>input_sequence_47857
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----------------------------------------------------------------ATGGGGCGCGCCATGC
GGTGGCTCAAGAAGCTGCTCACCGGCGGCGGCGGCAAGAAGGAAGGGGCCAAGGACCAGAGCGCCGCCGCGCCGCCGGTC
GAGAGGAGGAGATGGAGCTTCGCCAAGGCCAGGAGCAGCGTCGCCGACGCCAGCCGCAGGCCTTCCGTCACCGCCGTGGT
CGCCGGCGAGCTCTCTCAGTCTCAGGCGAGGCCGTGCGGGTGCGGCCAGGCGCGCGAGACGGAG------GCCGCCGTCT
TGATGCAGAAGGCGTTCAGAGGGTACCTGGTACGACCCTGTCCATGCTTCTCTC--GCGGTTCTTCTTTTCCTTAGTCTC
TCAC--ACAAACATCAGACTGAATTTTGCGATGAACACACGTACGTTTGAAGATTTACCAGGCCATTTTTTAGCCATTTC
ATTTGTATCATCTCTTGACAGATTAACAGTTGTAGACCGGCATGGAATGGGTAGATGAATAGGTGAAAGGCATATTGGTA
GATTCCTCTGCATCTGC----------------------------------------------------TGCCTTCTCGT
TAGCAACTGCTCATTCT---TTAATCTGCTGCTCCTGCTGCCGCTTAGAATTTGTTTATGTTTATTCGCACAGTTGTGCA
CGCCGTGACACAAGCCTAGTCGGTGCAGTCGTCATCATCACAGTTATTAAACCTATCAAGCACTAAAGAAATGTATAAAG
AAGAAGTGTGT-------------------------------AAAGATTTGAAATTTGTAC---CGCGACCGGCAGGCCA
GGAAGGCTCTCCGCGCCCTCAAGTCGCTGGTGAAGCTGCAGGCCCTGGTGCGCGGCTACCTGGTGCGGAAGCAGGCGGCC
ACGACGCTGCACCGGCTGCAGGCGCTCATGAGGCTGCAGGCCTCCTCGCAGGCCCTCAAGAACCTC---TCCTCCCGGAG
GTCCATCCAGCAGGTCCAGTCCGCCAGAATTCCTTCTCGCCGTGCATCG------------------TGAACCGCATTTC
GTCTG-----TGAAAATGAAGCTGAAAATTTGACGCTTGGTTGTG------TGTTGTTGCGTAGGAGCGGAAGACGTCGG
TGCCGGTGGCGCACCGCCGGAGGCTGTCGGAGGGCGGCGCCGGGGACGACCGCAGCCCCCGGATCGTGGAGATGGACACG
TGCCAGCTGCGGTGCCGGTCGTCGCGGATCGCGGGCCGGTACGCGGCCGCCGACCCG------CAGGCGCCGCCGATCTC
CTCGCCGCTCGCCTACTTCTGCAAGCCGCCGTCGCGGCTGCAGGTGCGGGAGCTGGAGCCGCGGCAGCCCAAGACGACGC
AGAACACGCCCCGCCTCCCGGCCATCGTGCCCGGCGGATCGCCGGCGAAAGCCCGGCCCTCGTGCGGCGGCGGGGGCGGG
CGGGAGTCGAGCAGCCCGCGGTACATGGCGGACACGGCCTCGTCCGTGGCGAGGGGCCGGTGCCAGAGCGCGCCGAGGCA
GCGGCACGGCAGCAACAACCCCGCCT------------------TGGCGCGCGGCGGGTCGAGGAAGGCGGCGCCGCAGC
CGCAGTCGCAGGACAGCTTGAGCTTCAAGAGCTCGGAGGCGTGCAGCCGCGTGGAGGACTACTCCGAGATGAGCGACGAG
GTGACCAGGGACTACTACCTCGACCAGCTCTGGTGA--------------------------------------------
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>chr1D_1_TraesCS1D01G344200
TCCACGATCTCGTCCCGTGTACCCATCCCATCCCATCTATCCCATCTA---------CAAGCCCCGCCGGAAATATAATC
ATTCGCAGGATCGGGATCTTGGCGTGAGCTGGTGGCCGCA---------CCCGCCCCAAAAGCCGCGCCAGCCACCCC--
--------CGGGAGCGGGACGACGACGACGACCGC------------------AGCGGCGACGAGAGTTTTGAGGCGGGC
GAGGTGAGATACAA---GTCATGATTGCGTTGCAAGCTCCCTCCTGGTTTTTCTTTCTTCTTCCCCACCGCCGTTGGTTT
CTTCTTTCTCGCGTCTCGTTTTGCTCGTGCC---------------TCCTTTGTTGCGTTGCGCCCGGCCTCGTCGTAGA
CAAGCCGGGGGAATCTTTTTCACATCCCTGTTGCTGCTTGTGCGT--GGTCACAGGTCACAGGCGAGGCGAGTGAGAACA
CGCGTCCGCTCCCATCTCCCACCTTCCC-----------C---------CTTCTCTTCTTCGCTCCTTCTCTGCCGCTGC
--TTTTTAC-----GGTTCGTTCGTTT-------GGGTGGGTGGGT--GGCTTTGCTTGCCTGAAAAGCTCGTCCGGGGA
AAA-GGTTTCCTCTTCCGGGCTTCACCTAGGTCG--------------------------CTTCCACTGATCCAACTGCC
ATCCCCCACGTCCCACCCACCAACTCCGCTGCTAGCCCGCCAGCTGCTGCCGCCGTTCTTGGCGCTACGCCGCTGGCTCT
TTTCTGCTCGGCCGTGTTCGGCTTCCTCTT-------------------------------------CCTCTCTAAAAGG
TTTCTCCTCCTTTACCTCCCGACGAGAAAGCGACACAAACTTATCTTTTGGGGTGGTTC--AGTCAATGCTTTTGCTTTC
