>input_sequence_47882
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-------------------------------------------------------------ATGTCATCGGCGGTGGAGG
CGGAGGCGGAGGTGGTCATCGTGGGCGCCGGGATCGCGCGCAGGGCTGGCGACCGCGCTGGCTATGCGTCGGACCGGCGT
GCG---------CGGCGGTGTTCTGGTCCTGGAGCGGCACGATGAGCTGCGCGCCACAGGCGCCGCGCTCACCATCTTCC
CTAGCGGCTGGTTCGCGCTGCGCGCGCTGGGCGT-GCGCACAAGCTCATGTCCGGCTACGACGCCTATGAAACGTGCGTC
GTTAGTTAGTAGTACAGT------------AGTATATGTCAACAAGAGAAAACAAAATTACGTACTTCGAGTCGATTCTC
TTGCTGCATGCAGATTTCAGGTGACCAATCTTGAAAATGGAGCAACTCAGGTGTTTCGCTTCGCTGGGCGCGAAAACAGG
TCTGTTGGTGAA-----------------GCAAATTTTCTGTTGGATTATTCATTAATCCGATCCCAATTAAATCTGATC
AATTTGGCTAAACCGATG---GATGCAAAAATGAAGCGGTGAAATCAAGGCGAGGCCGGCGGATCGAAAGGCGCTGCTGG
AAGCGCTCGCGGAGGAGCTCCCGCCGGGCACCATCCGCTTCTCGTCCAAGCTCGTCTCCATCGACAGTGAGACTACAGCC
GAGGAGGAGGGTTCGCCGGAGACCTCCGTTCTACGGTTAGACGACGGCACAGTGATCCGAGCCAAGGTAATCGACCAAGC
CAC----AATTAATTGTAGTAGTGCGCATCTGCACGTACTCC----TAGCCTAAGTCGTCTTGTCTTGTAAACGTCGTCC
AATCCACCAT---------CAGGTGGTGATCGGGTGCGACGGGGTGCACTCGGTGGTGGCGCGGTGGCTAGGCCTGTCGG
AGCCGGTGACATGCGGCCGGTCCGCCGTCCGCGGCCTCGCCGTCTACCCGGACGGCCACGGCATGAAGAGGGAGCTCCGG
CAGTTCCTCTCGGCGGGCCTGAGGGCCAGCAAGGTGCCCATCAGCGAGACGGAGGTCTACTGGTTCCTCGTCAACAACAC
CGTCGCCGCGGCAGAGGAAGAAGCCGGCGCGGACCCGGCCAAGAGCCCAAGATCCTGCGGGAGGTGACCAACAACCTGGG
GAGGCACATGCCGGCGGAGTACCTGGACGTGGTGCGCCACTCCGACCACAACAGCGTCTCGTGGGCTCCGCTGCTCTACC
GGTCGCCTTGGTCCATCTTGACGGGCCCGGCCGGTCGCGGGTCGGCCACGGTGGCCCGCGACGCGTTCCACCCCATGACG
GCGGACCTGGCGCAGGGCGGATGCTCGGCGCTGGAGGACGCGGTGGTGCTCGCGCGCGCCCTGTCGCGGGCGGCCACGCC
GGCGGAGGGGGTGGCGGCCTACGTGTCGGAGCGCCGTGGCCGGGCCGCCTGGCTGGTCGCCGGAGCCTACCTGTCGGGCT
GGGTTCAGCAGGGCGGGACCGACGCGC------AGGGCCTGCGCGGCTACTTTGTCAAGCTGTTCCGTGACTTGATCTTT
TACAGGTTCATCTTCCCCAAGCTCGCCGATACCTTGTGGTATGATTGCGGCGATCTGGTGCCACCGCAGTCCAAGGAGAA
GGGCAAGAACCACTTAGAGTGA----------------------------------------------------------
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>chr5D_1_TraesCS5D01G391600
TGCGGTTGTGTGTGTGGTACTTGTTTTGCACAGCCGGACACGTTTTCGGTGTTTGAAGGATACTTTCAAGTGATTGGGGG
A-GGAACCC-GCCTTGCAATGCCGAAGACAATCTGTGCGCCGGACACCTCGTCATTGAAGCCTGGTTCAGGGG-------
-----TCCTGGATTAAGGGGTCCTCGGGCGTCCGACCTGTTGGACATGGGCCGGACTGATGGGCCGTGAAGATACAAGAC
ATAAGACTCTCTCCCGTGTCCGGATGGGACTCTCTTTGGCGTGGATGGCAAGCCTGGCGTTCAGATATGAAGATTCGTTT
CTCTGTAACCGACTTTGTACAACCCTAGTCCCCTCCGGTGTCTATATAAACCGGAGGGCTTAGTCCGTAGAGGCAATCAT
AATCATACAGGTTAGACTTCTAGGGTTTCAGCCATTACGATCTCGTGGTAGATCAACTCTTGTAATACTCATATTCATCA
AGATCAATCAAGCAGGAAGTAGGGTATTACCTCCATAGAGAGGGCCCAAACCTGGGTAAACATCGTGTCTCGTGTCCCC-
TGTCCCCTGTTATCATCGACTCTAGACGCACAGTTCGGGA-GCTCCTACGTGAGATCCGCCAGTTTTGACACCAACAATA
GCCTGCCCAGCGACCTTCTTCTTCCCCTCCGACGGGTTTCTTCCATCAACCAAAATTGACTGACCCAATATTCAAGATAG
