>input_sequence_47834
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-----------------ATGAGCTCGGGCGGCGGCAGCAGCACGCTTGGCGGCTGCGGCGGGCCGAGCGGGAGCGGCAGC
GGCAGCGGAGGGGTAGG---AGGAGGGGGCCTTGGTGGCGGCGGCGGCGGGCCGTGCGGCGCGTGCAAGTTCCTCCGGCG
CAAGTGCGTGAGCGAGTGCATCTTCGCGCCCTACTTCGACTCGGAGCAAGGCGCGGCGCACTTCGCGGCGGTGCACAAGG
TGTTCGGCGCCAGCAACGTGTCCAAGCTGCTCCTCCAGATCCCCGCGCACAAGCGCCTCGACGCCGTCGTCACCATCTGC
TACGAGGCCCAGGCCCGCCTCCGCGACCCCGTTTACGGCTGCGTCGCCCACATCTTCGTGCTCCAGCAGCAGGTATACAT
GCATCCATCCATCCATCATAT----ACCCATGGATCGAGTTAAATCTCCATGTTGATCGATCATC----CTGCATGCCTC
TTTGGATTATGGGAGGGGAAAACCCAGTAG------GCGCCATGCACAGCACAGCACAGCACAGCTAGCGCCGCCTCGAA
TCGCCAGCTTGCTGGCTGCATGCCATGCGTATGGATCTGGATCTTTTCCGGGGAGGGTAGTATTCCGGCGGCGCGAGTAG
GCCGCGTTTCTTCTTTCTGGAGAAGAAAGGTAAGTCTACTTTGGGAGGAAATTAACACGGCGAAGCCAAGCAACGGCAGT
GCGAAAAGGGGCACGCCAAGCGCTAAACCGGGAGACTGCTTCCCCAGCTGGACTCTGCGATGAATGATATGCGCGCGCGC
ACGACGTCTCATCCGTCGCGTCCGCGGGGCCGTCCGATCCTGCCCACCCGCAGATCGTACACACGCCCGTCACGCCACGT
CCATGCCCACGCGCGCATATATGTTAGTACC----CCGTCTCGGTCTCTGGGGTTTGAACAGGCCAAGGAG---------
-TCCTTGGTTCTCGATCTGAACCCCATGAAAAGAAAGCCCTAGCACCGATCTCTAGTTCTGGAAGTTCTAACCGC-----
CCCTTCTCTTTTGTTTCTAGTGCAAATCTTTTGATCTTCGTTGCAAATCATGTCGTTGCATGCATGCATGTGGTTCTATC
TGT--------------TCATGTGTAGGAGCATAATGGTGTGACTGGTTTGAAGCTTGTACTAATGCATGAATGTATGTA
TGTGTCATGTCGTGCTACCATTCTCCAGGTGGTGAATCTCCAGGCCGAGCTGACCTACCTGCAGACCCACCTGGCCACCC
TGGAGCTGCCGTCGCCGCCGCTGCCGGCCGCGCCGCAAATGCCGATGGCGATGCCGGCCCAGTTCTCCATCTCGGACCTG
CCGTCCACGACCAACATTCCGACCACCATCGACCTGTCCGCGCTCTTCGAACCGCCGGCGCAACCGCAGTGGGCGGTCCA
GCAGCATCACCAGCACCAGCTCCGCCAGCATCCGTCATACGGCGCCATGGCGCACAGGGGCGGCTCCAGCA---TGGCGG
AGGGATCAGCGGCCAGCGGCAGCGGCAGCGGT------GAGCTGCAGACGCTGGCACGGGAGCTCCTGGACCGCCACGGC
CGGTCCGGCGTGAAGCCCGAGCTGCAGCCACCACCGCCGCCGCATCCAAGATGA--------------------------
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>chr4B_1_TraesCS4B01G224600
AGTGCAGTCAGTAGCCATAGCTAAGTAGCCCGATCGATCACCTACCCATAAACAAAAGGGGCAGCGCGCAATACGTAGCG
TATGGAGGGGAAGAATGTCATGTTAGGCTCACGTGGGGAGACTATGCACTGATGCATCCATCTCGAACTAGCGTCCACTG
TAGCGGTGGTGGAATGTGCTTGAGAGAGACCCCTCAGGAGAGGAGCCAGCCGGGCGATCGATCGTGCAGTGGATGTTTGA
GACAATTAATTCGGGAGAGACTTTTTTTCCATCTGTACGAACCAACATAGGAGTGTATGTGAGTGAGTGCATGT----GT
GTTTGTGTGACGGATAGATGCACCGTTGGGTGCAAATTTGGGCGAGAGGGGGACTGTGGTGCGGTTCCCTCTTTGGCTC-
---GCCCCTCTCTCGCATACATATGCAGCATGTTTGCTTCACGCAATCTTCTAGCCCTTAAGAGAGCGAAAGAGCAGAAA
