>input_sequence_48000
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------------------------------------------------------------------TCCCGTGGTAAGCT
AGGGTT----------CTCCTCGTCCCCCGGCGGCAGGATGGGCGGCGGCGCGGCGGGCCACGGCCAGGCCAGCGCTGCC
CCTCCCATGGATCCGGCCGTCCTTGAGCACCGGCGCGAGCC---CCGTGCTCGTGTGCTTCCGCCGCGACGCGGCCTGCA
GGAGACGGCAACGCTGCC---------GATCCCCGACGAGCTCGTGGCGGAGATCTTCCTCCTGCTGCCC---CCAACAG
ATCTGGTCCGCGCCTCCGCCGCCTGCGCCTCGTTCTACCGTCTCGTCGCCAGCCGCTCCTTCCTCCGGCGCTTCCGCAAG
CTCCACCCCCCGCCCCTCCTCGGCTTCCTCGATGACC---GAGTCTTCCACCCCGTAACCCCGCCTTATCCATCCGCGTC
CGCAGCCAACGCCGTCGCCCTCGCCGCCGACTTCTCCTTTTCCTTCCTACCCGGCCCCGCCCGTGACTGGGAGGTCCTGG
ACGTCCGCGACGGCCGCGTCCTCCTTAAGAGGCCCGGCCGGCAGCACCCCGAAA------TGGTGGTGTGTGACCCCTTG
TACCGGCGGTACCTCCTGCTTCCCCTGTTCCCCGACGACCTAGCCGCTTCATTGGAGGGCCCATCCGCGATAAAATGGCG
TGAATCCTTCCTCGTCCCAGCCGGCGACGAGGAGGCAGCAACTGCGGAAGAGACGTCATTCAGAGTTATCTGGATGGCGC
AGTGCAAATTCAGACTGTTCACCTTTGTCTTCTCCTCTCGCACTGGACAATGGGGAGCTGTTCCATCCCCGAGTTGGAGT
GATTTATTTGCTGGCTTGCCAAGTTTGGAGATGGCTACACCTCTCAACACACGCCAATATGCGTATGGCTGCTTTTACTG
GATGGCGGGTTACATGGCAGAAGCTAAAATGCTGGTGCTCGACACCTGGAGGATGGAGTTCTCCGTTGCTGAATCCCCAC
CTGATGGTTTCGCTATGGCCATGGTGGAGGCCGGGGAAGGCAGGGCTGGGGTGTTCGTGCATGCTCATGTGGGATCCAAG
TTCAGTTATAGCATTAGGCAAAATGATGGTGGGAGTTTGAGCCAGTGGCAGGAGAAGAAAACAGTATCATTGGGTTATGG
ATACTACATCATGGGTTCAACGGAGAGGTACTTGTTCTTGTATCAGCTGCAGAGCCCATTGCCTA-ATCCAGGCGTTTTC
ACGCTGGATGTCCAAACATTCCAGCTCGAGAGAGTGTGTGGTCAACACTTGGGCCACGCATATAGTAACTTCCCACCATC
GTTGTTGTTGTCACCGACAGTATGAAACGGTAAACTTCCTATCATATCCAGGTTATATCATTTTTATGGCACACTTGTTT
GATTCCTGACAGTTCATTATTGGGATTGACGACTCTTCTTTAAATGACTTGGTACTTAATTTTTCTGTTCTTTTGGCAAG
GTTAGCTCAGGAGCATAATTGTGATTTGTTTGTTTGTCCATTCTAATTGCCATTTTAAGCTTTTCAATCAAACAAGTAAA
AGAAAGGAAGGATCTTACACACTACGATAAGCATTCCTGAGGGGTCGTGAAATCATAAAGAAAACTGGATTGT-------
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----------------------
>chr6D_1_TraesCS6D01G046800
ATGATCACCACACACATGCCCACACACGCACGGTCTTGAGGTAGACGCCGAGAGGCGGGTGTGGGGAGATGTTGGTGAGC
AGTGGCACAACGAGCGGGAAGATGCTGGTGACATGGAGGAGGGTGGGCGCGCGATCACATGGGACACGGGGGGTGGGGGG
GCGTATCGCCGAGGTAGGGCGCATGCATACAATGCCGACGAGGCGAGTGAGCAGCTGTTGCCGTGGCGTGGTGGAGCTGT
GAGTGGGGGTGGCGTGCCTCATCAAAGCGGGGTGCGAGGGCATGTGTTAGCAAGACATGTGGAGATGGGACTGTGGTATG
GGGACACGTGTAACAGGTTGGTGGAGAGGTGGGGGAGGGACATGGGCCTCCATTCCTCACAGCGGGGAGCTTTGGGTGCC
ACCAAAGAGAAGGACGACGACACGGTTCGCGTGGGCATGGGTGAGAAGGAAGAGTCGCTCGAGAAAATCTTTTACTGAGA
TTGGGTTTTGGCTACTCAAATTTGAGCAGTAGGTGCGCTTCTCAAATTCTTTTTTGATTTTAAACC------------CA
