>input_sequence_47798
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--------------------------------------------------------------------------------
------------------ATGAGCACGCTCCTCCGGCGCATCCTCTGCAGCACGCCCGCCGGCGCCTCCCTCTCCCACCG
CCTCCCCTTCGCCACCTCGTCCCGCCGCACCCCGCACCGCTTCCGCCGCAGCCACCGCGCGCCCAGCCAGTCGCCGTCGC
CCGACGCCGTCTCCGCCGCCGTCGCCTCCCTCCCCTCCCGCCTCACCCCGGCCGTCCTCGCATCCTCCCTCGCCTCCACC
TCTGACCTCCGCCTCCTCTTCCCGCTGCTCACCCACTCCCTCGGCCGGCCCACCTTCCGGCCCGACCCGGGGCCCTTCCT
CGTCGCCGTCAAGCGCCTGGGCGCCGCCCAGCTCTACCACGAGTTCGACCGCACCTGCGCCCTCTTCTTCTCCCTCCTCC
CGTCCCTGCCGTCCCCGGGGCCCCTCCTCAGGGCCGCCCTCTACTTCTACTGCGAGTTCCGCAAGCTCGGCAAGGCGTTC
CACGTCTACACCCTCATGCGCGCCTCCGCCGACCCGGCCGCGCGCCCCGCCGCCGACACCTACCACGCGCTCTTCACGGC
GCTGCTGTCGCGCGGGGGCAACGACTCCATGGTGCACTACATGTACATGGACACCGTCTCGGCGCTGTTCCGGCAGATGC
TGGAGGAGGGCGTCCCGCCGGACACCCGGGCGCTCAACGTGCTCGTCAGGGGCTACGCGCAGTCGCTGCACCTCAACGAC
GCGCTGCGCGTGTTCCACCAGATGGCGCCCGTCTACGGCTGCCAGCCGGACGGCCTCACGTACAGCTACCTGGTGCGCGG
GCTGAGCGCGCAGGGCCGCACCAAGAACGCCCGGGAGCTGTTCGACGAAATGCGGGGCAAAGGGATGATGCCGACGGAGC
CGTCCTGCAACGCGTTCGTCAGCGCGCTCGCCGTGGCCGGGGAGGCCGCGGAGGCCGAGCGGGTGATGTGGGATATGGCC
AGGGCGGGGGCGGTGGTGGATCATATCACGAGGAGGGCGGTGGTGGAGGAGCTGGGGAGGGCCGGGAAGAGGGACGACGC
TGAAAGAGTGGTCAGGGAGATGGAGGAGATGGGCATGCTCAGAGTCGCCGAGCGGCGAGAGCTCCTCGCTTCCATCCAAG
ACGACGAGGACGGCGACGATGGCATGGATGCTGCTGTTGAGAGCACGAGAGGTGGTGATCGGCGACGACGACAAAGT---
TAGCAGAGAATTCAGCAGCTGCATTGGATGTTTTATCTGCATTGGAT---TTTTTTTTTTACTATGATTCTCGAGTATCC
GTTCACAAATGTAAGATGTTTTAGGTATGTCAATATAGTCTATATTTGAATTGAAATGAATGAACAAGCACACTAAAACT
AGAACGTGTCTATATACATTTGATTTAGAAAAAAAGAGGTTACTGTAGGACATCTTATATTTGTGTGGAGGGAGGAACAG
AGTCATGTGTGCAATGTGCCCACAACGATACATGCGAGTTGAAAACGGATCGTGTAATTGAATGTTAGTAAGTTTGAAGA
GTTAAAATATCTTGAATTATCACCTGCAA------------------------------CTACGCGCGAACAACACGTCT
TTTAAACACGGGGTGGAATGAAAG---------------------------------------AGACGAGGA--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr3A_1_TraesCS3A01G273800
GCAGTTATGTTATGTTATGTTCTACTAAGCATCATGTGACACTATAGGATATCAGGATCAACTTTGTATTTCCTCCCTAC
AGCTTATCCGTACATCTATTCACCAATTCTA---GAACTCCTGCCACTTGGTATACCTGGGAAGAAGCAATTTTATTCTC
TTCCTACAAAGGCACCAGT--CAATATGATTGAAAGGTTATGTTTTCACACACCAAATGGACAATTAATTGACTTTTTCT
TCATGCTTCAATAGCGAAACAGCTAACAGGAAGCACATCTCATTTCCCCTAATTTTCATGTACTAAAAATACTCTCTTAG
