>input_sequence_48173
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----------------------------------ATGGCTGCGGACGGCGAGAGGTGGGTGGGCCTGGCGGTGGACTTCT
CGGAGGGGAGCCGCGCGGCGCTGCAGTGGGCGGCGGACAACCTGCTCCGCGCCGGCGACAACCTGCTCCTCCTGCACGTC
CTCAAGGACCCCGACTACGAGCAGGGCGAGACCCTCCTCTGGGAGGCCTCCGGCTCCCGTGCGTACCAACCAGACTCCTC
CTA-CTCTTCCTCCCTAGTCCTCCTGCTCTTGCTACTGTACCGCGGCAGTTATATACTCTACTTGTCTGCCTGCTTGCTG
ATCTTGATCTTAGTTTCTGGTCGCGCCCACCAATCACCCCGACCCGTGC-AAGATTCCGATATGTACGAGCCGCGTCGGC
GCAAGGGGTAGCAGTTGCCATGATCCGCACGCGTATGTTCGCCG--ATGTCTGTTGCCTA-CTTGCTTCTTGTCTTGGAA
TTAATTGGTCTGCCTTTTGCTGTACTAGAGCAGAGCAGCAGCAGCAATATCCTGCTCTGGTCGTAGAATTTGTTTTGACC
GGATTTAGGAGGGGGTGCTAGCGAAGACAGAGCATGGCTTGTCCGGGGAGCGGTTGGCAACCGATGTTCGCTCATTCTGC
TCTGTCCACGGGGCTTTCCTAGGTGTCGCTTTAACTCTGGGAGAGAGCAGCGGCGCAGATTTCGGTTAGCCAGATGGCGA
ATTGACCACCCGATCCTAACTCTGGATCTAACCATTTCTTGTTAAGC---------------------------------
----------------------------GCGCTTGCAAATTCAATT-AC---ACAGGGATCATGATTGCTGATTGTC---
--------------------------------------------------------------------------------
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------------------------------------------ATCCATCAGCTCATCCATGGTTCTGTAGTTAGCTAGAT
CATGTTACATGTGCTCATCTGCATGCTATGCTATCTATGCTATGAACAGTGTTAAATATGGACGCATCAACGAAGTAAAT
TAGCTGTTC------------------ATGTGACCATGAATGGCATGTGTGATATTCCTGGTCCATGCAGTTTACATGTG
CAAGATCCTAGCATGCTCACACCTTGTTTATCTAAATAAAGTTGTTTTACAACTGTGGCCTACTGCTCAGTGCTCGCTGT
ACTCGTTTCTTTCTTCCATTTCAGCTTTGATCCCCCTCTCGGAGTTCTCTCACCCTTCAACTGCAAAGAAATATGGGGTG
AAGCCTGATGCTGAAACACTTGACATGCTCAACACCATAGCTAAGCAGAAGGAGGTGACCACTCCACACCATAATGTATC
ACCATCG-TGATCTCCTTGACACATTTGCT-TAACAAGATTCCGAGTTTTCATTTTTCGGCAGGTTGCTGTGGTTTCCAA
AGTCCTGTTTGGAGATCCCCGCGAGAAGCTGTGCCAAGCCATCCATGACATGCCCATCAGCTGCCTGGTCATTGGGAGCA
GGGGCCTTGGCAAGCTCAAGAGGTTGCGACCACCGACCAAATTGACCTCCAAACTCTTCTTCAGCCACATTGTGTGTTTG
TTTCATCATAATAGAGTGCTGATCTTTTGCATCTCTGAACTGCAGGGTGCTCTTGGGCAGCGTCAGCGATTACGTCGTGA
ACAACGCCGCCTGCCCGGTCACCGTTGTCAAGCCAGCGAGTAACCATGCCTGA---------------------------
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--------------------
>chr1B_1_TraesCS1B01G124100
TGTGGGCAAACTGTTGAACGCCCACACACCAGCCCTTTCCGTGTAGTGAAACGGCCGTGTGGGCGACCGGGTGAACGCCC
ACACACCAGACCAGTCCTATGTGGCACTGAAAACATGCCAAGATTCGTGCGCTCACGAACGAACGCGGATCCACGCGTGT
