGTGCGCCGCCGCC
AACCCCATGTCGTCGCCGCTGCTGCTGCCGTGCCACATGCCAGGCGGCGCGCCGCCCCGCATCGCCGTGCCGACCCCGCG
CCACCTCCCCGAGTACGACTGGTGCGCGATGGAGAAGGCCCGGCCGGCGACGGCGCAGTGCACGCCGCGGTACATGAACG
CGAACGCGCCGGCCACCCCGACCAAGAGCGTGTGCGGCGGCGGCTACTCGTCCTCATCTCT------------GCTCAAC
TGCCCCAGCTACATGTCCAGCACGCAGTCCTTCGAGGCAAAAGTGCGGTCGCACAGCGCGCCGAAGCAGCGGCCGGAGCC
CCCCACGAACAGGAAGCGGGTGCCGCTGAGCGAGGTGGTGG---TGGTGGAGTCCCGGGCCAGCCTGAGCGGGGTCGGAA
T---GCAGCGGTCGTGCAACCGGGT------GGAGGAGGCGTTCAACTTCAAGACGGCCGTCGTCGGCCGCCTCGACCGC
CCGTCGACGGGGTCCGTCGAGAATGACCGGCAAGCGTCCTTGCAGAGGAGGTGGTGATCTGCTCTGCTCTGTTCTAGCCA
CTTCACACGGTTAATGGCAGTGAGACGACGAGAGCTCTGCGTAGTAATTAGCAATAAGAATGCGTTTTGAGGTGTTCTTG
GGAGCTCTCGTCCCTGCTTTCTTTTTGTTCTTGCTTTAGTAGTTG---TGATCAATCATGTGATTTGTGTTCCTTTTTCT
TTCTATTTTTTGGTTATGTGTTTGCTGGTCGCAAACAAGTGTGGTAGGAGAATTTGATTCATAGCGCACTTTGATGTAAA
TTCCTTCTTAATCCATGTGTTCTTCCATTGCGACTCGTTCTGTTGTTTGCTTTTGCTCTGCATTATGTTTCTTGTTTATT
CAGAGCTTCAGCCGGGTTTCGTTTTGTTGATAAAAGCATCGTTGGAATGTGGGCATCAATCCCTCTCATGCGTCATCCTG
TCAACTAATAAGAGCATCTATAGCGGAAGACATCAAATCCACCGTGG---------------------------------
G--CTGACCGGACACTCCTTATTTTGCTGCGTCCACATTTGTGTATATCAAATCGGGCCCCTCATATCCATACAATACAT
GCACGTATAAAAATAAACTTACGTAGATCAACGAACTAGCACCAAGT---------------------------------
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-----------------------------------------CTAGTTATATCGGGCATAATTATAGCATAAACAATCATC
GGACAACCAAACGATGCAGTTTCAA-------------------------------------------------------
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>chr1B_2
-TCAGATCTCAACACCCAAGGATATCTTGGTCCGTTGCCCCTTGGCGATCGT---------GCTCGTGCTGGTACGTGTG
ATCCATATGGCTGTAGCCTTTTGCCATGCCCAGCCTAGCAGTGGTTCGTACGTGCTATATGCGCGCAGTCATGTGTGCAT
GCCCGCGCCTGCGAAGGAGGGAACAGTGACTGGGAGTCAAGCTTCTGTTCACCAGCGAGAAAAAAGGGAGCACTGGAGAC
GGTCTAATCGCATCTCCGGCCACCCGTCTCGATCTCTGTCATGCGCGCGCGTTATTGAAATTTGTAGGGTTGCTTGGTCG
ATCTGGGCATGCACTCTCGCCCCCGCACT-----GCACTGGACCTACTGTGTGGAGTTTGGAGTCATGCATGCGTGCATT
GTCTTGTTCCGTGGCCGCATCTCCCTCCCTCGTGCACCTGTTGGGTTTGGGTGTGGGCTTTTCTTGGCAACTTGGCCGCT
GGGGCTGGGGGGCAGCGGCAGATGGCTGGCACCCTGCAGTGGAGTGGAGGGCCCGCCCCGGCG---TAAAACCAAACATC
TTGCATTGTTTTCCTTGTTTCCTCCTCACGT------AAACATTTTTCCAAGTAAGG-TTTTGGGTGCCAAAAATGAGTT
CCCATCG----CTCTCGAGCTGGCCACCTTTAAATTCCCCTTTCTTGTTCGAGTCTTTTTGGGCGTACGCTGTCCCTTTT
TGAACCTTGGGTCGCCCAAAATCTCTTGCATGGCAAATGTCGCTTCCTTGGACGTCGCTAATCCATTTCTTTAATG----
------------AATTAATTAACGAGAGAGGAAGAGGG--CCCCGCGCTAATGGCTGCCCTCATCGCGTAGGTAGCCCC-
TTTTTATCTATCTCCGGCCCGACGCCATCCACGCGCCCCCTTCCGTTTCCCTCTCTTATTCAAACCTCCCCTTCTTTTTC
TACTAGCTCACTCACGCTTCCCACTGCTCTCTTGGTTCACTAGCAAGCCCT----GCCCACCGCCGCCTCTCGCCGGCCG
