>input_sequence_47871
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------------------------------ATGGCGCTGGCGGCGGCGGCGGCCTTGGCGTGGCCATGCCTGGTGAGTTC
CCACCCCCACCCCCTGGCTTCCCCTCCCCTTTTAACCCCTCCGCCGGGCTTCCTCGGCGGCAATAGCAACAGCACCATGG
AGTTTCTTGGGTTTACGCTCATGGTTGTTGTTTTCTCCTTTCTTTTTCGCCGATCTTGGCAACCGAGCGAGCGGGAATGT
CTGTTGTTCTGTGGCTGACGGGGGAGCTGGCCGGTTGTTTGTGTAGGGTGGGAACTCGCCGGCGTGGATTGACGTCCCGG
AGCGGAGCAAGAGCGCGTTCATGGAGCTGAAGAGGAGGAAGGTGCACCGGTACGTGATATTCAAGATCGACGACAGCACG
GAGGAGGTCGTGGTCGAGAAGACCGGTGCGCCCGGGGAGAGCTATGACGACTTCACGGCCTCGCTGCCTGTCGACGACTG
CCGCTACGCCGTCTACGACCTGGATTTCGTCAGCGACGACAACTGCCGCAAGAGCAAGATTTTCTTCATCTCCTGGTTAG
CCTCGTCTTTCTTGCCCCCTGTTTCTTGTCACCTGTGACTGAATTCAGTTTGGTTACAGAGTTGAAGATTCTATCT-AGG
CAGATGTATTTATTTGCTATGATAATTGTTCAAAAGGATTTATGGTTGTGTTAATTGTGGAAAAAGATTTATTGCTATGA
TAATTCTCCAAAAAGATTTATTGCTGTGCTAAACACTTAAACAGCGATGGGGTGGGTTCAGAAGCACAGCTTCAGTAAAA
CTGGGGGTGGCTGACCCCAGTCATTGTACAATCCTTTCAGCTTTCAGTTGTTA-------GGATGTTCATACGCGTTACA
TGATACTCTGTCCAATAAGCATTATGTTTCAAGCTCACCCAACGACCAACTTAATTCTCTC--ATATCCTACAAAGGAAA
CATTTTATTTTTC-GTGTAACCTCGCGAAGGTAACAGCAAAGCGATGAATACAAAAGTGCAATTCAGTAACAATGGGGCT
AGCTGACGGCAGTGCACTTGACAATACTTTTCAGTTGTCAGTGGTTAGAATGTTTTTTAGACAAGAATGTTTGTGTACAC
AGTACACTAGTAATCGTGTACCTGCCATGCACGTGTATATTAGGTAGGATATTAGTTCCACGTTATATTAGGTAAGATGT
ATTAGTTGCACGTTGATATTTGGTAAGATATTAATTAAATGTTAGATTTCATGGGATAGCGTTTTTAAAATTTGATGAAA
TGTCCATGTGGGAGATACATATCACTTGCACTGCATGACTC-CCATGGATTTTCCATTCATGGTACTGAATACCTGTTTT
TTTGTTTCAGTTTTTGTAGGGTATTCTTGTCAGTTGTCACAGGTAGCTGCTACTAATTCCTAAGAAGATAACAATATTAC
AGCTGTTCCCTTTCTTTTCAGGTCTCCTGATGATTCTCGCATCCGTGCAAAGACCATATATGCTGTGTCGAGGAATCAAT
TCCGCCACGAGCTCGACGGGGTGCACTTTGAGATCCAGGCAACTGACCCTGGCGACATGGACTTGGAAGTTCTCAGGGTC
CGTGCTAATAGAACCTGA--------------------------------------------------------------
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----------------------------------------------------------------------------
>chr1A_1_TraesCS1A01G183100
ATTTACTTCTCATGAATGCATGAATTTGCTTATGCGAGAAGAATGACCGTGGCTTTCGAAAAACAAAAAAACTTCCTATC
ATGAAAGGCACGGATTTGCTTCTCGTGGAGGCACGGATTTGTTTTCCACAAGACACGGCTGCGCCTCTCGAAAAAGAAAA
AAATGTGTTTTTTTTTCTTCTTCCATGAGAGGTATAAATTTACTTCTCGTGGAGGCACAGATTTGCTTCCGCGAGAGGCA
CGGTTGTGTCTCTCGGAAAGGGG-AAAATGTGCTCCCGATTTGGGTTTTTTCGTGAAAACTTTTCATCGAAACCTGTCAA