AGTACAATTTGTCATATTATTCGGAAAATGATTTACTTATTCTTTTTAAATACGGAAATAGTCACTCTTCATATTGCTCG
ATTGGGTTGGGATCAGGCTGGGCATTTCCGAGGTCGGGCATTGCAAAGCCTGCCCCAAAACCCTGTCCGGTCTTGTCCCG
CTGTCCATGAGTTTTTCTTGAGCTTAGTGTGAACAATTTTTTTCTTGAGCTT----AGCTAGACGGGTTATTTTTGCCGT
AAAAAGATAGACGATTCATAATTTTTACTAGCTTTTTTTTATAGTAGTATTCATCTTTTTT----AGCTGAGATATTCAT
A-----TTTGTACACGTATTCTCTGATCCCGAACTGTTAAAAAAA-TAGCCGAACCACAGTAAAATGCATATACTCTGAA
ACCAATTCTTCAGATCAGACACCTCGCTCGTTCTGTTTCCCCAAATCCCCACACCCCACTCTTCACTCCCGTGGTAAGCT
AGGGTT----------CTCCTCGTCCCCCGGCGGCAGGATGGGCGGCGGCGCGGCGGGCCACGGCCAGGCCAGCGCTGCC
CCTCCCATGGATCCGGCCGTCCTTGAGCACCGGCGCGAGCC---CCGTGCTCGTGTGCTTCCGCCGCGACGCGGCCTGCA
GGAGACGGCAACGCTGCC---------GATCCCCGACGAGCTCGTGGCGGAGATCTTCCTCCTGCTGCCC---CCAACAG
ATCTGGTCCGCGCCTCCGCCGCCTGCGCCTCGTTCTACCGTCTCGTCGCCAGCCGCTCCTTCCTCCGGCGCTTCCGCAAG
CTCCACCCCCCGCCCCTCCTCGGCTTCCTCGATGACC---GAGTCTTCCACCCCGTAACCCCGCCTTATCCATCCGCGTC
CGCAGCCAACGCCGTCGCCCTCGCCGCCGACTTCTCCTTTTCCTTCCTACCCGGCCCCGCCCGTGACTGGGAGGTCCTGG
ACGTCCGCGACGGCCGCGTCCTCCTTAAGAGGCCCGGCCGGCAGCACCCCGAAA------TGGTGGTGTGTGACCCCTTG
TACCGGCGGTACCTCCTGCTTCCCCTGTTCCCCGACGACCTAGCCGCTTCATTGGAGGGCCCATCCGCGATAAAATGGCG
TGAATCCTTCCTCGTCCCAGCCGGCGACGAGGAGGCAGCAACTGCGGAAGAGACGTCATTCAGAGTTATCTGGATGGCGC
AGTGCAAATTCAGACTGTTCACCTTTGTCTTCTCCTCTCGCACTGGACAATGGGGAGCTGTTCCATCCCCGAGTTGGAGT
GATTTATTTGCTGGCTTGCCAAGTTTGGAGATGGCTACACCTCTCAACACACGCCAATATGCGTATGGCTGCTTTTACTG
GATGGCGGGTTACATGGCAGAAGCTAAAATGCTGGTGCTCGACACCTGGAGGATGGAGTTCTCCGTTGCTGAATCCCCAC
CTGATGGTTTCGCTATGGCCATGGTGGAGGCCGGGGAAGGCAGGGCTGGGGTGTTCGTGCATGCTCATGTGGGATCCAAG
TTCAGTTATAGCATTAGGCAAAATGATGGTGGGAGTTTGAGCCAGTGGCAGGAGAAGAAAACAGTATCATTGGGTTATGG
ATACTACATCATGGGTTCAACGGAGAGGTACTTGTTCTTGTATCAGCTGCAGAGCCCATTGCCTA-ATCCAGGCGTTTTC
ACGCTGGATGTCCAAACATTCCAGCTCGAGAGAGTGTGTGGTCAACACTTGGGCCACGCATATAGTAACTTCCCACCATC
GTTGTTGTTGTCACCGACAGTATGAAACGGTAAACTTCCTATCATATCCAGGTTATATCATTTTTATGGCACACTTGTTT
GATTCCTGACAGTTCATTATTGGGATTGACGACTCTTCTTTAAATGACTTGGTACTTAATTTTTCTGTTCTTTTGGCAAG
GTTAGCTCAGGAGCATAATTGTGATTTGTTTGTTTGTCCATTCTAATTGCCATTTTAAGCTTTTCAATCAAACAAGTAAA
AGAAAGGAAGGATCTTACACACTACGATAAGCATTCCTGAGGGGTCGTGAAATCATAAAGAAAACTGGATTGTAGCAA-T
ATTTTTGAGAAATGGTTTTTATGGTGAATTTTCACCTTTGGATTGTTTCACCTTGGAGATAGTCATTCTGGTCAGCGGGA
CTTGCAGCTACAAATTTATACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGATTCCACTATGGACTACATACGGAGC
AAAATGAGTGAATCTACACTCTAAAATATGTCTATATACATCCGTCTGTAGTTTGTAGTGGAATCTCTAAAAGACTTACA
TTTAGGAACGGAGGGAGTATCATGTGTTGGTTTGGCATAAATCTGCATAACTAATATTTTTGCAGCTTAGGTGCTGAGCC