GAGAAGTGTGTAGAGAGGGAAAGAGTGGTACCAGCTGCTGCTCGATCGCTAGGCTTCCATGCCGTGGCTTTAAAGTCTCA
TCAATACCACAAAAACAAAAACTACACATACACATACACATATATGTTAGTCCAGCAGTAGGACGAGTAGGGAAAGTGTG
CGTATAT-------------GAGATATGCATGAGAGAGAAACCGAAAAAAAGA-AAATCGGGGTGGAACTGTAACCCCCC
ATGACCTTCCACCAATAGGACAAACACCAAAAGGAGGCAGGGATTTCCATATATTACGCGTTTGCCCCTCCCCCCTCCGC
GTCTACTATATTGGCAGCCTGCCTCCCTCCCCATTCGACCCTCTTCTC-------CTCTCGCCCTCTCTCTCTCTCTCTC
TCTCTCTCTCTATCTCTCTCCATACTTACCAACACCGGCG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AGCGAGGGCACTTGTTTT
ATCCTATAACTAGCAAGTGCCTAGAGG-AGCAGCAGATATAAGGGGAGAGGGCCGATTAAAAGCTCTC-----GCGACCG
ATCGATCTAGCACAGCAATGAGCTCGGGCGGCGGCAGCAGCACGCTTGGCGGCTGCGGCGGGCCGAGCGGGAGCGGCAGC
GGCAGCGGAGGGGTAGG---AGGAGGGGGCCTTGGTGGCGGCGGCGGCGGGCCGTGCGGCGCGTGCAAGTTCCTCCGGCG
CAAGTGCGTGAGCGAGTGCATCTTCGCGCCCTACTTCGACTCGGAGCAAGGCGCGGCGCACTTCGCGGCGGTGCACAAGG
TGTTCGGCGCCAGCAACGTGTCCAAGCTGCTCCTCCAGATCCCCGCGCACAAGCGCCTCGACGCCGTCGTCACCATCTGC
TACGAGGCCCAGGCCCGCCTCCGCGACCCCGTTTACGGCTGCGTCGCCCACATCTTCGTGCTCCAGCAGCAGGTATACAT
GCATCCATCCATCCATCATAT----ACCCATGGATCGAGTTAAATCTCCATGTTGATCGATCATC----CTGCATGCCTC
TTTGGATTATGGGAGGGGAAAACCCAGTAG------GCGCCATGCACAGCACAGCACAGCACAGCTAGCGCCGCCTCGAA
TCGCCAGCTTGCTGGCTGCATGCCATGCGTATGGATCTGGATCTTTTCCGGGGAGGGTAGTATTCCGGCGGCGCGAGTAG
GCCGCGTTTCTTCTTTCTGGAGAAGAAAGGTAAGTCTACTTTGGGAGGAAATTAACACGGCGAAGCCAAGCAACGGCAGT
GCGAAAAGGGGCACGCCAAGCGCTAAACCGGGAGACTGCTTCCCCAGCTGGACTCTGCGATGAATGATATGCGCGCGCGC
ACGACGTCTCATCCGTCGCGTCCGCGGGGCCGTCCGATCCTGCCCACCCGCAGATCGTACACACGCCCGTCACGCCACGT
CCATGCCCACGCGCGCATATATGTTAGTACC----CCGTCTCGGTCTCTGGGGTTTGAACAGGCCAAGGAG---------
-TCCTTGGTTCTCGATCTGAACCCCATGAAAAGAAAGCCCTAGCACCGATCTCTAGTTCTGGAAGTTCTAACCGC-----
CCCTTCTCTTTTGTTTCTAGTGCAAATCTTTTGATCTTCGTTGCAAATCATGTCGTTGCATGCATGCATGTGGTTCTATC
TGT--------------TCATGTGTAGGAGCATAATGGTGTGACTGGTTTGAAGCTTGTACTAATGCATGAATGTATGTA
TGTGTCATGTCGTGCTACCATTCTCCAGGTGGTGAATCTCCAGGCCGAGCTGACCTACCTGCAGACCCACCTGGCCACCC
TGGAGCTGCCGTCGCCGCCGCTGCCGGCCGCGCCGCAAATGCCGATGGCGATGCCGGCCCAGTTCTCCATCTCGGACCTG
CCGTCCACGACCAACATTCCGACCACCATCGACCTGTCCGCGCTCTTCGAACCGCCGGCGCAACCGCAGTGGGCGGTCCA
GCAGCATCACCAGCACCAGCTCCGCCAGCATCCGTCATACGGCGCCATGGCGCACAGGGGCGGCTCCAGCA---TGGCGG
AGGGATCAGCGGCCAGCGGCAGCGGCAGCGGT------GAGCTGCAGACGCTGGCACGGGAGCTCCTGGACCGCCACGGC
CGGTCCGGCGTGAAGCCCGAGCTGCAGCCACCACCGCCGCCGCATCCAAGATGATCTCAATCCTCCCTCCAA-----GCC
GCGCGCGTGGTCCATGGCCAGAGAGCGATCAAGGCGCAACCGTGCAAAGAGATCGAGTTCGTGATCGCAGGTGACATGGC
