>input_sequence_47860
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-ATGGCGGGTGCGCTGGGCGTGAAGGCGACGCCGTTCACCTACGCGGCGCACGCGCTGGGCGCGGCGGCGGCGGCCATGG
TGCTCGTCTGGTGCATCCACTTCCGCGGCGGCCTCGCCCTCGAGGCGGTCAACAAGAACCTCATCTTCAACGTGAGTTGC
CGCTCTGTTTTCTTC---TTCTTTTCCCCTGTAGCAAACCGCCCCCACCGGATAGGCATAGGCTTACGATCGCTTCAGTT
GCAAGTCACATCACCGTGGAAGCTTTAGGAACAGAGATAATTATTCG--ATACCCACCTTGAGGTTGTAGGGAAAAATTA
GTCATCCT------CCCGTATCACATGAATAGCCTAGCCTCAGCTCTAGCTTCGAGCTGTTGGTTTCTTGGCTTGTATCC
GATTGATTCACTGTGCTAAAACGTCTTATAG--------------------------------------------TTAGG
AACAGAGGTAGTAGTATCTAGGGGAGAACCATGCTCGAAATGGGGATCGGGGGTAACAATAAAAAATGCTGCAACTGAGA
AATTCAGCTGCTCCTGAATCTCGATTGCCCTGCAACTAGCTCATGTTCCTTGTCAATGAATGCTCTGGCACTTGTAGATC
AGAAAT----TAATTGGACCCCATAAAATAGCAGTGAGACTTCAAAGCAATGATAAGATTGGACAGAGCACATGGAAAGC
CATCCTATTTTGAATGGTTGGGTACTTGAATATTGGCCTGCTGTTCCAAGCTAGACTTGTCAGGATTTTTTTG-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------TTTAACTTAATTGC-GTTGTTATTCCCAGATAATCAATTATTCATAC------
TTTCTTGTGCTCTAAAATGCAGGTCCACCCTGTTCTTATGCTCATCGGCTTCATTATCCTTGGCAGTGAAGGTAAGGCTA
AAGAACCGTACAAGAATTCCCTGATCTTTTTTTGCCTCTGTTGGTGGTACTGTACAGTGTACACATGTACTAGAAACACA
GATCGGTTAATTTCTCTCAAACAATCCACCCTGGCAGCCATAATGGTCTACAAGGTATTTCCGGGCCTGAGCCACGACAC
GGCCAAGCTGACCCACCTGATCCTCCACGCGATCGCCATCGTCCTCGGCGCCGTCGGGATCTACTGCGCCTTCAAGTTCC
ACAACGAGAGCGGGATCGCCAACCTCTACAGCCTGCACTCCTGGCTCGGGATCGGAGCCATTTCTCTCTACGGAATCCAG
GTAACTCAAACCGACGCCATGGCGTCTAC--------AGCA-TTTGCAGAGTATTCTTCCTGCGAGTCGGCTAATGTGTA
CTCC------ATCTGCAGTGGATATTTGGGTTCGTGACGTTCTTCTTCCCCGGGGCGGCGCCGGACGTGAGGCGCGGGGC
TCTGCCGTGGCACGCGTTGTTCGGGCTCTTCGTCTACGTGCTCACGCTGGCAACGGCGGAGCTCGGGTTCCTGGAGAAGA
TGACGTTCCTGCAGAGCTCCGGGCTCGACAAGTACGGCCCGGAGGCGCTCCTTGTCAACTTCACGGCCCTCGTCGTCGTG
CTCTTCGGCGCCGCCGTGGTCGTCGCTGCCGTCGCTCCTGCGGCTAAGGTGGACGAACCGGAGGGATATGCTCCGATCCC
TGTCATCGGTTAG-------------------------------------------------------------------
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--------------------------
>chr2B_1_TraesCS2B01G386700
ATTGGTTCAGACTTGACATCATGACCGGCAGATAAGGCTTCTCAGTCTGGTACGTGGATCTCGTGCGCGCCCTTCTGTTC
AACTCGGCCGTGTTCACCCGCATCGGCATCGCATGGCACGGCGGGCACCTGCCTCCGCTCACCGCCCCAGTTTGCAGATA
ATTCATTGCAGGTTGCAGCGGTGTGCCCCATCGCAACGACCCCAAATCCTGTTGATGGGACAATCGCGGGAACTCGTTTC
AGCCCGTTACGGACGGAACGGAACAATCATCAATCAACCATGGCAGCCAACGCCCGACGCCCATCTTA--GCAACTCCAT
TGGGGAAAAAATGCCCACTTGGCTTAATCATCAGGTTGTAGCCTTCGTGGCCAGGCAGTATGATCGTGCTCCTGCTTAGT
TGTTACTCCTTGAGCACGCTGTTGCACAGTCGAGCTGCCACCCTACTTCGTGGCCAGGAGTAGTTAATGAAAGTCTGCTG
T--TGCACAGTCGCAAAAAGAAAACCTTGAGCACGCTGCCACCCTCCTTCCATATGGGCCAGAGCGAAAATAAATAAACC
CCCATGGTGCCACCGTCGAGCGACTCCGTTTTGTTTGTTTGTTTACTTGGGAGTT-CCACGGAAGGATGCAAAAATTCAG
ATCGGGCAGGTTAAACCTTCCCGTCAAATCCCATCC--ACCTCTCCAGATCCACGCATGGATGAAGACGCCTTCCCGGCC
TTGACAGCATCCGCCCTATT------CAGGCTCAGCACCAAACCCGAGTCGTCCACACACCACATCAACAAAACACGAAC