ATACTGGACACTGGAGTAGCTACTGTGAAAAAGTATAGCACAAAGTTTAGCACGGCACCAGTGACACTCACCCACTGGAT
CGGCCACTGCGTTTAATTTCTGGACCGGACGAGCAGTATGAACATT-ATGTTCAATCGCCCAACACCCAGCAGGATAAAT
AAAAAAATTCGTCAGATCATACTTGTGCTAGATCTGGCACGCTTGTTACCGATGTCTAACGAGACCTTTGGTGTCCGTCC
TAAGCATATAATT----GAGCAACGCCCACGAGATAGCCAGTGAGGTGAGGTGAGGTGACGATGTCATCGGCGGTGGAGG
CGGAGGCGGAGGTGGTCATCGTGGGCGCCGGGATCGCGCGCAGGGCTGGCGACCGCGCTGGCTATGCGTCGGACCGGCGT
GCG---------CGGCGGTGTTCTGGTCCTGGAGCGGCACGATGAGCTGCGCGCCACAGGCGCCGCGCTCACCATCTTCC
CTAGCGGCTGGTTCGCGCTGCGCGCGCTGGGCGT-GCGCACAAGCTCATGTCCGGCTACGACGCCTATGAAACGTGCGTC
GTTAGTTAGTAGTACAGT------------AGTATATGTCAACAAGAGAAAACAAAATTACGTACTTCGAGTCGATTCTC
TTGCTGCATGCAGATTTCAGGTGACCAATCTTGAAAATGGAGCAACTCAGGTGTTTCGCTTCGCTGGGCGCGAAAACAGG
TCTGTTGGTGAA-----------------GCAAATTTTCTGTTGGATTATTCATTAATCCGATCCCAATTAAATCTGATC
AATTTGGCTAAACCGATG---GATGCAAAAATGAAGCGGTGAAATCAAGGCGAGGCCGGCGGATCGAAAGGCGCTGCTGG
AAGCGCTCGCGGAGGAGCTCCCGCCGGGCACCATCCGCTTCTCGTCCAAGCTCGTCTCCATCGACAGTGAGACTACAGCC
GAGGAGGAGGGTTCGCCGGAGACCTCCGTTCTACGGTTAGACGACGGCACAGTGATCCGAGCCAAGGTAATCGACCAAGC
CAC----AATTAATTGTAGTAGTGCGCATCTGCACGTACTCC----TAGCCTAAGTCGTCTTGTCTTGTAAACGTCGTCC
AATCCACCAT---------CAGGTGGTGATCGGGTGCGACGGGGTGCACTCGGTGGTGGCGCGGTGGCTAGGCCTGTCGG
AGCCGGTGACATGCGGCCGGTCCGCCGTCCGCGGCCTCGCCGTCTACCCGGACGGCCACGGCATGAAGAGGGAGCTCCGG
CAGTTCCTCTCGGCGGGCCTGAGGGCCAGCAAGGTGCCCATCAGCGAGACGGAGGTCTACTGGTTCCTCGTCAACAACAC
CGTCGCCGCGGCAGAGGAAGAAGCCGGCGCGGACCCGGCCAAGAGCCCAAGATCCTGCGGGAGGTGACCAACAACCTGGG
GAGGCACATGCCGGCGGAGTACCTGGACGTGGTGCGCCACTCCGACCACAACAGCGTCTCGTGGGCTCCGCTGCTCTACC
GGTCGCCTTGGTCCATCTTGACGGGCCCGGCCGGTCGCGGGTCGGCCACGGTGGCCCGCGACGCGTTCCACCCCATGACG
GCGGACCTGGCGCAGGGCGGATGCTCGGCGCTGGAGGACGCGGTGGTGCTCGCGCGCGCCCTGTCGCGGGCGGCCACGCC
GGCGGAGGGGGTGGCGGCCTACGTGTCGGAGCGCCGTGGCCGGGCCGCCTGGCTGGTCGCCGGAGCCTACCTGTCGGGCT
GGGTTCAGCAGGGCGGGACCGACGCGC------AGGGCCTGCGCGGCTACTTTGTCAAGCTGTTCCGTGACTTGATCTTT
TACAGGTTCATCTTCCCCAAGCTCGCCGATACCTTGTGGTATGATTGCGGCGATCTGGTGCCACCGCAGTCCAAGGAGAA
GGGCAAGAACCACTTAGAGTGACATCGTGTTTAATCATCTGCTAAGCCACTGCAGCCTTCGAATTGATTGTTACTGCGGT
CTGTTTGATTCTCATTATTGTTTTCATAAATAAATTCTCCATCCTTCATAAGATATAGTAAATATTTCTACTACTCCCTC
TATTCCTAAATACTTCTTCCGTCCCAAAATTCTTGTCTTAGATTTGTCTAGGGATGTATCTTGTCTTAAATTTGTCTAGG
GATGTATCTAGTTACGTTTTAGTGTTAGATACATCCGTATCTAGACAAATCTAAGACAATAATTTTGGGACGGAGGGAGT
ATAAGTCTTTTAAGATTCCAATGCGGACTAGCAAAATAAGTGAATCTACATTTTAAAATATGTCTATATAAATCCGTATG
TAATTCTTATTGAAATCTCTAAAAAGACTTATATTTAGAAAAGGGGGAGTATGAGTGGTAGGTAGTAGGTTGTTCATAAA
TCAAATTATTTTATTTTTATCAAACTTGTATATAAAATATGCACGTATCGTTTGATGCGGAGGCCAAGGTAATCCTTCTT
TTCATAAATGAAAAAAAAATGTGCGCATCATTATGTGTCGGCTGCTCAGCTCCAATTTCACGAATATACGTGAAACTAGG
CTCGTCTAGTTAGCTTTTTGGTAGGGGAGACATATTGCTACATGGAGGAAGCAGCAGAACCGTAGGTGGGCCAGAAAACA