GAGTCCTCACGTCCGGCGATGGGCAAGGCGGCGCGCTGGATCCGGGGCTTCCTAGGCGGCGGCGGTAAGAAGGAGCAGAG
CAAGGACCAGAAGCCGATACCTCCGCCAACCAATGCC------------------AAGCGCTGGAGCTTCGGCAAGTCGT
CGCGGGACTCGGCGGAGGCCGCTGCCACCGCTGCGGCTACGTCGGCGCGCGGGGGCAACGCGGCGATCGCGAGGGCGGCT
GAGGCGGCCTGGCTCAGGTCGGTGTACGACGAGACGGAGCGGGAGCAGAGCAAGCACGCCATCGCCGTGGCGGCCGCCAC
CCAAGCGGCGGCCGACGCGGCCGTCGCTGCGGCCCATGCCGCCGTCGCCGTCGTGCGTCTCACCAACAAGGGCCG-----
----------CGCCGCCCACGCCGGCGAGCACCGCGGACCGGCGGCCGCGGCGGTCCGGATCCAGACGGCATTCCGAGGC
TTCTTGGTAAGCATCAATCAGAA--------------------------TCAGCAAGACCATTTGCCATCTACTGCAAAT
ATAGCGATCTCCTGCTGCGCTGTGTTCTTGCCGTGACGAAATCTCGCGCTGGTTTGCAGGCTAAGAAGGCGCTGCGTGCG
CTCAAGGCGCTGGTGAAGCTCCAAGCGCTGGTGCGCGGCTACCTCGTGCGGAAGCAGGCGGCCGCCACGCTGCAGAGCAT
GCAGGCGCTGGTGCGCGCGCAGGCCAGCATGCGCGCCCACCGCGCTGTCGCCAGCGCCGCTCTCCCGCAGC---------
TCCACCATTCTTCTTTCCGGCCGCGCCGCTCCTTGGTAGGCCATCAATTAAACCACTCCATCTATTTTTTTGATTCCGTT
TGTCAACGTACTCCATCTGTAATCAATGGCGACGATTCTAACGGAAATCATGTCATGTGCAATGGTTGTGG---------
-------------TGTAGCAGGAGCGGTA------CGCGGACGACACGCGGAGCGAGCACGGGGTGGCGGCG---TACAG
CCGGAGGCTGTCGGCGAGCATCGAGTCGTCGTC---CTACGGGTACGACCGGAGCCCCAAGATCGTGGAGATGGACACCG
GCAGGCCCAAATCTCGGTCGTCGTCGCGCCGGGCGAGCTCCCCGCTGCTCGACCCGTGCGAGGAGTGGTGCGCCGCCACC
AACCCCATGTCGTCGCCGCTGCTGCTGCCGTGCCACATGCCAGGCGGCGCGCCGCCCCGCATCGCCGTGCCGACCCCGCG
CCACCTCCCGGAGTACGACTGGTGCGCGATGGAGAAGGCCCGGCCGGCGACGGCGCAGTGCACGCCGCGGTACATGAACG
CGAACGCGCCGGCCACCCCGACCAAGAGCGTGTGCGGCAGCGGCTACTCGTCGTCGTCTCT------------GCTCAAC
TGCCCCAGCTACATGTCCAGCACGCAGTCCTTCGAGGCAAAAGTGCGGTCGCACAGCGCGCCGAAGCAACGGCCGGAGCC
CCCCACAAACAGGAAGCGGGTGCCGCTGAGCGAGGTGGTGG---TGGTGGAGTCTCGGGCCAGCCTGAGCGGGGTCGGAA
T---GCAGCGGTCGTGCAACCGGGT------GGAGGAGGCGTTCAACTTCAAGACGGCCGTCGTCGGCCGCCTCGACCGC
CCGTCGACGGGGTCCGTCGAGAATGACCGGCAAGCGTTCTTGCAGAGGAGGTGGTGATCTGCTCTGCTCTGTTCTAGCCA
CTTCACACGGTTAATGGCAGTGAGACGACGAGAGCTCTGCGTAGTAATTAGCAATAAGAATGCGTTTTGAGGTGTTCTTG
GGAGCTCTCGTCCCTGCTTTCTTTTTGTTCTTGCTTTAGTCGTTGTGATGATCAATCATGTGGTTTGTGTTCCTTTTTCT
TTCTATTTTTTGGTTATGTGTTTGCTGGTCGCAAACAAGTGTGGTAGGAGAATTTGATTCATAGCGCACTTTGATGTAAA
TTCCTTCTCAATCCATGTGTTCTTCCATTACGACTCGCTCTGTTGTTTGCTTTTGCTCTGCATTATGTTTCTTGTTTATT
CACAGCTTCAGCCGGGTTTCGTTCTGTT--------------------------------CCCTCTCATGCGTCATCCTG
TCAACTAATAAGAGCATCTATAGCGGAAGACATCAAATGCACGATGG---------------------------------
GCACTGACCGGACACTCCTTATTTCACTGCGTCCACATTTGTGTATATCAAATCTGGCCCCT-------ATGCAACCCAT
GCACGTATGAAAAT------ACGTAGATCAACAAACTAGCACCAAGTTTAGTTATATCGGGCATAATTGTAACATAAGCG
ATCATCGGACAACCAAAAGATGCAGTTTCAACTTTCAATAGAAAAGTACGATTAAATACGATTAAAAAATACTCGGCGTA
CCTCCTCGCCTTTGCCTTCGTCGCCGCCTTCGCCGACGCCTCACGCTCCGACAGCTCGATAGCGAGCCGGAGCGCCTTGG