CGAAAGAGGCGAAAGCAAAAGCCAAGACTCGGCTTTCCTCTCG-------CTAGCTGCTCTCTG--CTCTAGGCCGTGCG
CAGGGCACACGCTTCTCCTCACTCCCCCGTCTTTCGTCGTGCCTTGATCGAGGCCAGCTGCTTCTAGCCGGCCTGACAGA
TAGAGAGTGAGCCAAGCTACCCCTGCCGGGGACCAGAGGAGGAAGAAGGAAGGC-------------------AGGGCGA
GATGGCGGGTGCGCTGGGCGTGAAGGCGACGCCGTTCACCTACGCGGCGCACGCGCTGGGCGCGGCGGCGGCGGCCATGG
TGCTCGTCTGGTGCATCCACTTCCGCGGCGGCCTCGCCCTCGAGGCGGTCAACAAGAACCTCATCTTCAACGTGAGTTGC
CGCTCTGTTTTCTTC---TTCTTTTCCCCTGTAGCAAACCGCCCCCACCGGATAGGCATAGGCTTACGATCGCTTCAGTT
GCAAGTCACATCACCGTGGAAGCTTTAGGAACAGAGATAATTATTCG--ATACCCACCTTGAGGTTGTAGGGAAAAATTA
GTCATCCT------CCCGTATCACATGAATAGCCTAGCCTCAGCTCTAGCTTCGAGCTGTTGGTTTCTTGGCTTGTATCC
GATTGATTCACTGTGCTAAAACGTCTTATAG--------------------------------------------TTAGG
AACAGAGGTAGTAGTATCTAGGGGAGAACCATGCTCGAAATGGGGATCGGGGGTAACAATAAAAAATGCTGCAACTGAGA
AATTCAGCTGCTCCTGAATCTCGATTGCCCTGCAACTAGCTCATGTTCCTTGTCAATGAATGCTCTGGCACTTGTAGATC
AGAAAT----TAATTGGACCCCATAAAATAGCAGTGAGACTTCAAAGCAATGATAAGATTGGACAGAGCACATGGAAAGC
CATCCTATTTTGAATGGTTGGGTACTTGAATATTGGCCTGCTGTTCCAAGCTAGACTTGTCAGGATTTTTTTG-------
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---------------------------TTTAACTTAATTGC-GTTGTTATTCCCAGATAATCAATTATTCATAC------
TTTCTTGTGCTCTAAAATGCAGGTCCACCCTGTTCTTATGCTCATCGGCTTCATTATCCTTGGCAGTGAAGGTAAGGCTA
AAGAACCGTACAAGAATTCCCTGATCTTTTTTTGCCTCTGTTGGTGGTACTGTACAGTGTACACATGTACTAGAAACACA
GATCGGTTAATTTCTCTCAAACAATCCACCCTGGCAGCCATAATGGTCTACAAGGTATTTCCGGGCCTGAGCCACGACAC
GGCCAAGCTGACCCACCTGATCCTCCACGCGATCGCCATCGTCCTCGGCGCCGTCGGGATCTACTGCGCCTTCAAGTTCC
ACAACGAGAGCGGGATCGCCAACCTCTACAGCCTGCACTCCTGGCTCGGGATCGGAGCCATTTCTCTCTACGGAATCCAG
GTAACTCAAACCGACGCCATGGCGTCTAC--------AGCA-TTTGCAGAGTATTCTTCCTGCGAGTCGGCTAATGTGTA
CTCC------ATCTGCAGTGGATATTTGGGTTCGTGACGTTCTTCTTCCCCGGGGCGGCGCCGGACGTGAGGCGCGGGGC
TCTGCCGTGGCACGCGTTGTTCGGGCTCTTCGTCTACGTGCTCACGCTGGCAACGGCGGAGCTCGGGTTCCTGGAGAAGA
TGACGTTCCTGCAGAGCTCCGGGCTCGACAAGTACGGCCCGGAGGCGCTCCTTGTCAACTTCACGGCCCTCGTCGTCGTG
CTCTTCGGCGCCGCCGTGGTCGTCGCTGCCGTCGCTCCTGCGGCTAAGGTGGACGAACCGGAGGGATATGCTCCGATCCC
TGTCATCGGTTAGTAGCATCCTAG---TAGGTGGCTACGTGCTACTGATCGTCGAAC------GTCCAGATAACACACCG
CGTGTGCGATTGGTTCCACGAGATCGGGTGTAAGCACAGAATTCACGTCTGATTCGTGTGTATCAGCTGAACCGTACGAT
TTGATTACTGAAAACTGCACTGGTACCTTTGAATGATCATGATATTTTTTATTTTTATTTTGAAAAGGGGAACAT-GCCT
GACCTCTGCAACAGAATGATGCATACGACCATTTTATTTAAACGAAACAAAGTGACACAAGGTCTCTAATCCAGTACAGC
TCACAGCGGGAGCAAGACTCAAACATGAAAATCTA-AAAATAACGGAATGCCACAACCGAGAAAG-ATAGGACTAAGATG
ACTAAACACCTATCCTATTAGTGTATC----GCCATCCAAACCGGTTATAC--ATATCCCATGTTACCGTCGATTACTGG
TTGCACCCAGTAACCAAAAGCTTCCCGCAGACCGT---------------------ACAGATCCAAGTAGCAGCTCTGAA
GACAATCTGCAAAAGAAAAAA----------TCTATTAAAAAGCATATCATTTCTGCAGTTACATATAGCCCATAGTAAT
GCGCATATTCCTATCCGG----GTTCCACATTAATAGGCTCCACCCCAGTTAGCCATGTCCCAAACAACATGTCAATGCT