TTCCTCAACCTTCT-CCCGTTTCAGTTTCAACCTGCTCCCGTAGCTTCCGGCCTCTTGTTTACGCACGCTGTTTCAAGTT
TCGACTCCCCCGCAGGTCGACGCC---------ATCTCCTCTGTTCTTGCGGTTGGTCGTACCTTTTTGTGTGTTCTTCT
TGCCGAA------TCTTGACGCGTCCTTCTTCGCGCAGGTAGGAACAGGATCGGTCGTCGCGCCATGGGGCGCGCCATGC
GGTGGCTCAAGAAGCTGCTCACCGGCGGCGGCGGCAAGAAGGAAGGGGCCAAGGACCAGAGCGCCGCCGCGCCGCCGGTC
GAGAGGAGGAGATGGAGCTTCGCCAAGGCCAGGAGCAGCGTCGCCGACGCCAGCCGCAGGCCTTCCGTCACCGCCGTGGT
CGCCGGCGAGCTCTCTCAGTCTCAGGCGAGGCCGTGCGGGTGCGGCCAGGCGCGCGAGACGGAG------GCCGCCGTCT
TGATGCAGAAGGCGTTCAGAGGGTACCTGGTACGACCCTGTCCATGCTTCTCTC--GCGGTTCTTCTTTTCCTTAGTCTC
TCAC--ACAAACATCAGACTGAATTTTGCGATGAACACACGTACGTTTGAAGATTTACCAGGCCATTTTTTAGCCATTTC
ATTTGTATCATCTCTTGACAGATTAACAGTTGTAGACCGGCATGGAATGGGTAGATGAATAGGTGAAAGGCATATTGGTA
GATTCCTCTGCATCTGC----------------------------------------------------TGCCTTCTCGT
TAGCAACTGCTCATTCT---TTAATCTGCTGCTCCTGCTGCCGCTTAGAATTTGTTTATGTTTATTCGCACAGTTGTGCA
CGCCGTGACACAAGCCTAGTCGGTGCAGTCGTCATCATCACAGTTATTAAACCTATCAAGCACTAAAGAAATGTATAAAG
AAGAAGTGTGT-------------------------------AAAGATTTGAAATTTGTAC---CGCGACCGGCAGGCCA
GGAAGGCTCTCCGCGCCCTCAAGTCGCTGGTGAAGCTGCAGGCCCTGGTGCGCGGCTACCTGGTGCGGAAGCAGGCGGCC
ACGACGCTGCACCGGCTGCAGGCGCTCATGAGGCTGCAGGCCTCCTCGCAGGCCCTCAAGAACCTC---TCCTCCCGGAG
GTCCATCCAGCAGGTCCAGTCCGCCAGAATTCCTTCTCGCCGTGCATCG------------------TGAACCGCATTTC
GTCTG-----TGAAAATGAAGCTGAAAATTTGACGCTTGGTTGTG------TGTTGTTGCGTAGGAGCGGAAGACGTCGG
TGCCGGTGGCGCACCGCCGGAGGCTGTCGGAGGGCGGCGCCGGGGACGACCGCAGCCCCCGGATCGTGGAGATGGACACG
TGCCAGCTGCGGTGCCGGTCGTCGCGGATCGCGGGCCGGTACGCGGCCGCCGACCCG------CAGGCGCCGCCGATCTC
CTCGCCGCTCGCCTACTTCTGCAAGCCGCCGTCGCGGCTGCAGGTGCGGGAGCTGGAGCCGCGGCAGCCCAAGACGACGC
AGAACACGCCCCGCCTCCCGGCCATCGTGCCCGGCGGATCGCCGGCGAAAGCCCGGCCCTCGTGCGGCGGCGGGGGCGGG
CGGGAGTCGAGCAGCCCGCGGTACATGGCGGACACGGCCTCGTCCGTGGCGAGGGGCCGGTGCCAGAGCGCGCCGAGGCA
GCGGCACGGCAGCAACAACCCCGCCT------------------TGGCGCGCGGCGGGTCGAGGAAGGCGGCGCCGCAGC
CGCAGTCGCAGGACAGCTTGAGCTTCAAGAGCTCGGAGGCGTGCAGCCGCGTGGAGGACTACTCCGAGATGAGCGACGAG
GTGACCAGGGACTACTACCTCGACCAGCTCTGGTGATGATCGTCCGGCGCCATTGTAGTCG-------------------
--------CTCGGTATATAGTTAGTAGGAGTAGTATCATTTAGAATTAACAAAATGCTTACTAGTAGTAGTTCTAGTTCA
TGGCACAAGATATCATCACCATCGATGTGCT---------------------------------GCCGTTGTAGTCGCTC
GG-------------------ATGCCAGAGGGAACGGGAATAAAATCCGTTGTGCTTCCGGGAAACCATTTGGGGGAAAA
CGAGGCCGC--CAAAGCCCATGAATCCCACGCGCCT----CT--GCTCTCTTCTGTCCTCCTGCCAGGATTCAATGGTGA
TTACTGAAACCATTTGGGAAAAAGAGGCCGTGACGCCGACGTCCCGCCCTCT----------------------------
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------------------------------------AAAAAACAC--------------AA---------GGCATGGAAG
CTGGGACGAGGGAAGTTAAAGAATACTGGAGTACGTACTAGGGAGTACTGGCAGTGGCGGATCCTTGGCAGTGAAGCCAA
AGGT---TTGTGGTTGTTTGGAGTACG---CACTACTGCACTGCACTACAGAACTGCAGCGCCACTGAAGCGCACCGCTT
TGGCTTAAATGC-----TGCCGTGCCGTGCTTCTGTTGGAAATGGCAG---TACCAGATGGCCTGGCTGT--CCC-----
-----------TTGATGTTGAGGTGGTGGGGTGGTAGAGA----------------------------------------
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-----------------------AGAGGAAGCTTGGCGAGG----TGCATCAATGCCGGCGCAATTCCGGACGATCGAGC