AGAGGAAGCATCAGCCTATTAGAACACAGCCTGAAGCTCATGAATAGTGGGAAGAAGTCTAAAATTCCATCGAGGCACAG
TTCGTCGACAGGCCAAGTATCC-GCACTATCATCAACCATCTAATCTCAGTAAACGGGGCAGTCAATAG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------AACTGTTTCACGTCGAACTAGACTCTGACGGAGGTTCAATGGAAAATAC
AAATGTGCTAGAATGAAGAAAAAGAGATAACCATATCCAGAATGTCCATGACTTCCTCGATTACATGCCTGTGCACGCCC
CACTT---------ATCTCCGACTGCGGCCGCCGAGACGGCGAGGGCCAGGTCACACCGCCCTGCGCACGGCGGCCAAGC
CTTAGACAGACAGCTCAATCAGAGCATCAGACCGACCGGGCAATGGGTTAGGGCTTACCTCGCGCGAAGAAGCGGAGTGG
CGTGGCGATAGCGCGGCGCGGGCAAGGGCAGTGGAGGAGTCGCCGGAGAGGGCTTGCCAAGGCGACCGCGGCGGCCATCC
TTTCTGCAAGCCGACCAGGCCGCCTGTGCTCTGAGC-CTCTGTGATGTGATGTGAGCGTGCCGTGCTTGGTGGCGGTTGC
CTAACCGGGTGCGGGATTGTGTTGTGCCGTCTGTGGCCTTTTGTGGGTTCTGTGGAGTGTACTGGTGTTGCAGTATCCCC
GCCGCCGCCGCCGCCGCGATGAGCACGCTCCTCCGGCGCATCCTCTGCAGCACGCCCGCCGGCGCCTCCCTCTCCCACCG
CCTCCCCTTCGCCACCTCGTCCCGCCGCACCCCGCACCGCTTCCGCCGCAGCCACCGCGCGCCCAGCCAGTCGCCGTCGC
CCGACGCCGTCTCCGCCGCCGTCGCCTCCCTCCCCTCCCGCCTCACCCCGGCCGTCCTCGCATCCTCCCTCGCCTCCACC
TCTGACCTCCGCCTCCTCTTCCCGCTGCTCACCCACTCCCTCGGCCGGCCCACCTTCCGGCCCGACCCGGGGCCCTTCCT
CGTCGCCGTCAAGCGCCTGGGCGCCGCCCAGCTCTACCACGAGTTCGACCGCACCTGCGCCCTCTTCTTCTCCCTCCTCC
CGTCCCTGCCGTCCCCGGGGCCCCTCCTCAGGGCCGCCCTCTACTTCTACTGCGAGTTCCGCAAGCTCGGCAAGGCGTTC
CACGTCTACACCCTCATGCGCGCCTCCGCCGACCCGGCCGCGCGCCCCGCCGCCGACACCTACCACGCGCTCTTCACGGC
GCTGCTGTCGCGCGGGGGCAACGACTCCATGGTGCACTACATGTACATGGACACCGTCTCGGCGCTGTTCCGGCAGATGC
TGGAGGAGGGCGTCCCGCCGGACACCCGGGCGCTCAACGTGCTCGTCAGGGGCTACGCGCAGTCGCTGCACCTCAACGAC
GCGCTGCGCGTGTTCCACCAGATGGCGCCCGTCTACGGCTGCCAGCCGGACGGCCTCACGTACAGCTACCTGGTGCGCGG
GCTGAGCGCGCAGGGCCGCACCAAGAACGCCCGGGAGCTGTTCGACGAAATGCGGGGCAAAGGGATGATGCCGACGGAGC
CGTCCTGCAACGCGTTCGTCAGCGCGCTCGCCGTGGCCGGGGAGGCCGCGGAGGCCGAGCGGGTGATGTGGGATATGGCC
AGGGCGGGGGCGGTGGTGGATCATATCACGAGGAGGGCGGTGGTGGAGGAGCTGGGGAGGGCCGGGAAGAGGGACGACGC
TGAAAGAGTGGTCAGGGAGATGGAGGAGATGGGCATGCTCAGAGTCGCCGAGCGGCGAGAGCTCCTCGCTTCCATCCAAG
ACGACGAGGACGGCGACGATGGCATGGATGCTGCTGTTGAGAGCACGAGAGGTGGTGATCGGCGACGACGACAAAGT---
TAGCAGAGAATTCAGCAGCTGCATTGGATGTTTTATCTGCATTGGAT---TTTTTTTTTTACTATGATTCTCGAGTATCC
GTTCACAAATGTAAGATGTTTTAGGTATGTCAATATAGTCTATATTTGAATTGAAATGAATGAACAAGCACACTAAAACT
AGAACGTGTCTATATACATTTGATTTAGAAAAAAAGAGGTTACTGTAGGACATCTTATATTTGTGTGGAGGGAGGAACAG