AATTGGCGGGATTATGCTAAAGGCTATATGAATCGTGTGCCAAAGGAGCTTGGCTAGGGGGCAGTCAATGAAAAGATGTT
GAATTGTTTCATCCTGGTCACAAAAACAACATCGAGGACTACCAACCCATCTTCGCCTAAAAAAATTATCCTTTGTAAGA
ATCACTTCCTTGTGGACAAACCACATGAAAACCACATGAATGATCATGATATGGCTTGATGAGTTGATTGTTTTTATAAA
AGGACGTTTTATGTCGACTCATAATGTAGCAAACATCAAAGATACAAATACAATTAGCACACAAAGGGCATATGTATGAT
TAGGATGCACATGTGCAATAGGCTTT
>chr2D_60
-----------------------------------------------------------CTCATGCGCGCCCTTCCGTTC
AACTCGGTCGTCTTCACTCGCATCGACATCGCATCACACGGCGGGCTCCTGCCTCCGCTCACCGCCACAGTTTGCAGATA
ATTCCA------TTGCAGCGCTCTGCCCAGTCGCAACGACCCCATATCCTGTTGACGGGACCATCGCGGGAACTCGGTTC
AGCCCGTTACAGACGGAACGGATCAATCATCAATCAACCATGGAATCCAACGCCCGACGCCCATCTTACAGCAACTCCAG
TGAA-AAAAAATGCCTACTTGGCTTAATCATCAGGTTGTAGCCATCGTGGCCAGGCAGTATGATCGTGCTCCTGCTTAGT
TAATTAACGGAAAGTCTT---------------------------------------------------------TGCTA
CACTGCACAGTCGCAAAAGGAAAACCTTGAGCACGCTGCCACCCTCCTTCCATATGGGCCAGATCAAAAATAAATAAACC
CCCACGGGGCCACCGTCCAGCGACTCCGTTTTG----------------GGAGTT-CCACGGAAGAATACAGAAACGCAG
A-CGTGCAGGTAAAACCTTCCCGTCAAATCCCATCTG--CCTCTCCAGATCCGCGCATGGATGAAGACGCCTTCCCGGCC
TTGTCAGCATCCGCCCTATAGCTCAGCACC----------AACCCGAGTCGTCCACACACCACATCAACAAACACGAAGC
G-GAAGAGGCGAAAGCAAAAGCCAAGACTCGGCTTTCCTCTCGCTCGCCGCTCGCTGCTCTCTGCTCTCTAGGCCGTGCG
CAGGGCACACGCTTC-CCTCACTCCCCCGCCTTTCGTCGTACCTCGATCGAGGCGA-------------------GCTGA
TAGGGAGTGAGCT-----ACCCCTACGGA-------AGAAGGAAGAAGGAAGGCACACAAGTTCGTGTGCAGCAGGGCGA
GATGGCGGGCGCGCTGGGCGTGAAGGCGACGCCGTTCACCTACGCGGCGCACGCGCTGGGCGCGGCGGCGGCGGCCATGG
TGCTCGTCTGGTGCATCCACTTCCGCGGCGGCCTCGCCTTCGAGGCGGTCAACAAGAACCTCATCTTCAACGTGAGTCGT
CGCTCTGTTTTCTTC---TTCTTTTCCCCTGTTGCAAACCGCCCCCGTCGGATAGGCATAGGCTTACGATCGCTTCGGTT
GCAAGTCACATCACCGTGGAAGCTTTAGGGACAGAGATAATTATTCG--ATACCTGCCTTGAGGTTGTAGAG-AAAATTA
GTCACCCT------CCCGTGTCAGACGAATAGCCTCGCCTCTGGTCTGGCTTCGAGCTGTTGGTTTCTTGGCTTGTGTCC
GATTGATTCACTGTGCTAAAACGTCATACATTTAGGAACATAGGTAGTAAATTAAACTGATAAAACGTCTTACATTTAGA
AACAGAGATAGTAGTATCTAGGGGTGAACCATGCT-GAAATGGGGATCGGGGGCAACAATAAAAAATGCTGCAACTGAGA
AATTCAGCTGCTCTTGAATCTCGATTGCCCTGCAGCTAGCTCATGTTCCTTGTCAATGAATGTTCTGGCACTTGTAGATC
AGAAGTTATATAACTGGACCCCATAAAATAGGGGCGAGACTTCAAAGC-ATGATAAGATTGAACAGAGCACATGGAAAGC
CATCCTGTGTTGAATGGTTGGCTACTTGAATATTGGCCTGCTGCTCCAAGCTAGACTTGTGAGGATTTTTTTTTGTTTAA
ATTATCCTCAGATTTATATTTCGCGTACTAGTGCAAGTTTTGCTGGAGCGTCTGACTTTTTGCACACGAGCCTAATTAAA
TTCTCTGCCCCTTTGCCTGTCAGCCCCGATCGGATCACTGAAAAAACAG--------TGATTGATGCTGTTTTCTCATTA
TGTTTTTATGGCCTCAGCGTGACATAATTTGACTTAATTGCAGTTGTTATTTCCAGATAATCAATTATTCATAT------
TTTCTTGTGCTGTAAAATGCAGGTCCACCCTGTTCTTATGCTCATCGGCTTCATTATCCTTGGCAGTGAAGGTAAGGCTA
AAGAACCGTACAGGAATTCCCTGATCTTTTTTTGCCTCTGTTGGTGGTACTGTACAGTGTACATGTACTAG---AACACA
GATCGGTTAATTTCTCTCAAATAATCCACCCTGGCAGCCATCATGGTCTACAAGGTATTTCCGGGACTGAGCCACGACAC
GGCCAAGCTGACCCACCTGATCCTCCACGCGATCGCCATCGTCCTCGGCGCCGTCGGGATCTACTGCGCCTTCAAGTTCC