ACGTCCTTTTCGTCCTCAGAATCTCTCTCTGCGTGAGTTAATGTGACACAT---------ACATACGGTGCAGGGCAGCA
GTTGCACAGCATCGTAGCTTGCCCAAGACGGGGAATACGTGCGTACAAGAGCATT-GTTTGGTGTGGATTGGAGGCAGTA
ATATA---------------------------------------------------------------------------
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--------TGGTCACGTCGCTGCAGATCTGTTGGTCCGTTGCGTTGCGTGAAGAGTCTA---------GAGGTTCAGATT
ACGGCGCCGGATTACGCGCGAGGTAAACCGGGGCCGAGGCCCCGGGAACCCGCATTCCCAGCACT----------TGCGC
GCCAGCTTTACCTGCTGCGAAATTTTACCTGTCGTG------TCACCGGATGCGGATCTCCTGCCTC
>chr1B_1
TCCACGATCTCGTCCCGTGTACCCACC---------CTATCCCATCTA---------CAAGCCCCGCCGGAAATATAATC
ATTCGCAGGATCGGGATCTTGGCGTGAGCTGAGCTGCTGGCCGCACCCGCCCGCTCCAAAAGCCGCGCCAG----CCC--
--------CGGGAGCGGGACGACGACGACGACCGC------------------AGCGGCGACGAGAGTTTTGAGGCGGGC
GAGGTGAGATGGAAATCGTGATGATTGCCTTGCGAGCTCTAGTGGTT------TTTCTTCTGCCCCGCCTCCGTTGGTTT
C----TTCTCGCGTCTCGTTTTGCTCGTGCCCGTGCGACGCTGGCTTCCTTTGTTGCGTTGCGCCCGGCCTCGTCGTAGA
CAAGCCGGGGGAATCTTTTTCACCTCCCTGTTGCTGCGTGGCCACAAGGTTACAGGCCACAGGCGAGG----TGAGACCA
CGCGTCCGTTTTCTTCTCCCACCTTCCC-----------CGCCGCTGCTCTTCTCTTCTTCGCTCCTTCTCTGCCGCTGT
--TTTTTTACTGTAGGTTGGTTCGTTGGGGCTGGGGCTGGGGTGGGTGGGCTTTGCTTGCCTGAAAAGCTCGTCCGGGGA
AAA-GGTTTCCTCTTCCGGGCTTCACGTAGGTGGCCATAGGCGACACTGCCTCTCGCTTCCTTTCACTGATCCAACTGCC
ATCGCCCACCACCCACCGACTCCC-CCGCCGCTGCCGCTGC----------------CTTGGCGCTACGCCGCTGGCTCT
TTTCTGCCTGCGCGCAGTCCGGCATCCTCCTCTGCTCGGCCCTCCTCCCATGCTTCCTCGCCTCGCGCCTCTCTAAAAGC
TTTCTCCTCTTTTACCTCCCGACGAGAAAGCCAAAGACAAATATATTTTCTGGGGTTGCCAAGTCAAATCTTTTGCTTTC
TTCTTCAACCTTCCAAGAACTCGCTCGTCCT-------------------------------------------------
-------CCCAGCAGGTCGACGCCGTGGCTGACATTTGCTCTGTTCTTGCAGTTCGTCCTACCTTTTT-TGTGTTCTTCT
TGCCGAA------TCTTGACGCGTCGTTCTTCGCGCAGGTAGGAATAGGATCGGTCGTCGCGCCATGGGGCGGGCCATGA
GGTGGCTCAGGAAGTTGCTCAACGGGGGCGGCGGCAAGAAGGAAGGGGCCAAGGAGCAGAGCGCCGCCGCGCCGCCGATC
GAGAGGAGGAGATGGAGTTTCGCCAAGGCCAGGAGCAGCGTCGCCGACGCCAGCCGCAGGCCTTCCGTCACCGCCGTGGT
CGCCGGCGAGCTCTCCCAGTCTCAGGCGAGGCCGTGCGGCTGCGGCCAGGCGCGCGAGACCGAG------GCCGCCGTCT
TGATCCAGAAGGCCTTCAGGGGCTACCTGGTACGACCCTGTCCATGCTTCTCTCTCGCAGTTC-TTTTTTCCTTT-TCTC
TCCTAGACAAACATCAAACCGAGGTAGAA-----------GTACGTTTGAAGATTTACCAGGACAATTTTTAGGCATTTC
ATTTGTATCATCTCTTGACAGATTAACAGTTCTAAATCGA-ATGGAATGGATAGATGAATAGGTGAAAGGGATATTGGTA
GATTCCTCTGCATCTGCATTGGGCTGCAGATTTGACTTCACTGTGCGTCCCGTTG----CGATGGTTGCTGTCTTCTCGT
TAGCAACTGCTCATTGTTTATTAATCTGCTGCTGCTGCTGCCACTTAGAATTTGTTTATGTTTATTCGCACAGTTCTGCA
CGTCGTGACACTAGCCTAGTCGGTGCCGTCGTCATCATCGCAGTTATTAAACCTATCAAACACTAAAGAAATGTGTAAAG
AAAAAGCGTGT-------------------------------AAAGATTTGAAATTTGTAC---CGCGACCGGCAGGCCA
GGAAGGCTCTCCGCGCTCTCAAGTCGCTGGTGAAGCTGCAAGCCCTGGTGCGCGGCTACCTGGTGAGGAAGCAGGCGGCC
ACGACGCTGCACCGGCTGCAGGCGCTCATGAGGTTGCAGGCCTCCTCGCAGGCCCTCAAGAACCTC---TCCTCCCGGAG
GTCCATCGAGCAGGTCCGT-----CAGAATTCCTTCTCGCCGTGCATCGCGATCCTTCTTCTTCTGATGACCCGCATTTC
GT------------------------------------------------TTGTTGTTGCGTAGGAGCGGAAGACGTCGG
CGCCGGTGGCGCACCGCCGGAGGCTGTCGGAGGGCGGCGCCGGGGACGACCGCAGCCCCCGGATCGTGGAGATGGACACA