CGTTCTTCCGCCGCAGTCGATATGCATCTATCTCTGTTGTTGTCATGGAGCGCCGGAGGACGGACGCAATGAGCGCCGTC
CTCGGGATTGACCGGCACGCGCGCGAGTGCCCGGCGCCTCGCCGACGCGTTGCTCGCCGCCATAGCCTCCCTCGCGCGTT
GCCGCTCGCGACGTGCGGCCCGCGGCTCCGATTCATGCTTCCTCAATCGGCCCGGCGCCGGCGAGGGCACAAGCACCCAA
CGGTGCCAGTGGATGCCCTCCGGAGGTAGAATGGACGTGGTGGAGGCGGGGCGGCGTACCTGGAGTGGGACGAAGCAGAC
TGTGTCCCACCGGTGTTGCGCGCCAGATGGGACGGCCCGGCAACGTCGCCCGCACTGCGATGGCAGGCAAAGAGGGACGA
CACGTCGCTCCGAAGAAATCAAATACGCCCTGGGCACTGACCGACACTCCTTATTTTGCTGCGTCCGCACCTATCTATGT
CAAATCCGGCCCCTCATATCCATGCAACACATGCACCGAGTCTAGTTATATCGGGCATAATTGTAGCATAAGCAATCATC
AAACAACCAAAAGATGCAGTTTCAATTGGAAAGTATGATAAAATGCGAT-----AAAAATACTTAATTAAATGGGGAAGG
GCATCG--------------------------------------------------------------------------
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>chr3B_970
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-------------------------------------------------------------------CTCTGGGCGGCCG
GAGCTCCGGGTTCCGGCGATGGGCAAGGCGGCGAGGTGGCTGCGTGGCTTGCTGGGCGGCGGCGGCAAGAAGGAGCAGGG
GAAGGAGCAGAGGCGCCCGG------CCACGG------CGCCGCACGGGGACAGGAAGCGCTGGAGCTTCTGCAAGTCCA
CCAGGGACTCGGCAGAGGCGGAGGCGGCGGCCGCGGCCG---CGGCGCTCAGCGGCAACGCGGCGATCGCGCGCGCGGCC
GAGGCGGCATGGCTCAAGTCCTTGTACAACGAGACCGAGCGCGAGCAGAGCAAGCACGCCATCGCCGTCGCCGCGGCCAC
CGCGGCGGCGGCGGACGCGGCTATGGCTGCCGCACAGGCAGCCGTGGAGGTCGTGCGGCTCACCAGCAAAGGGCCGACGT
CGACGGTGCTCGCCGACGCCGTCGCGGAGCCCCACGGCCGTGCCTCCGCCGCGGTCAAGATCCAGACGGCGTTCCGTGGC
TTCCTGGTGAGTAATTTCCTTCCTAACAG-------CGGCGCCATGATTTCCGCAGGTTTAAGCGCTGAGTAACCAAATC
AATGCGTGTTGAATTATC-------------------------------------GCAGGCCAAGAAGGCTCTGCGCGCG
CTCAAGGGGCTGGTGAAGCTGCAGGCGCTGGTGCGCGGCTACCTGGTGCGGAAGCAGGCGGCGGCCACGCTGCAGAGCAT
GCAGGCGCTCGTCCGCGCGCAGGCCTGCATCCGCGCTGCCCGCTCGCGCGC---CGCGGCGCTCCCGACGAACCTTCGCG
TCCACCCCACTCCTGTCCGGCCGCGCTACTCGTTGGTAAGTGACCACGGGTCCACGGCCGGCATCGCTTGCGACCAAAGC
AATCGATCTCAATGTCTCTGACCGTCCGAGGTCGCGTTGTTCTAGCTAGCCGACCGTAACAAATGTGCGCGTGCGTGGTT
TCTTGCTTGTGTCTGCAGCAAGAGCGGTACAGCACCACGGAGGATTCCCGGAGCGACCACCGCGTGGCGCCGTACTACAG
CCGCCGGCTGTCGGCGAGCGTGGAGTCGTCGTCGTGCTACGGCTACGACCGGAGCCCCAAGATCGTGGAGATGGACACCG
GCCGGCCCAAGTCGCGCTCCTCCTCGCTCCGGACGACCTCCCCCGGCGCCA------GCGAGGAGTG------CTACGCC
CACTCGGTGTCGTCGCCGCT---------------CATGCCGTGCCGAGCGCCCCCGCGGATCGCGGCGCCCACCGCGCG
CCACTTCCCGGAGTACGAGTGGTGCG------AGAAGGCCCGGCCGGCGACGGCGCAGAGCACGCCCCGGTACACGAGCT
---ACGCGCCGGTGACGCCGACCAAGAGCGTGTGCGGCGGC------TACACCTACAGCAACAGCCCGTCGACGCTCAAC
TGCCCCAGCTACATGTCGAGCACGCAGTCGTCCGTGGCGAAGGTGCGTTCGCAGAGCGCGCCGAAGCAGCGGCCGGAGGA
GGGCGCGGTACGGAAGAGGGTGCCGCTGAGCGAGGTGATCATCCTGCAGGAGGCCCGGGCGAGCCTGGGCGGCGGCGGGG