ACAACGAGAGCGGGATCGCCAACCTCTACAGCCTGCACTCCTGGCTCGGGATCGGAGCCATTTCTCTCTACGGAATCCAG
GTAACTCAAACCGGCCGTTGCCATGGCCTGCACATGGAGGA-TTTGCAGAGTTTTCTCCCGGCGGATCGGCTAATGTAAT
TGTGTGCTCAATCTGCAGTGGATATTTGGGTTCGTGACGTTCTTCTTTCCCGGGGCGGCGCCGGACGTGAGGCGCGGGGC
TCTGCCGTGGCACGCGCTGTTCGGGCTCTTCGTCTACGTGCTCACGCTGGCGACGGCGGAGCTCGGGTTCCTGGAGAAGA
TGACGTTCCTGCAGAGCTCCGGGCTCGACAAGTACGGCGCGGAGGCGCTCCTGGTCAACTTCACGGCCCTCGTCGTCGTG
CTCTTCGGCGCCGCCGTGGTCGTCGCTGCCGTCGCTCCCGCGGCTAAGGTGGAGGAGCCGGAGGGATATGCTCCGATCCC
AGTCATCGGTTAGTAGCATCCTAG---TACGTGGCTACGTGCTACTGATCGTCGAAA------GTCCAGAAGCGAGACCG
CGTGTGCGATTGGTTCCACGAGATCGGGTGTAAGCACAGAACTCACGTCTGATTTGTGTGTATCAGCTGAACCGTACGAT
TTGATTACTGAAAACTGCAGTGGTACCTTTGAAAGATCATGA--------------------------------------
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>chr2A_468
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----------AAAGTCTT---------------------------------------------------------TGCTA
T--TGCACAGTCGCAAAAAGAAAACCTTGAGCACGCTGCCACCCTCCTTCCATACGGGCG-GAGCACAAATAAGTAAACC
CCCACGGGGCCACCGTCCAGCGACTCCGTTTTG----------------GGAGTTCCCACGGAAGGATACAGAAATGCAG
A-CGTGCAGGTAAAACCTTCCCGTCAAATCCCATCTATACCTCTCCAGATCCACGCATGGATGAAGACGCCTTCCCGGCC
TTGTCAGCATCCGCCCTATA------CACC----------AACCCGAGTCGTCCACACACCACATCAACGGACCCGAAGC
C-AAAGAGGCGAAAGCAAAAGCCAAGACTCGGCTTTCCTCTCGCTCGCTGCTCGCTGCTCTCTG--CTCTAGGCCGCGCG
CAGGGCACACGCTTCTCCTCACTCCCCCGCCTCTCGTCGTGCCTCCATCGAGGCGAGCTGCTTCCAGCCGGCCAGGCAGA
CAGAGAGTGAGCC-----ACCCCTGCCCGGGACCAGAGGAGAAAGAAGGCAGGC-------------------AGGGCGA
GATGGCGGGCGCGCTGGGCGTGAAGGCGACGCCCTTCACCTACGCGGCGCACGCGCTGGGCGCGGCAGCGGCGGCCATGG
TGCTCGTCTGGTGCATCCACTTCCGCGGCGGCCTCGCCCTCGAGGCCGTCAACAAGAACCTCATCTTCAACGTGAGTCGT
CGCTCTGTTTTCTTCTTCTTCTTTTCCCCTGTTGCAAACCGCCCCCGTCGGATAGGCACAGGCTTACCATCGCTTCAGTT
GCAAGTCACATCACCGTGGAAGCTTTAGGGACAGAGAGAATTATTCGGTATACCTCCCTTGAGGTTGTAGGGAAATATTA
TTCTTCACCCCGGCCCCGTATCACATGAATAGCCTCGCCTCAGCTCTGGCTTCGAGCTGTTGGTTTCTTGGCTTGTGTCC
GATTGATTCACTGTGCTAAAACGTCTTACATTTAGAAACGGAGGTGGTAAACTGAACTGTTAAAACATCTTACGTTTTGG
AACAGAGGTAGTGGTATCTAGGGGAGAACCATGCTCGAAATGGGGATCGGGGGG-ACAAGCAAAAATGCTGCAATTGAGA
AATTCAACTGCTCTTGAATCTCGATTGCCCTGCAGCTAGCTCATGTTCCTTGTCAATGAATGTTCTGGCACTTGTAGATC
AGAATT----TAATTGGACCCAATAAAATAGCGGTGAGACTTCAAAGCG-TGATAAGATTGGACAGAGCACGTGGAAAGC
CATCCT--------------------------------------------------------------------------
--TATCCTCAGATTTATATTTCGGGTACTAGTGCAAGTTTT-------------------TGCACAGGAGCCTAATTAAA
TTCTCTGCCCTCTTGCCTGTCAGTCCCGAAAGGATCACTGAAAAACCCAGACTGGGTTGATTGATGCTGTTTAAATTAGG
ATTTATGGCCGTAGT---GTGGCATAATTTAACTTAATTGCCGTTGTTATTTCGAGACCATCAGTTCAATTGTTCATATT
TTTCTTGTGCTGTAAAATGCAGGTTCACCCCGTTCTTATGCTGATCGGCTTCATTATCCTTGGCAGTGAAGGTAAGGCTA
AAGAACCGTACAAGAATTCCCTGATCTTTTTTTGCCTCTGTCGGTGGTACTGTACAGTGTACACATCTACTAGA-ACACA
