>input_sequence_48122
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---ATGATGCCGGGGTCAGCCCCGCCGGCCGCCGGGAGCGGCATGTTCGTGCCGACGCAGACGGCGGGCACGGTGCTCTG
CTGCATCTGCGGCGTCTCCATGCAGCCCAACCCGGCCAACATGTGCGCCCGCTGCCTCCGGGCGCGCGTCGACATCACCG
AGGGCGTCCCGCGCAACGCCGCCGTCGTCTACTGCCCCGACTGCTTCTCCTACCTCCAGCCGCCGCGCTCCTGGCTCCGC
GCCGGCCCGGAGTCCCCCGAGCTCCTGCAGATCCTCCTCCGCCGCCTCAAGCACCCGCTCGCCCGCCTCAAGGTCTCGCT
CTCCGGCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCCTCCGCCGCGAGGTCCTCA
ACGGCATCGTCCTCGAGCAGACCCACCCCGTCGAGTTCGTCGTCCACGACCGCCTCTGCGACTCCTGCGCCCGCGCCCAG
GCCAACCCCGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACGTCCCGCACCGCCGCACCTTCCTCTACCTCGAGCA
GCTCCTCATCAAGCATGGCCAGGCCGCGCTCGCCATCCGCGTCGCCTCCGCGCCCGGCGGCCTCGACTTCTTCTTCGGCT
CGCGCTCGCACGCTGCCCGCCTCGTCGACTTCCTTGGTACAGTCGCTCCCATCCAGACCAACACAGCCAAGCAGCTCGTC
TCTCATGACACAAAGAGTTTTATCTACAACTACAAGTACACTTTCTCGGTCGAGATCTGCCCCATATGCCGTGAGGACCT
GATTGCCCTCAGCCCCAAGGCGTCCCGTGATCTTGGTGGGCTAGGCCCGCTCGTCCTCTGCACCAAGGTCACCAATGCCA
TTGCGCTGCTTGACCCCCTCACTCTGCGTGTGCACCATCTGGAGGAGAAGAAGTACCGGGTGTACAACTTCAAGGCCGCT
CTGACTAGCAAGCAGCTCGTGCAGTACATGGTGCTTGATATTGAGCCAGAGTCACCTGAGATCACCATTGATGGATCTCG
GTACCAGCTGGCATATGCGCAGGTCGCCCGGATGTCTGATTTTGGGAAAAATGATACTGTGTTTACAGTCCGAACTCATC
TTGGGCACCGTCTGAACCCTGGTGACCTTGCCCTTGGGTATGATCTCTATGGTGCTAATATGAATGATGATGATATGGAC
AAGGCTTTATTACGCCAGAATTTGCCTGAAGTGGTTCTGGTCAAGAAGAGTTACGAGAAGAGGCCACGCACACGCAGATG
GAAGCTGAAGAGGCTGCCTGTTGAGGAAGACCTTGGGAACAAGGCCAAAGGCGAGGAAGAGAGGAGGGAAAATGAGTATG
ATATGTTTGTTCGTGATTTGGAGTCCGATCCAGAACTAAGGTTTGGGATAAATTTGTACAAGAACGAGGACTACAGGTCA
GAAATGGCATCCACGATTGGCGACGATGTCCCTACTGTGCCAATTGAGGAGTTGATTGAGGACCTAACCCTTGGTGATGA
TGAGGATGAAGAGGAGGAAGAGGGTGCAGATGCTGGTATGGTGGAATGA-------------------------------
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>chr1D_1_TraesCS1D01G195700
ACATGCCACAAG-ACTCGAATATGTCATGTGTCGAGCACTAGCTGCTAGGCGACATGGCAATGCCTTGACAAATCCTGTT
TGGACGTCCGTTGCATTAGCATGGCACCTAGGAATTGCTTCCACGGACCGGGCCCATTACTTGAGTTTATTGCCAGT---
TTTTTTATTATGTTCTCGGTTTCTTCCAATTTAGA-----CTATGTTCTTTCGTTTTCCTTTTACATTTCTTCATGTTTT
CTA--------------------ATTTTTCCTTTTAGATATATACTA--AT-----------------------------
------------------------------------------------------TTTTTATAGATGGATTT-CCCCACAG
TATACAAACATATATTCATAGGAGTATGAACACTATTTTCATCTTTGAACTTTT-AAAAAATACTTACATTTTGTAATGC
ATGTGTATT----------TTTTTTCAAACTCATGATGAATATTTTCCAAATATGTGATGATTTT-CTTAAGTATGCAAT