GAGCGAGATGCAGACACCCACACATGTGGGCGTTAACATTTTCAGCCCAAACCGGGAAGAAACAACCGAAAAGAGGAAAA
CACACACAGGAGATTGTGACGTCGATCTCCAAATATCCGTCGGCACCTTCAGTTGTCCCCATCAGAGCTGATGATCGCTC
CAGAAGCATACAGCGCCGTGTACCGGCGCCGTGCCATAGTCGCGCAGCACTTGGCATAGTAGTACGCCTGCTGGCATATA
TTTGGTGGAGAGAGAGAGAGAGAGCGAGGAGTCCACAACACCATTTCTT------------TGAATTGGCAGATACTAGA
AACATGTTTCTCTTGAACATGATTCTTGTAGTCAGT---GGGGAACTTTCAGTTTCTCTACAACTGGCAACAAAAATAA-
-----CCAAGTGGCGAGTATGAATATCCAGATTACAAGTTCAG---------------------------AAATCCATAA
TCCCCGCAAGGAAATCATGACATTTGTCCAGATTACAAACAAACTTGCAGCTCGAAAGCATCTTGTAGATTTTATACT--
---------------------CCAAGTTTTTGAATTTTTTTCCATATTGCGAACAAACATTAGGAGA---AAGAATCTTT
GCAGGAGGCGGAGAGGGAAATTTCCAAACGTGGCCCAGCGGGTGCGCATGTGGGCGCCCTCAATCAATCACGCACACATG
CCATGTACGAGTAGCACCGCACCGCGTCAAACAAATATCCTCTGGCCGACAAGAGAAGGCCACCACCCCCGTCGTCGTCG
TCCTTAATTGTTCCTGCGTCTCCCCACTTCTCCTTCCAAACAGCGGTGCCTCCACCACCACCACCACCACCACCCAAGAG
CCGAGCGAGGAGAGGAGAGGAGAAGACATCGACCATGGCTGCGGACGGCGAGAGGTGGGTGGGCCTGGCGGTGGACTTCT
CGGAGGGGAGCCGCGCGGCGCTGCAGTGGGCGGCGGACAACCTGCTCCGCGCCGGCGACAACCTGCTCCTCCTGCACGTC
CTCAAGGACCCCGACTACGAGCAGGGCGAGACCCTCCTCTGGGAGGCCTCCGGCTCCCGTGCGTACCAACCAGACTCCTC
CTA-CTCTTCCTCCCTAGTCCTCCTGCTCTTGCTACTGTACCGCGGCAGTTATATACTCTACTTGTCTGCCTGCTTGCTG
ATCTTGATCTTAGTTTCTGGTCGCGCCCACCAATCACCCCGACCCGTGC-AAGATTCCGATATGTACGAGCCGCGTCGGC
GCAAGGGGTAGCAGTTGCCATGATCCGCACGCGTATGTTCGCCG--ATGTCTGTTGCCTA-CTTGCTTCTTGTCTTGGAA
TTAATTGGTCTGCCTTTTGCTGTACTAGAGCAGAGCAGCAGCAGCAATATCCTGCTCTGGTCGTAGAATTTGTTTTGACC
GGATTTAGGAGGGGGTGCTAGCGAAGACAGAGCATGGCTTGTCCGGGGAGCGGTTGGCAACCGATGTTCGCTCATTCTGC
TCTGTCCACGGGGCTTTCCTAGGTGTCGCTTTAACTCTGGGAGAGAGCAGCGGCGCAGATTTCGGTTAGCCAGATGGCGA
ATTGACCACCCGATCCTAACTCTGGATCTAACCATTTCTTGTTAAGC---------------------------------
----------------------------GCGCTTGCAAATTCAATT-AC---ACAGGGATCATGATTGCTGATTGTC---
--------------------------------------------------------------------------------
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------------------------------------------ATCCATCAGCTCATCCATGGTTCTGTAGTTAGCTAGAT
CATGTTACATGTGCTCATCTGCATGCTATGCTATCTATGCTATGAACAGTGTTAAATATGGACGCATCAACGAAGTAAAT
TAGCTGTTC------------------ATGTGACCATGAATGGCATGTGTGATATTCCTGGTCCATGCAGTTTACATGTG
CAAGATCCTAGCATGCTCACACCTTGTTTATCTAAATAAAGTTGTTTTACAACTGTGGCCTACTGCTCAGTGCTCGCTGT
ACTCGTTTCTTTCTTCCATTTCAGCTTTGATCCCCCTCTCGGAGTTCTCTCACCCTTCAACTGCAAAGAAATATGGGGTG
