>input_sequence_47957
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------ATGCTCCCTCTGTTGCTCCAATATATCCACACACGAGCTAGCCTACCATCACCACCAG---CAGC
ATCAGCAACAGCGGCAGAGTGCTCCCCTCTTCCTCAGCTTACCTGCGTCCCATTAATTAAAGGTACGCGCCATTTGGTCG
ATGCGCTCATCTGTGCATATGCATGTTGCTGGGTCGGTAGTTGCATGTGCTTCATCATCGGATCGGCCTCACACAGATCA
GAGCCTCGCTAGC----TACTTGGATGTATAGCTCATATCCGATTTCTTATTAGTAGGTGCTGGCAAGATGGATCCTGGC
TTCTGCAACGACATGATCCTAAGCGAGAGCGCGTGGAACAGCGGCGGTGGAGACGGTGGCGCGGCCGGTGATGTCGTTCA
TGTCGTGGACGGGAGCGGCATGACGGTGCTGGAGAGGCTGGTGCTGGACGAGGCGCTCGCCGCCGCGATCATGGAACTGC
AGGGCATCCAGGTGCCGTGCGGAGGTGGCAAGCCCATGGCCGGCGGCCTCGAGGCGGCCAGCCTCGCATTCGGCGCTACG
GGGACAGGACCCGTCACGCCTGCCTACGCTGAGGTTGACGGGGTTGTCCTGCAGCGACAGCAGCATCAACATCGCCATCA
GGGCGTGATGGGGATGCCTGCCGACTACGACCTCGTACCAGCAGCACGAGCTGTCACGTTGGCTACTGTACCTGCGGCAC
CTTCCTTCCCAAAAGGCGCGGCTGCCGCCGTTGACCGCGCCGGCGTCGTCGATGCGGCGGTCTTTGACTCCGGCAATAAC
GGGCCCACATCGGCGGCAAAAACAGGGACGACGAGGCAGTGGGACGAAGCCAACGGTGGTGCCAAAAGGCAACGCCGGTC
AAGTAGAAAGAGGAGGGCCGCCGATGCACCATGCCCAGCCGCCGACGGGCACTCGCAG------GAGAACCCTCTCTGCA
GCATCCTCGCGTCCACCAACACCGGGGATGGCGGCATCCAGATTGCGTTCAGCAGCGGCGGCGGTGCTGCGTCGTCCTCC
AAGCGCACCAAGCCGTCGCTGAGCAGCACCTCGTCCAGCATCAGCTTTGACGGCAGAAGCTCCGTCAACAACGGCTGCGA
CGACGTCCCCCGGTACGAACCGGACACGGAGGCCCTGGCGCAGGTGAAGGAGATGATCTATCGCGCGGCGGCGATGCGGC
CGGTGAGCCTCGGCGTCGAGGAGGAAGACACCGGCGAGCGGCCAAGCAGGCGCAACGTGCGCATATCGTCCGACCCGCAG
ACGGTGGCGGCGCGCCAGCGGCGGGAGCGCATCAGCGAGCGGCTGCGCGTGCTGCAGAAGCTCGTCCCGGGAGGCGCCAA
GATGGACACGGCCTCCATGCTGGACGAGGCCGCCAACTACCTCCGCTTCCTCAAGTCCCAGATCAGGGAGCTGCAAACCC
TAGACCGCCGGAATTACGGCGCTAATGCCATATCGAACACAGGCATGGCGCCACTGATGAGCTACAACAACATGCCGGCC
TTCGCCTTCCCGGCGACAGGAGCCAGCGAAACCCTAGGAGGAGGAG---GAGAGGAGGCTTTCATGAGCAGCCGGTTTAG
ATAG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>chr3D_1_TraesCS3D01G208500
CACGTCGCCGGGTACGACTCCTTCCTGGCCAATGCCTTGCCGGCGCCCTGGTCCTCGCTACGCTCAGACTAGCCACAATG
GGTAGTAACATAGAGTAGTAACATGCCCATGTTACTACTCTATGTTACTACCTCTATAGTGGGGAGTAACATATGTGTGG
TAACATGCAACGCTTCATTTATTAGGCTATAAACTCATCTTGTATTGATATGTGTGATGTTACTCATACTAGTAGTAACT
AGCTATGTTACCATATGCCTCTCTTTCTTCATTTATTGCTTGTCACATTATCTATTTTATCTAAATATGTGTGATGTTAC
TATCTATGTTACTCCCAGTGTGGGTAGTCTCACCGCATGCTTCCTTGTGACTGACCCGAATTCTAAAACCCGGCAACTTA
CCCCTAGATAAATTTTGAAATTACTGATGTACCGG------TAGTACTTGTATAATTGAGCCCTACCCCCTACCTACACA