ACATGAATGGGTGGGGTCAGATCTTATCCGCCTATAATTTTTTGCTATTTACTCATGTGCGTATGAATTTTTTGGTGAAA
AATGTGCATATGATCTACACTATCCCTGCAAAAACTGTAGGGCAGCAATGCTAGAAAGAGGATTCGACGCACTTGGGTGC
TCCACCCCCTATATAAATATTATATTTGAAGAACAAAAATGGAAAATTAAAAAAATCTGGAATTTTGAAATATCAAACCT
AGATGTTCAATCTACTTCCATGTGAGTTTTCGTGAAAAAATACCAAGAAATGTACTGTCGGT
>chr3D_1
TGCGGT--TGTGTGTGGTACTTGTTTTGCAGAGCCGGACACGTTTTCGGTGTTTGAAGGATACTTTGGAGTAATTGAAGG
A-GGAAACC-GTCTTGCAATGCCGAAGACAATCTGCGCGCCGGACACCTCGTCATTGAAGCCTGGTTCAGGGGCTACTGA
GGGAGTCCTGGATTAAGGGGTCCTCGGGCGTCCGACCTGTTGGACATGGGCCGGACTGATGGGCCGTGAAGATACAAGAC
AGAAGACTCTTTCCCGTGTCCGGATGGGACTCTCCTTGGCGTGGACGGCAAGCCTGACGTTCGGATATGAAGATTCCTTT
CTCTGTAACCGACTTTGTACAACCCTAGTCCCCTCCGGTGTCTATATAAACCGGAGGGTTTAGTCCGTAGAGGCAATCAT
AATCATACAGGCTAGACTTCTAGGGTTTTAGCCATTACGATCTCGTGGTAGATCAACTCTTGTAATACTCACATTCATCA
AGATCAATCAAGCAGGAAGTAGGGTATTACCTCCATAGAGAGGGCCCGAACCTGGGTAAACATCGTGTC-------CCC-
TGTCTCCTGTTACCCTCGACCCTAGACGCACAGTTTGGTA-CCCCCTACCCGAGATCCGCCAGTTTTGACACCGACA---
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>chr3D_1
TGCGGT--TTTGTGTGGTACTTGTTTTGCAGAGCCGGACTCGTTTTCTGTATTCGAAGGATGCTTTGGAGTATTTGGAGG
A-GGAACCC-GCCTTGCAATGCCGAAGACAATCTGCGCGCCGGACACCTCGTCATTGAAGCCTGGTTCAGGGGCTACTGA
GGGAGTCCTGGATTAAGGGGTCCTCGGCTATCCGGACTATGTGACGTGGGCCGGACTAATGGGCTATGAAGATACAAGAC
AGAAGACTTCGTCCCGTGTCTGGATGGGACTCTCCTTGGCGTGGAAGGCAAGCTTGGCGTTCGGATATGTAGATTCCTTT
CTCTGTAACCAACTTTGTACAACCCTAG-CCCCTCTGGTGTCTATATAAACCGGAGGGATTAGTCCGTAGAGGCAATCAT
AATCACATAGGCTAGACTTCTAGGGTTTTAGCCATTACGATCTCGTGGTAGATCAACTCTTGTAATACTCATATTCATCA
AGATCAATCAAGCAGGAAGTATGGTATTACCTCCATAGAGAGGGCCCGAACCAGGGTAAACATCATGTC-------CCC-
CGCCTCCTGTTACCATCAACATTAGACGCACAGTTCGGGTT-CCCCTACCCGAGATCCGCCGGTTTTGACACCGACAA--
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>chr6D_1
TGCGGT--TGTGTGTGGTACTTGTTTTGCAGAGCCGGACACGTTTTCTGTGTTCGAAGGATGCTTTGGAGTATTCGAAGA
A-GGAACCC-GCCTTGCAATGCCGAAGACAATCTGTGCGCCGGACACCACGTCATTGAAGCCTGGTTCAGGGGCTACTGA
GGGAGTCCTGGATTAAGGGGTCCTCGGGCGTCCGGCCTGTTGGACATGGGCCGGACTGATGGGCCGTGAAGATACAAGAC
AGAAGAGTCTCCCCCGTGTCCGGATGGGACTCTCCTTGGCGTGGATGGCAAGCTTGGCGTTCAGATATGAAGATTCCTTT
CTCTGTAACCGACTTTGTACAACCCTAGTCCCCTCCGATGTCTATATAAACCGGAGGGTTTAGTCCGTAGAGGCAATCAT
AATCATACAGGCTAGACTTCTAGGGTTT-AGCCATCATGATCTTGTGGTAGATCAACTCTTGTTATACTCATATTCATCA
AGATCAATCAAGCAGGAAGTAGGGTATTACCTCCATAGAGAGGGCCCGAACCTGGGTAAACATCGTGTC-------CCA-
TGTCTCCTGTTACCATCGACCTTAGATGCACCTTTCGGGA-CCCCCTACTCGAGATCCGCCGGTTTTGACACCGACA---
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>chr3A_1
TGCGGT--TGTGTGTGGTACTTGTTTTGCAGAGCCGGACACGTTTTCTGTGTTTGAAGGCTGCTTTGGAGTATTCGGAGG
A-GGAACCC-GCCTTGCAATGCCGAAGACAATCTGCGCGCCGGACACCTCGTCATTGAAGCCTGGTTCAGGGGCTACTGA