------AGCAGAAGAGTTGGCGCGCGGCAACAACGAGAGGGATTATTGGGATTGGTGACGGAGGGATGATGGCGAGC--A
GCGTGGT----TCGAGTAGGTAGAAGAGAAGCA----------TTGGCCGGTTTTCGCGTATCCACCTTGTTGTTAACCA
GGGGTGCAAGGACGCCCCACTTGCTCCATATTCTACATTTGATTTGGCTTTTCCTCCAACAGAGGACGATCGCTCCGTCC
ATGGATCGATCGGGTCCGTAGTCAGTAGAAGGGTAGTAGTTTGACATGGCTAGCAGTGTTACTTTGGGCCACCGGCCGGA
CGTTCCATTAATTGCAAGATTTTTAAGAAGCTTCTATTCCTGGCTACCATACACATCCCTCTCGCTGTTGATCACGCTGG
CCGGCGATGCTTAATTCT---------AGCAGCTGTTTCGACGCATTTATGGCCTTCTCTAAATTGGTTTTGCAGCTTCA
G-------------------------------------------------------------------------------
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--------------------------------------------ATCGACTCGACTGTGAG----TTCATTTTATTTTTA
TTTTCGAACGAGTGAGAGACAAGTCGGGCACTCACTATCGATCGCTCGTGTATTTGTTTATTTGTT---GTTGCGACGGC
CAGCGGCGGTGCTGTGACGCAACAGTGCTCTGAAGTCACTTCCCGCGTGGAGTTATGAACAGCTCATCAGCTCTCTGGAT
AGGGGACATGTGGCTACATGATCGGGCCCACGCTTGAGTAGATGAGAGGGAAAAGGAATATGGTTTTGGTCAGTCTGTTT
GTCAGGGATGGATCGATCCAGCCTGCTTTGACTATGACCATTG-------------------------------------
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TTATGTGTTGTCCGCCGCTGTTGCATCTAGGTATACGTATGCCATGCCCCCCGTATCGTGGTGTCGGTTGGAAAGTGAAA
TTTGAGCAAATCAATTTAAACATGGATCATGATTCTTAACTGTTGAAACGTGATATC
>chr4A_1
AGTGCAGTCAGTAGCCATAGCTGACTAGCCCGATGGATCACCTACCCATAAACAAAAGGGGCAGCGCGCAATACGTAGCG
TATGGAGGGGAAGAATGTCATGTTAGGCTCACGTGGGGAGACTATGCACTGATGCATCCATCTCGAACTAGCGCCCACTG
TAGCGGTGGTGGAATGTGCTTGAGAGAGACCCCTCAGGAGAGGAGC------------CGATCGTGCAGTGGATGTTCGA
GACAATTAATTCGGGAGAGAC--TTTTTCCATCTGTACGAACCAACATGGGAGTGTATGCGAGTGAGTGCATGTGTGTGT
GTTTGTGTGACGGATAGATGCACCGTTGGGTGCAAATT-GGGCGAGGGGGGGACTGTGGTGCGGTTCCCTCTTTGGCTCG
ATCGCCCCTCCCTCGCATACATATGCAGCATGTTTGCTTCACGCAATCCTCTAGCCCTTAAGAGAGCGAAAGAGCAGAAA
GAGAAGTGTGTAGAGAGGGAAAGAGTGGTACCAGCTGCTGCTCGATCGCTAGGCTTCCATGCCGTGGCTTTAAAGTCTCA
TCAATACCCCAAAAACAAAAACTACACATACACATACGCATATATGTTAGTCCAGCAGTGGGACGAGTAGGGAAAGTGTG
CGTATATATATATGAGATATGC---ATGCATGAGAGAGAAACCGAAAAAAAAAGAAATCGGGGTGGAACTGTAACCCCCC
ATGACCTTCCACCAATAGGACAAACACCAAAAGGAGGCAGGGATTTCCATATATTACGCGTTTGCCCCTCCCCC-TCCGC
GTCTACTATATTGGCAGCCTGCCTCCCTCCCCATTCGACCCTCCTCTCCTCTCGCCCTCCCCCC----------------
-------------CTCTCTCCAGACTTACCAACACCGGCG----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------AGCGAGGGCACTTGTTTT
ATCCTATAACTAGCAAGTGCCTAGAGGGAGCAGCAGATATAAGGGGAGAGGGCCGATTAAAAGCTCTCTTCTTGCGGCCG