TATATGATCTAGTTTTGAAGATCTCGACACGAGAAATCACACAATGAAAACGGTTCGAGATTTGACATACGGTTTGAGAG
ATAAAATATTTTGAATAAACGAATCTACGAAAAAAGTGAAACTTACAGGTTACAACAAGTGGATGGAGCACATGTAATGC
GATGCTTGC--CAATCTGGAAATGTGGGAGTG------------------------------------------------
----------------TGGAGAACCATCCATCTCGCTTAATGCGAGACACAGTGCTCGCGCTTCGAAACCACTTTTTGAA
CGAAAATAATCTTTCTATTGGGCCGGGCTTAATGCGAGACACAGTGCTCGCGCTTCGAAACCACTTCTTGAACGAAAATA
ATCTTTATATTGGGCCGGGCTCTCCATATTAGCAGGGCCGTCTATAGGCTCCCTAATCCTTTATAATGCCGGCTACTATT
TGATTCACAGACTGGGCCTCTTTGATGGCCCAAATCTAGGTTGAAGGCGTGGA--TTTCAACTGGACGCGGCGGGGCGCC
GCGCACGAATTCCATGATCCCATCATCAATA-GCTTTCTCGATCCCGCCTCCCATCGGAAAACTAAACTAATCCCACCTC
AACCCAATCTCCTCCACCCCCCGTGGGATCGATCCCTCGGCCCGCCCGCCTCCCTCGGATCGACCAGAGCCACCCCGCCG
CGAGACCAGGATCTTGGCGAGCGAGAGCACATGGCGCTGGCGGCGGCGGCGGCCTTGGCGTGGCCATGCCTGGTGAGTTC
CCACCCCCACCCCCTGGCTTCCCCTCCCCTTTTAACCCCTCCGCCGGGCTTCCTCGGCGGCAATAGCAACAGCACCATGG
AGTTTCTTGGGTTTACGCTCATGGTTGTTGTTTTCTCCTTTCTTTTTCGCCGATCTTGGCAACCGAGCGAGCGGGAATGT
CTGTTGTTCTGTGGCTGACGGGGGAGCTGGCCGGTTGTTTGTGTAGGGTGGGAACTCGCCGGCGTGGATTGACGTCCCGG
AGCGGAGCAAGAGCGCGTTCATGGAGCTGAAGAGGAGGAAGGTGCACCGGTACGTGATATTCAAGATCGACGACAGCACG
GAGGAGGTCGTGGTCGAGAAGACCGGTGCGCCCGGGGAGAGCTATGACGACTTCACGGCCTCGCTGCCTGTCGACGACTG
CCGCTACGCCGTCTACGACCTGGATTTCGTCAGCGACGACAACTGCCGCAAGAGCAAGATTTTCTTCATCTCCTGGTTAG
CCTCGTCTTTCTTGCCCCCTGTTTCTTGTCACCTGTGACTGAATTCAGTTTGGTTACAGAGTTGAAGATTCTATCT-AGG
CAGATGTATTTATTTGCTATGATAATTGTTCAAAAGGATTTATGGTTGTGTTAATTGTGGAAAAAGATTTATTGCTATGA
TAATTCTCCAAAAAGATTTATTGCTGTGCTAAACACTTAAACAGCGATGGGGTGGGTTCAGAAGCACAGCTTCAGTAAAA
CTGGGGGTGGCTGACCCCAGTCATTGTACAATCCTTTCAGCTTTCAGTTGTTA-------GGATGTTCATACGCGTTACA
TGATACTCTGTCCAATAAGCATTATGTTTCAAGCTCACCCAACGACCAACTTAATTCTCTC--ATATCCTACAAAGGAAA
CATTTTATTTTTC-GTGTAACCTCGCGAAGGTAACAGCAAAGCGATGAATACAAAAGTGCAATTCAGTAACAATGGGGCT
AGCTGACGGCAGTGCACTTGACAATACTTTTCAGTTGTCAGTGGTTAGAATGTTTTTTAGACAAGAATGTTTGTGTACAC
AGTACACTAGTAATCGTGTACCTGCCATGCACGTGTATATTAGGTAGGATATTAGTTCCACGTTATATTAGGTAAGATGT
ATTAGTTGCACGTTGATATTTGGTAAGATATTAATTAAATGTTAGATTTCATGGGATAGCGTTTTTAAAATTTGATGAAA
TGTCCATGTGGGAGATACATATCACTTGCACTGCATGACTC-CCATGGATTTTCCATTCATGGTACTGAATACCTGTTTT
TTTGTTTCAGTTTTTGTAGGGTATTCTTGTCAGTTGTCACAGGTAGCTGCTACTAATTCCTAAGAAGATAACAATATTAC
AGCTGTTCCCTTTCTTTTCAGGTCTCCTGATGATTCTCGCATCCGTGCAAAGACCATATATGCTGTGTCGAGGAATCAAT
TCCGCCACGAGCTCGACGGGGTGCACTTTGAGATCCAGGCAACTGACCCTGGCGACATGGACTTGGAAGTTCTCAGGGTC