GGGAGTCCTGGATTAAGGGGTCCTCGGGCGTCCGGCCTGTGTGATGAGGGCCGGATTGATGGGCCATGAAGATACAAGAC
AGAAGACTCTCTCCCGTGTCCGGATGGGACTCTCCTTTGCGTGGATGGCAAGCTTGGCGTTCAGATATGAAGATTCCTTT
CTCTGTAACCGACTTTGTACAACCCTAGTCCC-TTCAGTGTCTATATAAACCAGAGGGTTTAGTCCATAGAGGCAATCAC
AATCATACAGGCTAGACAACTAGGG-TTTAGCTATTACGATCTCGTGGTAGATCAACTCTTGTAATCCTCATATTCATCA
AGATCAGTCAAGCAGGAAGTAGGGTATTACCTCCATTAAGAGGGCCCTAACCTGGGTAAACATCGTGTC-------CCC-
TGTCTCCTGTTACCATCGACCTTAGACGCATAGTTCGGGA--CCCCTACCCGAGATCCGCCGGTTTTGACACCGACA---
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>chr4D_1
TGCGGT--TGTGTGTGGTACTTTTTTTGCAAATCCGGACATGTTCTTTGTGTTCGAAGGCTGTTTTGGAGTATTCGGAGA
A-GGAACCC-GCATTGCAATGCCGATGACAATATGCGCGCCGGACACCTCGTCATTGAAGTCTGGTTCAGGGGCTACTGA
GGGAGTCCTGGATTAAGGGGTCCTCGGGCATCTGGCCTGTTGGACATGGGCCGGACTAATGGGCCATGAAGATACAAGAC
AGAAGACTCTCTCCTGTGTCCGGATGGGACTCTCCTTGGAGTGGATGGCAAGCTTGGCGTTCGGATATGAAGATTCCTTT
CTCTGTAACCGACTTTGTACAACCCTAGTCCCCTCCAGTGTCTATATAAACCGGAGGGTTTAGTCCGTAGAGGCAATCAC
AATCATACGTGATAGTCTTCTAGGGTTTTAGCCATTACGATCTCGTGGTAGATCAACTCTTGTAATACTCATATTCATCA
AGATCAATCAAGCAGGAAGTAGGGTATTACCTCCATAGAGAGGGCCCGAACCTGGGTAAACATCGTGTC-------CCCC
TGTCTCCTATTACCATCGACCTTAGACATACAGTTCGGGACCCCCCTACCTGAGATCCGCCGGTTTTGACGCCGACAA--
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>chr5A_1
TGCGGT--GGTGTGCAGAACTTGTTTTGTAAAGCCGGACACGTTCTTTGTGTTCGAAGGCCATTTTGGAGTATTCGGAGG
A-GGAA-CCTGCCTTGCAATGCCAAAGACAATCTGCGCGCCAAACACCTCGTCATTGACGCCTGGTTC------------
-GGAGTCCCGGACTAAGGGGTTCTCGGGCGTCCGGCCTGTTGGACATGGGCCGAACTGATGGGCTACAAAGATACAAGAC
CGAAGACTCTCACCCATGTCCGGATGGGACTCTCCTTGGCGTGGATGGCAAGCTTGGCATTCGGATATGAAGATTCCTTT
CTCTATAACCGACCTTGTATAACCCTAGTCCCCTCCGGTTTCTATATAAACCGGAGGGTTTAGTCCGTAGGGACTATCAT
AATCACATAGGCTAGACTTTTAGGGTTTTAGCCATTATGATCTCGAGGTATATCAACTCTTGTAATACTCATATTCATCA
AGATCAATCAAGCAGGAAGTAGGGTATTACCTCCATAGAGAGGGCCCAAACCTGGGTAAACATCGTGTC-------CCC-
T-TCTCCTATTACCATCAACCATAGATGCATAGTTTGGGA-CCCCCTACCCAAGATCCGCCAATTTTGACACCGACAACA
G-------------------------------------------------------------------------------
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>chr5D_3
CGGC--TGTGTGTGTGGTACTTGTGTTGCAGATCTGGACACGTTCGTTCA-TCTGAAGACTGTCTTGGAGTATTCGGAAA
GGGGAA-CCCGCCTTGCAATGCCAAAGACAATCTGCGC--CGGACACCTCGTCATTGAAGCCT------GGGGCTACTAA
GGGAGTCCTGGACTAAGGGGTCCTCGGGCGTTCGGCCTGCTGGACATGGGCCGGACTAATGGGCTGTGAAGATACAAGAC
CGAAGACTCTCTCCCGTGTCCGGATAGGACTCTCCTTGGCGTGGAAGGCAAGCTTGGCGACCAAATATGAAGATTCCTTT
CTCTGTAATCGACTTTGTACAACCCTAGTCCCCTCCGATGTGTATATAAACCGGAGGGCTTAGTCCGGAAACATAT--AC
AATCATACAGGCTAGACTTCTAGGGTTTTAGCCATTACGATCTCGTGGTAGATCAACTCTTGTAATACTCATATTCATCA
AGATCAAGCAAGCAAGAAGTAGGGTATTACCTCCATAGAGAGGGCCCGAACCTAGGTAAACATTGCGTC-------CCCC
-ATCTCCTATTACCATCAACCTTAGACGCATAGTTCGGGA-CCCCCTACCCGAGATCCGCCGGTTTTGACACCGACA---