GCCCAAGGCATATGAGAAGAGAGCAGTACCCTGCTATCCGGTAAGTACTAAAAGCCCTAGGCATGTTAGCAAGCT--TAT
ATTTCAGAACCCACACAATCAAGAGCATTAATATGGTAGGCATACCATAGTGAGTGATAATAGGCAGTAGCTAGCTGTGC
TGTGGGTATAG-------CTAGATGTGTGCATCGCTGCACTGCACACACAGTGTGTCAAGCGTGAGGACCATCGATGAGG
TAGTGTGCTGTGTAGTAACAAGTACTACTAC-----------------------------------TATACAAGTGTATG
TACTAGACAGTACAGTACACCACCATAGG-CATAGGTGCAACCATGCATCTATTCTTTGGCCTGCCTCTTTATAAGAGCC
TGCTTGCTTTCCCCTCCGGCCTGCAGCCTTTTGCTAGAGAGAGCACACCACACACACACACACACGCTGCGCGCAGGCAG
G----GCCCTAAAAGTAGCTTCAACACTGCAGGCATCTTGTCTTATTGCGCCATTAGCATCTTCCTCCTCCAGCGAGCTA
GCGTTTAATGCGCAAATGCTCCCTCTGTTGCTCCAATATATCCACACACGAGCTAGCCTACCATCACCACCAG---CAGC
ATCAGCAACAGCGGCAGAGTGCTCCCCTCTTCCTCAGCTTACCTGCGTCCCATTAATTAAAGGTACGCGCCATTTGGTCG
ATGCGCTCATCTGTGCATATGCATGTTGCTGGGTCGGTAGTTGCATGTGCTTCATCATCGGATCGGCCTCACACAGATCA
GAGCCTCGCTAGC----TACTTGGATGTATAGCTCATATCCGATTTCTTATTAGTAGGTGCTGGCAAGATGGATCCTGGC
TTCTGCAACGACATGATCCTAAGCGAGAGCGCGTGGAACAGCGGCGGTGGAGACGGTGGCGCGGCCGGTGATGTCGTTCA
TGTCGTGGACGGGAGCGGCATGACGGTGCTGGAGAGGCTGGTGCTGGACGAGGCGCTCGCCGCCGCGATCATGGAACTGC
AGGGCATCCAGGTGCCGTGCGGAGGTGGCAAGCCCATGGCCGGCGGCCTCGAGGCGGCCAGCCTCGCATTCGGCGCTACG
GGGACAGGACCCGTCACGCCTGCCTACGCTGAGGTTGACGGGGTTGTCCTGCAGCGACAGCAGCATCAACATCGCCATCA
GGGCGTGATGGGGATGCCTGCCGACTACGACCTCGTACCAGCAGCACGAGCTGTCACGTTGGCTACTGTACCTGCGGCAC
CTTCCTTCCCAAAAGGCGCGGCTGCCGCCGTTGACCGCGCCGGCGTCGTCGATGCGGCGGTCTTTGACTCCGGCAATAAC
GGGCCCACATCGGCGGCAAAAACAGGGACGACGAGGCAGTGGGACGAAGCCAACGGTGGTGCCAAAAGGCAACGCCGGTC
AAGTAGAAAGAGGAGGGCCGCCGATGCACCATGCCCAGCCGCCGACGGGCACTCGCAG------GAGAACCCTCTCTGCA
GCATCCTCGCGTCCACCAACACCGGGGATGGCGGCATCCAGATTGCGTTCAGCAGCGGCGGCGGTGCTGCGTCGTCCTCC
AAGCGCACCAAGCCGTCGCTGAGCAGCACCTCGTCCAGCATCAGCTTTGACGGCAGAAGCTCCGTCAACAACGGCTGCGA
CGACGTCCCCCGGTACGAACCGGACACGGAGGCCCTGGCGCAGGTGAAGGAGATGATCTATCGCGCGGCGGCGATGCGGC
CGGTGAGCCTCGGCGTCGAGGAGGAAGACACCGGCGAGCGGCCAAGCAGGCGCAACGTGCGCATATCGTCCGACCCGCAG
ACGGTGGCGGCGCGCCAGCGGCGGGAGCGCATCAGCGAGCGGCTGCGCGTGCTGCAGAAGCTCGTCCCGGGAGGCGCCAA
GATGGACACGGCCTCCATGCTGGACGAGGCCGCCAACTACCTCCGCTTCCTCAAGTCCCAGATCAGGGAGCTGCAAACCC
TAGACCGCCGGAATTACGGCGCTAATGCCATATCGAACACAGGCATGGCGCCACTGATGAGCTACAACAACATGCCGGCC
TTCGCCTTCCCGGCGACAGGAGCCAGCGAAACCCTAGGAGGAGGAG---GAGAGGAGGCTTTCATGAGCAGCCGGTTTAG
ATAGATTATTGATGAGGGACATGCACGTACGCAAGTGTTTTCATGTGTTGTGCCCAATGTAAGACCATGCATCGATCAGA