CGTGCTAATAGAACCTGATAGCTAGGTTGACTCTGCTAGCTTGCTGATACACACCAGTAGCTCAAGATGCGTAGCCTGCT
ACTAAAATGCGGCGCTGGTGCACTGATGTGAAGCATGGTGTATAATCCGGCTGCTGATCACACCTGAGTATGCAGTGTTC
CTTTTTTCAGGAGATAGCATCTCAGCGATATTAATATAGCTAGATAAGTTCCCTATAATATGATGTGGAAACGGCTCCAT
TTAATGTCTAGTTGCGCATGTACTATTTGTCTTCTCCTAAGCAACAGTTTTGTTGAGCTTAAACTGCTACTGCTCGGTGG
TTTTGTAATAG---------TTTCTGTTTTTTCTTTTTTTGTACTGAATGTTCAGTCAATCATGGAGCATGATTTGCTAC
TTACAGTGGTGTTGTGCTTGTTCTGCTATTTTTTGTCAGGGTTCTTCTGCTACTCTACTGCTATATTATGCATAGTGAAT
AAGTGTAACTCTGGTATTTCCAGTGTCCAAGGAATGGCTGTTGTCATCATGTCCTTTGATGTTTTCCCTG---TTTTTTT
ACATGAAAACAGACTTGGCAAATGTACAAACCTGTTTTTCTTTGTCTTTAGAGAGAGCTATAAATCAAATTCTAACAATA
TTAGCAGTTGTTTTGACTTTCGAGTACTATTGTTCTTTCCCCCCACAAGTCATTCCTTGTTGCTTTATCTCAATTATTAT
GTGGTCTGATACAACTTCATGATAATTTCCTTTGCATCACCACAATTATATGTATGGAATTTGTTGTCATTTAGCTTTGC
ATTTGATTATGATAATTCTGCCAGGATTAGATGTTTTAGACTAATCAGTGCTGTGT------GCCCTCCCAGTTTTTTTT
TTCCTTAAATTGCTAACAAACAAGTACAGTACTTATTTGTGTGTTTCAGAATATATACACTGAAAGCGTGGCAACCATAC
GATAGCATAATTTGACTTGTCTCCACGGCAAAGCACAATACTAAACCCAACTGAGTTTATTCGCCACAGTAAACAT
>chr1B_196
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AAATTTACTTCTCGTGGAGGCACATATATGCTTCCGCGAGAGGCA
CGAACGTGTCTCTTGGAAAGGGAAAAAACATGCTCCCAGTTTGGGTTTTGTTGTGGAATTTTTTCATCGAAACCTATCAA
TATATGATCTAATTTTGAATCTCTCGACGCGAGGAGTTCCACGGTGAAAACTGTTCAAGATTTGACGCACGGTTTGAGAG
ATAAAATATTTTGAATAAACGAATCTACGGAAAAGGAAAAACTCACAGGTTGGGACAAATGAGT----CACATGTAGTGC
GACACTTGTCACAATCTGGGAAGATGGAAGTGACATTTGCAAAGAGTACTATTTTTTCCTGAGGGATTGCAAAGAGTACC
ACTTAATAAGTGATTTTGGAGAACCATTCATCTCGCTTAATGCGAGACATAGAGCTCGCGCTTCGAAACCACTTTTGG-A
AGAAAATAATCTTTCTATTGGGCCGGGCT---------------------------------------------------
---------------------CTCCTTATTAGCAGGGCCGTCTATAGGAGAGAGA-----------------CTACTATT
TGGTTCACAGACTGGGCCTGTTTGATGGCCCAAATCTAGGTTGAAGGTGCCGA--TTTCAACTGGACGCGGCGGGGCGCC
GCGCACGAATCCCATGATCCCATCATCAATACGCTTTCTCGATCCCGCCTCCCATCGGAAAACTAAACTAATCCCACCTC
AACCCAATCTCCTCCACCGCCCGTGGGATCGATCCCTCGGCCCGCCCGCCTCCCTCGGATCGACCAGCACCACCCCGCCG
CGAGACCAGGATCTTGGCGAGCGAGAGCACATGGCGCTGGCGGCGGCGGCGGCCTTGGCGTGGCCGTGCCTGGTGAGTTC
CCACCCCCACCCCCTGTCCCCCCCTCCCCTTTTAACCCCTCCGCCGGGCTTCCTCGGCGGCAATTGCAACAGCACCATGG
AGTTTCTTGGGTTTACGCTCATGGTTGTTGTTTTCTCCTTTCTTTTTCGCCGATCTTGGCAACCGAGCGAGCGGGAATGT
CTGTTGTTCTGTGGCTGACGGGGGAGCTGGCCGGTTGTTTGTGTAGGGTGGGAACTCGCCGGCGTGGATTGACGTGCCGG