AGTCATGTGTGCAATGTGCCCACAACGATACATGCGAGTTGAAAACGGATCGTGTAATTGAATGTTAGTAAGTTTGAAGA
GTTAAAATATCTTGAATTATCACCTGCAA------------------------------CTACGCGCGAACAACACGTCT
TTTAAACACGGGGTGGAATGAAAG---------------------------------------AGACGAGGAATATACCA
GGGAACTGGCTAAATTC-TTCTTCTC----------------------------------------------------GT
ATTGTTGTGCGTAATATGAGCACC--------AACCTGTTGGGTAGAGCTATGCCGACACAACTCTACGCACGCCT----
---------------------------------------------------TTGACGCCATGGCTGTGGCTGCCGCTTCA
CCTGCCGTGCCAATCGACTCAA-CAAGACTCGCACGCAAATA--GTATCAGCT----------------TACCCTTTCAT
CTTCTGATGAGGTTTTAGTGCAATCCACTGAAATGCAGATAACTCAACAAGAACCTCTTTTCTTTTATTCAGACGAAGAC
TTTTTCGCTCTTGCTTCGAATAAGTTGCTCTTACAAAGTTGCTTTTAGGAATCCCACACGGGGTAAGTTTACAACCAAAA
CCATG--TTTGTCAGGCTCATTCTACTTTAAAGGGGGAGATGGAACGGCTCCACTTATTGTTTCTCCCCCAAATGGATCG
TCTGTAATTTGCTTATTCTTCAGGCTGATCGGACGGAAGCCATTCCAGAGTGTTGCCGGTGGACATAGGCACAATCACCC
CTGAACCGTACGCATAAGTTGCAGGCACTTTCCAGGGGCTCCTTCTCAGAACAATCTTTGATGTGTTCCTTGGGAGTCCA
TAAAAATCTGGCCCATTGAAGCTTGTAAACGCCTCTAGCTTATCAAGAGCACCGACCTGAAACAGGACAAAATATGTCCA
AAAAACAGATTAGTAAGAAATCCTAACATTTTCATGTCGGATAGAGTAGTTCTTTGCCTATAAGATTGTGATAGACTTTT
TGTAGCTGAGACAATTATAACAGTAGTTTCTAGTAAGATGATAACG-ATCCAGGCCAAAGAAAATACTGAACTCCAATGA
GAGAGAGAGAGAGAGAGAGACAGAAATATATTACCTCTTCAAATACCTTCGCATAAAGAGAAAGAGCAACAGGAGCGCTA
TATATTCCTGCACATCCACAGGAACACTCCTTCATCCGTTTATCATGGGGAGCACTGTCAGTGCCAAGAAAGTATTGTCT
GCTCCCACTT
>chr3B_1
GCAGTTATGTTATGTTCTGTTTC---AAGCATCATGTGACACTATAGGATATTAGGATCAAGTTTGTATTTCCTCCCTAC
AACTTATCCGTACATCTATTCACTAATTATATAATAACTCCAGCCACTTGGTATACCTTGGAAGAAGCAATTTTACTCTC
TTCTTACTAAGGCACCAGT--CAATATGATTGAAAGGTTATGTTTTCACACACCAAATGGACAATTCATTGGCTTTTTCT
TCATGCTTCAATAGCGAAACAGCTAACAGGAAGCACTTCTCATTTCCCCTAAGTTTCATGTACTAAAAATACTCTCTTAG
AGAGGAAGCATCAGCCTATTAGAACACAACCTGAAGCTCATGAATAGTGGGAAGAAGTCTCAGATTCCATCGAGGCACAG
TTCCCCGATAGGCCAAGCATCCGGCACTATCATCAACCATCTAATCTCAGTAAACACATCTAATTTCCCCCTAA-TTTTC
ATGTAATAAACCCACTTAGAGAGGAAGTCTGTGAGCCTACTGGAACACAACCTGAAGCTCATGATACTTTCTTAAATTGC
GGAAAGAAACCTCAAGTTCCATTGACGCAGTTAATCAAACACCTCATCCACAAGCCGACTATCCGCATTATCGTCAACCA
TCTAATCTCAGTAAGCGAAACATTCAAACATAACTGTTTCACGTCGAACTAGACTCTGACGGAAGCTCAATGGAAAATAC
AAATGTGTTAGAATGAAGAAAAAGAGATAACCATATCCAGAATGTCCATGACTTCCTCGATTACATGCCTGTGCACGCTC
