>input_sequence_47781
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-ATGGCGAGTGAAGCCATGCCCAACCCTTTCGCTCCTCTCACCAACCAGCCGCAGCAGCAGCCG---CCGTCCCATGAAC
ACCCTGCCGCTCCTCCCCCGAAGAAGAAGCGCAATCTCCCCGGCACACCAGGTAATAAGTCCAAC---CTCAGTACGTAT
ATCCCCTGCAGCAGAGCTGCAGCTGCATGCATGTTGTCTGTTTGCAAATTCCAACCGGTGGTCGATCGATCGTGTGCGCT
GCAGACCCAGACGCGGAGGTGATCGCGCTGTCGCCGCGGACGCTGATGGCGACGAACCGCTTCGTGTGTGAGATCTGCGG
CAAGGGGTTCCAGCGTGACCAGAACCTGCAGCTGCACCGGCGCGGCCACAACCTCCCCTGGAAGCTGCGGCAGCGGAGCG
GCAAGGAGCCGCGGAAGCGCGTCTACGTCTGCCCCGAGAAGAGCTGCGTCCACCACAACCCGTCCCGCGCGCTGGGCGAC
CTCACCGGGATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCGCCAAGCGCTACGC
CGTCCAGTCCGACTGGAAGGCCCACTCCAAGACCTGCGGCACGCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCTCCA
GGCGGGACAGCTTCATCACGCACCGCGCCTTCTGCGACGCGCTCGCCGAGGAGACGGCCAGGCTCACGGCCGCCACTTCG
GGCGCCGCGGTGGCGGCCGTGCCGTCCATGTGCGGCGGCGGGCAGGGATACCTCTTCGCCAGGCCGAACAGCATGATGCT
CCAGCCGCCGGTCGCCCCGCACCTCAAGCCTGCT---GCGGGAGGGCAGATGCTCGGCCACGCGGCGGGCGCCGTCGCTG
ACTCGCTCTGCGACGGCGCCGTGGCGAGGCACGGAGGGCTCTCGCTGTGGGGCAGCGACAACACGCTGCCGTCCTCCATG
GGCCACCACATTGGAGGTCTCATGTCGTCCGGTGGTGGC------GGCGCGCCAATGCCAATGCAGATGTACGCGGATCT
CTTCGCGCCGAGCTCCGGTGCGCCGCCTCAGTTCGACATGGCGCAGCTGAGCTGGCTGTACGGGAACAACGGCGGCAACG
GGAAGCTCTCGTCATCTAACGCCAGCGAGCTGACGACTAACTCCTCCAGAGAGGCGGACAGCGCGCCGTCCGTGTTCAGC
GGCCAGCAGCACGCGAAGCCGGCCGCGGCGCCCACCGACATGTCGGCGACGGCCCTGCTGCAGAGAGCCGCGCAGATCGG
CTCCGTCACGTCCTCCAACACCTCGATGCCGCTCGCGGGGGCCTTCGAGCAGGCGCCCAACTCCGCCGGGCGGATCGACG
AGCGCAGCAAGTTCGACGACAGAGCTCTTTTCGGCACGAGCCAGCACCAGCATAATGCTAACGTCCCGAGCGCAATGAGC
GAGCTCACTGCGGCCACCGCGAACGTGCCGTACGACGTGTTCTCGGCAGCGCGCCACGCCGGCCTCAAGGATGCCGTCGG
GAGGGAGGAGACCAGGGACTTCCTGGGCGTCGGCATGCAAGCACTCTGCTCATCATCGATGCATGGGTGGATTTAG----
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>chr3A_1_TraesCS3A01G170700
AAAGGAGTGCGCATGCTGTGGGTCCAGGTCAGAGCAGACCATGCAGTGCAGAGTTTGTGCA-GCGCTCCAGAGCCCAGAG
CGGCGGCATAGTTGGTTCTTTCGCAAAGGGCAGGAGAGGAGCAGCACATTATGGGCTAATCATGCCAAATGCAAAGGCAC
CAAGCCCCAGCTTTTTACCGCCCTTTGATGATCCCCCCCTTTTCCCTATCTTTCTCCTC---------------------
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-----------ATCATATGTGTCATCATGCATTGCACACCCACACACTAAACACGCACTCCTTTTCAACTTTCACCCTTT
TACCACTCCAAATATTTTATACTCCAAACACTAGCTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAGTCTCCGTCTCACTAACCCAGTTCCGCTCTCCCGCTCTCTCCTATATTAGTCCAGCTGCTGGTATTGTTGCTTCCAC
TA---GCTTAGATTGCTTGAGTGATGCCCCACACCGACCTAAGAACAAAAGTTGTCCTTTTGTCTCCAAATCAAGACTAG