ACACTGTTTGATCTCTTGTATATAATAATGATGCGAGGAAAACTGGAATGATGCTGATTAGTTTCTTAAGGAACCATTCC
AAATTTGTTTGCTCAATACACATGTCATTCATATATCAAGAAGAGCTTGCCATCTTGTGCTTAGAAAGTGAACCAGCTTG
TTGTCTACATAAATTGGAGGCAGTCCACCCACATTTTTTAGACAGTTAAAACTTT-------------------------
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---------------------------CACCAGCCCGCCTCCGCCGCCCACAGCGACGGGGATATGAGCCGGAGCCGCCT
TGCCGGCAAGGAGGAAGGGCGC------CGCAGTTGTCCACAGAGTCGCACGGGAGCAGAGAGCCAACAATCATTTTTGG
AAAGCGCTCTTAATCATCTTCTGACA-------GGACTTCATTTTCAGCTCTTCATGTTCACAGTTTTTGTCAGTTC--A
ACTGTTCTTCTGTAAAGACTGTAACTCAGAAAGAAATAACCAGGGAGGATATTACTATAATTTTGTGACCTTAGACTACA
AGTATATATGATTATTAGTTTGGGTTTTTT-CTTGGGGCCTACTGGATTGTTGTTTTGAGCGATCAAATGAACAGTTAAA
CTATTTCCAGTAGTTATTTTTTGTCAAAAAGAATTACTTTTTCAGATATTTCCGGACCTGTTGCTTGTTGCCCTGCCCTT
GCAAAAGTTAGCTAGCGTCTCT
>chr6A_2
-TGATCACCACACACAAGCCCACACACG----GTCTTGAGGTAGACGCCGAGAGGCGGGTGTGGGGAGATGTTGGTGAGC
AGTGGCCCAACGAGTGGGAAGATGCTGGTGACATGAAGGAGGGCGGCCGTGCGATCACATGGGACACAGGGGGGCT----
--GTATCGCCGAGGTAGGGCGCGTGCATAGAATGCCGACGAGGCGAGTGAGCGGTTGTCGCCGTGGCATGGTGGAGCTGG
GAATGGGGGTGGCGTGCCTCATCAAAGCGGGGTGCGAGGGCATGTGTTAGCAAGACATGTGAAGATGGGAGTGTGGTACC
TGGACGCGTGTAACAGGTTGGTGGAGAGGTGGGGGAGGGACGTGGGCCTTCATTCCTCACAGTGGGGAGCTTTGGGTGCC
ACCAAAGAGAAGGACGACGACACGGTTCGCGTGGGCATGGGCGAGAGGGAGGAGTCGCTCGAGAAAATCTTTTAGTGGGA
TTGGGTTTTAGCTACTCAAATTTGAGCAGTAGGTGCGCTTCTCAAATTCTTTTTTGAGCTT-AAAC------------CA
AGTACAATTTTTCATATTATTTGGATAGTGGTTTACTTATTCTTTTTAAATACAGAAATAGTCACCCTTCATATTGCTCG
AGTGGGTTGGGATCAGGCTTGGCATTTCCGAGGTCGGGCATTGCAAAGCCTGCCCCAAAACCCTGTCCGGCCTCGTCCTG
CTGTCCATGAGTTTTTTTTTAGCTTAGTGTGAACAAAATTTTTCTTGAGCTT----AGCTAGACAGGTTATTTTTGCCGT
AAAAAGATAGACGATTCATAATTTTTAGCT------TTTTTTATAGGTATTCATCTTTTTT----AGCCGAGATATTCAT
A-----TTTGTACACGTATTCTCTGATCCCGAACTGCTAAAAAAA-TAGCCGAGCCACAGTAAAATGCATATACTCTGAA
ACCAATTCTTCAGATCAGACACCTCGCTCGTTCTGTTTCCCCAAATCCCCACACCCCACTCTTCACTCCCGTGGTAAGCT
AGGGTT----------CTCCTCGT-CCCCGGCGGCAGGATGGGCGGCGGCGCGGCGGGCCAT-----------CGCCGCC
CCTCCCATGGATCCGGCCGTCCTTGAGCACCGGCGCGAGCC---CCGTGCTCGTCTGCTTCCGCCGCGGCACGGCCTGCA
GGAGACGGCAACGCTGCC---------GATCCCCAACGAGCTCGTGGCGGAGATCTTCCTCCGGCTGCCCACCCCAGCCG
ATCTGGTCCGCGCCTCCGCCGCCTGCGCCTCGTTCTACCGTCTCGTCGCCAGCCGCACCTTCCTCCGGCGTTTCCGCAAG
CTCCACCGCCCGCCCCTCCTCGGCTTCGTCGATGGCC---GAATCTTCCACCCCGTGATCCCGCCTTATCCTTCCGCCCC
CGCAGCCAACGCCGTCGCCCTCGCCGCCGACTTCTCCTTCTCCTTCCTACCCGGCCCCGCCCGCGACTGGGAGGTCCTGG
ACATCCGCGACGGCCGCGTCCTCCTTAAGAGGCCCGGCCGGCAGTACCATGAAA------TGGTGGTGTGTGACCCCTTG