GATCGGTTTA-TTCTCTCAAATAATCCGTCCTGGCAGCTATAATGGTCTACAAGGTATTTCCGGGACTGAGCCACGACAC
GGCCAAGCTGACCCACCTGATCCTCCACGCGATCGCCATCGTCCTCGGCGCCGTCGGGATCTACTGCGCCTTCAAGTTCC
ACAACGAGAGCGGGATCGCTAACCTCTACAGCCTGCACTCCTGGCTCGGGATCGGAGCCATTTCTCTCTACGGAATCCAG
GTAACTCGAACCGGCCGTTGCCATGGCCTGCGCATGCAGGATTTTGCAGAGTTTTCTTCCGGCGGATCGGCTAATGTAAG
GTGTGCTCG-ATCTGCAGTGGATATTTGGGTTCGTGACGTTCTTCTTCCCCGGCGCGGCGCCGGACGTGAGGCGCGGGGC
TCTGCCGTGGCACGCGCTCTTCGGGCTCTTCGTCTACGTGCTCACGCTGGCCACGGCGGAGCTCGGGTTCCTGGAGAAGA
TGACGTTCCTGCAGAGCTCCGGGCTCGACAAGTACGGCCCGGAGGCGCTCCTCGTCAACTTCACGGCCCTCGTCGTCGTG
CTCTTCGGTGCCGCCGTGGTCGTCGCTGCCGTCGCTCCCGCGGCTAAGGTGGAGGAGCCGGAGGGATATGCTCCGATCCC
AGTCATCGGGTAGGAGCATCCTAGTACTACGTGGCTACGTGCTACTAATCGTCGAAGTCGAACGTCCAGAAGCGAGACCG
CGTGTGCGATTGGTTTCACGAGATCGGGTGTAAACAC-------------------------------------------
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>chr2D_2759
ATTTATTCTTTTTT------------------------------------------------------------------
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---------------------------------------------------------TTTGGAAAAGGAGGACAT-CCCC
GGCCTCTGCATCAGAATGATGCATGCAGCCATTTTATAAATACGAAACAAAGTAAAACCAAGTCTGCAATCCAGTACAGC
TCGCAAAAGGAGCGAAAATCAACCTGAAAAAACTG-AAAATAACAGCAAGCCACAACTGACAATTCATAGGACT-CAATG
ACTGAACACCTATCCTATTAGTGGACC----GCCATCCAAACCGGTTGAAG--ATATCCCGTGCTACCATCTCCCACCGG
TTGCACCCAGTAACCAAAAGCTCCCTGCAGTCCGTATGAGTGAGTAACGACCATGTACGGATCCAAGCAGTAGCTCAGAA
GATAACCTGCAAAA-AATTAATGAAGTTTTTTCTATTAAAGATCATATCATTTCTGCAGTTCCATATAGCCCATAGTAAT
GCGCATATTCCTATCCGAATACGTCCCGCAGTAATTGGGTCCACACCAGTTAGCCATGTCCCAAACAACATGGCAATGCT
AGTTGGAGGTCTAATGTTAAAGGCTATATGAATCATGCGCTATAGGATCTTGGCTAGGGGGCAGTAAATGAAGAGATGTT
GTATTGTTTCATCCCGGACACAAAAACAACATCGAGGGCTGCCGACCCATCTTCGCCTCAGAAGATTATCCTTAGTGAG-
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--------------------------
>chrUn_2766
ATA--------TTT------------------------------------------------------------------
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---------------------------------------------------------TTTTGAAAAGGTGGACAT-CCCT
GTCCTGTGCATCAAAATGATGCATACGGCCATTTTATTTAAACGAAACAAAGTGACACAAGGTCTGAAATCCAGTATAGC
TCACAGCAGGATCAAGACTCGAAAATGAAAATCTG-AAAATAACTTAAAGCCACAACCAGCTAAACATAGGACT-AGATG
GCTAAATACCTATCCCATTAGTGGACG----GCCATCCAAACCGCTTGTATATATATCCCGTGCTACCGTCTCCCGCTGA
TTGCACCCAGTAACCAACAGCTCCCTGCAGTCTGTATGAGTGAGTAACGACCACGTACGGATCCAAGCAGTAACTCTGAA
GATAACCTGCAAAAAAATTAATAAAGTTCTTTCTATTAAAAATTATATCATTTATGCAGTTCCATATATCCCAGTGTAAT
GCGCATATTCCTATCCAGATACGTCCCGTGATAATAGGCTCTACCCCAGTTAGCCATGTCCCAAACAACATGTCAATGCT
AATTGAAGGGTTAATGTTAAATGTTATATGAATCATGCACCAGAGGAGCTTGGCTAGGGAGCAGTCAATGAAGAGATGCT
GAATTGTTTGATCTTGGTCACAAAAACAACATCGAGGACTACCAACCCATCTTCACCTCAGAAAATTATCCGTCGTAAGA
ATCACCTCCTTATGGACAAACCACATGAAAA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>chr4A_2766