AGCGGAGCAAGAGCGCGTTCATGGAGCTGAAGAGGAGGAAGGTGCACCGGTACGTGATATTCAAGATCGACGACAGCACG
GAGGAGGTCGTGGTCGAGAAGACCGGTGCGCCCGGGGAGAGCTATGACGACTTCACGGCCTCGCTGCCTGTGGACGACTG
CCGCTACGCCGTCTACGACCTGGATTTCGTCAGCGACGACAACTGCCGCAAGAGCAAGATTTTCTTCATCTCCTGGTTAG
CCTTGTCTTTCTTGCCCCCTGTTTCTTGTCACCTGTGACTGAATTCAGTTTGGTTACAGAGTTGAAGATTCTGTCT-AGA
TATATTTATTTATTTGCTATGATAATTGTTCAAAAGGATTTATGGTTGTGTTAATTGTGGAAAATAATTTATTGCTATGA
TAATTCTCCAAAAAGATTTATTGCTGTGTTAAACACTTAAACAGCGAAGGGGTGGATACAGAAGCACAGCTTCAGTAAAA
CTGGGGGTGGCTAACCCCAGTCATTGTACAGTCCTTTCAGCTTTCGGTGGTTACTGGTTAGGATGTTCATACGCGTTACA
TGATACTCTGTCCAATAAGCATTATGTTTCAAGCTAACCCAACGGCCAACTTAATTCTCTAATATATCCTACAAAGGAAA
CATTTTATTTTTCCATGTAACCTCGCAAAGATAACAGCAAAGGGACGAATACAAAAGTGCAATTCAGTAACAATGGGGCT
AGCTGACGGCAGTGCACTTGACAATCCTTTTCAGTTATCAGTGGTTAGAATGTTTTTTAGACAAGAATGTTTGTGTACAC
AGTTCACTAGTAATCGTGTATGTGCAATGCACGTGTATATTAGGTAGGATATTAGTTGCACGTTATATTAGGTAAGATGT
ATTAGTTGCACGTTGATATTTGGTAAGATATTAATTAAATTGTAGATTTCATGGGATAGCGTTTTTAAAATTTGATGAAG
TGTCCATGTGG--GATACACATCACTTGCACTGCATGACTATCCATGGATTTTCCATTCATGGTACTGAATACCTGGTTT
TCTGTTTCAATTTTTGTAGGGTATTCTTGTCAGTTGTCAAAAGTAGCTGCTGCTAATTCCTAAGAAGATAACAATATTAC
AGCTGTTCTCTTTCTTTTCAGGTCTCCCGATGATTCTCGCATCCGTGCAAAGACCATATATGCTGTGTCCAGGAATCAAT
TCCGCCACGAGCTCGACGGGGTGCACTTTGAGATCCAGGCAACTGACCCTGACGACATGGACTTGGAAGTTCTGAGGGTC
CGTGCTAATAGAACCTGATAGCTAGGTTGACTCTGCTAGCTTGCTGATACACACCAGTAGCTCAAGATGCGTAGCCTGCT
ACTGAAATGCGGCGCTGGTGCACTGATGTGAAGCATGGTGTATAATCCGGCTGCTGATCACACCTGAGTATGCAGTGTTC
CTTTTTTCAGGAGATAGCATCTCAGTGATATTAATATAGCTAGATAAGTTCCCTATAATATGATGTGGAAACGGCTCCAT
TTAATGTCTAGTTG---ATGTACTATTTGTCTA-TCCTAAGCAACAGTTTTGTTGAGCTTAAACTGCTAGTGCTCAGTGG
TTTTGTTCTGG---------TT-----------TTTTTTTGTAATGAATGTCCAGTGAATCATGCAGTATGATTTGCTAC
TTACAGTGGTGTTGTGCTTGTTCTGCAATTTTTTGTCAGGGTTCTTCTGCTACTCTACTGCTATATTATGCATAGTGAAT
AAGTGTAACTCTGGTATTTCCAGTGT--AAGGAATGGCTGTTGTCATCATGTCCTTTGATGTTTTCCCTGTTTTTTTTTT
ACATTAAAACAGACTTGGCAAACATACAAACATGTTTTTCTTTGTCTTTAGAGAGAGCT--AAATCAAATTCTAACAATA
TTAGCAGTTGTTTTGACTTTCTAATACTATTGTCCTTTTCCCCCACAAGT--TTCCTTGTTGCTTTATCTCAATTATTAT
GTAGTCTGATACAACTTCATGATAATTTCCTTTGCATCACCACATTTATATATACGAAATTTGTTATCGTTTGGCTTTGC
-TTCGATTATGATAA-TCTGCCAGGATTAGGTGTTTTAGACTAGTCGGTGGTTCGT------GCCTTCCCAGAATATTTT
---CTTAAATTGCTA-----------------------------------------------------------------