TACCGGCGGTACCTCCTGCTTCCCCCATTCCCCGACGAGCAAGCCGCTTCATTGGAGGACCCATCCACGATAAAATGGTA
CGAAACCTTCCTTGTACCAGCCGGCGACGAGGAGGCAGCAACTGTGGAAGAGACGTCATTCAGAGTTATCTGGATGGCGC
AGTGCAAATTCAGACTGTTCACCTTTGTCTTCTCTTCTAGCACTGGACAATGGGGAGTTGTTCCATCCCCGAGTTGGAGT
GATTTATTTGCTGGCTTGCCAAGTTTGGAGATGGCTACACCTCTCAACACACGCCAGTATGCGTATGGCTGCTTTTACTG
GATGGCGGGCTACATGGCAGAAGCTAAAATGCTGGTGCTGGACACCCGGAGGATGGAGTTCTCCATTGCTGAACCCCCAC
CTGACGGTTTCGCTATGGCCATGGTGGAGGCTGGGGAAGGCAGGCCTGGGGTGTTCGTGAATCCTCATGGGGGATCCAAG
TTCCGTTATAGCACTATGCAAAATGATGGTGGGAGTTTGAGCCAGTGGCAGGAGGAGAAAACAATATCATTGGGTTATGG
GTACTACATCATTGGTTCAACGGAGAGGTACTTGTTCTTGTATCAGCTGCAGAGCCCATTACCTA-ATCCAGGTGTTTTC
ACGCTGGATGTCCAAACATTCCAGCTCGAGAGAGTGTGTGATCAACACTTGGGCCACGCATATAGCAACTTCCCACCATC
GTTGTTGTCGTCACCGACAGTATCAAGCGGTAAACTTCCTATCACATCCAGGTTATATCATTTTTATGACACACTAGTTT
GATTCCTGACAGTTCATTATTGAGATTGACAACTCTTATTTAAATGACTTGGTACTTAACTTCTCTGTTCTTTTGGAAAG
GTTAACTCAGAGGCATAATTGTGATTTGTTCGTTTGCCCATTCTAATTGCCATTTTAAGCTTTTCAATCAAACAAGTAAA
AGAAAGGAAGGATCTTACACACTATGATAAGCATTCCTGAGGGGTCGTGAAATCATAAAGAAAACTGGATTGTAGCAATT
ATTTTTGAGAAATGGTTTTCATGGTCAATTTTCACCTTTGGATTGTTTCACCTTGGAAACAGTCATTCTGGTCAGAGGGA
CTCGCACATGCAAATTTATA------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------TCATGTGTTGGTTTGGAATAAATCTGCATAACTACTATTTTTGCAGCTCAGATGCTGAGCC
ACACCGCTTGATCTCCTGTATATGATAATGATGCGAGGAAAACTGGAATGATGCTGATTAGTTTCTGAAGGAATCATTCT
AAATTTGTTTGCTCAATACTCACGTCATTCATATATCAAGAAGTGCTTGCCATCTTGTGCTTGGAAAGTGGACCAGCTTG
TTGTCTAAATAAATTGGAGGCAGTGCACCCACATTTTTCAGACGGTTCAAACTTTCACCTGCCTCTGTCTCAGATTCACA
GAGTCTTTCAAAGCACATGCCAGATGCGATCAATCATTTTTGTAGGATGGCCGAGGGCACCCGTAGTTTGTTGATTGTGG
CTACTGGGATCCCTGAGCTTTTCTTCCTTCAGTGACTGGAGTTAGAAATTTGTTATTCCATGCTAACTAATCAGTGTTGA
AATGGAACACAAAGATACTGATTTTTTTGTGGCTCAAGTTTTTCTAAGGATTCATTTCTACTACCTCTGTACCAAAATAT
AAGACATTTTTAGAGTTCAAATTGAACTGCAAATATGTCTTATATTTTGGTACGGAGGTAGTATATGTTTGCACTCCTTT
TTGCAAATGACAATATTAAAACATAAAAACGAGTGTTTGCTCTTACATATTTCAAATTCCGTTGTGGGTCAATATTGTAC
CAAGGGGAAATGGGTAAAAAAAACTTCAGATGGTTGATCCTCCATTTATTGTGTGGTTTGTCATAAGCCTTAACATTACA
GTTTACCCTGTGCTTGCTGCCTGATACTAAGACCTATTATTTGTTCTGCTTTCCTCGCAAGCTCTTGAATTTCGACAATT
TGAACATATTCAAACTTTGAGATGTTGTGCAGGTGTTGAGAAAGGGGTGGAATAGCGGGCGCTGGAACAAGGCTGCGCTG
TAAGCTCAAGCGCATAGCCGCCATGGTCAGAATAGTGTTGGTGTGAATGCTGGAGCCTGGAGGTCAGGCTAATGTTTTGG
AGGATTGAAGATGGTGCGAGGTTATCACGCAACTCAAAAGTTGGCCACTAAGTTGGTCCGCTTTGGTCCATAATATGGTC
ATCCAAGAATAGAACTTGGGAGTGTTCAGCTTGTGTGCCTTGTTTGATCTGACAATGATTGCTGCATTTGTCATGATAAG
GTGGTGATAGCATGGATGATGTTTAGTTTCTTCGTAATCATTAGGTTAACTAAGACTCTGTGAGAAGTCAAAGTAAATGT