AGATAGATCGATCCATCATCATTAGCTACTGATTAGGGATGATCATGTCGATCGATGAAATTAATCATGATGTCGTCGTC
TTCACCTTTC------TTCTTCTTCTTCTTCTCCTTCTCCTTCTGTTAGATTGAT----GAATAATTCTGCATGCATGCA
TCCGGCCTGTACGTGCTTTTACAAATTTTATTAGAGACTCTTTGGGCGAGCAGCAGAAAAGGAGCGAGGGCTTGGAAAGT
TTTTTGCTCCTCCT-TTGATCAGTTTAATTAGTCGTCGTCGTCTCCATCTTTTCATGTGGCAAGCATGTAGACGCGTGAA
AGCAAAAGCTTTTCCAGCGGGCGTGTGTGCTTTCTAAGTTCCGATCCATATGGTAATGGAGTAGCAGCAGCTCCAAACAT
CATCATGACAACTTTCTAAGGCGTAATTATGGCCTCTTTGAAAGAGAAATGCC-TTTCTTTGTGCATGCAAAACCCTACC
GAAAAGGGCCGGGATCGATCGAGGAGGAAGGAAGAAGAGAGGGCAAAAATCATGGCTTCATCATTGCACACTTTCTGGTC
GTCGTCGTCGTCGT---TGCTAGGGAAGCAAAGCAGAGGGAAAGAAAGCATGCAATGCATGGTTAATTCTAAAACTGTTT
GAGTTGTATATGATCGAGGAGACGTGTGGTGTCGTGC------CGATGCCGATGCCG------ATGGTTCGTGCAGTGTT
TGAGCCCACTCGGCCGGGTCAGGTTTCAGGCTTGGGCTGGGTGAGCTTTTTAGACGGCCGGGGTCAGGCACTCGCTGCAT
CAAAAGGCATGCGTCTAAAAGGAATCATTCCCTTTCCCTTTTGATTCAAAAATGCACGCCTTTTGGTCCTCGGGCTGCGT
GTCAAAATTCTTGATGAGATGCTGTCGTAACCTTTGAATCTTGATGAGATTTTTTTTCTCTCGAATACTAC
>chr3A_355
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GCATGCTTCCTTCTGACTGACCCAAATTGTAAAACCCGGCAACTTA
CCTCTAGATAAATTTTGAAATAACTAATGTACCAGTAGTACTAGTACTTGTATAATTGAGCGCTATCCCCTACCTACACA
ACCCTAGGCATATGAGAAGAGAGCAGTACCCTGCTATCCGGTAAGTACTAAAAGCTCTAGGCATGTTAGCAAGCT--TAT
ATTTCAGAACCCACACAATCAAGAGCATTAATATGACAGGCATACCATAGTGAGTGATAATAGGCAGTAGCTAGCTGTGC
TGTGGCTATAGCTAGAGCCTAGATGTGTGCATCGCTGCACTGCACACACAGTGTGTCAAGCGTGAGGACCATCGATGAGG
TAGTGTGCTGTGTAGTGTGTACTAGTAGTAAAAGGTATACAACTGTGTGTACTA--------------------------
-ACTAGACAGTACAGTATACCACCATAGC-CATAGG-----C----CATCTATTCTTTGGCCTGCCTCTTTATAAGAGCC
TGCTTGCTTTCCCCTCCGGCCTGCAGCCTTTTGCTAGAGAGAGCACAC--CACACACACACACACGCTGCGC----GCAG
G----GCCCTAAAAGTAGCTTCAACACTGCAGGCATCTTGTCTTATTGCGCCATTAGCATCTTCCTCCTCGAGTGAGCTA
GCGTTTAATGCGCGAATGCTCCCTCTGTTGCA---------------ACGAGCTAGCCTACCATCACCACCACCACCAGC
AGCAGCAACAGCGGCAGAGTGCTCCCCTCTTCCTCAGCTTACTTGCGTCCCATTAATTAAAGGTACGCGCCATTTGATCG
ATGCGCTCATCTGTGCATATGCATGTTGCTGGGTCGGTAGTTGCATGTGCTTCGTCA---GATCGGCCTCAGACAGATCA
GAGCCTCGCTAGC----TACTTGGATGTATAGCTCATATCCGATTTCTTATTAGTAGGTG---GCAAGATGGATCCTGGC
TTCTGCAACGACATGATCCTAAGCGAGAGCGCGTGGAACAGCGGCGGTGGAGACGGTGGCGCGGCCGGTGATGTCGTTAA
TGTTGTGGACGGGAGCGGCATGACGGTGCTGGAGAGGCTGGTGCTGGACGAGGCGCTCGCGGCCGCGATCATGGAGCTGC