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>chr5D_9
--------TGTGTGTGGTACTTGTTTTGTAGAGCCGGACACGTTTTCGGTGTTTGAAGGATACTTTGAAGTGATCGGAGG
A-GGAA-CC-GCCTTGCAATGCCGAAGACAATCTGCGCGCCGGACACCTCGTCATTGAAGCCTGGTTCAGGGGCTACTGA
GGGAGTCCTGGATTAAGGGGTCCTCGGGTGTCTGGCCTGTTGGACATGGGCCGGACTGATGGGCCATGAAGATACAAGAT
AGAAGACTCTCTCCTGTGTCCGGATAGGACTCTTCTTGGCGTGGATGGCAAGCTTGGCGTTCGGATATGAAGATTCCTTT
CTCTGTAACCGACTTTGTACAACCCTAGTCCCCTCCAGTGTCTATATAAACCGGAGGGGTTAGTCCGTGGAGGCAATCAT
AATCATACAAGCTAGACTTCTAGGGTTTTAGCCATTACGATCTCATGGTAGATCAACTCTTGTAATACTCATATTCATCA
AGATCAATCAAGTACGAAGTATGGTATTACCTCCATAGAGAGGGCCCGAACCTGGGTAAACATCGTGTC-------CCC-
TGTCTCCTGTTACCATCGACCCTAGACGCACAGTTCAGGA-CCCCCTACCCAAGATCCGCCGGTTTTGACACCGACA---
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>chr1D_9
--------TGTGTGTGGTACTTGTTTTGCAGAGCCGGACATGTTTTCGGTGTTCGAAGGATACTTTGGAGTAATCGAAGG
A-GGAA-CCCGCCTTGCAATGCCGAAGACAATCTGCGCGCCGGACACCTCATCATTGAAGCCTGGTTCAGGGGCTACTGA
GGGAGTCCTGGATTAAGGGATCCTCGGGCGTCCGACCTATTGGACATGGGCTGGACTGATGGGCCATGAATATACAAGAT
AGAAGACTCTCTCCCGTGGTCGGATAGGACTCTCCTTGGCGTGGATGGCAAGCTTGGCGTTCGGATATGAAGATTCCTTT
CTCTGTAACCGACTTTGTACAACCCTAGTCCCCTCCGGTGTCTATATAAACTGGAGGGTTTAGTCTGTAGAGGCAATCAT
AATCATATAGGCTAGACTTCTAGGGTTTTAGCCATTACGATCTCGTGGTAGATCAACTCTTGTAATACTCATATTCATCA
AGATCAATCAAGCAGGAAGTAGGGTATTACCTCCATAGAGAGGGCCCGAACCTGGGTAAACATCGTGGC-------CCC-
TGTGTCCTATTACCATCGACCTCAGACGCACAGTTCGGGA----------------------------------------
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>chr2D_57
AGGTA---------------------------------------------------------CTTTGAAGTGATCGGAGG
A-GGAA-CCCACCTTGCAATGCCGAAGACAATCTGCGCGCCGGACACCTCGCCATTGAAGCCTTGTTCAGGGGCTACTGA
GGGAGTCCACGAT---------------CGTCCGACCTGTTGGACATGGGCCGGACTGATGGACCGTGAAGATACGAGAC
AGAAGACTCTTTGCCGTGTCCGGATGGGACTCTCCTTGGCGTGGATGGCAAGCTTGGTGTTCGGATATGAAGATTCCTTT
CTCTGTAACCGACTTTGTACAACCTTAGTCCCCTTCGGTGTCTATATAAACTGGAGGGTTTAGTCCGTAGAGGCAATCAT
AATCATACAAGCTAGACTTCTAGGGTTTTAGCCATTACGATCTCGTGGTAGATCAACTCTTGTAATACTCATATTCATCA
AGATCAATCAAGCAGGAAGTAGGGTATTACCTCCATAGAGAGGGCCCGAACCTGGGTAAACATCATGTC-------CCC-
TATCTCCTGTTACCATCGACCTTAGACGCACAGTTCGGGA-CCCCCTACCCGAGATCCGCCGGTTTTGACACCGACA---
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>chr5B_761
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--------------------------------------------------------ACCAGGGACACTCACCCACTCGAT
CGGCCACCGTGTTTAATTTTTGGACCCGACGAGCAGTATCAGCATTCATGTTCAATCGCCGAACACCCGGCACGATAAAT
AAAAAAATTCGTCAGATCGTACACGAGGGCGGCAACGTGACC---TTACCGATGTCTAACGTGACCTTTGGTGCCCGTCC
TAAGCATATAATTGAGGGAGCAACGCACACGAGGTAGCCGGCTAGTGAGGGTGAGGTGGCGATGTCATCGGCGGTGGAGG
CGGGGGCGGAGGTGGTCATCGTCGGCGCCGGGATCGC----AGGGCTGGCGACCGCGCTGGCTCTGCGGCGGGCCGGCGT