ATCGATCTAGCACGGCAATGAGCTCGGGCGGCGGCAGCAGCACGCTTGGCGGCTGCGGCGGGCCGAGCGGGAGCGGCAGC
GGCAGCGGAGGGGGAGGAGGGGGAGGGGGCCTTGGCGGCGGCGGCGGCGGGCCGTGCGGCGCGTGCAAGTTCCTCCGGCG
CAAGTGCGTGAGCGAGTGCATCTTCGCGCCCTACTTCGACTCGGAGCAAGGCGCGGCGCACTTCGCGGCGGTGCACAAGG
TGTTCGGCGCCAGCAACGTCTCCAAGCTGCTCCTCCAGATCCCCGCGCACAAGCGCCTCGACGCCGTCGTCACCATCTGC
TACGAGGCGCAGGCCCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCCACATCTTCGCGCTCCAGCAGCAGGTATACAT
CCATCCATCCATCCATCATATACCCATCGATCGATCGAGTTAAATCTCCGTGTTGATCGATCATCGATCCTGCATGCCTC
TTTGGATCACGGGAGGGAAAACCCCAGTAG------GCGCCATGCACAGCACAGCACAGCACAGCTAGCGCCGCCTCGAG
TCGCCAGCTTGCTGGCTGCATGCCATGCGTATGGATCTGGGTCTTTTCCGGGGAGGGTAGTACTCCGGCGGCGCGAGCAT
GCCGCGTTTCTTCTTTCTGGAGAAGAAAGGTAAGTCTACTTTGGGAGGAAATTAACACGGCGAAGCCAAGCAACGGCAGT
GCGAAAAGGGGCACGCCAAGCGCTAAACCGGGAGACTGCTTCCCCAGCTGGACTTCGCGATGAATGATATGCGCGCGCGC
ACGACGTCTCATCCGTCGCGTCCGCGGCGCCGTCCGATCCCGCCCACCCGCAGATCGTACGCACGCCCGTCACGCCACGT
CCACGCCCACGCGCGCATATATGTTAGTACCCCGTCCGTCTCGGTCTCTGGGGTTTGAACAGGCCAAGGAGCTAGTAGTA
GTCCTTGGTTCTCGATCTGAACCCCATGAAAAGAAAGCCCTAGCACCGATCTCTAGTTCTGGAAGTTCTAACCGCGCGCC
CCCTTCTCTTTTGTTTCTAGTGCAAATCTTTTGATCTTCCTTGCAAATCATTTCGTTGCATGCATGCATGTATGCATGTG
GTTCTACTTCTATCTGTTCATGTGTATGAGTATCGTTGTGTGACTGGTTTGAAGCTTGTACTAATGCATGAATGTATGTG
TGTGTCATGT--------CATTCCCTAGGTGGTGAATCTCCAGGCCGAGCTGACCTACCTGCAGACCCACCTGGCCACCC
TGGAGCTGCCGTCACCGCCGCTGCCGGCCGCGCCGCAAATGCCGATGGCGATGCCGGCCCAGTTCTCCATCTCGGACCTG
CCGTCCACGACCAACATTCCCACCACCATCGACCTGTCCGCGCTCTTCGAACCGCCGGCGCAACCGCAGTGGGCGCTCCA
GCAGCATCACCAGCACCAGCTCCGCCAGCAGCCGTCATACGGCGCCATGGCGCACAGGGGCGGCTCCAGCAGCATGGCGG
AGGGATCGGCGGGCAGCGGCAGCGGCAGCGGCAGCGGCGACCTGCAGACGCTGGCGCGGGAGCTCCTGGACCGCCACGGC
CGGTCCGGCGTGAAGCCCGAGCTGCAGCCACCGCCGCCGCCGCATCCAAGATGATCTCAATCCTCCCTCCAATCCAAGCC
GCGCGCGTGGTCCATGGCCGGAGAGCGATCAAGGCGCAACCGTGCAAAGAGATCGAG-------------GTGACATGGC
GGCAGAAGCAGAAGAGTTGGCGCGCGGCAACAAGGAGAGGGATTATTGGGATCGGTGAGGGAGGGATGATGGAGAGC--A
GCGTGGTTCAATCGAGTAGGTAGAAGAGAAGCAGCATGCAGCATTGGCCGGTTTTCGCGTATCCACCTTGTTGTTAACCA
GGGGTGCAAGGGCGCCCCACTTGCCCCATATTCTACATTTGATTTGGCTTTTCCTCCAACAGAGGACGATCG--------
--------ATCGGGTCCGTAGTCAGTAGA-GGGTGGTAGTTTGACATGGGTAGCAGTGTTACTTTGGGCCACCGGCCGGA
CGTTCCATTAATTGCAAGATTTTTAAGAAGCTTCTATTCCTGGCTACCATACACATCCCTCTCGCTGTTGATCACGCTGG
CCGGCGATGCTTAATTCTGGCTACTCCAGCAGCTGTTTCCACGCATTTATGGCCTTCGCTAAATTGGTTTTGCAGCTTCC
G-------------------------------------------------------------------------------