GAACATTCTTTCAAATACGTGATGGATATTTTTCAAATTCAGGATGAACATTTTTTAAAATACAT---------------
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-----------------------------------GAATGAACAAAATT-TTAAAATACACAATGAGCGACTAATAGTTT
TGAAATGCACGATCTTTATTTTAAATTATGCATACTTGAACATTTTAA--TTTTTCGCAAAATTTTATTCCTTTTTGACA
GCCCATACAAGGGCTGTGTGGGCGTTTCACCTCCTACCCGGCGCTTTAAGCGTCAGATAGGATTGTTTTGTTTTTTGAGG
AAAAGCGTCAGATAGGAGCACTCCGCCATTC------CCCGTCGGCTAGGGCTGCTTTGCTTGTA----GAACCAAAAGG
CCCATTTCGCCCAACGGTGCAGCATCCTGGTTGGTCCAAAAGCCCACGCGGTGTTGGACAACGTAATCGCCTTCGTCACC
GCGACCACAGCGCCGCCGCCTCTCCCTCTCTTCCCCACCTACAAAGCCTACAAAACCCTAGCGAAATATCTCCATCCGAT
CGAGCCCCCTCCCCCC-CCG------------CCCCCACCCCAGCCGATTCGATTCGATTCGATTCAAGCCGCCCCGCGC
AAGATGATGCCGGGGTCAGCCCCGCCGGCCGCCGGGAGCGGCATGTTCGTGCCGACGCAGACGGCGGGCACGGTGCTCTG
CTGCATCTGCGGCGTCTCCATGCAGCCCAACCCGGCCAACATGTGCGCCCGCTGCCTCCGGGCGCGCGTCGACATCACCG
AGGGCGTCCCGCGCAACGCCGCCGTCGTCTACTGCCCCGACTGCTTCTCCTACCTCCAGCCGCCGCGCTCCTGGCTCCGC
GCCGGCCCGGAGTCCCCCGAGCTCCTGCAGATCCTCCTCCGCCGCCTCAAGCACCCGCTCGCCCGCCTCAAGGTCTCGCT
CTCCGGCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCCTCCGCCGCGAGGTCCTCA
ACGGCATCGTCCTCGAGCAGACCCACCCCGTCGAGTTCGTCGTCCACGACCGCCTCTGCGACTCCTGCGCCCGCGCCCAG
GCCAACCCCGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACGTCCCGCACCGCCGCACCTTCCTCTACCTCGAGCA
GCTCCTCATCAAGCATGGCCAGGCCGCGCTCGCCATCCGCGTCGCCTCCGCGCCCGGCGGCCTCGACTTCTTCTTCGGCT
CGCGCTCGCACGCTGCCCGCCTCGTCGACTTCCTTGGTACAGTCGCTCCCATCCAGACCAACACAGCCAAGCAGCTCGTC
TCTCATGACACAAAGAGTTTTATCTACAACTACAAGTACACTTTCTCGGTCGAGATCTGCCCCATATGCCGTGAGGACCT
GATTGCCCTCAGCCCCAAGGCGTCCCGTGATCTTGGTGGGCTAGGCCCGCTCGTCCTCTGCACCAAGGTCACCAATGCCA
TTGCGCTGCTTGACCCCCTCACTCTGCGTGTGCACCATCTGGAGGAGAAGAAGTACCGGGTGTACAACTTCAAGGCCGCT
CTGACTAGCAAGCAGCTCGTGCAGTACATGGTGCTTGATATTGAGCCAGAGTCACCTGAGATCACCATTGATGGATCTCG
GTACCAGCTGGCATATGCGCAGGTCGCCCGGATGTCTGATTTTGGGAAAAATGATACTGTGTTTACAGTCCGAACTCATC
TTGGGCACCGTCTGAACCCTGGTGACCTTGCCCTTGGGTATGATCTCTATGGTGCTAATATGAATGATGATGATATGGAC
AAGGCTTTATTACGCCAGAATTTGCCTGAAGTGGTTCTGGTCAAGAAGAGTTACGAGAAGAGGCCACGCACACGCAGATG
GAAGCTGAAGAGGCTGCCTGTTGAGGAAGACCTTGGGAACAAGGCCAAAGGCGAGGAAGAGAGGAGGGAAAATGAGTATG
ATATGTTTGTTCGTGATTTGGAGTCCGATCCAGAACTAAGGTTTGGGATAAATTTGTACAAGAACGAGGACTACAGGTCA
GAAATGGCATCCACGATTGGCGACGATGTCCCTACTGTGCCAATTGAGGAGTTGATTGAGGACCTAACCCTTGGTGATGA
TGAGGATGAAGAGGAGGAAGAGGGTGCAGATGCTGGTATGGTGGAATGAGCGAGCATGTCTACCTAGACCATCAGTCATG
ACTGTTCATGCCCACTGCCGATCATAGGGCTGACTGCATCTGTTTAATTCATATAAGTTTTGTTTTTCTTTACTGCTATA