GGG---------CGGCGGCGTTCTGGTCCTGGAGCGGCACGCCGAGCTGCGCGCCACGGGCGCCGCGCTCACCATCTTCC
CCAGCGGCTGGTTCGCGCTCCGCGCGCTGGGCGTCGCGCACAAGCTCATGTCCCGCTACGACGCCTACGAAACGTGCGTC
GTCAGCTTTGCCTTTCCTTGTTCTTAGTACAGTATATATCAACAAGAGAAAACAAAATTACTTT----GAATCGATTCTG
TTGCTACATGCAGATTTCAGGTGACCAATCTTGAAAATGGAGCTACTCAGGTGTTTCGCTTCGCTGCACGCAAAAACAGG
TCTGTTGGTGACACCTGTTGATCGAGTCGATAGCAGAACTAATACTAGCATAGACATAGAG----------AATCTGATC
AATTTGGCTGCTAAACCAATCGATGCAAAAATGAAGCGGCGAAATCAAGGCGAGGCCGGCGGATCGAAAGGCGCTGCTGG
AAGCGCTCGCGGAGGAGCTCCCGCCGGGCACCATCCGCTTCTCGTCCAAGCTCGTCTCCATCAACAGCGAG---ACAGCC
GAGGAGGAGGGTTCGCCGGAGACCTCCGTTCTCCGGTTAGACGACGGCACAGTGATCCGAGCCAAGGTAATACACCAAGC
CACACTTAATTAATTGTAGTCGTGCGCATCTGCTAGTACTCGATCATAGCCTAAGTCGTCTTGTCTTGTAAACGTCGTCC
AATCCACCAT---------CAGGTGGTGATCGGGTGCGACGGGGTGCACTCGGTGGTGGCGCGGTGGCTAGGCCTGTCGG
AGCCGGTGACATGCGGCCGGTCCGCCGTCCGCGGCCTCGCCGTCTACCCGGACGGCCACGGCATGAAGAAAGAGCTCCGG
CAGTTCCTCTCGGCGGGCCTCAGGGCCAGCATGGTGCCCATCAGCGACACGGAAGTCTACTGGTTCCTCGTCAACAACAC
CGTCGCCGCAGCGGAGGAAGAAGCCGGCGCGGACCCGGCCAAGA--------TCCTGCGGGAGGTCACCGAGAACCTGGG
GAAGCACATGCCGGCCGAGTACCTGGACGTGGTGCGCCACTCGGACCACAAGAGCGTCTCGTGGGCTCCGCTGCTCTACC
GGTCGCCTTGGGGCATCTTGACGGGCCCGGCCGCTCGCGGGTCGGTCACGGTGGCCGGCGACGCGTTCCACCCCATGACG
CCGGACCTTGCGCAGGGCGGATGCTCGGCGCTGGAGGACGCGGTGGTGCTCGCGCGCGCCCTGTCGCGGGCGGCCACGCC
GGCGGAGGGGGTGGCGGCCTACGTGTCGGAGCGCCGTGGCCGGGCCGCCTGGCTGGTCGCCGGAGCCTACCTGTCGGGCT
GGGTCCAGCATGGCGGGATCAACAACGCGCAGGAGGGCCTGCGGGGGTACCTTGTCAAGCTGTTCCGTGACTTGATCTTT
TACAGGTTCATCTTCCCCAAGCTCGCCGATACCTTGTGGTATGATTGCGGCGATCTGGTGCCCCCGCCGTCCAAGGACAA
GGGCAAGAAGCACTCAGAGTGACATCGTGTTTA-----------------------------------------------
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>chr2D_1008
CGGCCGTGGACGTC------------------------------------------------------------------
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--GACGCTGAGATGGTCATCGTCGGCGCCGGGATCGC----GGGGCTCGCGACCGCGCTGGCGCTGCGGCGGCTCGGCGT
GGGCGCGGCTGGCGGCGGCGTCCTGGTGCTGGAGCGGCACGCCGAGCTGCGCTCCACAGGCGCCGCGCTCACCATCTTCC
CCAACGGCTGGTTCGCGCTCCGCGCCCTCGGCGTCGCGCACAAGCTCACCTCCCGCTACGATGCCTTCGAAACGTGCGTC
TCCGTTGCTGGCAGTGATTTGTGATAGTTCCTTGTCTGTGATTATTGCTCTGAATTCAGCCATGTC--------------
-TGCTGCATGCAGATCCCGAGTGACTACTCTGGAAACTGGAGCAACGCAGGTGTTCCGCTTTGCAGGGCGTAAAAGCAGG
TTAGATGAGCGGATGCTTTGTCTGTCGTGGCAAATTTTCTGTTGGATTCCACCGGAACTTGAGCTAATCAGTCGGCTACA
--------------------------------GCAGCGGCGACGTGAGAGTGAGACCGATGCATCGGAAGGCGCTGCTGG
AGGCGCTCGCGGAGGAGCTGCCTCCGGGCACCATCAGGTTCTCGTCCAAGCTCGCCTCGATCGCCACCGAGA--------
-AGGCGCAGGGTTCCCCGGAGATCGCCGTCCTACGGTTAGACGACGGTACGGTGATCCGATCCAAGGTACACCAATGACC
GCAGCGACGCACTCACATGTGACATGTGAAGATTAGTATACAATACTAACTTTTTCTTTCGAAGAATGACAAGTGGGTTT