AAGCCTGATGCTGAAACACTTGACATGCTCAACACCATAGCTAAGCAGAAGGAGGTGACCACTCCACACCATAATGTATC
ACCATCG-TGATCTCCTTGACACATTTGCT-TAACAAGATTCCGAGTTTTCATTTTTCGGCAGGTTGCTGTGGTTTCCAA
AGTCCTGTTTGGAGATCCCCGCGAGAAGCTGTGCCAAGCCATCCATGACATGCCCATCAGCTGCCTGGTCATTGGGAGCA
GGGGCCTTGGCAAGCTCAAGAGGTTGCGACCACCGACCAAATTGACCTCCAAACTCTTCTTCAGCCACATTGTGTGTTTG
TTTCATCATAATAGAGTGCTGATCTTTTGCATCTCTGAACTGCAGGGTGCTCTTGGGCAGCGTCAGCGATTACGTCGTGA
ACAACGCCGCCTGCCCGGTCACCGTTGTCAAGCCAGCGAGTAACCATGCCTGATCTCATCGTCGCAAATGTCTACATTTG
TTTTAGTTTGCTGGAGTCCTATATATCCAGTTGGCCGCAACTTATTGAACCATCCAGTGTTATTTGTAATAATAATTGAC
AATTAGCCTGTGGATGATTCCCAGGT-TGTGTAATCTGTGCATGTGTCCTGTACATCCTGTACATTTGTGTGCTTATCTT
CAGCTTAGCTTTTGCACCCTGAGTCAGGCCGTGCTGCTGCTTGCTGCATGCGTGATGTTCATACAGTTTCTAGAGTCTGA
ATAAAATGGATTCGATTCTGCTGTTTCTTTTTACGATGGACAGCCATTTTGCCTGGGCTAGCAATTCCGAGGTCCATTGC
AGATGCTAGT----TACTTTAAGCACTGGAAGAAAAGTCACATTACGGTTGCATCTGATACCTCAATGGATCATGATGAT
AAATCTTACTGGCGTTTGTATATGCTTCAAGC-AAGATCAAATAGGAACCATGCAAGCAAGTA-----------------
--------------------------------------------------------------------------------
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------------------------------GAAGGCCACAAACACATGCATCCAAGTTAAAAGTGATATGTTC-------
----CGTCATAATTCACACTACACTGATGAGTTAAAGACATGGAGCTAAATCCCATTGTCATCACACCCTACAGCCTGCA
TCA-----------------------ACTGCGAAAAGTCACGGCAACCAGCCAACCATGTTCCATCGGCCATCACAACAG
CGAAGTTCATCCACCACCACCAGGATAACAAAATGTACAGCAGGGGCCAGGTTTAGCATCTCCGAAGCAGCTCACAGCGG
CCCGAGGAAATCACCAGCCAGCGACGCAAGGAGCTGGAACTGGCGGTCAGCCTCCATCCAGCGGAACCCCATGACCTTGA
AGCGCACGGCGGTGTCCCTCTCCAGCTTCGAGTGGTCGTTCATGAACATGGGGTTCTCGCCGCCCATGTACTTGTAGTCG
CTCATCGACTTCTCTGATAGGAAGATGCTTTCGATCGGCCCAGATTTGAGGAAGACGCCGTGCTTCAGGATCTTCTCCAC
GGAGCCGACCAAGATCTCCC
>chr1D_211
ACCGGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GAAGAAACAACCGAAAAGAGGGAAA
TGCACACAGGAGATTGTGACTTCGACCTCCAAAAATCCATCGGCACCTTCAGCTGTCCCCATCAGGGCTGGTCATCCCTC
CAGAAGCATACGGCGCCGTGTACCGGCGGCGTGCCATAGTCGCGCAGCACTTGGCATAGTAGTACGCCTGTTGGCATATT
TTTGGCGGAGA-------AGAGAAAGAGGAATCCACAACACCGTTTCAAATTTGGCTTTGATGAATTGGCAGAAAGAAAT
TTGTCTCTTGTAGAACCTTCAGCCGGAATTTTCGTCAGAGGGGAACTTTCAGTTGCTGTAGAACGGGCAACAAAAATACA
ATAACCCAAGTCTCGAGTATGGATCTTTTGCAAGTTTCAAAAATTCTATAATTCCTTTTTTTTGCGGGTTAAATCTATAA
TTCCCCCAAGGAGTT-ATGAAATCTGTCCATGCA-------------------GAAATCATCTTGTAAATAGATTACATG