CCCTTAGCAGACGAATCTCCGACTGCGGCCGCCGAGACGACGAGGGCCAGGTCACACCGCCCTGCGCATGGCGACCAAGT
CTTAGACAAACAGCTCAATCAGAGCATCAGGCCGACCAGGCAATGGGTTAGGGCTTACCTCGCGCGAAGAAGCGGAGTGG
TGTGGGGATAGCGCGGCGCGGGAAAGGGAGGTGGAGGAGTCGCCGGAGAGGGCTTGCCAAGGCGACCGCGGCGGCCATCC
TTTCTGCAAGCCGACTAGGCCGCCTGTGCTTTGGT-GCTATGTGATGTGATGTGAGCGTGTCGTGCGTGGTGGCGGTTGC
CTAACCGGGTGGGGGATTGTGTTATGCCGTCTGTGGCCTTTTGTGGGTTCTGCGGACTGTACTGGTGTTGCAGTATCC--
-CCGCCGCCGCCGCCGCGATGAGCACGCTCCTCCGCCGCATCCTCTGCAGCACGCCCGCCGGCGCCTCCCTCTCCCAGCA
CCTCCCCTTCGCCACCTCCTCCCGCCGCACCCCGCACCGCTTCCGCCGCAGCCACCGCGCGCCCAGCCAGTCGCCGTCAC
CCGACGCCGTCTCCACTGCCATCGCCTCCCTCCCCTCCCGCCTCACCCCGGCCGTCCTCGCATCCTCGCTCGCCTCCACC
TCCGACCTCCGCCTCCTCTTCCCGCTCCTCACCCACTCCCTCGGCCGGCCCACCTTCCGGCCCGACCCCGGGCCCTTCCT
CGTCGCCATCAAGCGCCTGGGCACCGCCCAGCTCTACCACGAGTTCGACCGCACCTGCGCCCTCTTCTTCTCCCTCCTCC
CGTCCCTGCCGTCCCCGGGGCCCCTCCTCAGGGCCGCCCTCTACTTCTACTGCGAGTTCCGCAAGCTCGGCAAGGCGTTC
CACGTCTACACGCTCATGCGCTCCTCCGCCGACCCGGCCGCGCGCCCCGCCGCCGACACCTACCACGCGCTCTTCACCGC
GCTGCTGTCGCGCGGGGGCAACGACTCCATGGTCCACTACATGTACATGGACACCGTCTCGGCGCTGTTCCGGCAGATGC
TGGAGGAGGGCATCCCGCCGGACACCCGGGCGCTCAACGTGCTCGTCAAGGGCTACGCGCAGTCGCTGCACCTCAACGAC
GCGCTGCGCGTGTTCCACCAGATGGCGCCCGTCTACGGGTGCGAGCCGGACGGCCTCACGTACAGCTACCTGGTGCGCGG
GCTGAGCGCGCAGGGCCGCACGAAGAACGCCCGGGAGCTGTTCGACGAAATGCGGGGCAAAGGGATGATGCCGACGGAGC
CGTCCTGCAACGCGTTCGTCAGCGCGCTCGCGGTGGCCGGGGAGGCCGCGGAGGCCGAGCGGGTGATGTGGGATATGGCC
AGGGCGGGGGCGGTGGTGGATCATATCACGAGGAGGGCGGTGGTGGAGGAGCTGGGGAGGGCGGGGAAGAGGGAGGACGC
TGAAAGAGTGGTCAGGGAGATGGAGGAGATGGGCATGCTCAGAATCGCCGAGCGGCGGGCGCTCCTCGCTTCAATCCAAG
ACGACGAGGACGGCGACGATGGCCTGGATGTTGAC---GAAAGCACGAGCGGTGGTGATCGGCGACGATGACAAAGTAGT
TAGCAGAGAATTCAGCAGGTTATATCTGCTTCGGATGA-----GGTT---TTTATTTTTTACTATGATTCTCAAGTATCC
GTTCATAAATGTAAGATGTTTCAGATATTTCAGTATAGATTACGGTCGGATTGAAATGAATGAACAAGCACACTAAAACT
AAAAAGTGTCTACAT-------ATTTAGAAAAG----GGTTACTGTAGAACATCTTATATTTGTGTGGAGGGAGGAACAG
AGTGATGTGTGCAATGTGCCCACAACGATACATGCGAGTTGAAAACGGATCGCGTAATTGAATATTAGTAAGTTTGAAGA
GTTAAAGTGTCTTAAATTATCACCTGCAAAAAGGAATACAGTACTATCTTGAATTATCACTACACGCGAACAACACGTCT
TCTAAACTCAGGGTGGAATGAAAGAGACACCCGCAAAAGAAAAGAAAAAAAAAGGAATGAAAGAGACGACGAATAAACCA
AGGAACTGGCTAAATTCCTTGTTCTC----------------------------------------------------GT
AGTGGTGTGTGTAATATGAGCACCAACATTTGAACCTGTTGGGTAGAGCTATGCCGACACAACACCTGCGCACGG-----