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--------------------------------------------ATCGGCTCGACTGTGATGCC-TTCATTTTATTTTAT
TTTACTT------------------------------------GTTCTTGCATTTGTTTATTTGTTCTTGTTGCGGCGGC
CAGCGGCGGTGCTGTGACGCAACAGTGCTCTGAAGTCACCTCCGGCGTGGAGTTATGAACAGCTCATCAGCTCTCTGGAT
AGGGGACATGTGGCTACATGATCGGGCCCGCGCTTGAGTAGATGAGAGGGAAAAGGAATATGGTTTTGGTCAGTCTGTTT
GTCAGGGATGGATCGATCCAGCCTGCTTTGACTATGACCATTG-------------------------------------
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TTATGTGTTGTCCGCCGCTGTTGCTTCTAGGCATACGTATGCCATGCCCCCCGTATCGTGGTGTCGGTTGGGAAGTGAAA
TTTGAGCAAATCAATTTGAACATGGATCATGATTCTTAACT----------------
>chr4D_14
-------------GCCGTAGCTAACTAGCCCGATCGATCACCTACCCATAAACAAAAGGGGCAGCGCGCAATACGTAGCG
TATGGAGGGGAAGAATGTCATGTTAGGCTCACGTGGGGAGACTATGCACTGATCCATCCATCTCGAACTAGCGTCCACTG
TAGCGGTGGTGGAATGTGCTTGAGAGAGACCCCTCAGGAGAGGAGCCAGCCGGCCGATCGATCGTGCAGTGGATGTTCGA
GACAATTAATTCGGGAGAGAC--TTTTTCCATCTGTACGAACCAACATAGGAGTGTATGTGAGTGAGTGCATGT----GT
GTTTGTGTGACGGATAGATGCACCGTTGGGTGCAAATT-GGGCGAGC--GGGACTGTGGTGCGGTTCCCTCTTTGGCTCG
ATCGCCCCTCTCTCGCATACATATGCAGCATGTTTGCTTCACGCAATCTTCTAGCCCTTAAGAGAGCGAAAGAGCAGAAA
GAGAAGTGTGTAGAGAGGGAAAGAGTGGTACCAGCTGCTGCTCGATCGCTAGGCTTCCATGCCGTGGCTTTAAAGTCTCA
TCAATACCACAAAAACAAAAACTACACATACA------------TGTTAGTCCAGCAGTGGGACGAGCAGGGAAAGTGTG
CGTA------TATGAGATATGAGATATGCATGAGAGAGAAACCGAAAAAA-GA-AAATCGGGGTGGAACTGTAACCCCCC
ATGACCTTCCACCAATAGGACAAACACCAAAAGGAGGCAGGGATTTCCATATATTACGCGTTTGCCCCTCCCCC-TCCGC
GTCTACTATATTGGCAGCCTGCCTCCCTCCCCATTCGACCCTCCTCTCCTCTCGGCTCTCGCCCTCTCTCTCTCTCTCTC
TCTCTCTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGAGGGCACTTGTTTT
ATCCTATAACTAGCAAGTGCCTAGAGGGAGCAGCAGATATAAGGGGAGAGGGCCGATTAAAAGCTCTCTTCTTGCGGCCG
ATCGATCTAGCACAGCAATGAGCTCGGGCGGCGGCAGCAGCACGCTTGGCGGCTGCGGCGGGCCGAGCGGGAGCGGCAGC
GGCAGCGGAGGAGGAGGTGGAGGAGGAGGGCTTGGCGGCGGCGGCGGCGGGCCGTGCGGCGCGTGCAAGTTCCTCCGGCG
CAAGTGCGTGAGCGAGTGCATCTTCGCGCCCTACTTCGACTCGGAGCAAGGCGCGGCGCACTTCGCGGCGGTGCACAAGG
TGTTCGGCGCCAGCAACGTGTCCAAGCTGCTCCTCCAGATCCCCGCGCACAAGCGCCTCGACGCCGTCGTCACCATCTGC
TACGAGGCGCAGGCCCGCCTCCGCGACCCCGTCTACGGCTGCGTCGCCCACATCTTCGCGCTCCAGCAGCAGGTATACAT
CCATCCATCCATCCATCCATCATACACCCATCGATCGAGTTAAATCTCCGTGCTGATCGATCATCGATCCTGCATGCCTC
TTTGGATTACGGGAGGGAAAACCCCAGTAGGCGCCAGCGCCATGCACAGCACAGCACAGCACAGCTAGCGCCGCCTCGAA
CCGCCAGCTTGCTGGCTGCATGCCATGCGTATGGATCTGGATCTTTTCCGGGGAGGGTAGTATTCCGGCGGCGCGAGTAT