GCACGCAGAGGTCGTGCAACCGGCCGGCGCAGGAGGAGGCGTTCAGCTTCAAGAAGGCCGTCGTGAGCCGCTTCGACCGC
TCGTCGGAGGCGGCCG----------------------------------------------------------------
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>chr3A_970
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-------------------------------------------------------------------CTCTGGGCGGCCG
GGGCGGCGGGTTCCGGCGATGGGCAAGGCGGCGAGGTGGCTGCGTGGCCTGCTGGGCGGCGGCGGGAAGAAGGAGCAGGG
GAAGGAGCAGAGGCAGCCAG------CCACGGCCGCGGCGCCGCACGGGGACCGGAAGCGCTGGAGCTTCTGCAAGTCCA
CCAGGGACTCGGCCGAGGCGGAGGCGGCGGCCGCGGCCG---CCGCGCTCAGCGGCAACGCGGCGATCGCGCGCGCGGCC
GAGGCGGCGTGGCTCAAGTCCTTGTACAACGAGACCGAGCGGGAGCAGAGCAAGCACGCCATCGCCGTCGCCGCGGCCAC
CGCGGCGGCGGCCGACGCTGCCGTGGCCGCCGCGCAGGCCGCCGTGGAGGTCGTGCGGCTCACCAGCAAAGGGCCGACGT
CCACGGTGCTCGCCGGCGCCGTCGCCGAGCCCCGCGGCCGCGCCTCCGCCGCGGTCAAGATCCAGACGGCGTTCCGTGGA
TTTCTCGTGAGTAACTTCCTGCCGAATATCGAGTATCGACGCCATGATTTCCGCAGGATTAAGCGCCGACTAATGGAATC
AATGCGTGCTTGATTGTC-------------------------------------GCAGGCCAAGAAGGCTCTGCGCGCG
CTCAAGGGGCTGGTGAAGCTGCAGGCGCTGGTGCGCGGCTACCTGGTGCGGAAGCAGGCGGCGGCCACGCTGCAGAGCAT
GCAGGCGCTCGTCCGCGCGCAGGCCTGCATCCGCGCCGCCCGCTCGCGCGC---CGCCGCGCTCCCCACGAACCTTCGCG
TCCACCCGACCCCTGTCCGGCCGCGCTACTCGCTGGTAAGTGACCACGGCCGGCATCG-----TCGCTTGCGACCAAAGC
AATCAATCTCAATGTCTCCGACCGTCCGAGGTCGCGTTGTTCTAGCTAGCCGACCGTGACAAACGCGCGCGTGCGCGGTC
TCTTGCTTGTGTCTGCAGCAAGAGCGGTGCAGCAGCACGGAGGATTCCCGGAGCGACCACGGCGTGGCGCCGTACTACAG
CCGGCGGCTGTCGGCGAGCGTGGAGTCATCGTCGTGCTACGGGTACGACCGGAGCCCCAAGATCGTGGAGATGGACACCG
GGCGGCCCAAGTCGCGCTCCTCCTCGCTCCGCACGACCTCCCCCGGCGCCA------GCGAGGAGTG------CTACGCT
CACTCGGCGTCGTCGCCGCT---------------CATGCCGTGCCGACCGCCCCCGCGGATCGCGGCGCCGACCGCGCG
CCACTTCCCGGAGTACGAGTGGTGCG------AGAAGGCCCGGCCGGCGACGGCGCAGAGCACGCCCCGGTACGCGAGCT
---ACGCGCCGGTGACGCCGACCAAGAGCGCGTGCGGCGACCACGGATACACGTACAGCAACAGCCCGTCGGCGCTCAAC
TGCCCGAGCTACATGTCGGGCACGCGGTCGTCTGTGGCGAAGGTGCGGTCGCAGAGCGCGCCGAAGCAGCGGCCGGAGGA
GGGCGCGGTGCGGAAGAGGGTGCCGCTGAGCGAGGTGATCATCCTGCAGGAGGCCCGGGCGAGCCTGGGCGGCGGCGGGG
GCGCGCAGAGGTCGTGCAACCGGCCGGCGCAGGAGGAGGCGTTCAGCTTCAAGAAGGCCGTGGTGAGCCGCTTCGACCGC
TCGTCGGAGGCGGCCG----------------------------------------------------------------
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>chr3D_994
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-----------TCCGGTGATGGGCAAGGCGGCGAGGTGGCTGCGCGGCCTGCTGGGCGGCGGCGGGAAGAAGGAGCAGGG
GAAGGAGCATAGGCGGCCGGCCACGTCCACGG------CGCCGCACGGGGACAGGAAGCGCTGGAGCTTCTGCAAGTCCA
CCAGGGACTCAGCCGAGGCGGAGGCGGCGGCCGCGGCCG---CCGCGCTCAGCGGCAACGCGGCGATCGCGCGGGCGGCC