TGCCAGCTGCGGAGCCGGTCGTCGCGGATCGCGGGCCGGTACGCGGCCGCCGACCCACAGCCACAGCCGCCGCCGCTGTC
CTCGCCGCTCGCCTACTTCTGCAAGCCGCCGTCGCGGCTGCAGCTGCGGGAGCTGGAGCCGCGGCAGCCCAAGACGACCC
AGAACACGCCCCGCCTCCCGGCCATCGTGCCCGGCGGCTCGCCGGCGAAAGGGCGCCCCTCGTGCG------GGGGCGGG
CGGGAGTCGAGCAGCCCGCGGTACATGGCGGAGACGGCCTCGTCCGTGGCGAGGGGCCGGTGCCAGAGCGCGCCGAGGCA
GCGGCACGGCAACAACGCCGC---------------------------------CGGGTCGAGGAAGGCGGCGCCGCAGT
CGCA------GGACAGCTTCAGCTTCAAGAGCTCCGACGCGACGAGCCGCGTGGAGGACTACTCCGAGATGAGTGACGAG
GTGACCAGGGACTACTACCTCGACCAGCTCTGGTGATGATCGTCCGGCGCGCTGCTAATCCGGGCGGGAAATAAGCCCTT
AACATCATCTCGGTATATAGTTAGTAGTAGTA---TCATTCAGGATTAACAAAATGTT---TAGTAGTAGTTCTAGTTGA
TGGCACGACACATCATCATCGTCCTGCGATCCGAGGGGTTAACAAAATGTTTAGTAACGTAACCGCCATTGTTGTAGCTC
GGTGGAGCGTGCGAGGTTGCCATGCCAAAGAGAATGGGAATAAAATCCGTTCTGCCTCCGGGAAACCATTT-GGGGAAAA
CGAGGCCGCGCCAAAGCTCATGAACCACACACTCGT----CTTTGCTCTGCTCTGTCCTGCCACGAGATATCAATGCTGA
TTACTGAAACCATTTGGGAAAAAGAGGCCGTGACGCCGGCGTTTGGTTGCAAGGGCGGTCATGAATGGGTTGGGATCGTT
CAGAAAATAGACATGTTTGGTTATAAAGCACATGAATGGTTCGAACCAAAAAAAAGAATATGCCTTGAAGATGCTGAACC
GTTCCACCCAACCAAATTGGTCGAATCAAATGACCACCTTTTGCATGCATGACTATGTGAGTATGACTGATGGTCCCGTC
CTAAATAATTAGCTCACTACTTATATTCAGCCAAACACATGAATTGAATGGTTCAATCCCAAAAAAATTGAACGGTCCCA
ATCCATTCATACGATACCTTCAACCAAACGCATCCAAAAACACAGAGGGGGTAGCAGTGGGACTGCAAAGGGCATGGAAG
CTGGGACGAAGGGAGTTAATGGATACCATACGGACGG-------GTACTGGCAGTGGCGGATCCTTGGCAGTGAAGAAGA
CAAAGG-TTGTGGTTGTTTGGAGTGCGTTGCACTACAGCACTGCAGT-------TGCAGCGCCACTGAACCGCACCGCTT
TGGCTTAAATGTTGCCGTGCCGTGCCGTGCTTCTGTTGGAAATGGCAGCAGTACCAGATGGCTTCATCGCGCAGTATGTA
GCTGTCCGTTGTTGATGTTGAGGCCAACTCCATCGCGTTATTGGACGTTCGTTTTGTTCGGATTTTATCCGTTTGTGCAG
GGGATGAGGTCGTGTCCGGGTCTGTCCGGAAATGCGGTGGCCGTGCGCCCAGCGCGTGGCCGCATCCTTTACCCCATCCT
GTCCGCGTCTCTTTAAAAAAAAAGAAACATGTCAAATGCCAAGCCCTACGGCCGCGGTTCATCACGCACGCCGGCAACAA
AGTCAGCGGCCTACACGTCCATTGCCGGCATTAGCCAGCGGCCGGCAACACAGCCCGGCCTCCAAAATGAATGGTTGTCC
TTGCCGGGAACACAGCCAGCGGCAGGCAACACAGCCGGCCTTCAAAATGAATGTTTTTCTCGCCGGCACGCGGCCAGCGG
CCCAGTGGGCGGACGGCAACCATGCCAGCCTCCAAAAAAGAACGGCCACGACCGATCGGACGACCTAGTTCAGGCCGTCG
GCGTCGAGCATCTCCTTCTGCCTGGCCTCGAACCAGGCGCTCGTCTTCTCGCTCATCTTCGACAAGTCCACGCTCATGAT
CGCCCAGGGCCACCTCTTTTCGCTTTGGTGGCGGCATTGGTGGCCTCGATGTCGAGCTGTCTTTGCCTGGCCTTGACGTT
GTCGGCCTCGATGTCGAGCTGCCTTTGCCTGGCCGCCTCCTCGATGTCGAGTTGCCTCTGCCGGGCCGCCTCCTCCATGT
CGACCTTCCTTCTCTTGGCCGCCTTCTCCATCTCAAGCTTCTTCGTTTGGAGCTCTAGATATTGTTTCATTTGCTCGTCC
TTGCTTTGCCGCTTCTTCTCGTCCCTCATATCCTTTTGCGACATCATTGCCATGCAAAGTGTCATGCAATGCCATGGATG
AGGCATCATGAATGTCGTCAACCTTGGAGTTGGTCTTGCCCCTCGGCCTCTTCAATGCCTCGCCATCTCCATCTCCGGCG
AACTTGGCCGTCTTCAGGCCTCTCTTCCTTTGGAGCTCACGGTATTGGTCCTTAAACTTAGAACAATTGTTGATCATAGT
CCAACAATGCGTAAGAGTGAATGGCTTGTCATTGTGCCGGGCCTTGAATGCCTCCAAAGATTGAAATGCCTACACCATAT
GATCAACAACAAAGTGAACATGCAACCATATACAATGCCGAAGTCTCATGGCCGTAGCAAGGAAAGGGCAAAGAAGAAGA
GCATACCATCTCCCCAACGCCGGTACCACTCATGGGCCGTGCTTGAACGCTCTCAAATGCGGCTTGATACTTGTTGCATT
CTTGTTGTATGAACAACCATCTCTTTTGAATCGAGTCGACGCCACGTTTGCTTTCAAATTGGTAGGGCTCAAACAACTTC
CTTTCATGGAATGTTTTGTGGACTCTCGTCCAAAAAACAATACCCTTTTGTTGCGCGTCGGTCCTTGGATTTTGGCTAAT