AGCTATGAATGTCGGAGGTGTTGCTTAAAAGGTCAAAGTTTTGGATTTCTCTGTTTATTGATGTCGACATTGTTTGAAAC
CATATCTCGTATCTTGGTGTAACAGTAATGTCTGAAGTTAAATACATTTCCTATCATGTCATATGTTTGTGGTATGGTTT
TCAGTTGTCATT-TTTGATTGGTCACAATATCATGGAGTGGATGCAAGATTTGATTCTTCAAACATGTGTTTATATTGCT
GTGTGATTACTGATTATTGGACGTCTCTCAGGGATTAGCTGAATGTTCTTTCCTAGAATGGTCACATGAGAGCTTTTCCC
CTCTTGCTCTGTCTCAATTATTGCTGTGTGATTACTGATTATTGGATGTCTCTCAGGGATTAGCTGAATGTTCTTTCCTA
GGATGGTCACCTGAGAGCTTTTCCCCTCTTGCTCTGTCTCAATTGTATCTATGAATGCAGCTGAATAGCAATTGT-GATT
TTGTTGAGGCTGCATTACAGGTCTCACTGAAAATTGTTCAGCGGGTGGTGTGCTCTGCAGCCCTCTGCTGGTTTGTAATG
CATGGACTCACCCGTGACTAGTTTAGAAGTTAAACAACTTGGTAAGATGGTTATGACATACTACAACGCATGTTTGCTTT
CCTTTTCTTTTCAGTAGAGAATGGCAGAGCTGTTTGTAGTATAATTTGTCAATCGGGATGTTTAGAACATGAATGCACCA
CACTATGTCTCGTATCTTTGTGCCAAAACAGCCCAGTGAACTGATTTGAAATGATGCAGTGTGTGTAGTTGCATTGCTTG
TGTGTTGTACTATAAGTTGAGACATACCTATATCTTTCTGTTCTTCAGTTAGAAATTATTCAACATAGGTGGCTACTTTC
TCCAAGCTCGT
>chr1A_1
ACATGCCACAAGAACTCGAATATGTCATGTGTCGAGCACTAGCTGCTACGTGACATGGCAACGCCCTGACAAATCCTGTT
TGGACGTCCTTTGCGTTAGCATGGCGCGTAGGAATTGCTTCCACAGACCGGGCCCATTACTTGAGTTTATTGCCAGTATT
TTTTTTATTATGTTCTCGGTTTCTTCCGACTTAGA-----CTATGTTCTTTCGTTTTCCTTTTGCATTTCTTCATGTTTT
CTATTTTTGCC-TTTTCTTTTTTCTTTTCACTTATAGATATATACTA--CTCCCTCCGTAAACTAATATAAGAGCGTTTA
GAATACTAAAGTAGTGATCTAAAAGCTCTTATATTAGTTTACGGAGGGAGTAAATTTTTATAGATGGATTTTCCCCATAG
TATACAAACATATATTCATAGGAGTATGAACACTATTTTCATCTTTGAACTTTAAAAAAAACACTTACATTTTGTAATCC
ATGTGTATT----------TTTTTTCAAACTCATGATGAATATTTTTCAAATATGTGATGATTTTTCTTAAATATGCAAT
GAACATTCTTTCAAATACATGATGAATATTTTTTAATTTCAGGATGAACATTTTTTAAAATACATGAATACAACAACAAC
AACAACAACAACAAAGCCTTTAGTCCCAAACAAGTTGGGGTAGGCTAGAGGTGAAACCCATAAGATTTTGCAACCAACTC
ATGGCTCTGGCACATGGATAGCAAGCTTCCACGCACCCCCTGTCCATAGCTAGCTCTTTGTCGATACTTCAATCCTTCAG
GTCTCTCTTAACGGACTCCTCCCATGTCAAAATCGGTCGACCCCGCCCTCTCTTGACATTCTCCGCACGCTTTAGCCGTC
CGCTATGCACTGGAGCTTCTGGAGGCCTGCGCTGAATATGCCCAAACCATCTCAAACGATGTTGGACAAGCTTCTCCTCA
ATTGGTGCTACCCCAACTCTATCTCGTATATCATCATTCCGGACTCGATCCTTCCTCGTGTGGCCACACATCCATCTCAA
CATACGCATTTTCGCCACACCTAACTGTTGAACATGTCGCCTTTTAGTCGGCCAACACTCCGCGCCATACAACATTGCGG
GTCGAACCGCCGTCCTATAGAACTTGCATTTTAGCTTTTGTGGCACTCTCTTGTCACAGAGAATGCCAGAAGCTTGGCGC
CACTTCATCCATCCGTCTTTGATTCGATGGCTCACATCTTCATCAATACCCCCATCCTCCTGCAACATTGACCCCAAATA
CCGAAAGGTGTCCTTCCGAGGTACCATCTGGCCATCAAGGCTAACCTCCTCCTCCTCACAGCTAGTAGTACTGAAACCGC
ACATCATGTACTCGGTTTTAGTTTTACTAAGCCTAAACCCTTTCGATTCCAAGGTTTGTCTCCATAACTCTAACTTCCTA