-----------------------------------------------------------ATGGCTGTGGCTGCCGCTTCA
CCTGCCGTGCCAATCGACTCAA-CAAGACTCGCAGGCAAATATAGTATCGCTTACCTGCATATAGCTTGTACCCTTTTAT
CTTATGACGAGGTTTTAGTGCAATCCACTGAAATGCAGATAACTCAACAAGAACCTCTTTTCTTTTATTCAGACGAAGAC
TTTTTCGCTCTTGCTTGGAATAAGTTGTTCTTACAAAGTTGATTTTAAGAATCCCACACGGGGTAAGTCTACAACCAAAA
CCTTG--TTTGTCAGGCGCATTCTACAGAAAGGGGGGAGATGGAACGGCTCCACTTATTGTTTCTCCCCCAAATGGACCG
TCTGTAATTTGCTTATTCTTCGGGCTGATCGGGCGGAAGCCATTCCAGAGTGTTGCCGGTGGACATAGGCACAATCACTC
CTGAACCGTACGCATAAGTTGCAGGCACTTTCCAGGGACTCCTTCTCAGAACAGTCTTTGATGTGTTCCTTGGGAGACCA
TAAAAATCTGGCCCATTGAAGCTTGTAAACGCCTCTAGCTTATCAAGAGCACCGGCCTGAAACAGGACACAATATGTCCA
AGAAACAGATTAGTAGGAAATTTTAGCATTTTCATGTCTGACAGAGTAGTTCTTTGCCCGTAAGATTATGATAGGCTTTT
TGTAGCTAAAGTCATTATGACTGTAGTTTCTAGTAAGATGGTAAGATATCCAGGCCAAACAAAATACTGAACTCCGATGA
GAGA------GAGAGAGAGAGAGAAATATATTACCTCTTCAAATACCTTCGCATAAAGAGAAAGAGCAACAGGAGCACTA
TATATTCCTGCACATCCACAGGAACACTCCTTCAGCCGTTTATCATGGGGAGCACTGTCAGTGCCAAGAAAGTATTGTCT
GCTCCCACTT
>chr3D_1
GCAGTTATGTTATGTTATGTTTC---AAGCATCATGTGACACTATAGGGTATCAGGATCAAGTTTGTATTTCCTCCCTAC
AGCTTATCCGTACATCTATTCACCAATTCTT---TAACTCCTGCCACTTGGTTTACCTTGGAAGAAGCAATTTTATTCTC
TTCTTACAAAGGCACCAAAGCCAATATGATTGAAAGGTTATGTTTTCACACACCAAATGGACAATTCATCGACTTTTTCT
TCATGCTTCAATAGCAAAACAGCTAACAGGAAGCACATCTCATTTCCCCTAAGTTTCATGTACTAAAAATATTCTCTTAG
AGAGGAAGCATCAGCCTATTAGAACACAACCTAAAGCTCATGAATAGTGGGAAGAAGTCTCAAATTCCATCGAGGCACAG
TTCCTCGATAGGCCAAGTATCCG-CACTATCATCAACCATCTAATCTCAGTAAACACATCTAATTTTCCCCTAATTTTTC
ATGTAACATACCCTCTTAGAGAGGAAGTCTATGAGCCTACTGGAACACAACCTGAAGCTCATGATACTTTCTTAAATTGT
GGAAAGAAACCTCAAATTCCATTGAGGCAGTTAATCAAACACCTCGTCCACAAGCCGACTATCCGCATTATCGTCAGCCA
TCTAATCTCAGCAAGCGAAACATTCAAACATAACTGTTTCACGTCGAACTAGACTCTGACGGAAGCTCAATGGAAAATAC
AAATGTGCTAGAATGAAGAAAAAGAGATAACCATATCCAGAATGTCCATGACTTCCTCGATTACATGCCTGTGCACGCCC
CCCTTAGCAGACGAATCTCCGACTGCGGCCGCCGAGACGGCGAGGGCCACGTCACACCGCCCTGCGCATGGCGACCAAGT
ATTAGACAAACAGCTCAATCGGAGTATCAGGCCGACCGGGCAATGGGTTAGGGCTTACCTCGCGCGAAGAAGCGGAGTGG
TGCGGGGATAGCGCGGCGCGGGCAAGGGAAGTGGAGGAGCCGCCGGAGAGGGCTTGCCAAGGCGACCGCGGCGGCCATCC
TTTCTGCAAGCCGACTTGGCCGCCTGTGCTTTGAGCGCTCTGTGATGTGATGTGAGCGTGTCGTGCTTGGTGGCGGTTGC
CTAACCGGGTGGGGGATTGTGT-ATGCCGTCTGTGGCATTTTGTGG---------ACTGTACTCGTGTCGCAGTATCC--