ATTTTT--------------------------------------------------------------------------
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----------------------------------------------------------TTTTAGAAGGAGGACATCCCAC
GGCCTCTGCACCAGAACAATGGATGCAGCTATTTTATTAAACAGTGCCAAAACAAAACAAAGTCGGCAATTCAGTACATC
TCATGGAAGGAGCGTA----------AAATAAATT-AAAATAAAAGAAGGCCACAAATAGCGAAAAACAGGACA-AGATG
A-TAAACACCTATCCTATTATTGGACC----GCCATCCAAACCGGTTGTAA--ATATCCCATGCTACTATCTCCCACCGG
TTGCACCCAGTAACCAAAAGCTCCCTGTAATCCATATGAGTGAGTAACAACCACATACGGATCCAACTAGTAGCTCTGTA
A--AATCTGCAAAA-AGTTTATAT--TTTTT--TATTAGAGATCATATCATTTCTGCAGTTCCATATAGCCCAAAGTAAT
GCGCATATTCCTATCCGAATACGTCCCGCAGTAATTGGCTCCACTCTAGTTAGCCATGTCCCAAACAACATGTCAATGCT
AATTGGAGGGTTAATTTTAAAGGCTATATGAATCATGCGCCAAAGAAGGTTGGCAAGAGG-CAGTCGATAAAGTGGTGTT
GTATTGTTTCATCCTGGTCACAAAAACAACATCAATATCTACACACCCACCTATGCTTTACCAGATTATCTTTGGTTAGA
GTCACTTCCTTGTGGACAAACCACATGAA---------------------------------------------------
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--------------------------
>chr4D_2768
TTTT-T--------------------------------------------------------------------------
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----------------------------------------------------------TTTGAGAAGGAGGACATCACAC
GGCCTCTGCATCAGAATGATGCATGCAGCCATCTTATTAAACAGTGCCAAAACAAAACAAAGCCTGCAATTCAGTACATC
TCACGGAAGGAGCATA----------AATTAAATT-AAAATAAAATAAGGCCACAAACGGCGAAAAATAGAACA-AGATG
A-TAAACACTTATCCTATTACTGGACC----GCCATCCAAACCGGTTGTAA--ATTTCCCGTGCTACCGTCTTCCACCGG
TTGCACCCAGTAACCAAAAGCTCCCTGTAATCCATATGAGTGAGTAACAACCACGTACGGATCCAAGCAGTAGCTCTGTA
A--AACCTGCAAAAAGTTTA-TAT--TTTTTTCTGTTAGAGATCATATCATTTCTGCAGTTCCATATAGCCTAAAATAAT
GCGTATATTCCTATCCGAATATGTTCCGCAGTAATTGGCTCCACTCTAGTTAGCCATGTCCCAAAAAACATGTCAATGCT
AATTGGAGGGTTAATATTAAAGGCTATAAGAATCGTGCGTCAAAGAAGCTTGGCGAGAGGGCAGTCGATAAAGAGGTGTT
GTATTGTTTCATCCTGGTCACAAAAACAGCAACGATAACTACCCACCCACCTACGCTTTACCAGATTATCATTGGTTAGA
ATCACTTCCTTGTGGACAAACCACATGAA---------------------------------------------------
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--------------------------
>chr5B_2785
GA------------------------------------------------------------------------------
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-----------------------------------------------------------------------ACATCCCCC
GGCCTCTGCATCAGAATGATGCATATGGCCATTTTATTTAAATGAAACAATGTGACACAAGGTCTGAAATCCAGTACAGC
TCACATGAGGAGAAAGAAGCAAAAATGAAAATTTGAAAAATAACAGAAAGCCACAACCAGCAAAAAATAGGACT-AGATG
ACTAATCACCTATCCTATTAGTGGACCATACGTCATCCAAACCAGCTGTAA--ATATGTCGTGATACCGTCTCCCACCGG
TTGCACCCAGTAACTAAAA-CTCCCTGCAGTCCGTATGAGTGAGTAACGACCACGTACGGATCCAAGCAGTAGCTCTGAA
GATAACCTGCAAAAAAAATGATAAAGTTTTTCCTATTAAAAATCTTATCATTTCTGCAGTTCCATATAGCCCATAGTAAT
GTGCATATTCCTATCCGGATACGTCTTGCATTAATAGGCTTCACCCTAGTTAGCCATGTCCCAAAGAACATGTCTATGCT