CAGAAATCTGTGATAATTGCCCCAAGTTTCTGAAATA-TTTCCAGATTGCGAACAAACATTAGGAGATAGAAGAATCTTT
GCAGGAGGCAGAGAGGGAAATTTCCAAAGGTGGCCCAGCGGGTGCGCATGTGGGCGCCCTCAATCA----CGCACACATG
ACATGTAGCACC-GCACCGCACCGCGTCAAACAAATATCCTCTGGCCGACAAGAGAAGG---CCACCACCACCGTCGTCG
TCCTTAATTGTTCCTGCGTCTCCCCCC--TTCCTTCCAAACAGCGGTGACCT--CCACCACCTCCACCACCACCCAAGAG
CCGAGCGAGGAGAAGAGAGAAGAGGAGATCGACCATGGCTGCGGACGGCGGGAGGTGGGTGGGCCTGGCGGTGGACTTCT
CGGAGGGGAGCCGCGCGGCGCTGCAGTGGGCGGCGGACAACCTGCTCCGCGCCGGCGACAACCTGCTCCTCCTGCACGTC
CTCAAGGACCCCGACTACGAGCAGGGCGAGACCCTCCTCTGGGAGGCCTCCGGCTCGCGTACGTACCAACTCAACC----
CCTCCTCTTCCTCCCTAGTCCTACTGCTCTTGCTACTGTACCGCAACTAGTTGTG----TACCTGTCAGCCTGCTGGCTG
CTCTTGATCTTAGTTTCTTGTCGCGCCCACCAATCCCCCGAT-CCGTGC-AAGATTCCGATCTGTACGAGCCGCGTCGGC
GCAAGGGGTAGCAGTTGCTATGATCCTTATGCGTATGTTCGTGCTGATTACTTTGCCTACTCTTGCTTCTTGGAATTAG-
-TAAGTGGGCTGCCTTTTGCTGTACCGGAGCAGCGCAGCAGCA---GCATCCTGCTCTGGTCGTAGAATTTGTTTTGACT
ATTAGGATA----GGGGCTAGCGAAGACAGAGCATGGCTTCTTTGGGGAGCGGTTGGCAACTGATGTTCGCTCATCCTGC
TCTGTCCAT-GGGCTTTCCTAGGCGTCGCTTTAGCTCTGGGAGTGAACAGCCGCGCCGATTTTGGTTTGCCGGATGGTGA
ACTGACCAGCCGATCCTAACTCTGGATCGAACCATTTCTTATTAAGCTCTGGGTCTAACCTGTTTGTTTTGTTAAACATT
AGCCTGGATGAACAATAGTAATTTGTTAGCGCTTGCAAATTCAGTT-ACTACACATGGATCATAGGATTTGCTACACTTA
CAATTTAAGCTTCAGAGATCCGTTCTGGCAGCCAATAGGTTCATTTTTAATACTCCCTCCATCCCATAATATCCCGCAGG
TAATAAGAAGCTAAAAAAATGAAGCCCATGTCTTTGAAATCCAACGATCTTTGTAAACACGAAATAGTTGATAACATAAG
TTAGAAAAAAGAAGTTCCAACTCTTTTCAAGCAGTGTTTGTGTTTCTATTGGGCAGAGCAAGAATTTATTGTAAAAAAAG
TGCAAATAAAGTTGACTACATATTTGATCCCTCAGTTAACCAAAATTGTAAAAAAATACAATACGTTTTTTACGCTATAC
TATAGAATACAGCAGTTATGTTCCCTAGAATCAATATACTGTATTCATCAGCTCATCCATCATCGTAGTTAACTAAAC--
---GTTGCATGTGCTGATGTGTATGTGATGCTA---------TGAACAGTGTTAAATATGGACACATCAATTAAATAAAT
TACTAGTTATTCTTGTTCATAGAGCGAATG-AACCATGAATGGCATGTGTGATATTCCTTGTTCATGCAGTTTA------
-----------CATGCTCACACCTTGTTTATCTAAATAAAGTTGTTTTACAACTGTGGCCTACTGCTCAGTGCTCACTGT
ACTCATTTCTTTTTTCCATTTCAGCTTTGATCCCCCTCTCGGAGTTCTCTCACCCTTCAATTGCAAAGAAGTATGGTGTG
AAGCCTGATGCTGAAACGCTGGACATGCTCAACACTATAGCGAAGCAGAAGGAGGTGACCACTCCACACCATAATGTACC
ACCACCG-TGGTCTCCTTGACACATTTGCTGTAACAAGATCCCGCATTTTCATTTTTCGGCAGGTTGCCGTGGTTTCCAA
AGTCCTGTTTGGAGATCCCCGCGAGAAGCTGTGCCAAGCCATCCATGACATGCCCATCAGCTCCCTGGTCATTGGGAGCA
GGGGCCTTGGCAAGCTCAAGAGGTTGCGACCACCGACCAAAC-GACCTCCAAACTGCTCTTCAGGCACAT----TGTTTG