AAGGCATCCAGGTGCCGTGCGCAGGTGGCAAGCCGATGGCCGGCGGCCTCGAGGCGGCCAGCCTCGCATTCGGCGCTACG
GGGACGGCACCCGTCACGCCTGCCTACGCTGAGGTTGACGGGGTTGTCTTGCAGCGACAGCAGCATCAACATCGCCATCA
GGGCGTGATGGGGATGCCTGTCGACTACGACCTCGTACCAGCAGCACGAGCTGTCACGTTGGCTACTGTACCTGCGGCAC
CTTCCTTCCCAAAAGGCGCGGCT---------------GCCGGCGTCGTCGATGCGGCGGCCTTTGACTCCGGCAATAAC
GCGCTGACATCGGCGGTAACAGCAGGGACGACGAGGCAGTGTGACGAAGCCAACGGTGGTGCCAAAAGGCAACTCCGGTC
AAGTAGAAAGAGGAGGGCCGCCGATGCACCATGCCCGGCCGCCGACGGGCACCCGCAGTCGCAGGAGAACCCTCTCTGCA
GCCTCCTCGCGTACACCAACACCGGAGATGGCGGCATCCAGATTGCGTTCAGCGGCGGCGGCGGTGCTGCGCCGTCCTCC
AAGCGCACCAAGCCGTCGCTGAGCAGCACCTCGTCCAGCATCAGCTTTGACGGCAGAAGTTCCGTCAACAACGGCTGCGA
CGACGTCCCCCGGTACGAACCGGACACGGAGGCCCTGGCGCAGGTGAAGGAGATGATCTATCGCGCGGCGGCGATGCGGC
CGGTGAGCCTCGGCGTCGAGGAGGAAGACACCGGCGAGCGGCCAAGCAGGCGCAACGTGCGCATCTCGTCCGACCCGCAG
ACGGTGGCGGCGCGCCAGCGGCGGGAGCGCATCAGCGAGCGGCTGCGCGTGCTGCAGAAGCTCGTCCCGGGAGGCGCCAA
GATGGACACGGCCTCCATGCTGGACGAGGCCGCCAACTACCTCCGCTTCCTCAAGTCGCAGCTCAGGGAGCTGCAAACCC
TAGACCGCCGGAATTACGGCGCTAATGCCATATCGAACACAGGCATGGCGCCACTGATGAGCTACAACAACATGCCGGCC
TTCGCCTTCCCGGCGACAGGAGCCGGCGAAACCCTAGGAGGAGGAGGAGGAGAGGAGGCTTTCATGAGCAGCCGGTTTAG
ATAGATTATTGATGAGGGACATGCACGTACGCAAGTGTTTTCATGTGTTGTGCCCAATGTAAGACCATGCATCGATCAGA
AGATAGATCGATCCATCATCATTAGCTACTGATTAGGGATGATCATGTCAATCGATGAAATTAATCATGATGTCATCGTC
TTCACCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGT----TTGAT----GAATAATTCTGCATGCATGCA
TCCGGCCTGTACGTGCTTTTACAAATTTTATTAGAGACTCTTTGGGCGAGCAGCAGAAAAGGAGCGAGAGCTTGGAAAGT
TTTTTGCTCCTCCTTTTGATCAGTTTAATTAGTCTTCGTCGTCTCCATCTTTTCATGTGGCAAGCATGTAGACGCGTGAA
AGCAAA-GCTTTTCCAGCGGGCGTGTGTGCTTTATAAGTTCCGATCCATATGGTAATGGAGTAGCAGCAGCTCCAAACAT
CATCATGACAACTTTCTAAGTCGTAATTATGGCCTCTTTGAAAGAGAAAGGCCTTTTCTTTGTGCATGCAAAACCCTACC
GAAAAGGGCCGGGATCGATCGAGGAGAAAGGAAGAAGAGAGGGCAAAAATCATGGCTTCATCATTGCACACTTTCTGGTC
GTCGTCGTCGTCGTCGTTGCTAGGGAAGCAAAGCAGAGGGAAAGAAAGCATGCAATGCATGGTTAATC----AACTGTTT
GAGTTGT--ATGATCGAGGAGACGTGTGGTGTCGTGG------CGATGCCGATGCCGATGCCGATGGTTCGTGCAGTGTT
TCAGCCCACTCGGCCGGGTCAGGTTTCAGGCTTGGGCTGGGTGAGCTTTTTAGACGGCCGGGTTCAGGCACTCGCTGCAT
CAAAAGGCATGCGTCTAAAAGGAATCATTCCCTTTCCCTTTTGATTCAAAAATGCACGCCTTTTGGTCCTCGGGTTGTGT
GTCAAAATTCTCGATGAGATGCTGTCGTAACCTCTGAATCTTGGTGAGATTT-------------------
>chr3B_355
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GCATGCTTCCTTCTGACTGACCCAAATTCTAAAACCCGGCAACTTA