AATTGGAGGGTTAATGTTGAAGGCTATATGAATCGTGCGCCAGAGGAGCTTGGCTAAGGGGCAGTCAATGAGGAGATGTT
GAATTGTTTCATCCTTGTTACAAAAACCACATCGAGGACTACCAACCCATCTTTGCCTCAGCAAATTATCCTTCGTAAGA
ATCACTTCCTTGTGGACAAACCACATGAAAA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------
>SNPs
---SS---SSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S------------S----
-------S---S-----S-------S--------SS----------S-------------------S-------------
----SSSSSSSS--------S-S-----SS--------------S----------S-----S--------------S---
----------S-----------S--------------------S-S---------------------------------S
--SSS----------S---------------------------S------------------------------------
-SS-SSS-SSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S
-----------------------------------------------------------------S--------------
----S--S---------S---------------SSSSSSSSSSSSSSSS-------------------S--S----S---
-S--S------S-----------------------S--------------------------------------------
---S---------------S--------SSSSSSSSSSSS--------------------------------S-SSS-S-
-S--------------------------------------------------S---------------------------
-----------------------------S--------------S---------S---------S--------S-S----
-------------SSSSS--------------------------------------------------------------
---------S----------------------------------------------------------------------
-----------------------------------------------------------------------------S-S
--------------------------------S-------------SS--------------------------------
-----------------------------S------------------------SS------------------------
-----------------------------------S-----------S----------------------------S---
----------------------------S-S-------------------------------------------------
-----------------------------------------------------S--------------------------
-------------S--------------------S---------------------------S-----------------
----S---------------------------S---------------S-------------------------------
------S-S------------S---------------------S----------------S-----------S-------
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---------------------------------------------------S---------------------S------
-----------S--------------------------------------------------------------------
------------------------------------------------------------------S-------------
---------------------S-------------------------------------------S--------------
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--------------------------------------------------------------------------------
-------------S-SSSSSSSSSSSSSS----------S------------S-------S---SS-----------SSS
S-SS----------------------------------------------------------------------------