TGGTCAGGTTGTATGTATGTCTACAACTCCAAGTTGGTGGAATGGAGTTTGTCAGGTGGTCAGGGTTAATAAGGAGATGA
CGAGGAGGATCCATCTGTTAATAATCTATTTGCAGTGCTGATCTACTCTTATCGTGATCTTTCCCATATGTCACTGAAGA
AAACAAAAAAGTTAGGCTGGAGATGAGATCGACGATAACCCCTGACGGGACTTCATTTTCAGCTCTTGATGTTTACAACC
TTTTGACAGTTTTAACTGTTCTTCTGCAAAGACTATACAGACCAGAAATAACCAGGGGAGGATATCACTGTAATTTTGTG
ACTCCGACTCCTCATCAGACAGCCCCGCACCAGCCCGCCTCCGCCGCCCACAGCGACGAGGATATGAGCCGGAGCCGCCT
TGCCGGCAAGGGGGAGCCGCGGTCGCCTCGCAGTCGTCCACAGAGTCGCACAGGAGCAGAGAGCCAACAGTCATTTCTGG
AAAGCACTCTTAATCATCCTCTGACGACTGACGGGACTTCATTTTCAGCTCTTCATGTTCACAGTTTTTGTCAGTAGTTA
ACTGTTCTTCTGTAAAGACTCCACAACTC--AGAAATAACCAGAGAGGATATCATTATAATTTTGTGACCTCAGACTACA
AG----TATGCTTATTATTTTGGGGTTTTTCCTTGGGGCCGCCTGGATTGTTGTTTTGAGCGATCAAACAAACAGCTAAA
CTATTTCCAGTAGTTGTTTTTTGTCAAAAAGAATAG-TTCTTCAGATAGTTCTGGAGCTATTGCTTGTTTGCCTGCCTTT
GCAAAAGTTAGCTAGCGTCTCT
>chr6B_455
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------------------------------------------------------TCGCTCAAGGGATTTTTTTACTGGGA
TTAGGCTTTTGCTGCTCAAATTTGAGCAGTTGGTGCACTTCTCAAATTCTTTTGAGCTAAACGTTTTACTAGATTGAGCA
AGAACAATTTATCACATTTATTCTGGAAGTGATTC---ATTTTTTTAAAATACAAAAATAGTTACTCTACATATTGTTGG
GTTGGGTTGGGACCAGGCTTGGCATTTT-GAGGTCGGGCATTGCAAAGCCCAGCCCAAAATCCTGTCTAC------CCTG
CTGTCCATGGGTTTTTCTTGAGCTTGGTGTGAACAAAGTTTTCTAAGAAAACTCCAAGCTAAACGACTTATTTTTCATA-
AAAAAAATAGACGATTCATAATTTTTTAGC------TTTTTTAGGGGTATTCATATATTTTTTTTAGCTGAGATGATTCA
TATTTTTTTGTTCAGGTATTCTCTGATCCCGAACTGCTAAAAGAAATAGCCGAGCCACAGCAAAATGCATATACTCTGAA
ACCAATTCTTCAGATCAGACACCTCGCTCTTCTTCTTCCCCCAAAT-------CCCCACTCTTCACTCCCGTCGTCAGCT
AGGGTTTCCGAGGTAGCTCCTCTTCCCCGGGCGGCAGGATGGGCGGCGGCGCGGCGGACCATGGCCAGGCCAGCGCTGCC
CCTCCCATCGATCCGGCCGTCCTTGAGCCCCGGCGCGAGCC---CCGTGCTCGTCTGCTTCCGCCGCGGCACGGCCTGCA
GGAGACGGCAACGCTGCC---------GATCCCCGACGAGCTCGTGGCGGAGATCTTCCTCCGGCTGCCC---CCAACCG
ATCTGGTCCGCGCCTCCGCCGCCTGCGCCTCGTTCTACCGTCTCATCGCCAGCCGCTCCTTCCTCCGTCGCTTCCGCAAG
CTCCACGCCCTGCCCCTCCTCGGATTCCTCGATCTCTCCGGGAAATTCTTCGGAGTGGCCCCGCCTTCTCCTTCAGCGTC
CGCGGCCCGCGCCGTCGCCCTCGCCGCCGACTTCTCCTTCTCCTTCCTACCCGGCCCCGCTCGGGACTGGAAGGTCCAGG
ACGTCCGCGGCGGCCGCGTTCTCCTCAACAGATCTCCCTTCGACAATCTCT------CCCTGGTGGTGTGCGACCCCCTG
CACCGGCGGTACCTCCTGCTTCCCC-------------------------------------------------------
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----------------------
>chr6D_1029
CCA-----------------------------------------------------------------------------
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---------------------------CCGGCGGCGGGATGGGCGGCGGCGCGGCGGACCAGGGCAAGACCAGAGAGGAC