TTTCGTCATAGTAGAGTGCTAATCTTTTGCATCTCTGAACTGCAGGGTGCTCTTGGGCAGCGTCAGCGATTACGTCGTGA
ACAACGCCGCCTGCCCGGTCACCGTTGTCAAGCCAGCGAGTAACCATGCCTGATCTCATGGTCGCAAATGTCTACATGTG
TTTTAGTTTGCCGGAGTCCTATATATCCAGTTGGCCGCAACTTATTGAACCATCCAGTGTTATTCGTAATAATAATTGAC
AATTAGCCTGTGGATGATTCCCAGGT-TGTGTAATCTGTGC--GTGTCCTGTACATCATGTACATTTGTGTGCTTATCTT
CAGCCTAGGTTTTGCCCCATGAGTCGGTCCGTGCTGCTGTTTGTTGCATCCGTGGTGTTCATACAGTTTCTAGAGTCTGA
ATAAAATGGATTCTGCT------------------------------------------------------GTCCATTGC
AGATGCTAGTAATTTTCTTTCAGCATTAAAAGAACAGTCACATTACGGTTGCATCTGATCCCACAGTGGATCATGATGAT
A-ATCCTACTAGCGTGTGTATTTGCTTTAAGCAAAGATCAAATGGGAAGCATGCAAGCAAGTACTCGCTTTGTTTCTAAA
TATAAGTCGTTCTAGAGATTTTAATATTGGCTACATATGGATGTATATAGATAGTCGCGCTATTCGTCATCCTGGGTGAG
GAATAGTTATTCTTCACTCCCTCTCTATTTTGACATAAATGCATCGTATTTTTACGTTTCGTAATTTTTGTCTTATTTTA
TACATAAAAAGAGAATGTAAGAAAATATGCACTCGCCATAAAAAATATTATATGTTACGTAAAATTACGAATGTAAAAAC
ATAGTGTAAAATATACATACTAGTCTTATAACCTATATTTTTGTTTTTTATACCAAATTTTACATATTGAATCAATATGC
ATGTAACTATAAACGTAATTTATTTAGGAAGCGATCGTAAGATTACCTCGGGTGAAGAATAACTTATTCTGCACCCCGGG
TGATGAATAGTAACACTACATAGTTTAGACTATAGATTCACTCATTTTGCTCTGTATGTAGTCCATATTGAAATCTCTAA
AAAGTCTTCTATTTAGGAACGGAGGGAGTAGAAGGCCACAAACACATGCATCCAAGTTAAAAGTGATATGTTCAAACGCA
GGCTCGTCATAATTCACACTACACTGATGAGTTCAAGACATGGAGTTAAATCCCATTGTCATCACACCCTATAGCCTGCA
TCACACTACACTGATGAGTTCAAGACACTGCGAAAAGTCACGGCAACCA--------TGTGCCACCGGCCATCACAACAG
CAAAGTTCATCCACCACCACCAGGATAACAAAATGTACAGCAGGGGCCAGGTTTAGCATCTCCGGAGCAGCTCACAGCGG
CCCGAGGAAATCACCAGCCAGCGACGCAAGGAGCTGGAACTGGCGGTCTGCCTCCATCCAGCGGAACCCCATGACCTTGA
AGCGCACAGCGGTGTCCCTCTCCAGCTTCGAGTGGTCATTCATGAACATGGGGTTCTCGCCGCCCATGTACTTGTAGTCG
CTCATCGATTTCTCCGACAGGAAGATGCTTTCAATCGGCCCCGATTTGAGGAAGACACCGTGCTTGAGGATCTTCTCCAC
GGAGCCGACCAAGATCTCCC
>chr1A_671
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---------------------CCAAGTTTCTGAAATA-TTTCCAGATTGCGAACAAACATTAGGAGAAAGAAGAATCTTT
GCAGGAGGCAGAGAGGGAAATTTCCAAAGGTGTCCCAGCGGGTGCGCATGTGGGCGCCCTCAATCA----CGCACACATG
CCATGTA------GCACCGCACCGCGTCAAACAAATATCCTCTGGCCGACAAGAGAAGG---CCACCACCGTCGTCGTCG
TCCTTAATTGTTCCTGCGTCTCCCAACTTTTCCTTCCAAACAGCGGTG-----------ACCTCCACCACCACCCAAGAG
CCGAGCGAGGAGAAGAGAAGAGATCGG-----CCATGGCTGCGGACGGCGAGAGGTGGGTGGGCCTGGCGGTGGACTTCT
CGGAGGGGAGCCGCGCGGCGCTGCAGTGGGCGGCGGACAACCTGCTCCGCTCCGGCGACAACCTGCTCCTCCTGCACGTC