----------------S----------------------------------S----------------------------
----------------------------------------------------S---------------------------
--------------------------------------S--------------S--S-----------------------
S----------------------------S--------------------------S-------------SSSS-S----
-----------------------------------------S------------S-------------------------
-------------------S-------------S--------SSSSSSSSSSSSSSS-----------S-S-----S---
-S--------S----------------S-------------------------------------SS-------------
-------S--------------------------S---------S---S-----------S---S---------S-----
-----------------------S-S---------------------S--S------------S-------SSSS-----
----------------------S--S----S---------------------------S-----------S---------
--S-----------S---S-----------------------S------------------S------------------
---------------------------S----------------------------------------------------
------S---S-S---S--------------------S----------------------------------S-------
----------------------------------------------------------S-S------------S------
-------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_38
------------------TCATGACCGGCAGATAAGGC------------------------------------------
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>reverse_1614
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-------------CTGAATCTCGATTGCCCTGC-----------------------------------------------
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>forward_39
-------------------CATGACCGGCAGATAAGGCT-----------------------------------------
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>reverse_2854
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-----------------------------------------------------CGAACCGGAGGGATATGCTC-------
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>forward_41
---------------------TGACCGGCAGATAAGGCTTC---------------------------------------
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>reverse_2857
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--------------------------------------------------------ACCGGAGGGATATGCTCC------
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>forward_749
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---------ACAGCATCCGCCCTATTCAG---------------------------------------------------
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>reverse_3111
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----------------------------------------------------------------------AACATGCCTG
ACCTCTGCAA----------------------------------------------------------------------
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--------------------------