TTTACCCCCGTCCGACTATCGTCAACTAGTACCACATCATCCGCAAAGAGCATACACCATGGGATATCTCCTTGTATATC
CCTTGTGACCTCATCCATCACCAATGCAAAAAGATAAGGGCTCAAAGCTGACCCCTGATGCAGTCCTATCTTAATCGGGA
ACTCATCGGTGTCGACATCACTTGTTCGAACACTTGTCACAACATTATTGTACATGTCCTTGATGAGGGTAATGTACTTT
GCTGGGACTTTGTGTTTCTCCAAGGCCCACCACATGAATGAACAAAAAAATTAAAATACACAATGAGCGATTAATAATTT
TGAAATGCACGATGCC-ATTTTAAATTATGCATACTTGAACATTTTAA--TTTTTCGCAAAATTTTATTTCCTTTTGACA
GCCCATACAAGGGCTGTGTGGGCGTTTCACTTCCCATTCGACGCTTT---------------------------------
--AAGCGTCAGATAGGAGCACTCCAGAGACCGCCATTCCCGTCGGCTAGGGCTGCTTTGCTTGTAAGTAGAACCAAAAGG
CCCATT-------------CAGCATCCTGGTTGATCCAAAAGCCCACGCGGTGTTGGACAACGTAATCGCCTTCGTCACC
GCGACCACAGCGCCGCCGCCTCT-CCTCTCTTCCCCACCTACAAAGCCTACAAAACCCTAGCGAAACATCTCCATCCGAT
CGAGCCCCCTCCTCCCTCCG------------CCCCCACCCCAGCCGATTCGATTCGATTCAGCCCT-----CCCCGCGC
AAGATGATGCCGGGGTCAGCCCCGCCGGCCGCCGGGAGCGGCATGTTCGTGCCGACGCAGACGGCGGGCACGGTGCTCTG
CTGCATCTGCGGCGTCTCCATGCAGCCCAACCCGGCCAACATGTGCGCCCGCTGCCTCCGGGCGCGCGTCGACATCACCG
AGGGCGTCCCACGCAACGCCGCCGTCGTCTACTGCCCCGACTGCTTCTCCTACCTCCAGCCGCCGCGCTCCTGGCTCCGC
GCCGGCCCGGAGTCCCCCGAGCTCCTGCAGATCCTCCTCCGCCGCCTCAAGCACCCGCTCGCCCGCCTCAAGGTCTCGCT
CTCCGGCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCCTCCGCCGCGAGGTCCTCA
ACGGCATCGTCCTCGAGCAGACCCACCCCGTCGAGTTCGTCGTCCACGACCGCCTCTGCGACTCCTGCGCCCGCGCCCAG
GCCAACCCCGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACGTCCCGCACCGCCGCACCTTCCTCTACCTCGAGCA
GCTCCTCATCAAGCATGGCCAGGCCGCGCTCGCCATCCGCGTCGCCTCGGCTCCCGGCGGCCTCGACTTCTTCTTCGGCT
CGCGCTCGCACGCTGCCCGCCTCGTCGACTTCCTTGGTACAGTCGCTCCCATCCAGACCAACACAGCCAAGCAGCTCGTC
TCTCATGACACAAAGAGTTTTATCTATAACTACAAGTACACTTTCTCGGTCGAGATCTGTCCCATATGCCGTGAGGACCT
GATTGCTCTCAGCCCCAAGGCGTCCCGTGATCTTGGTGGACTAGGCCCGCTCGTCCTCTGCACCAAGGTCACCAATGCCA
TTGCCCTGCTTGACCCCCTCACTCTGCGTGTGCACCATCTGGAGGAGAAGAAGTACCGGGTGTACAACTTCAAGGCCGCT
CTGACTAGCAAGCAGCTCGTGCAGTACATGGTGCTTGATATTGAGACAGAGTCACCTGAGATCACCATTGATGGATCTCG
GTATCAGCTGGCATATGCGCAGGTCGCGCGGATGTCTGATTTTGGGAAAAATGATACTGTGTTTACAGTCCGAACTCATC
TTGGGCACCGTCTGAACCCTGGTGACCTTGCCCTTGGGTATGATCTCTATGGTGCCAATATGAATGATGATGATATGGAC
AAGGCTTTATTACGCCAGAATTTGCCTGAAGTGGTTCTGGTCAAGAAGAGTTACGAGAAGAGGCCACGCACACGCAGATG
GAAGCTGAAGAGGCTGCCTGTTGAGGAAGACCTTGGGAACAAGGCCAAAGGCGAGGAAGAGAGGAGGGAAAATGAGTATG
ATATGTTTGTTCGTGATTTGGAGTCCGATCCAGAACTAAGGTTTGGGATAAATTTGTACAAGAACGAGGACTACAGGTCA
GAAATGGCATCCACGATTGGTGACGATGTCCCTACTGTGCCAATTGAGGAGTTGATTGAGGACCTAACCCTTGGTGATGA