CTCAAGGACCCCGACTACGAGCAGGGCGAGACCCTCCTCTGGGAGGCCTCCGGCTCGCGTGCGTACCAACCAAACTCCTT
CCTCCTCTTCCTCCCTAGTCCTCCTGTTCTTGCTACTGTACCGCAACCAGTTGTG----TACCTGTCAGCCTGCTTGCTG
CTCCTGATCTTAGTTCCTTGTCGCGCCCACCAATCCCCCCGATCCGTGCTAAGATTCCGATCTGTACGAGCCGCGTCGGC
GCAAGGGGTAGCGGTTGCCATGACCCGCACGCGTATGTTCGTGGTCATGTCTGTTGCCTA-CTTGCTTCTTGTCTTGGAA
TTAATTGGTCTGCCTTTCGCTGTACCGGAGCATAACACCAGCA---ATATCCTGCTCTGGTTGTAGAATTTGTTTTGACT
GGATTTA-GAAGGGGGGCTAGCGAAGACAGAGCATGGCTTGTCCGGGGCGCGGTTGGCAACCGA----------------
----------------TCCTAGGTGTCGCTTTAACTCTGG-----AGCAGCGGCGCCGATTTCGGTTTGCCG-------A
ACTGACCACTCGATCTAAACTCTGGATCTAACCATTTCTTATTAAGCTCCGGGTCTAACCTGTTTGTTTTGCTAAACATT
AACCTGGATGAACAATAGTAATTTGTTGGCGCTTGCAAATTGTAATGACTACACAGGGATCATAGGATTTGCTACACTTC
CAATTTAAGCTTCAGAGAACCGTTCTGTCCGCCAATAGGTTTCTTTTTTTTCTTAATGCACAA-----------------
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------------CAGTTATGTTCCAAAGAATCAAGATACTCTATCCATCATTGCGGCT-----------------TAGAT
TATGTTACATTTTTTAATGTACGG----------------------CAGCGATAAATATGGACGCATCAATGAGTAA---
-ACTAGTTATTCCTGTTCATATAGCGAATTTAACCATGAATGGCTTGTGTGATATTCCTTGTTCATGCAGTTTACATGTG
AAAGATCCTAGTGTGCTCACACCTTGTATCAACG--------TGTTTTACAACTGTGGCCTACTGCTCAGTGCTCACTGT
ACTCATTTCTTTCTTCCATTTCAGCTTTGATCCCCCTCTCGGAGTTCTCTCACCCTTCAACTGCAAAGAAATATGGGGTG
AAGCCTGATGCTGAAACGCTGGACATGCTCAACACTATAGCTAAGCAGAAGGAGGTGACCACTCCAGACCATAATGTATC
ATCATACATGATCTCCTCGACACATTTCCTGTAATAAAATTCCGCGTTTTCATTTGTCGACAGGTCTCCGTGGTTTCAAA
AGTCCTGTTTGGAGATCCCCGCGAGAAGCTGTGCCAAGCCATCCATGACATGCCCATCAGCTCCCTGGTCATTGGGAGCA
GGGGCCTTGGCAAGCTCAAGAGGTTGCGACCACCGGCCAAAC-GACCTCCAAGCTGTTCTTAAGCCACATTGTGTGTTTG
TTTCATCATAATAGAGTGCTGATCTTTTGTATCTCTGAACTGCAGGGTGCTCTTGGGCAGCGTCAGCGATTACGTCGTGA
ACAATGCCGCCTGCCCTGTCACCGTTGTCAAGCCAGCGAGTAACCATGCCTGATCTCATCATCGCAAATGTCCACATGTG
TTTTAGTTTGCCAGAGTCCTATATATCCAGTTGGCCGCAACTTATTGAACCATCCAGTGTTATTTGTAATAATAATTGAC
AATTAGCCTGTGGATGATTCCCAGGTGTGTGTAATCTGTGCATGTGTCCTGTACATCCTGTACATTTGTGTGCTTATCTT
CAGCCTAGCTTTTGCTCCATGAGTCAGTCCGTGCTGCTGTTTGTTG-------------CATACAGTTTGTAGAGTCTGA
ATAAAATGGATTCTGCT------------------------------------------------------GTCCATTGC
AGATGCTAGTAATTTTCTTTCAGCATTAAAAGAACAGTCACATTACGGTTGCATCTGATGCCACAGTGGATCATGATGAT
A-ATCCTACCAGCGTTTGTATTTGCTTTAAGCAAAGATCAAATGGGAAGCATGCAAGCAAG-------------------