GAGGCGGCGTGGCTCAAGTCCTTGTACAACGAGACCGAGCGGGAGCAGAGCAAGCACGCCATCGCCGTCGCCGCGGCCAC
CGCGGCGGCGGCCGACGCTGCCGTGGCCGCGGCGCAGGCCGCCGTGGAGGTCGTGCGGCTCACCAGCAAAGGGCCGACGT
CGACGGTGCTCGCCGTCGCCGTCGCGGAGCCCCGTGGCCGCGCCTCCGCCGCGGTCAAGATCCAGACAGCGTTCCGTGGC
TTCCTGGTGAGTAACTTCCGGCCGAATATCGAGTATCGACGCCATGATTTCCGCAGGATTAAGCGCTGACTAATCGAATC
AATGCGTGTTGAATTACC-------------------------------------GCAGGCCAAGAAGGCTCTGCGCGCG
CTCAAGGGGCTGGTGAAGCTGCAGGCGCTCGTGCGCGGCTACCTGGTGCGCAAGCAGGCGGCGGCCACGCTGCAGAGCAT
GCAGGCGCTCGTCCGCGCGCAGGCCTGCATCCGCGCCGCCCGCTCGCGCGC---CGCCGCGCTCCCCACGAACCTTCGCG
TCCACCCCACTCCTGTCCGGCCGCGCTACTCGCTGGTAAGTGGCCACGGCCGGCATCG-----TCGCTTGCGACCAAAGC
AATCAATCTCAATGTCTCCGACCGTCCGAGGTCGCGTTGTTCTAGCTAGCCGACCGTAACAAACGTGCGCGTGCGCGGTT
TCTTGCTTGTGTCTGCAGCAAGAGCGGTACAGCACCACTGAGGATTCCCGGAGCGACCACAGCGTGGCGCCGTACTACAG
CCGCCGGCTGTCGGCGAGCGTGGAGTCGTCGTCGTGCCACGGGTACGACCGGAGCCCCAAGATCGTGGAGATGGACACCG
GCCGGCCCAAGTCGCGCTCCTCCTCGCTCCGGACGACCTCCCCCGGCGCCA------GCGAGGAGTG------CTACGCC
CACTCGGTGTCGTCGCCGCT---------------CATGCCGTGCCGGGCGCCCCCGCGGATCGCCGCGCCGACCGCGCG
CCACTTCCCGGAGTACGAGTGGTGCG------AGAAGGCCCGGCCGGCGACGGCGCAGAGCACGCCCCGGTACGCGAGCT
---ACGCGCCCGTCACGCCGACCAAGAGCGCGTGCGGCGGC------TACACCTACAGCAACAGCCCGTCGACGCTCAAC
TGCCCCAGCTACATGTCGGGCACGCAGTCGTCCGTGGCGAAGGTGCGGTCGCAGAGCGCGCCGAAGCAGCGGCCGGAGGA
GGGCGCGGTGCGGAAGAGGGTGCCGCTGAGCGAGGTGATCATCCTGCAGGAGGGCCGGGCGAGCCTGAGCGGC------G
GCACGCAGAGGTCGTGCAACCGGCCGGCGCAGGAGGAGGCGTTCAGCTTCAAGAAGGCCGTGGTGAGCCGCTTCGACCGC
TCGTCGGAGGCGGCCG----------------------------------------------------------------
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>SNPs
S----------------------------------------------S----S--SSSSSS-----------------S-
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
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------------------------------------S-------------------------------------------
-------------------------------------------------------S--S---SSSS-----S----S--S
---------------------------SSSSSSSSSS------S---S---------S----------------------
------SSSSS---------------------------------------------------------------------
--------------------------------------------------------------S----------------S
-----SSSSSSS-------------------------------S-----------------------------------S
--------------------------------------------------------------------------------
---------------------------------S-----------S----------------------------------
--------------------------------------------------------S-----------------------
------------------------------------------------------------S-----S-------------