GCATGTTCATTAATTTGACCAGGTGCTGATCGGGTGCGACGGGGTGCACTCCGTGGTGTCGCAGTGGCTGGGCCTGTCGG
AGCCGGCGAGCTCAGGCCGGTCCGCCGTCCGCGGGCTCGCCGTGTACCCGGACGGGCACGGCCTGAAGAAGGAGCTCCGG
CAGTTCCTCTCGGAGGGTCTGAGGGCCGGCATGGTGCCCATCAGCGACACCGATGTCTACTGGTTCCTCGTCAACAACAC
CGTCCCTGCAG---AGCAGGAGGCCGGCACGGACCCCGCCAAGA--------TCCTGCGGGAGGTCACGGACAACCTGGG
CAGGCACATGCCGGCGGAGTACCTGGACGTGGCGCGCCACTCCGACTCCGGCAACCTGTCGTGGGCGCCACTGCTGTACC
GCGCCCCCTGGGCCATCCTCAGGGGTCCGGCGGCCCGCGGGCCGGTCACGGTGGCCGGCGACGCGTTCCACCCGATGACC
CCCGACATGGCGCAGGGCGGGTGCTCCGCGCTGGAAGACGCGGTGGTGCTCGCGCGCGCTTTGTCTCGGGCGGCCACGCC
CGCCGACGGCGTGGCCTCCTACGTGGCTGAGCGGCGTGGCCGGGCTGCCTGGCTGGTCGCCGGGGCATACCTGTCGGGCT
GGGTCCAGCAGGGCGGGACCAACGTCCG------GGGCGTGCGAGGGTACATGGTCAGGCTGTTTCGCGACTGGATCTTT
TACAGGTTCTTGTTCCCCAGGCTCGCCGATACAATGTGGTTCGATTGCGGCGACCTGGTG--------------------
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>chr2A_1780
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-------------------CAGGTGCTGATCGGGTGCGACGGGGTGCACTCCGTGGTGTCGCAGTGGCTGGGCCTGTCGG
AGCCGGCGAGCTCAGGCCGGTCCGCCGTCCGCGGGCTCGCCGTGTACCCGGACGGCCATGGCCTCAAGAAGGAGCTCCGG
CAGTTCCTCTCGGAGGGTCTCAGGGCCGGCATGGTGCCCATCAGCGACACCGATGTCTACTGGTTCCTCGTCAACAACAC
CATCCCGGCAG---AGAAGGAGGCCGGCACGGACCCCGCCAAGA--------TCCTGCGGGAGGTCACGGACAACCTGGG
CAGGCTCATGCCGGCGGAGTACCTGGACGTGGCGCGCCACTCCGACTCCGACAACCTGTCGTGGGCGCCGCTGCTGTACC
GCGCCCCCTGGGCCATCCTCAGGGGTCCGGCGGCCCGCGGGCCGGTCACGGTGGCCGGCGACGCGTTCCACCCCATGACC
CCCGACATGGCGCAGGGCGGGTGCTCCGCGCTGGAGGACGCGGTGGTGCTCGCGCGCGCTTTGTCTCGGGCGGCCACGCC
CGCCGACGGCGTGGCCTCCTACGTGGCAGAGCGGCGTGGCCGGGCTGCCTGGCTGGTCGCCGGGGCTTACCTGTCGGGCT
GGGTCCAGCAGGGCGGGACCAACGTCCG------GGGCGTGCGAGGGTACATGGTCAGGCTGTTTCGCGACTGGATCTTT
TACAGGTTCTTGTTCCCCAGGCTAGCCGATACAATGTGGTTCGATTGCGGCGACCTGGTG--------------------
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>chr2B_1780
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-------------------CAGGTGCTGATCGGGTGCGACGGGGTGCACTCGGTGGTATCGCAGTGGCTGGGCCTGTCGG
AGCCGGCGAGCTCAGGCCGGTCCGCCGTCCGCGGGCTCGCCGTGTACCCGGACGGGCACGGCCTGAAGAAGGAGCTCCGG
CAGTTCCTCTCGGAGGGTCTGAGGGCCGGCATGGTGCCCATTAGCCACACCGATGTCTACTGGTTCCTCGTCAACAACAC
CGTCCCTGCAG---AGCAGGAGGCCGGCACGGACCCCGCCAAGA--------TCCTGCGGGAGGTCACGGACAACCTGGG
CAGGCACATGCCGGCGGAGTACCTGGACGTGGCGCGCCACTCCGACTCCGGCAACCTGTCGTGGGCGCCGCTGCTGTACC
GCGCCCCCTGGGCCATCCTCAGGGGCCCGGCGGCCCGCGGAGCGGTCACGGTGGCCGGCGACGCGTTCCACCCCATGACC
CCAGACATGGCGCAGGGCGGGTGCTCCGCGCTGGAGGACGCGGTGGTGCTTGCGCGCGCTTTGTCTCGGGCGGCCACGCC
CGCCGACGGCGTGGCCTCCTACGTGGCAGAGCGGCGTGGCCGAGCTGCCTGGCTGGTCGCCGGGGCATACCTGTCGGGCT
GGGTCCAGCAGGGCGGGACCAACGTCCG------GGGCGTGCGAGGGTACATGGTCAGGCTGTTTCGCGACTGGATCTTT
TACAGGTTCTTGTTCCCCAGGCTCGCCGATGCAATGTGGTTCGATTGCGGCGACCTGGTG--------------------