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----------------------------TAGAAGGCCACAAACACATGCATCCAGGTTAAAAGTGATATCTTCAAACGCA
GGCTCGTCATAATTCACACTACACTGATGAGTTCAAGACATGGAGCTAAATCCCATTGTCATAACACCCTACAGCTTGCA
TCA-----------------------ACTGCGAAAAGTCACGGCAAACA--------TATGCCATCGCCCATCACAACAG
CAAAGTTCATCCACCACCACCAGGATACCAAAATGTACAGCAGGGACCAGGTTTAGCATCTCCGAAGCAGCTCACAGCGG
CCCGAGGAAATCACCAGCCAGCGACGCAAGGAGCTGGAACTGGCGGTCTGCCTCCATCCAGCGGAACCCCATGACCTTGA
AGCGCACGGCGGTGTCCCTCTCCAGCTTCGAGTGGTCGTTCATGAACAAGGGGTTCTCGCCGCCCATGTACTTGTAGTCG
CTCATCGACTTCTCCGACAGGAAGATGCTTTCGATTGGCCCAGATTTGAGGAAGACGCCGTGCTTGAGGATCTTCTCCAC
GGAGCCGACCAAGATCTCCC
>SNPs
SSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------S---
SS------------------S----S-------S----S-------------S------------S----S-S---S---
-----------S----------------S-----------------------------------------S--------S
-----S-----SSSSSSS-----SS-----S-----------S----SS------------------------S-SS-SS
SSSSSSS--S-SSSSSSSSSSSSSSSSS-SS--SSS------------------S--S--S---S-------------S-
-----------SS--------S--S-SSS-SSSSSSSSSSS-S--------------------------------S----
-S---S------SS-S----S--S------SSSSSSSSSSSSSSSSSSSSSSS----S---------S--SSSS---S--
-----------------------------S----S-SS------S-----------------------------------
---------S------------------S-------------------------------------SSSS----------
-------SS-SSS----------------------------------------------SSS-----S------------
-----------------------------S------------------S-SSSS--------S-----------------
-------------S---------S--S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S---------------S------S
-SS-----------------------------------------SS-SSS-SSSSSSSS---S----S------------
S-----------------S----------------S------S------------------S------------------
-----------------------------------------SS-------------------------------------
-------------------------SS----------------SSS---------------------------------S
-------S--S----S-----------------------------------------------------------S----
--------SS---------------------------------S------------S----------S---S-----S--
-S--------------------------------------S---------------------------------------
---------------------------------------------------------------SSSSSS--S-SSS----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------SS-SS-SSSSSSSSS-----
S--------------S--S------SS------SSSSSSSSS----------------------------S---S-----
--SSS---S----------------------S---------------------------S--S-----------------
S--------------------------------------------------------------------------S----
----S---------------------------------------------------------------------------
-----------------S--S--------------S--------------------------------------------
--------------------------------------------S-----------------------S-----------
--------------------------------------------------------------S-----------------
-----------------------------------------SS------------S------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
----S----------S--S--------S-----------S---S-----S----S-------------------------
-------------SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
---------------S----S----S-SS-----S------------------------S--S--S--------------
-S---S----S----------S-----S---------------S----S-------------------------------
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---------------------------------S----------------------------------------------
-------------------------------------------------SSSSSSSS---S-------------------
-S------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------S--S-----------------------------------------------S--------------
--------------------
>forward_184
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----GAGATGCAGACACCCACACA--------------------------------------------------------
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>reverse_1348
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-------------------------------------------------------------------TGCCTGCTTGCTG
ATCTTGA-------------------------------------------------------------------------
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>forward_1064
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----GCGAGGAGAGGAGAGGAGAA--------------------------------------------------------
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>reverse_3421
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------------------------------------------------------------GCAATTCCGAGGTCCATTGC
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