------------------------------------------------------------SS------------------
--------------------------------------------------------------------------------
------------------S-----------------------------S-------------------------------
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---------------------------------------------------------------S----------------
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------S-----------S-------------------------------------------------------------
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-----------------------------S--------------------------------------------------
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-------------------------------------------------------------S------------------
------------------------------------------------------------------------------S-
------------S-------------------------------------------------------------------
----------------------------------S--SS-----------------------------------------
--------------------------------------------------------------------------------
---S----------S-----------------------------S-------------------------------S---
-S----------------------S-----------------------------S------------SSS-SSSS-SSSS
-SS-SSSS-SSSS-SSS-SSS-S-SSSSSS------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
----------SS--S--SS-------S---S------S-S------S-------SS------------------------
---------S--------SS-S-SS-------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------S---S------
----------------SS----------S------SS-------S----SSSSS-----------------S--------
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_994
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--------------CGCTTCCCACTGCTCTCTTT----------------------------------------------
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>reverse_2087
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------ACTGTCGGCGAGTATCGAGT------------------------------------------------------
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>forward_1097
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--------------------------------------GATCCGGGGCTTCCTAGGA-----------------------
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>reverse_3189
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--------------------------------------------------------------------CACACGGTGACA
TGCAAAGG------------------------------------------------------------------------
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