----------------------------------------------------------------------------
>chr1D_553
--------------------------------------------------------------------------------
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-----------------------------------------------------------GCTTTGAAACCACTTTTTGAA
AGAAAATAATCTTTCTATTGGGCCGGGCT---------------------------------------------------
---------------------CTCCTTATTAGCAGGGCCATCTATAGGCTCT-------TTTATAGCGCCGGCTACTATT
TAGTTCACAGACTGGGCCTCTTTGATGGCCCAAATCTAGGTTGAAGGCGCGGATTTTTCAACTGGACGCGGCGGGGCGCC
GCGCACGAATCCCATGATCCCATCATCAATACGCTTTCTCGATCCCGCCTCCCATCGGAAAACTAAACTAATCCCACCTC
AACCCAATCTCCTCCACCGCCCGTGGGATCGATCCCTCGGCCCGCCCGCCTCCCTCGGATCGACCAGCGCCACCCCGCCG
CGAGACCAGGATCTTGGCGAGCGAGAGCACATGGCGCTGGCGGCGGCGGCGGCCTTGGCGTGGCCATGCCTGGTGAGTTC
CCACCCCCAGCCCTTGTCCGCCCCTCCCCTTTTAACCCCTCCGCCGGGCTTCCTCGGCGGCAATAGCAACAGCGCCATGG
AGTTTCTTGGGTTTACGCTCATGGTTGTTGTTTTCTCCTTTCTTTTCCGCCGATCTTGGCAACCGAGCGGGCGGGAATGT
CTGTTGTTCTGTGGCTGACGGGGGAGCTGGCCGGTTGTTTGTGTAGGGTGGGAACTCGCCGGCGTGGATTGACGTGCCGG
AGCGGAGCAAGAGCGCGTTCATGGAGCTGAAGAGGAGGAAGGTGCACCGGTACGTGATATTCAAGATCGACGACATCACG
GAGGAGGTCGTGGTCGAGAAGACCGGCGCGCCCGGGGAGAGCTATGACGACTTCACGGCCTCGCTGCCTGTGGACGACTG
CCGCTACGCCGTCTACGACCTGGATTTCGTCAGCGACGACAACTGCCGCAAGAGCAAGATTTTCTTCATCTCCTGGTTAG
CCTCGTCTTTCTTGCCCCCTGTTTCTTGTCACCTGTGACTGAATTCAGTTTGGTTACAGAGTTGAAGATTCTGTCTAAGA
TAGATGTATTTATTTGCTGTGATAATTGTTCAAAAGGATTTATGGTTGTGTTAATTGTGGAAAAAGATTTATTGCTATGA
TAATTCTCCAAAAAGATTTATTGCTGTGCTAAACACTTAAACAGCGAAGGGGTGGGTACAGAAGCACAGCTTCAGTAAAA
CTGGGGGTGACTGACCCCAGTCATTGTACAATCCTTTCAGCTTTTAGTGGTTA-------GGATGTTCATACGCGTTACA
TGATACTCTGTCCAATAAGCATTATGTTTCAAGCTCACTCAACGACCAACTTAATTCTCTC--ATATCCTACAAAGGAAA
CATTTTATTTT-CCGTGTAACCTCGCAAAGGTAACAGCAAAGGGATGAACACAAAAGTGCAATTCAGTAACAATGGGGCT
AGCTGACGGCAGTGCACTTGACAACCC-TTTCAGTTTTCAGTGGTTAGAATGTTTTTTAGACAAGAATGTTTGTCTACAC
AGTACACTAGTAATCGTGTGCGTGCCATGCACGTGT------------ATATTAGTTACACGTTATATTAGGTAAGATGT
ATTAGTTGCACGTTGATATTTGGTAAGATATTAATTAAATGGTAGATTTCATGGGATAGCGTTTTTAAAATTCGATGAAA
TGTCCATGTGG--GATACACATCACTTGCACTGCGTGACTATCCATGGATTTTCCATTCATGGTACTGAATACCTGGTTT
TTTGTTTCAGTTTTTGTAGGGTATTCTTGTCAGTTGTCGCAAGTAGCTGCTGCTAATTCCTAAGAAGATAACAATATTAC
AGCTGTTCTCTTTCTTTTCAGGTCTCCTGATGATTCTCGCATCCGTGCAAAGACCATATATGCTGTGTCCAGGAATCAAT