CTCCAGAGAAACCGGCCGGGCGACAAATGCCATGCATGAGAAGGGCGTGCGCTTTGGTGACGATGGCCTCCTTCTCCTCG
ACCTCGGCCTTGTGCCGCGCGGCCTCAATCGCAGCGCGTTCGGCCGCTCTCTTGGCCGCCGTGATGTTGTTCTTGGCGAC
CACCCTCCGGTCCCTCCTCTTCGTCGATTCCGCGTTCAACTTGGCGATCTCCTTCGGCGTGCACTCCGACCGTGGCTTCC
TTGGCGCCTTGCCCTTCTTCTTCTTGGCCATTCCGGCCGGGTCGACGGTCGGGCCGCCGGAGTTCGGCTGGGCGTCGGCC
ATGGACGGAGGAGGGAGTGGGACGGGCAGGACGTGGGAGGGTTTGGGGTGGAATGCCGTCAAAGTGGCCGCGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCGGACAAGCGCACGGGTCCCGCCCGTCCGCGCGCTGTCTT
TTTCGCCCCAAAAGCGGCGCAAACTTGAACTGAGGATGGGTCGAAAGCGGACACAAAACGGACAAATATCCGTTTGCTCC
CGCGCGCTGGGCCGTCCAGCTTGTCCGTTTTATTCTAAACGGACGGAGCCGGACAGGATAGGGTCGCGCGTTGGAGTTGG
CCTGAGGTGGTGGTGGTGGTGGTAGAGGAAACTTGGCGAGATGCATGCATCAATGCCGGTGCAATTCTGGACGATCCAGC
GCGTCCTTTTCGTCCTCAGAATCTCTCTCTGCGTGAGTTAATGTGACACAT---------ACATACGCTGCAGGGCGCCA
GTTGCCCAGCATCGTAGCTTGCCAAACACAGTGACTACGTGCATATAATAGCACT-GTTTGGTGGACATTGCTGGCAGAA
AAAAGAGCGATTTGTAGTAGGAAGCGAATTTGTAGCACCTGGGTGCTCCACACTTCTATACGAACATTAAATTCAGAAAA
AAAATTATCGAGAAATTTGAAAAAAACTGAGATTTTAGTATATCAAACCTGAGGTCCCGATCTACTTCCGTGCGGAATTC
CGTGAAAAAATATTAGGAAACATATTCATGGTAAAAATGACAAAAAAATTCTATGTATACAGAAAAACGGTTTGAATGGA
TTTTTGTTCAGCCTTCGCCACGGATACGTTTTCTGATATTTTTTCACGAAATTTCACACAGGAGTAGATTGAGAACCCAC
GTTTCATACCCCCAAATTTCAGATTTTTTTTGGTTATATTTTACGATTAATATTCGTGTAGGGGTGTGGAGTACCCAGGA
GCTCCTGGGTATTTTCCCTTTGTAGTACTCCTACTATGTTAATTGTCTTCTATTTTAGAATGTACGTACTATGTTCATCG
CTGATCAGTGATCACGTCGCTGCAGATCTGTTGGTCCGTTGCGCTGCGTGCATC-TCTA---------GAGGTTCAGATT
ACAGCGCCGGATTACGCGCGAGGTAAACCAGGGCCGGGGCCCCGGGAACGCGCATTCCCAACGCTTGTTCGCAGCTGCGC
GCCAGCTTTACCTGCTGCGAAATTTT----TACCTGTCGTCCTCACCGGATTCGGATCTCC------
>chr1A_1
TCCACGATCTCGTCCCGTGTACCCACC---------CTATCCCATCCACTCTAGCGGCAAGCCCCGCCGGAAATATAATC
ATTCGCAGGATCGGGATCTTGGCGTGAG-----CTGCTGGCCGCACCCGCCCGCCCCAAAAGCCGCGCCAG----CCAGC
CCCGCGAGCGGGAGCGGGACGACGACGACGACCGCTGCCACCCCCACCGCCGCAGCGGCGACGAGAGTTTTGAGGCAGGC
GAGGTGAGATACAAGTGATGAT--------------------------------------TTCCCCACCGCCGTTGGTTT
C----TTCTCGCGTCTCGTTTTGCTCGTGCCCGTGGGACGCTGGCCTAGCTTGTTGCCTTGCGCCCGGCCTCGTCGTAGA
CAAGCCTTGTTCATCACATGCC-----------------------------ACAGCCCACAGGCGAGGCGAGCGAGAACA
CGCGTGCGTTCCCTTCTCCTACCCACCTTCCCCGCCGCACGCCGCTGCGCTTCTCTTCTTCGCTCCTTCTCTGCTTCCTG
TTTTTTCAC-----TGTTCGTTCGTTGGGGCTGCGGGTGGGTGGGT--GGCATTGCTTGCCTGAAAAGCTCGTCCGGGGG
AAAAGGTTTCCTCTTCCGGGCTTCACGTAGGTGGCCACAGGCGACGCTGCCCCTCGCTTCCTTTCACTGATCCGACTGCC
ATCTCCCACC---CACCCACAAACTCCGCCGCTGCCGCTGC----------------CTTGGCGCTACGCCGCTGGCTCT
TTTCTGTTCGGCCTCCT-----------------------------------CTTCCTCGCCGCGCGCCTCTCTAAAAGG
TTTCGCCTCTTTTACCTTCCGACGAGAAAGAGACAGAAACTTATCTTTTGGGGCGGTTC--GGTGAATGCTTTTGCTTTC
TTCCTCAACCTTCTCCCCGTTTCAGTTTCAACTTGCTCCCGTAGCTTCCGGCTTCTTGTTTACGCACGCTGTCTCAA---
----CTCACCCGCAGGTCGACGCCATGGCTGTCGTCTCCTATGTTCTTGCAGTTCGTCGTACGATTTTGTGTTTTATTTG
CCGAATCTTGAGTTCTTGACGCGTCGTTCTTCGCGCAGGTAGTAATAGGATCGGTCGTCGCGCCATGGGGCGGGCCATGC
GGTGGCTCAAGAAGGTGCTCACCGGCGGCGGCGGCAAGAAGGAAGGGGCCAAGGAGCCGAGCGCCGCCGTGCCGCCGATC
GAGAGGAGGAGGTGGAGCTTCGCCAAGGCCAGGAGCAGCGTCGCCGACGCCAGCCGCAGGCCTTCCGTCACCGCCGTCGT