TTAAGCACCGGCAGTACGTCGACCAACAAGAACAATCTCATCGAGAGCTAGCAAGACA-----CCAAGAAGGAGCACAAT
AATGGCGAGTGAAGCCATGCCCAACCCTTTCGCTCCTCTCACCAACCAGCCGCAGCAGCAGCCG---CCGTCCCATGAAC
ACCCTGCCGCTCCTCCCCCGAAGAAGAAGCGCAATCTCCCCGGCACACCAGGTAATAAGTCCAAC---CTCAGTACGTAT
ATCCCCTGCAGCAGAGCTGCAGCTGCATGCATGTTGTCTGTTTGCAAATTCCAACCGGTGGTCGATCGATCGTGTGCGCT
GCAGACCCAGACGCGGAGGTGATCGCGCTGTCGCCGCGGACGCTGATGGCGACGAACCGCTTCGTGTGTGAGATCTGCGG
CAAGGGGTTCCAGCGTGACCAGAACCTGCAGCTGCACCGGCGCGGCCACAACCTCCCCTGGAAGCTGCGGCAGCGGAGCG
GCAAGGAGCCGCGGAAGCGCGTCTACGTCTGCCCCGAGAAGAGCTGCGTCCACCACAACCCGTCCCGCGCGCTGGGCGAC
CTCACCGGGATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCGCCAAGCGCTACGC
CGTCCAGTCCGACTGGAAGGCCCACTCCAAGACCTGCGGCACGCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCTCCA
GGCGGGACAGCTTCATCACGCACCGCGCCTTCTGCGACGCGCTCGCCGAGGAGACGGCCAGGCTCACGGCCGCCACTTCG
GGCGCCGCGGTGGCGGCCGTGCCGTCCATGTGCGGCGGCGGGCAGGGATACCTCTTCGCCAGGCCGAACAGCATGATGCT
CCAGCCGCCGGTCGCCCCGCACCTCAAGCCTGCT---GCGGGAGGGCAGATGCTCGGCCACGCGGCGGGCGCCGTCGCTG
ACTCGCTCTGCGACGGCGCCGTGGCGAGGCACGGAGGGCTCTCGCTGTGGGGCAGCGACAACACGCTGCCGTCCTCCATG
GGCCACCACATTGGAGGTCTCATGTCGTCCGGTGGTGGC------GGCGCGCCAATGCCAATGCAGATGTACGCGGATCT
CTTCGCGCCGAGCTCCGGTGCGCCGCCTCAGTTCGACATGGCGCAGCTGAGCTGGCTGTACGGGAACAACGGCGGCAACG
GGAAGCTCTCGTCATCTAACGCCAGCGAGCTGACGACTAACTCCTCCAGAGAGGCGGACAGCGCGCCGTCCGTGTTCAGC
GGCCAGCAGCACGCGAAGCCGGCCGCGGCGCCCACCGACATGTCGGCGACGGCCCTGCTGCAGAGAGCCGCGCAGATCGG
CTCCGTCACGTCCTCCAACACCTCGATGCCGCTCGCGGGGGCCTTCGAGCAGGCGCCCAACTCCGCCGGGCGGATCGACG
AGCGCAGCAAGTTCGACGACAGAGCTCTTTTCGGCACGAGCCAGCACCAGCATAATGCTAACGTCCCGAGCGCAATGAGC
GAGCTCACTGCGGCCACCGCGAACGTGCCGTACGACGTGTTCTCGGCAGCGCGCCACGCCGGCCTCAAGGATGCCGTCGG
GAGGGAGGAGACCAGGGACTTCCTGGGCGTCGGCATGCAAGCACTCTGCTCATCATCGATGCATGGGTGGATTTAGTTTA
AGGTGGCATA-CATGTTAATCATGTAACCGTGGTGATACGAGGAGTAGTGTTTAATT---CATCCGCGGCCATGTAAGCA
CGAACCAT----GCATGCATGCTCGTATGCAACTTTACAAAATACCACAAGGCATCATTCCGTTTCAATTGGTTTACTCA
GCTCAGCTGTCATTTCTTGTCTTAGCCAGCACATCATTCATAATTTTGTTACTTACAGTACTTGATGGTATCTGTCTATC
TGAACCATTCACTGCTCGATTAGTGCCAGTGGAACTTAACCTCATATGGAGAAGAACTGAAGCAATATATGGCTGCAATG
GCAGGCAAGTTGAAGAG-AAAAAGGGTGGCAGAGATCCATGCATGCACAT--------TCTCAACAACTATTGTCTATCT
TCTCACAAAACAAAAAAAAAAACAAAAAAACTATGGTCTATCTCCTTGGCGAAGAAAAATAAAAGGGAGACACTGAATCC
TTTTTCAGACAAAATAAAAAAGAACCATTGATCAAAGAGTAGCTCCCTTTAGTTTATTACTTTGGTCTCAAGAAAAGAAA
GCCAGTCCACCACTTTACAACGCTATTATTGCACAAACCAAATTACCTTTTCAGTGCAGCTAGCTGTCTAGCTATATAGC