CCTCGCGTAGATCCGGGCATCCTCGACCAACGTCGCCATTC---GTCTCCCCGTCTGCTGCCGTCGCGACATGGCTTCCA
AGAAATGGCCTCGCTGCC---------GATCCCCGACGAGCTCGTGGCGGAGATCTTCCTCCGGCTGCCCACGCCAGCCG
ACGTCATCCGCGCCTCTGGCGCCTGCGTATCCTTCCGTCGCCTCGTCGCCGGCCGCCCCTTCCTCCGGCGCTTCCGCAAG
CTCCACGACCCTCCCCTCCTCGGCTTCCTCGCTCTAACCGGAGCCTTCTTCCCCGTACTCCCGCCTTCTCCTTCCGCGTC
GGCAGCCAGCGCCGTCGCCCTCGCCGCCGACTTCTCCTTCTCCTTCCTACCCGTCCCCGCTCGGGACTGGAAGGTCCGGG
ACGCCCGCGGCGGCCGCGTCCTCCTCAGCAGATCTCCCTTGGATAATTCTCTGGC---------GGTGTGCGACCCCTTG
CACCGGCGGTACCTCCTGCTTCCCCTGATCCC------------------------------------------------
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----------------------
>chr6B_1029
CCA-----------------------------------------------------------------------------
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---------------------------CCGGCGGCGGGATGGGCGGCGGCGCGGCGGACGAGGGCCAGACCAGCGAGGAC
CCTCGCGTAGATCCGGGCATCCTCGACCAACGGCGCCGTTC---CTCTCCTCGTCTGCTGCCGTCGCGAGATGGCTTCCA
GGAAATGGCCTCGCTGCC---------GATCCCCGACGAGCTCGTGGCGGAGATCTTCCTCCGGCTGCCCACGCCAGGCG
ACGTCATCCGCACCTCTGGCGCCTGCGTCTCCTTCCGTCGCCTCGTCGCCGGCCGCCCCTTCCTCCGGCGCTTCCGCAAG
CTCCACGACCCTCCCCTCCTCGGCTTCCTCGCTCTAACCGGAGCCTTCTTCCCCGTACTCCCGCCTTCTCCTTCCGCGTC
GGCAGCCAGCGCCGTCGCCCTCGCCGCCGACTTCTCCTTCTCCTTCCTACCCGGCCCCGCTCGGGACTGGAAGGTCCGGG
ACGCCCGCGGCGGCCGCGTCCTCCTCAGCAGATCTCCCTTGGATAATTCTCTGGC---------GGTGTGCGACCCCTTG
CACCGGCGGTACCGCCTGCTTCCCCTGATCCC------------------------------------------------
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>chr6D_1039
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----------------------------------CAGGATGGGCGGCGGCGCGGCGGACCATGGCCAGGCCAGCGCCCAC
CCTCGCCCGGAACCGGCCGTCCCCGAGCACCGGCGCAAGAAGCGCCGTGCTCGTCTGCTTCCACGGCGCCACGGCGTCCA
GGAGATCCCCGACGAGCTCGTGGCGGAGATCCCCGACGAGCTCGTGGCGGAGATCTTCCTCCGGCGGCCCATCCTAGCCG
ATCTGGTCCGCGCCTCCCTCGCCTGCGTCTCCTTCCGAGGCCTCATCGCCGACCGCTACTTCCTCCGGCGCCTCCGCAAG
CTCCACGCCCCACCCGTCCTCGGGTTTCTTAACGGATACCGAGATTTCTTCCCCGTGATCCCGCCTTCTCCTTTCGCGTC
CGCAGCCAGCGCCGTCGCCCTCGCCGCCGACTTCTCCTTCTCCTTCCTGCCCG-CCCCGCCCGCGACTGGAAGATCCTGG
ACGTCCGCGATGGCCGCGTCCTCCTCAAGAGATCTCCCTCTAGCTGCCATAATCGTCCCCTGGTGGTGTGTGACCCCTTA
TACCGGCGGTACCTCCTGCTTCCCC-------------------------------------------------------
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>chr6D_1786
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-----ATATGCTGGCTTGTTAAGTGTGGAAACTGCGACACCTCTCTACTCACATCGATATGCGTGTGGCTGCTTTTACTG