CCTCTAGATAAAATTTTAAATTACTGATGTACTGG------TAGTACTTGTATAACTGAGCCCTACCCCCTGCCTACACA
GCCCAAGGCATATGAGAAGAGAGCAGTACCCTGCTATCCGGTAAGTACTAAAAGCCCTAGGCATGTTAGCAAGCTTATAT
ATTTCAGAACCCACACAATCAAGAGCATTAATATGATAGGCATACCATAGTGAGTGATAATAGGCAGTAGCTAGCTGTGG
C-----TATAG-------CTAGATGTGTGCATCGTTGCACTGCACACACAGTGTGTCAAGCGTGAGGACCATCGATGAGG
TAGTCTGCTGTGTAGTGTGTACTAGTAGTAACAAGTATACAAGTGTATGTTTGGCAAAAAAAAAAGTATACAAGTGTATG
TACTAGACAGTACAGTACACCACCATAAGCCATAGGTGCAAC----CATCTATTCTTTGGCCTGCCTCTTTATAAGAGCC
TGCTTGCTTTCCCCTCCGGCCTGCAGCCTTTTGCTAGAGAGAGCACAC--CACACACACACACACGCTGCGC----GCAG
GCAGGGCCCTAAAAGTAGCTTCAACACTGCAGGCATCTTGTCTTATTGCGCCATTAGCATCTTCCTCCTCCAGCGAGCTA
GCGTTTAATGCGCGAATGCTCCCTCTGTTGCTCCAATATATCAACACACGAGCCAGCCTACCATCACCACCAC-------
--------CAGCGGCAGAGTGCTCCCCTCTTCCTCAGCTTACTTGCGTCCCATTAATTAAAGGTACGCGCCATTTGATCG
ATGCGCTCATCTGTGCATATGCATGTTGCTGGGTCGGTAGTTGCATGCGCTTCATCG---GATCGGCCTCAGACAGATCA
GAGCCTCGCTATCTACGTACTTGGATATATAGCTCATACCCGATTTCTTATTAGTAGGTG---GCAAGATGGATCCTGGC
TTCTGCAACGACATGATCCTAAGCGAGAGCGCGTGGAACAGCGGCGGTGGAGACGGTGGCGCGGCCGGTGATGTCGTTAA
TGTTGTGGACGGGAGCGGCATGTCGGTGCTGGAGAGGCTGGTGCTGGACGAGGCGCTCGCGGCCGCGATCATGGAGCTGC
AGGGCATCCAGGTGCCGTGCGGAGGTGGCAAGCCGATGGCCGGCGGCATCGAGGCGGCCAGCCTCGCATTCGGCGCTACG
GGAACGGGACCCGTCACGCCTGCCTACGCTGAGGTTGACGGGGTTGTCCTGCAGCGACAGCAGCATCAACATCGCCATCA
GGGCGTGATGGGGATGCCTGTCGACTACGACCTCGTACCAGCAGCACGAGCTGTCACGTTGGCTACTGTACCTGCGGCAC
CTTCCTTCCCAAAAGGCGCGGCTGCCGCCGTTGACCGCGCCGGCGTCGCCGATGCGGCGGTCTTTGACTCCGGCAATAAC
GCGCCGGCATCGGCGGTAATAGCAGGGATGACGAGGCAGTGGGACGAAGCCAACGGTTGTGCCAAAAGGCAACGCCGGTC
AAGTAGAAAGAGGAGGGCCGCCGATGCACCATGCCCGGCCGCCGACGGGCACTCGCAG------GAGAACCCTCTCTGCA
GCCTCCTCGCGTCCACCAACACCGGGGATCGCGGCATTCAGATTGCGTTCAGCAGCGGCGGCGGTGCTGCGCCGTCCTCC
AAGCGCACCAAGCCGTCGCTGAGCAGTACCTCGTCCAGCATCAGCTTTGACGGCAGAAGCTCCGTCAACAACGGCTGCGA
CGACGTCCCCCAGTACGAACCGGACACGGAGGCCCTGGCGCAGGTGAAGGAGATGATCTACCGCGCGGCGGCGATGCGGC
CGTTGAGCCTCGGCGCCGAGGAGGAAGACACCGGCGAGCGGCCAAGCAGGCGCAACGTGCGCATCTCGTCCGACCCGCAG
ACGGTGGCGGCGCGCCAGCGGCGGGAACGCATCAGCGAGCGGCTGCGCGTGCTGCAGAAGCTCGTCCCGGGAGGCGCCAA
GATGGACACGGCCTCCATGCTGGACGAGGCCGCCAACTACCTCCGCTTCCTCAAGTCACAGATCAGGGAGCTGCAAACCC
TGGACCGCCGGAATTACGGCGCAAATGCCATATCGAACACAGGCATGGCGCCAATGATGAGCTACAACAATATGCCGGCC
TTCGCCTTCCCGGCGACAGGAGCCGGCGAAACCCTAGGAAGAGGAG---GAGAGGAGGCTTTCATAAGCAGCCGGTTTAG