GCCGCGTCTCTTCTTTCTGGAGAAGAAAGGTAAGTCTACTTTGGGAGGAAATTAACACGGCGAAGCCAAGCAACGGCAGT
GCGAAAAGGGGCACGCCAAGCGCTAAACCGGGAGACTGCTTCCCCAGCTGGACTTCGCGATGAATGATATGCGCGCGCGC
ACGACGTCTCATCCGTCGCGTCCGCGGCGCCGTCCGATCTTCCCCACCCGCAGATCGTACACACGCCCGTCACGCCACGT
CCACGCCCACGCGCGCATATATGTTAGTACC----CCGTCTCGGTCTCTGGGGTTTGAACAGGCCAAGGAGCTAG---TA
GTCCTTGGTTCTCGATCTGAACCCCATGAAAAGAAAGCCCTAGCACCGATCTCTAGTTCTGGAAGTTCTAACCGC----C
CCCTTCTCTTTTGTTTCTAGTGCAAATCTTTTGATCTTCCTTGCAAATCATTTCGTTGCATGCATGCATGTGGTTCTATC
TGTTCA----------TTCATGTGTTCGAGTATCGTTGTGTGACTGGTTTGAAGCTTGTACTAATGCATGAATGTATGTA
TGTGTCATGTCGTGCCGCCATTCCCCAGGTGGTGAATCTCCAGGCCGAGCTGACCTACCTGCAGACCCACCTGGCCACAC
TGGAGCTGCCGTCGCCGCCGCTGCCGGCTGCGCCGCAAATGCCGATGGCGATGCCGGCCCAGTTTTCCATCTCGGACCTG
CCGTCCACGACCAACATTCCGACCACCATCGACCTGTCCGCGCTCTTCGAACCGCCGGCGCAACCGCAGTGGGCGCTCCA
GCAGCATCACCAGCACCAGCTCCGCCAGCAGCCGTCATACGGCGCCATGGCGCACAGGGGCGGCTCCAGCAGCATGGCGG
AGGGATCGGTG------------------GGCAGCGGCGACCTGCAGACGCTGGCGCGGGAGCTCCTGGACCGCCACGGC
CGGTCCGGCGTGAAGCCCGAGCTGCAGCCACCGCCGCCGCCGCATCCAAGATGATCTCAATCCTCCCTC-----CAAGCC
GCGCGCGTGGTCCATGGCCGGAGAGCGATCAAGGCGCAGCCGTGCAAAGAGATCGAGTTCGTGATCGCAGGTGACATGGC
GGCAGAAGCAGAAGAGTTGGCGCGCGGCAACAACGAGAGGGATTATTGGGATCGGTGAGGGAGGGATGATGGCGAGCATA
GCGTGGT----TCGAGTAGGTAGAAGAGAAGCAGCATGCAGCATTGGCCGGTTTTCGCGTATCCACCTTGTTGTTAACCA
GGGGTGCAAGGGCGCCCCACTTGCTCCATATTCTACATTTGATTTGGCTTTTCCTCCAACAGAGGACGATCGCTCCGTCC
ATGGGTCGATCGGGTCCGTAGTCAGTAGA-GGGTGGTAGTTTGACATGGGTAGCAGTGTTACTTTGGGCCACCGGCCGGA
CGTTCCATTAATTGCAAGATTTTTAAGAAGCTTCTATTCCTGGCTACCATACACATCCCTCTCGCTGTTGATCACGCTGG
CCGGCGATGCTTAATTCTGGGTACTATCGCAGCTGTTTCGACGCATTTATGGCCTTCTCTAAATTGGTTTTGCAGCTTCT
TCAGATCGACATTTTTTTTTTTTGAAAAACTTCAAATCTATTCATCTTCAATCATGATAGTACAACAAACACTAAAAATA
ATAAAAGTTACATCCAGATCCGTAGACCATCTAGCAATGCCTACAAGCACTGAAGCGAGCCGAAGGCGCGCCGCTGTCAT
CGCCCCTCCCTCGCCGGAGCCAGGCAAACCTTGTTGTAGTAGACAGTCGGGAAGTCGTTGTGATAAAGCCCCGTAGAACC
AACGCACCAGAACAGAAACCGCCGCGGATGAAGAGTGTAGATCAAAAGGATCTAACCTGAAAATACACGAACAAAGACGA
ACGACGAACAGATCCGAGCAAATCCACGAAAGGCAGATCCGCCGGCGACACAACTCCACACGCCCACCGACGATGCAAGA
CGCATCACCGAAACGGGGCTAGGCGGGGAGACCTTTATTCCATCTTCAGCGAGCCGCCACCGTCTTGCCTTCCTGAGCAG
AACACACACCTAACAAAGCTCGAAAAAAGATCTAAAAACGAAGCCCTCCCACCGGCAAGAGCCGAGATCCACTCCGCCTC
CATGGCCATAGGGCCACCGGAAACGGGATGGACCGGCGCCGGCGCCGGTGGGAGGCAGAAAGCTAGGGTTCTTGAAGGCG
GCGGCTAGGTGTGCGCCCGTGTTGTATTTGGAAGTAGTCTTCATATCGACTCGACTGTGCGTTAATTCATTTTATTTTTA