CGCCGGCGAGCTCTCCCA------GGCCAGGCCGTGCGGCTGCGGCCAGGCGCGCGAGACGGAGACGGAAGCCGCCGTCT
TGATCCAGAAGGCCTTCAGGGGCTACCTGGTACGACCCTGTCCATGCTTCTCTC--GCATTTC-TCTTTTCCTTT-TCTC
TCAC--ACAAACATCAAGCTGAATTTTGTGATGAACAC----ACGTTTGAAGCT-----AGGCCAATTTTCAGGCATTTC
ATCTGCATCATCTCTTGAAAGATTAACAGTTGTAAACGGCGATGGAATGCATAGATGAATAGGTGAAAGGGATATTGGTA
GATTCCTCTGCATCTGCATTGGGCAGCAGATTTGACTTCACTGTGCGTCCTGTTGCATCCGATGGTTGCTGCCTTCTCGT
TAGCAACTGCTCATTGTTTATTAATCTGCTGCTCCTGCTGCCGCTTCGAATTTATTTATGTTTATTCCCACAGTTCTGCA
CGTCGTGACACAAGCCTAGTCGGTGCACTCGTCATCATCGCACTTATTAAACCTATCAAACACTAAAGAAATGTGTCAAA
GATTTGAAATTTGTACTACCGCGACCACTAAAGAAATGTGTCAAAGATTTGAAATTTGTACTACCGCGACCGGCAGGCCA
GGAAGGCTCTCCGCGCCCTCAAGTCGCTGGTGAAGCTGCAAGCGCTGGTGCGCGGCTACCTGGTGCGGAAGCAGGCGGCC
ACGACGCTGCACCGGCTGCAGGCGCTCATGAGGCTGCAGGCCTCCTCGCAGGCCCTCAAGAACCTCTCCTCCTCCCGGAG
GTCCATCGAGCAGGTCCGT-----CAGAATCCCTTCCCGCCGCGCATCGTGATTCTTCTTCTGGTGATGAACCGCATTTC
GTCTGGTGAATGAAAATGAAGCTGAAAATTTGACGCTTGATGATTGTTTGTTGTTGTTGCGTAGGAGCGGAAAACGTCGG
TGCCTGTGGTGCACCGCCGGAGGCTGTCGGAGGGCGGCGCCGGGGACGACCGCAGCCCCCGGATCGTGGAGATGGACACG
TGCCAGCTGCGGTGCCGGTCGTCCCGGATCGCGGGCCGGTACGCGGCCGCCGACCCG------CAGGCGCCGCCGCCGTC
CTCGCCGCTCGCCTACTTCTGCAAGCCGCCGTCGCGGCTGCAGCTGCGGGAGCTGGAGCCGCAGCAGCCCAAGACGACGC
AGAACACGCCCCGCCTCCCGGCCATCGTGCCCGGCGGCTCGCCGGCGAAAGGCCGGCCCTCGTGCG------GGGGCGGG
CGGGAGTCGAGCAGCCCGCGGTACATGGCGGAGACGGCGTCGTCCGTGGCGAGGGGCCGGTGCCAGAGCGCGCCGAGGCA
GCGGCACGGCAACAACAACCCCGCCGCCGGCTTGGCCCCGGGCCTGGCGCGCGGCGGGTCGAGGAAGGCGGCGCCGCAGT
CGCA------GGACAGCTTCAGCTTCAAGAGCTCGGAGGCGTGCAGCCGCGTGGAGGACTACTCCGAGATGAGCGACGAG
GTGACCAGGGACTACTACCTCGACCAGCTCTGGTGATGATCGCCCGGCGCGCTACTAATCAGGGCGTGAAAGCCATTAAC
ATCGTCGTCTCGGTATATAGTTAGTAGGAGTA---TCATTCAGGATTAACAAAATGCTTAGC---AGTAGTTGTAGTTGA
TGGCACGGCACATCATCATCGTCATGGTCATCCGATGT---------------------TAACCGCCATTGTAGCAGCTC
GGTGGAGCGAGCATGG----CATGCCAGAGAGAATGGGAATAAAATCCGTTCTGCTTCCGCGAGACCATCTGGGGGAAAA
CGAGGCCGCGCCAAAGCTCATGAACCCCACCACCCTCGTGCTCTGCTCTGCTCTGTCCCGCCGCTGCCAGCCTCGATGTA
TCAATG-----------------------GTGACACCGACGTCCCCCCCTCT----------------------------
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------------------------------------AGAAAACAGAGGGGGTAGTGCAGAA---------GACATGGAAG
CTGGGACGAAGGGAGTTAATGGATACTG---------------------------------------GCAGTGAAGCCAG
AGGTTTCTTGTGGTTGTTTGGAGTACG---CACT---GCACTGCACTAGAGA-----------ACTGAAGCGCACCGCTT
TGGCTTAAATGTTGCCGTGCCGT-----GCCTCTGCTGGAAATGGCAGTAGTACCAGATGGCCTGGCTGTGTCCC-----
-----------TTGATGTTGAGGTGGTGGGGTGGTAGAGA----------------------------------------
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-----------------------AGAGGAAGCTTGGCGAGG----TGCATCAATGCCGGCGCAATTCCGGACGATCCAGC
GCCTCCCTTTCGTCCCCAGAATCTCTCTCCGCGGGCGTCAATGTGACCGACGGGAAGGACACATACGGTGCAGGGCGCCA
GTTTCCCAGCATCGTAGCTTGCCCAAGACGGGGAGTACGTGCGTACAATGGCGCGCGTTCGGTGGCCATCGCAGGCAGAA
AAAATAGCAATCTGTA----------------------------------------------------------------
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--GATCACTGATCACGTCGCTGCAGATCGGTTG--------CGCTGCGTGCATC-TCGGCAGAGTGTGGAGGTTCAGATT