TGAGGATGAAGAGGAGGAAGAGGGTGCAGATGCTGGTATGGTGGAATGAGCGAGCATGTCTACCTAGACCATTGGTCATG
ACTGTTCATGCCCACTGCAGGTCATAGGTCTAACTGCATCTGTTTAATTCATATAAGTTTTGTTTTTCTTTACTGCTATA
AGCTATGAATGTCGGAGGTGTTGCTTAAAAGGTCTAAGTTTTGGATTTCTCTGTTTGTTGATGTCGACATTGTTTGAAAC
CATATCTCGTATCTTTGTGTAACGATAATGTCTTAAGTTAAATACATTTCCTATCATGTCATATGTTTGTGGTATGCTGT
TCAGTCGTCATCGTTTGATTAGTCACAATATCATGGAGTAGATGCAAGATTTGATTCTTGAAACATGTGCATATTGTG--
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-------------------------GTGTGATTACTGATTATTGGATGTCTCTCAGGGATCACCTGAATGTTCTTTTCTA
GAATGGTCACCTAAGAGTTCTTCCCCTCTTGC-CTGTCCCAATTGTATCTATGAATGCAGCTGAATGAGGTATTGCGATT
TTGATAGGGCTCTGTTACAGGTCTCACTGGAAATTGTTTAGCTGTGGTGTGCT---------------------------
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>chr1B_98
--------------------------------------------------------------------------------
------------------GCATGACGCGTAGGAATTGCTTCCACGGACTGGGCCCATTACTTGAGTTTACTGCCATTTTT
TTATTATT---------GGTTTCTTCCGGTTTTGGACTAGCTATGTTCTTTCGTTTTCTTTTAACATTTCTTCATGTTTT
CCAATTTTGCATTTTATTTTTTTATTTTCACTTATATATATATATATATAT-----------------------------
------------------------------------------------------GTTTTCTACATGGATTT-TTCCATAG
TATACAAACATACATTCATAGGAGTATGAACACTATTTTCATCTTTGATCTTTT-AAAAAATACTTAAATTTTGTAATGC
ATGTGTATTATTTATACATTTTTTTCAAACTCATGATGAATATTTTTCAAATATGTGATAATTTTTCTTAAATATCCAAT
GAACATTCTTTAAAATTCAGGATGAACA----------------------------------CAT---------------
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-----------------------------------GAATGAACAAAAAT-TAAAAATACACAATGAGTAATTAATAGTTT
TGAAATGCATGATGTC-ATTTTAAATTATGCATACTTGAACATTTTATTTTTTTTCCTAAAATTTTATTT-CTTTTGACA
GCCCATACAAGGGCTGTGTGGGCGTTTCACCTCCTATTCGCCGCTTT---------------------------------
--AAGCGTCAGAAAAGAACACTCTAGC-ACCGCCATTTCCGTCGGCTAGGGCTGCTTTGCTTGTA----GAATCAAAAGG
CCCATT-------------CAGCATCCTGGTTGGTCCAAAAGCCCACGCGGTGTTCGACAACGTAATCGCCTTCGTCACC
GCGACCACAGCGCCGCCGCCTCT-CCTC-----CCCACCTACAAAGGCTACAAAACCCTAGCAAAATATCCCCATTCGAT
CGAGCCCCTTCCTCCCCCCGCCCCCGCCCCCACCCCCACCCCCGCCGATTCGATTCGATTCGATTCAAGCCGCCCCGCGC
AAGATGATGCCGGGGTCAGCCCCGCCGGCAGCCGGGAGCGGCATGTTCGTGCCGACGCAGACGGCGGGCACGGTGCTCTG
CTGCATCTGCGGCGTCTCCATGCAGCCCAACCCGGCCAACATGTGCGCCCGCTGCCTCCGGGCGCGCGTCGACATCACCG
AGGGCGTCCCGCGCAACGCCGCCGTCGTCTACTGCCCCGACTGCTTCTCCTACCTCCAGCCGCCGCGCTCCTGGCTCCGC
GCCGGCCCGGAGTCCCCCGAGCTCCTGCAGATCCTCCTCCGCCGCCTCAAGCACCCGCTCGCCCGCCTCAAGGTCTCGCT
CTCCGGCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCCGCCTCAAGCTCCGCCTCCGCCGCGAGGTCCTCA
ACGGCATCGTCCTCGAGCAGACCCACTCCGTCGAGTTCGTCGTCCACGACCGCCTCTGCGACTCCTGCGCCCGCGCCCAG
GCCAACCCTGACCAGTGGGTCGCCGTCGTCCAGCTCCGCCAGCACGTCCCGCACCGCCGCACCTTCCTCTACCTCGAGCA
GCTCCTCATCAAGCATGGCCAGGCCGCACTCGCCATCCGCGTCGCCTCGGCTCCCGGCGGCCTCGACTTCTTCTTCGGCT
CGCGCTCGCACGCTGCCCGCCTCGTCGACTTCCTTGGTACAGTCGCTCCCATCCAGACCAACACAGCCAAGCAGCTCGTC
TCTCATGACACAAAGAGTTTTATCTATAACTACAAGTACACTTTCTCGGTCGAGATCTGCCCCATATGCCGTGAGGACCT
GATTGCCCTCAGCCCCAAGGCGTCCCGTGATCTTGGTGGACTAGGCCCGCTCGTCCTCTGCACCAAGGTCACCAATGCCA
TTGCGCTGCTTGACCCGCTCACTCTGCGTGTGCACCATCTGGAGGAGAAGAAGTACAGGGTGTACAACTTCAAGGCCGCT
CTGACTAGCAAGCAGCTCGTGCAGTACATGGTGCTTGATATTGAGCCAGAGTCACCTGAGATCACCATCGATGGATCTCG
GTACCAGCTGGCATATGCGCAGGTCGCCCGCATGTCTGATTTTGGGAAAAATGATACTGTGTTTACAGTACGAACTCATC
TTGGGCACCGTCTGAGCCCTGGGGATCTTGCCCTTGGGTATGATCTCTATGGCGCCAATATGAATGATGATGATATGGAC
AAGGCTTTATTACGCCAGAATTTGCCTGAAGTCATTCTGGTCAAGAAGAGCTATGAGAAGAGGCGACGCACACGCAGATG
GAAGCTGAAGAGGCTGCCTGTTGAGGAAGACCTTGGGAACAAGGCCAAAGGTGAGGAAGAGCGGAGGGAAGATGAGTATA
CAAATTTCCTTGATGAGTTGGAGCGTGATCCAGAAATAAGGTTTACGATAAATCTGTACAAGAACGACGACTACAGGTCA
GAAATGGCATCCACGATTGGTGACGATGTCCCTACTGTGCCAATTGAGGAGTTGATTGAGGACCTAACCCTTGGTGATGA
TGAGGA---------GGAAGACGGTGCAGATGCTGGTATGGTGGAATGAGCGAGCATGTCTACCTACACCATTGGTCATG
ACTGTTCATGCCCACTGCAGGTCATAGGTCTGACTGCATCTGTTTAATTCATATAAGTTTTGTTTTTCTTTACTGCTATA
AGCTATGAATGTCGGAGGTGTTGCTTAAAAGGTCTAAATTTTGGATTTCTCTGTTTGTTGATGTCGACATTGTTTAAAAC
CATATCTCGTATCTTGGTGTAACAATAATGTCTCAAGTTAAATACATTTCCTATCATGTCATATGTTTGTGGAATGGTTT
TCAGTTGTCATT-TTTGATTGGTCACAATATCATGGAGTGGATGCAAGATTTGATTCTTGAAACATGTGTTTATG-----
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--------------------TTGCTGAGTGATTACTGATTATTGGATGTCTTTCAGGGATTAGCTGAATGGTCTTTCCTA
GAATGGTCAACTGAGAGCTTTTCCCCTCTTGCTCTGTCCCAATTGTATCTATGAGTGCAGCTGAATAGCTGTTGT-GATT
TTGTTGAGGCTGCATTACAGGTCTCACTGAAAATTGTTCAGCGGATGGTGTGCTCTGCAGCCCTCTGCTGGTTTGTAATG
CATGGACTCACCCGTGACTAGTTTAGAAGTTAAACAACTTGGTAAGATGGTTATGCG----TACAACGCATGTTTGCTTT
CCTTTTCTTTTCAGTAGAGAATGGCAGAGCTGTTTGTAGTATAATTTGTCAATTGGGATGTTTAGAACATGAATGCACCA
CACTATGTCTCGTGTCTTTGTGCCAAAACAGCCCAGTGAACTGATTTGAAATGATGCAGTGTGTGTAGTTGCATTGCTTG
TGTGTTGG---ATAAGTTGAGACATACCTATATCTTACTGTTCTTCAGTTAGAAATTATTCAACATAGGTGGCTACTTTT
TCCAAGCTCGT
>chr1A_1077
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-------------------------------------------------------------------------------G