GATGTCATATTTTATGTACGGAACTAAAATGTTGGTGCTCGACACCCATAGAATGGAGTTCTCCATTGCTAAAACCGCAC
CTGATGGTTTTGCTATGGCCATGGTGGAGGCTGGGCAAGGCGGGCCTGGGGTGTTCATGCTTCATTATGGGGGATCCAAG
CTCAATTATAGCATTAGGCAAAACGATGGTGCGAGTTTGAGCCAGTGGCTAGAGGAGAAAACAATCTCATTGGGTTATGG
GTGCTACATCATAGGTTCAACGGAGAGGTACTTCCTCTTGTATCAGCTGCGAAGCCCGTTGCCCCGATCGAGGCGTTTTC
ATGCTGGACGTCCGAACATTTCAGCTTGAGAGACTGTCTGGTCAACGGTTGGGCCGCACATATAGTAACTTCCCACTGTC
GTTGTTGTCGTCACCGACAGTATCAGGCGGTAAGCTTTCTATCACATCCAGGTTATATGATTTTTATGACATGCTTG-TT
GATTCCTGACAGTGCATTATTGGGATTG-CAACTTTTCTTTAAGCGACTTGGTACTTAACTTTTATGTGCTTTTGGCAAG
GTTAGCTCAGTAGCATAATTGTTATTTGCTTGTTTGTCCATTCTAATTGCCATTTAAAACTTTTT----AAACAAGTAAA
AGAAAGGAAGGATCTTACACGCTATGATTAGCATTCTTGAGGGGTCGTGAAATCATAAAGAAAACTGGATTGTAGCAATT
ATTTTCGAGAAATGGTTTTTATGATTAATTT-------------------------------------------------
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>SNPs
S---------------S-----------SSSS------------------------------------------------
------S-------S--------------------S-------S--S--S-----------------S-----SSSSSSS
SS--------------------S------S----------------------S-S---S--------S-----------S
--S----------------------------------------------------------S--------S-------SS
S----S-----------------------------------S-------S------------S-----------------
-----------------------------------------S----S---S--------------------------S--
---------S------------------------------------------------S--S--S---------------
----------S----------S---S----S----------------------S--------------------------
-------------------S--------------------------------------------------S--S----S-
------------------------------------SS------------------------------------------
---------------------------SSSSSSSSS----S---SS----------------------------------
------------------------------------S----------------S--------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
------------------------------------------------------S---------------S---------
--------------------------------------------------------------S---------------S-
--------------------------------------------------------------------------------
----------------------------------S------------------------------------S--------
---------------------------------------S-----------------------S----------------
--------------------------------------------S-----------------------------------
--------------------------------------S-S-----------------S-------S-----------SS