TCCGCCACGAGCTCGACGGGGTGCACTTTGAGATCCAGGCAACTGACCCTGACGACATGGACTTGGAAGTTCTCAGGGTC
CGTGCTAATAGAACCTGATAGCTAGGTTGACTCTGCTAGCTTGCTGATACACACCAGTAGCTCAAGATGCGTAGCCTGCT
ACTGAAATGCGGCGCTGGTGCACTGATGTGAAGCATGGTGTATAATCCGGCTGCTGATCACACCTGAGTATGCAGTGTTC
CCTTTTTCAGGAGATAGCATCTCAGCGATATTAATATAACTAGATAAGTAACCTACAATATGATGTGGAAACGGCTCCAT
TTAATGTCTAGTTGCGCATGTACTATTTGTCTTCTCCTAAGCAACAGTTTTGTTGAGCTTAAACTGCTACTGCTCAGTGG
TTTTGTAATAGTTTCTGTTTTT-----------TTTTTTGGTACTGAATGTCCAATCAATCATGGAGCATGATTTGCTAC
TTACAGTGGTGCTGTGCTTGTTCTGCAATTTTTTGTCAGGGTTCTTCTGCTACTCTACTGCTATATTATGCATAGTGAAT
AAGTGTAATTCTGGTATTTCCACTGTCCAAGGAATGGCTGTTGTCATAATGTCCTTTGATGTATTCCCTG----TTTTTT
ACATGAAAACAGACTTGGCAAATATACAAACCTGTTTTTCTTTGCCTTTAGAGAGAGCT--AAATCGAATTCTCACAATA
TTAGCAGTTGTTTCGAG----------TATTGTTCTTTTCCCCCACAGGTCATTCCTTGCTGCTTTATCTCAATTATTAT
TTAGTGTGATACAACTTCATGATAATTTCCTTTGCGTCACCACATTTATATATACGAAATTTGTTCTCGTTTAGCTTTGC
ATTTGATTATGATAATTCTGCCAGGATTAGGTGTTTTAGACCAATCAGTGCTTCACGCTCACGCCCTCCCAGTTTTTTTT
---CTTAAATTGCTAAAAAACAAGTGCAGTATTTATTTGTGTGTTTCAGAATATGTATACTGAAAGCGTGTC--------
--------AATTTGACTTGTCTCCACGCCAAAGCACAATACTAAACCCAACTGAGTTTATTGGCCA----------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------S--S-----------------
--SSS--------S--------S-----SS-------SS----------S-S---S--SS---------------S----
-----------S-------SS-------S----S-S-SS---SS-------S----S---------SS------------
-----------------------------S----S-SS-----S-------SSS----S--SS-SSSS--------S---
--SS----S----------S--SS---S----------------------------------------------------
---------------------------S---------------------S--S---------------------------
S----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS----S-------------------------SSS-SSSS------SS-------------
--S----------------------------------------------S------------------------------
----------S---------------------------------------------------------------------
------------------S------------------------------------------------S------------
--------------------------------------------------------------------------------
----------------S-SS------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S------S
S-------------------------------------------------------------------------------