ATAGATTATTGATGAGGGACATGCACGTACGCAAGTGTTTTCATGTGTTGTGCCCAATGTAAGACCATGCATCGATCAGA
AGATAGATCGATCCATCATCATTAGCTACTGATTAGGGATGATCATGTCGGTCGATGAAATTAATCATAATGTCGTCGTC
TTCACCTTTT---TTCTTCTTCTTCTTCTTCTTCTTCTCCTTCTGT----TTGATTGATGAATAATTTTGCATGCATGCA
TCCGGC---TACGTGCTTTTACAAATTTTATTAGAGACTCTATGAGCGAGCAGCAGAAAAGGAGCGATGGCTTGGAAAGT
TTTTTGCTCCTCCTTTTGATCAGTTTAATTAGTCGTCGTTGTCTCCATCTTTTCATGTGGCAAGCATGTAGACGCGTGAA
-GCAAA-GCTTTTCCAGCGGGCGTGTGTGCTTTCTAAGTTCCGA---------------------------TCCAAACAT
CATCATGACAACTTTCTAAGTCGTAATTATGGCCTCTTTGAAAGAGAAAGGCCTTTTCTTTGTGCATGCAAAACCCTACC
GAAAAGGGCCGAGATCGATCGAGGAGAAAGGAAGAAGAGAGGGCAAAAATCATGGCTTAATCATTGCACACTTTCTGGTC
GTCGTCGTCGTCGTCGTAGCTAGGGAAGCAATACAGAGGGAAAGAAAGCATGCAATGCATGGTTAATC----AACTGTTT
GAGTTGTA-ATGATCGAGGAGACGTGTGGTGTCGTGGCAATGCCGATGCCGATGCCGATGCCGATGGTTCGTGCAGTGTT
TGAGCCCACTCGGCCGGGTCAGGTTTCAGGCTTGGGCTGGGTGAGCTTTTTAGACGGCCGGGGTCAGGCACTCGCTGCAT
CAAAAGGCATGCGTCTAAAAGGAATCATTCCCTTTCCCTTTTGATTCAAAAATGCACGCCTTTTGGTCCTCGAGCTGCGT
GTCAAAATTCTTGATGAGATGCTGTCGTA------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S----------S----------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
-----S--------------------------------------------------------------------------
----------------SSSS-S--S--S--S-------------------------------------------------
------------------------------------------SSSS----------------------------------
------------------------------------------------SS----------------------SSSS----
--------------------------------------------------------------------------------
-------------S----------------------------S-----------------------------S-------
-S----------------------------------------S---------------------------------S---
---------------------------------------------------------SSS-----------S--------
------------------------------------------------------------SSS-----------------
------------------------------------------------------------------------------S-
---S--------------------------------------------------------S--------------S----
----------------------------------S---------------------------------------------
-----S--------------------------------------------------------------------------
--------------------S-----------------------------------------------------------
--------------------------------------------------------------------------------
-S---S----------S--S-S----------------------------------------------------------
------------------------------------S-------------------------------------------
--S--------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-------------SSSS------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S-------------------------------------------------------------------------
--------------------S----------------------------S------------------------------
--------------------------S-----------------------------------------------------
-------------------------------------------------------------------SSSSS--------
--------S---------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S---------S--------SSSSSSSSSSSSSSSSSSS
>forward_73
-----------------------------------------------------CTCGCTACGCTCAGACTAGC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_1343
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------GGCAAGATGGATCCTGGC
TT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_76
--------------------------------------------------------GCTACGCTCAGACTAGCCAC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_1857
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------CAAAAACAGGGACGACGAGG--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_646
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GTAGCTAGCTGTGC
TGTGGG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_2458
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------CCAGATCAGGGAGCTGCAAA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_1272
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------CATCATCGGATCGGCCTCAC--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_2585
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------AGCGAAACCCTAGGAGGAGG------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>forward_1444
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------CCGGTGATGTCGTTCA
TGTC----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
>reverse_3170
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TGCCTTTCTTTGTGCATGCA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------