-CCGCCGCCGCCGCCGCGATGAGCACGCTCCTCCGCCGCATCCTCTGCAGCACGCCCGCCGGCGCCTCCCTCTCCCACCG
CCTCCCCTTCGCCACCTCCTCCCGCCGCACCCCGCACCGCTTCCGCCGCAGCCACCGCGCGCCCAGCCAGTCGCCGTCTC
CCGACGCCGTCTCCGCTGCCATCGCCTCCCTCCCCTCCCGCCTCACACCGGCCGTCCTCGCATCCTCCCTCGCCTCCACC
TCCGACCTCCGCCTCCTCTTCCCGCTGCTCACCCACTCCCTCGGCCGGCCCACCTTCCGGCCCGACCCGGGGCCCTTCCT
CGTCGCCGTCAAGCGCCTGGGCGCCGCCCAGCTCTACGACGAGTTCGACCGCACCTGCGCCCTCTTCTTCTCCCTCCTCC
CCTCGCTCCCGTCCCCGGGGCCCCTCCTCAGGGCCGCCCTCTACTTCTACTGCGAGTTCCGCAAGCTCGGCAAGGCGTTC
CACGTCTACACCCTCATGCGCGCCTCCGCCGACCCGGCCGCGCGCCCCGCCGCCGACACCTACCACGCGCTCTTCACCGC
GCTGCTGTCGCGCGGGGGCAACGACTCCATGGTGCACTACATGTACATGGACACCGTCTCCGCGCTGTTCCGGCAGATGC
TGGAGGAGGGCATCCCGCCGGACACCCGGGCGCTCAACGTGCTCGTCAGGGGCTACGCGCAGTCGCTGCACCTCAACGAC
GCGCTGCGCGTGTTCCACCAGATGGCGCCCGTCTACGGCTGCGAGCCGGACGGCCTCACGTACAGCTACCTGCTGCGCGG
GCTGAGCGCGCAGGGCCGCACCAACAACGCCCGGGAGCTGTTCGAGGAAATGCGGGGCAAAGGGATGATGCCGACGGAGC
CGTCCTGCAACGCGTTCGTCAGCGCGCTCGCGGTGGCCGGGGAGGCCGCGGAGGCGGAGCGGGTGATGTGGGATATGGCC
AGGGCGGGGGCGGTGGTGGATCATATCACGAGGAGGGCGGTGGTGGAGGAGCTGGGGAGGGCCGGGAAGAGGGAGGACGC
TGAAAGAGTGGTCGGGGAGATGGAGGAGATGGGCATGCTCAGAGTCGCCGAGCGGCGAGAGCTCCTGGCTTCGATCCAAG
ACGACGAGGACGGCGACGATGGCCTGGATGCTGAC---GAGTGCACGAGAGGTGGTGATCGACGACGACGACAAAGTAGC
TAGCACAGAATTCAGCAGGTTGA----------TATCTGCATCGGATGAGTTTTTTTTTTACTATGATTCTCAAGTATCC
GTTCATAAATGTAAGATGTTTCAGATATTTCAATATAGACTACATTTGGATTGAAATGAATGAACAAGCACACTGGAACT
AAAG--------------------------------------CTGTAGAACATCTTATATTTGTGAGGAGGGAGGAACAG
AGTCATGTGTGCAATGTGCTCACAACGATACATGCGAGTTGAAAACGTATCGTGTAATTGAATGTT---AAGTTTGAAGA
GTTTAAATGTCTTGAATTATCAC-------------------------------------TACGCGCGAACACCACGTCT
TCTAAACACATGGTGGAATG-------------------------------------------------------AACCA
AGGAACTGTCTAGATTCCTTCTTCTCACATTTGTTTTTAACACAATACAGACACAAGTGGGAACGTCTCCTTCTTCTCGT
ATTGGTGAGTGTAATATGAGCACCAACATTTGAACCTGTTGGTAGAGCTATTGCCGACCCAACTCTACGTACGCTTCTTT
GTTCTTTTTTTTTTCCTTTTTTTCTTTTTGCGATGGTGCTCTACGTACGGCTTGACGCCATGGCTGTGGCTGCCGCTTCA
CCTGCCGTGCCAATCGACTCAACCAAGACTCGCAGGCAAATA--GTATCACTTACCTGCATATAGCTTGTACCCTTTCAT
CTTCTGACGAGGTTTTAGTGCAATCCACTGAAATGCAGATAACTCAACAATAACCTGTTTTCTTTTATTCAGATGAAGAC
TTTTTCGCTCTTGCTTCGACCAAGTTGCTCTTACAAAGTTGCTTTTACGAATCCCACACGGGGTAAGTTTAAGACCAAAA
CCATGTTTTTGTCAGGCTCATTCTACAGAAAGGGGGGAGATGGAACGGCTCCACTTATTGTTTCTCCCCCAAATGGACCA