ACAGCGCCGGATTACGCGCGAGGTAAAGCAGGGCCGAGGCCCCGGGAACCCGCATTCCCAACGCTTGTTCG---------
--CAGCTTTACCTGCTGCCAATTTTTTTACTACCTGTCGTCCTCGCCGGATTCGGATCTCC------
>SNPs
-------------------------S-SSSSSSSSS--------------------------------------------
-------------------------------SSSSS-SSS-------------------------------SSSS-----
--------------------------------------------------------------------------------
-------------------S--------S----S-----SSSSSSSSSSSSSS---------------------------
-SSSS---------------------------------------------------------------------------
-----------------------S-------------S--SS-SS-----S-----S-----------------------
--------S----S-----------------------------------------------------------------S
--------------------------S-----------------------------------------------------
--------------------------S-----S------------------------------S----------------
---S-----SS---------S--------S---SS-S-SS-SSSSSSSSSSSSSSSS-----------------------
--------------SS---S-SSSS-SSSS--------------------------------------------------
---------S-------------------------S-----------------S--------------------------
--------------------------------S-------------------S-------------------S----SSS
SSSS----------------------------------------------S---S-------------------------
-------------------------S-------------------S--------------------------S-------
--------------S----------------------------------------S---------------------S--
--------------------------------------------------------------------------------
---------------S-----------------------S----------------------------------------
----S--------S-----S--S-----------------------------------S----S----------SS----
----------------S-----------S---------SS-------------------------S-------S------
----------------------------------S----SS---------S-------------------S---------
--------------------------------------------------------------------------------
---------------S-----------------------------------------------------------S----
--S------------------------------------S-------------------S--------------S-----
--S---S-------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
-------S---------SSSSSSS--------------------------------------------------------
---------------------------------------S-SS-S-----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S-S--
-------------------------------------------S------------------------------------
-------------------------------------S-------------S--------------SSSSSS--------
--------------------------------S-----------------------------------------------
-----------S-------------S-----------------------------------------------------S
----SSSSSS---------S------------------------------------------------------------
--------------------------------------------------SS-SS--S--S-------------------
--------------------------------SSS-----S--S----------------S-----------------S-
------S-S-S-------S-S--SSS--SS-------------------------------------S-------S----