CTGCATCCGCAGCGTCTCCATGCAGCCCAACCCGGCCAACATGTATGCCTGCTGCCTTCAGGCGCGCGTTGACATCACCC
AGGGCGTCCCGCGTAACGCCGCCGCCGGCTGCTGCCCCGACTGCTTCTCCTACCTCCAGCCGCAGCGCTCCTGGCTCCGC
GCCGGCCCGGAGTCCCCCGAGC------------------------------ACCCGCTCGCTCGCCTCCGGATCTCGCT
CTCCGGCGTCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCCTCTGCCTCAAGCTCCGCCTCCGCAGCGAGGTCCTCA
ACGACATCGTCCTCGAGCAGACCCACCCCGTCGAGTTCGCCGTCCACGACCGCTTCTGTGACTCGTGCGCCCGCGCCCAG
-CCAAGCCCGACCAGTGGGCCGCCCTCGTCCAGTTCCGCCAGCACGTTCCACACCGCCGCACCTTCCTC--------GCA
GCTCCTCTTCAAGCATGGCCAAACCGCGCTCGCCATCCGCGTCGCCTCGGCTCCCGGCGGCCTCAACTTCTTCTTCGGCT
CACGCTCGCACGCCGCAAGCCTCGTCGTCTTC-TTGGTACAGTCG-----------------------------------
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>chrUn_1078
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CTGCATCCGCGGCTTCTCCAAGCAGCCCAACCCGGCCAACATGTAGGCCCGCTGCCTTCGGGCGCGCGTCGACATCACCG
AGGGCGTCCCGCGCAACGCCGCTGTCGGCTACTGCCTTGACTGCTTCTCCTACCTCTAGCCGCCGCACTCATGGCTCCGC
GCCGGCCCGGAGTCCCC-GAGCTCCTACAGATCCTCCTGCGCCGCCTCAAGCACCCGCTCGCCCGCCTCCGGATCTTGCT
CTCTGGCGCCGAGTTCGTCTTCTCCGAGCCCCACTCCAAGCGCATCCGCCTCAAGCTCCGCCTCCGCCATGAGGTCCTCA
ACGGCATCATCCTCGAGCAGACCCACCCCGTCGAGTTCGTCATCCACGACCGCCTCTGCGACTCGTGCGCCTACGCCCAG
GCCAACG-TGACCAGTGGGTCGCCCTTGTCCAGTTCCGCCAGCACGTTCCACACTGCCGTGCCTTCCTC--------GCA
GCTCCTCTTCAAGCATTGCCATGCCGCGCTCGCCATCCACGTCTCCTCGGCTCCCGGCAGCCTCAACTTCTTCTTCGGCT
TGCGCTCGCACACCGTCCGCCTCGTTGTCTTC-TTGGTACAGTCG-----------------------------------
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>SNPs
------------------------------------------------S-S----------S---S--------------
---------S----S----------S-S----------------------------------------------------
---------------------------S----------------------------------------------------
----------------------------SS---S----------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
----------------------------------------------S------------------------S--------
------------------S-----S--------S--S-------------------------------------------
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-----------------------------------------------S----------------------S---------
-------------S-SS----------------------------------------------------S-S--------
------------------------------------SS--S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS----------------------SS-SSS--------------------------------------------------
------SSSSSSSSSSSSS-------------------------------------------------------------
-----------------------S--------------------------------------------------------
------------S-------------------------------------------------------------------
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------------------------------------------------S--S----------------------------
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--------------------------S-----------------------------------------------------
---------------------------------------S----------------------------------------
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-------------------------------------------------------S------------------------
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--------------------S-----------------------------------------------------------
------------------------------------------------------------------------SS------
------------------S-S-------S---------------------------------------------------
----------------------------------S---------------------S-----------------------
------------------------S--------S----------------------------------------------
-----------------------------------------------------------S--------------SS--SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS------------------------------------------------------------
-S------------------------------------S------------------------------SS---------
--------------------------------------------S-----------------------------------
-------------------------------------------------------SSSSSS-------------------
-----------------------------------------------------S--------------------------
-------------S------------------------------------------------------------------
-------SSSS-------------------------S------------------------------------------S
-----------
>forward_2010
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----------------------------------------------------------------------AACCAAAAGG
CCCATTTCGC----------------------------------------------------------------------
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>reverse_3859
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------------------CGATCATAGGGCTGACTGCA------------------------------------------
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