TCTGTAATTTGCTCATTCTTCAGGCTGATCGGACGGAAGCCATTCCAGAGTGTTACCGGTGGACATAGGCACAATCACCC
CTAAGCCGTACGTATAAGTTGCAGGCACTTTCCAGGGGCTCCTTCTCAGAACAGTCTTTGATGTGTTCCTTGGGAGACCA
TAAAAATCTGGCCCATTGAAGCTTGTGAAAGCCTCTAGCTTATCAAGAGCACCGGCCTGAAACAGGACAAAATATGTCCA
AGAAACAGATTAGTGGGAAATCCTAACATTTTCATGTCGGATAGAGTAGTTCTTTGCCTGTAAGATTGTGATAGGCTTTT
TGTAGCTGAGACAATTATAACAGTAGTTTCTAGTAAGATGATAACG-ATCCAGGCCAAAGAAAATACTGAACTCCAATAT
GAGA------GAGAGATAGAGAAAAATATATTACCTCTTCAAATACCTTCGCATAAAGAGAAAGAGCAACAGGAGCACTA
TATATTCCTGCACATCCACAGGAACACTCCTTCATCCGTTTATCATGGGGAGCACTGTCAGTGCCAAGAAAGTATTGTCT
GCTCCCACT-
>SNPs
---------------------SSSSS-----------------------------------S------------------
----------------------------------S-----------------------S---------------------
---S--------------------------------------------------------------S-------------
----------------------------------------------------S---------------------------
----------------------------S-------------------------------S-------------------
---S----S----------------------------------------------SSSS-SSSSSS-SS-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S-S--------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------S----S-----S
--------S---------------------S-------------------------------------------------
S----S----------------------S---------------------------------------------------
---------------S--------------S-----------------------------S-------------------
-----------S-----------S----------------------------S---S---------------------SS
S----------------------------------S--------------------------------------------
------------------S-----------------------------------------------------------S-
----------------S---S-----------------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------S-----
------------------------------------------------------------------------S-------
-----------------------S---------SSSSS------------------------------------------
------------------S-SS-S-SSSSS-SS---------S-----------------------------S-------
-----S---------------S--S---S---------S---S-----S-------------------------------
-S--S-------S--SSSSSSS----------SSSSS-----------S-------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
-S-------S-----------------------------------------------------------S-----S----
S-------------------------------------------------------------------------------
----S----S-----------------------------------------------------------S----S-----
--------------------------------------------------------------------------------
----------------------------------S---------------SS----------------------------
-------S------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------SSS--S---------------------------------------------S--
--------------------------------------------------------------------------------
-----------------------------------------------------S----------------------S---
------------------------------------------------------S-------------------------
-S-------------S-------------------------------------------S--------------S-----
--------------------------------------------------------------------------------
----SSSSSS----------S-------------------------------------------------------S---
--------------------------------------------------------------------------------
----------
>forward_1173
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------TGGCCTTTTGTGGGTTCTGT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_2355
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------TGTTGAGAGCACGAGAGGTG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_1200
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------ACTGGTGTTGCAGTATCCCC
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_2356
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------GTTGAGAGCACGAGAGGTGG-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_1201
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CTGGTGTTGCAGTATCCCC
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_2357
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TTGAGAGCACGAGAGGTGGT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_1758
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------TACCACGCGCTCTTCACG--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_3389
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TAAAGGGGGAGATGGAACGG--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