S---S-------S--S----------------------------S-----------------------------------
----------------------------------S---S------------------S----------------------
--------------------------------------------------------------------------------
----------------------------------------------S-----------------S--------S------
-------------------------------S------------S-----------------S------S----------
------------------------------------------------------S--------S----------------
S-----------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S--------------S--S-----------------S-----------------------S-----------
------------------------------S----------------------------S--------------------
----------S---------------------------------------------------------------------
------------------------S-------------------------------------------------------
-------------------------S-------------------------------S-S---------------S----
--S---SS-S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS----------------S-----------------S-------------S--S---------
----S-S--------S-------S------------------------------------------S------S-----S
-------------------S--S--------------------S------------------S-------S---------
-------S----------------S-------------S----S---S--------------------------------
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----------------------------------------------------------S---------------------
-----------S---SSS---S------------S----------------S-----------------S------S---
-----S------------S------S-------------------------------------------------SS---
--------------------SS-SSS-SSSS------------S--------S-S----------------S--------
--SSSS----S------S------S---------------SS--------------------------SS-----S----
---------------S------------------SSS--S--------S---S---S--S---------SS------S--
----------------------
>forward_660
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
ATTGGGTTGGGATCAGGCTG------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_1985
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GTTGCTGAATCCCCAC
CTGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>forward_714
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CCAAAACCCTGTCCGGTCTT------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
>reverse_2700
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------TAGTCATTCTGGTCAGCGGG-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------