TTTCCGAACGAGGGAGAAGTCGGG--------CACTATCGATCGTTCGTGTATTTGTTTATTTGTT---GTTGCGACGGC
CAGCGGCGGTGCTGTGACGCAACAGTGCTCTGAAGTCACCTCCGGCGTGGAGTTATGAACAGCTCATCAGCTCTCTGGAT
AGGGGACATGTGGCTACATGATCGGGCCCACGCTTGAGTAGATGAGAGGGAAAAGGAATATGGTTTTGGTCAGCCTGTTT
GTCAGGGATGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTGAAACAGAGGCAAAAGATTTGCCTC
ATTCATTAATAAAGGAGAAGAGTTTTAGAGTACATGATTAATGGCTTCACATCATAGCCCGTCCGACAACAAAAGAAAGC
AGTAGCTACTCTCGCGGCATGATGATACTCAGATGTCTAGCTCCCGCCGTGACCCAAAGCTTCGCTTCATCTTGGATAAG
TTTTAGAATGTAGAAGGGCGGCGTTGATTTCTTCCTGAAAACTCTAGTGTTTCTCTCGTTCCAAATGACCCAACCAACAA
GCATAGTCAGGGAAGCCATGGCCTTCCGGTTCGCCGTGTTGGGCTTCGACATGTTCGTCCACCAAGACTTGACGTTGTGC
TCCGCCGACCATTGTTGGGTCTCCAGTGCCCCTAGTCCAAGCCACTCCTTTGTCAATCTCCATACACGCAGTGTGAACCT
GCACCGAAAGAAGAGGTGCGCGGCTGTCTCGTTTTCCCTTCTACACAGGGTGCATAGACCGCAATTCTCCCAACCTCGCT
TCTCCAATCTATCCGCTGTCCAGATCCTATTTTGAATCGCCAACCAGGAGAAGAACTTGACCTTGGGAGGTGCCCAAACC
TTCCAAATAGTCTTGTTCATGGTGGTCGTCATGGAGCCCAGGAATTGGATCCTGTATGCGGAGGCCGCTGAGTACTCACC
ATTCGCCTCAAATTTCCAGGAGATATCATCATCAATGTCAGGTAAAAGTTGAAACTGCTCAAGTTGAATCCAAAGGTCCA
TTATGTGTTGTCCGCCGCTGTTGCTTCTAGGCATACGTATACCATGCCCCCCGTATCGTGGTGTCGGTTGGAAAGTGAAA
TTTGAGCAAATCAATTTAAACATGGATCATGATTCTTAACT----------------
>SNPs
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S-----------------------S--
---------------------SS---------------------------------------------------------
--------------------------------------S-------S---------------------------------
--------------------------------------------------------------------------------
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-------------------------------------S---------------------S--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
-------------------------------------------S------------------------------------
----------SSS---------S---------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
-------------S---------------------S--------------------------------------------
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--------S-----------------------S-------------------------S---------------------
S------------------------------S-----------------S------------------------------
---------S-------S---S----------------------------------------------------------
-------------------------------------------------------------------------------S
--------------------------------------------------------------------------------
------------------------------------------------------SS------------------------
---------------------------S----------------------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S-----------S----------------------------
--------------------------S---S--SS-S-------------------------------------------
---------------SS------S--------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
------------------------------S-------------------------------------------------
-------S----S------------------S--------S--------------S------------------------
--------------------------------S-----------------------------------------------
-------------------S------------------------------------------------------------
----------------------------------------------------S-----S---------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
----S------------------------S----S--------------S------------------------------
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-------------------------------------------------------------------------------S
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---S--------S----SSSSS-SSSSSSSSS------------S-----------------------------------
---------------------------------------S---S------------------------------------
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------------------------S------S------------------------------------------------
-----------------------------------------SSSSSSSSSSSSSSSS
>forward_238
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----------------------------------------------------------CGATCGTGCAGTGGATGTTT--
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>reverse_1840
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-------------------------------------------------------------------------------G
GCCGCGTTTCTTCTTTCTG-------------------------------------------------------------
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>forward_1529
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----------------------------------------------------------------------CACCATCTGC
TACGAGGCC-----------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>reverse_3205
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ATCGATCGGGTCCGTAGTCA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