-----------------------------------------------S---------S----------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------S---------------S-------------------------------------
-------------------------S----------S-------------------------------------------
---------------------S-----------------------------------S----------------------
-----------------------------------------S--------------------------------------
-----------SS------S--------------------S-----------------------------------S---
-----------------------------------------S---------S----------------------------
--------S------------------------------------------------------------S----------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
----------------------SSSSSSSSSSS------------------S----------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S-----------------------------------SS-------------------
---------------------S-S--------------S-----------------------------------------
--S-----------------------------------------S------S--S-S--------S--S-----------
------------------------------S---------------------SS--------------------------
SSS-------------S--------S-----S----------------------S--S------------S-SSSSSSSS
SSSSSSSS-------------------S---------------------------------S----SSSSSSSSSS
>forward_979
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------C
AACCCAATCTCCTCCACCC-------------------------------------------------------------
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>reverse_2612
--------------------------------------------------------------------------------
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---------------------------------------------------GCGACATGGACTTGGAAGTTC--------
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>forward_2043
--------------------------------------------------------------------------------
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-----------------------CGCGAAGGTAACAGCAAAGC-------------------------------------
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>reverse_3578
--------------------------------------------------------------------------------
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---------------------------------------------------------CACTGAAAGCGTGGCAACC----
----------------------------------------------------------------------------