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>SNPs
------------------------------S-----------------------------------S----------S--
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-S--------------------------------S-----------------------------------------S---
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-----------S----------------S---------------------------------------------------
---------------------------------------------------------------------SSSSSSS----
----S-------S-------S--------------------S-S-----S-----------------------S----S-
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--------------S---
-------S-S---------S------S------------S-S------------------S-------S---S-------
------------------S---SS-S-SSS-SSSSS-SSSS-SSS----------------S-----------S------
--------------------------S------S-----S-SS--SSSS---------S---------------------
----------------------S--------------SSSS----------------------S----S---S-------
-S----------------S----------------------SS-------------------------------------
-S-----------------S---------------------------------S-------------S------------
--S----SSSSS-SSSS--------------------------------------------S-SSSSS--S--------S
-----------------------------------------------------------------------S--------
-----------S------------------------------------SS--SSS--SSS--S-SS-SSSS---------
---------SSSSSSSSS---------------------S----------------------------------------
-------------------------------------------------------------------S----SS------
------------------------------------------------------------------------S-------
--------------------S------------SS------S--------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
-------------------------------S---------------S-----S--------------------------
---------S--S-------------------------------SSSSSSSS-------------S---S----------
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-----------S---------------------S-----------S----------S-----------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------S---SS-----------------S--S---S-----------------------------
--------------------------------------------------------------S----S---------S--
---------S----S------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_688
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----------------------------CCGACGGGTTTCTTCCATCA--------------------------------
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>reverse_2687
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----------------------------------------------CCACTGCAGCCTTCGAATTG--------------
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