------------------------------S---S----------------S----------------------------
-----------------S------S-----S-S----------------SS--------S-S--S--S-S------S---
--------------------------------------------------------------------------------
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--------------------------------------------S-----------------------------------
---------S--S------S-S------S-SSSSSSSSSSSSSS------------------------------------
------------------------------------S-----------S---SS--------------------------
-----------S--------------------------------------------------------------------
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----------------------------------------------------------------------------S---
S---------------------------------------------------------------------------SS--
-----S----------------------------S-------------S----S----------SSS----S------S-
-S-SS---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S--------------------------------S------S-SSS-------------------------
--S--------------------------S------------------------------S-S-----------------
--------------------------SSSSSS-S-----------------S---------SSSSSS
>forward_438
--------------------------------------------------------------------------------
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------------------TTCACATCCCTGTTGCTGCT------------------------------------------
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>reverse_2184
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-----------------------CCAGAATTCCTTCTCGCCGT-------------------------------------
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>forward_441
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---------------------ACATCCCTGTTGCTGCTTGT---------------------------------------
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>reverse_2283
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------------------------------------------GTGTGTTGTTGCGTAGGAGC------------------
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>forward_442
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----------------------CATCCCTGTTGCTGCTTGTG--------------------------------------
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>reverse_2285
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--------------------------------------------GTGTTGTTGCGTAGGAGCG-----------------
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>forward_1166
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--------------------------TTCTTCGCGCAGGTAGGAAC----------------------------------
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>reverse_3061
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--------------------ATCGATGTGCTGCCGTTGTA----------------------------------------
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-------------------------------------------------------------------