TTGATCTTGTTTGAACATTTGTGCAATGTTATTCCTAGCCATAGTGGCACAT----------------------------
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----------------ATACATAAAGGAGGATCTTTGCCCCTAATAATCAACAAGATTTAAGTTGCTATCTTGATGTGCT
TGTCCAAATGTCAAAGAGTCTGAGGTTCAACCAAGCCCAAAAGGGAACTTGAAACATAGCAATGGGGTGCCCAATAACCT
AGCAACAATAAGGATAGGTGGTTATCCAATTAAGGAGAGGCACTACTGTTTTGAATGGCTGCCTTCCAGATCTTTT--TT
T-ATTAATAATTAGCCAGTGGTGCGCATCCAGACCACATTGGCTAGTGCTGCTTAACTTAATTGTCTATTTGTCTGCATG
CTCTTAGTGCATTTTGGTTG
>chr3D_1
AAAGGAGTGCGCATGCAGTGGGTCCAGGTCAGAGCAGACCATGCAGTGCAGAGTTTGTGCAGGCGCTCCAGAGCCCAGAC
CGGCGGCATAGTTGGTTCTTTCGCAAAGGGCAGGAG-----CAGCACATTATGGGCTAATCATGCCAGATGCAAAGGCAC
CAAGGCGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNATCATATGTGTCATCATGCATTGCACACCCACACACTAAACACGCACTCCTTTTCAACTTTCACCTTTT
TACCACTCCAAATATTTTATACTCCAAACACTAGCTACTCTCTCTCTCTCT----------------CTCTCTCTGGT--
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--AGTCTCCGTCTCACTAACCCAGTTCCCCTCTCTTGCTCTCTCCTATATTAATCCAGCTGCTGGTATTGTTGCTTCCAC
TACTAGCTTAGATTGCTTGAGTGATGCCCCACACCGACCTAAGAACAAAAGTTGCCCTTTTGTCTCCAAATCAAGACTAG
TTAAGCACCAGCAGCACGTCGACCAACAACAACAATCTCATCGAGAGCTAGAAGGACA-----CCAAGAAGGAGCACAAT
AATGGCGAGTGATGCCATGGCCAGCCCTTTCGCTCCTCTCACCAACCAGCCGCAGCAGCAGCAG---CCGTCCCATGAAC
ACCCTGCCGCTCCTCCCCCGAAGAAGAAGCGCAATCTCCCCGGTACACCAGGTAATAAGTCCAAC---CTCAGCACGTAT
ATCCCCTGCAGCAGAGCTGCAGCTGCATGCATGTTGTCTGTTTGCAAATTCCAACCGGTGGTCGATCGATCGTGTGCGCT
GCAGACCCTGACGCGGAGGTGATCGCGCTGTCGCCACGGACGCTGATGGCGACGAACCGGTTCGTGTGCGAGATCTGCGG
CAAGGGATTCCAGCGCGACCAGAACCTGCAGCTGCACCGGCGTGGCCACAACCTCCCCTGGAAGCTGCGGCAGCGGAGCG
GCAAGGAGCCGAGGAAGCGCGTCTACGTCTGCCCCGAGAAGAGCTGCGTCCACCACAACCCGTCCCGCGCGCTGGGCGAC
CTTACCGGGATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCGCCAAGCGCTACGC
CGTGCAGTCCGACTGGAAGGCCCACTCCAAGACCTGCGGCACGCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCTCCA
GGCGGGACAGCTTCATCACGCACCGCGCCTTCTGCGACGCGCTCGCCGAGGAGACCGCCAGGCTCACGGCCGCCACTTCG
GGCGCCGCGGCGGCGTCCGCGCCTTCCATGTGCGGCGGCGGGCAGGGATACCTCTTCGCCAGGCCGAACAGCATGATGCT
CCAGCCGCCGCTCGCCGCGCACCTAAAGCCTGCT---GCGGGAGGGCAGATGCTCGGCCACGCGGCGGGTGCAGTCGGGG
ACCCGCTCTGCGACGGCGCCGCTGCGAGGCACGGCGGGCTCTCGCTGTGGGGCAGCGACAACACGCTGCCGTCCTCCATG
GGCCACCACATTGGCGGTCTCCTGTCGTCCGGTGGTGGTGGTACTGGCCCGCCAATGCCAATGCAGATGTACGCGGATCT
CTTCGCGCCGAGCTCCGGTGCGCCGCCTCAGTTCGACATGGCGCAGCTGAGCTGGCTGTACGGGAACAACGGCGGCAACG
GGAAGCTCTCGTCATCTAACGCCAGTGAGCTGACGACTAACTCCTCCAGAGAGGCGGACAGTGTGCCGTCCGTGTTCAGC
GGCCAGCAGCACGCAAAGCCGGCCGCAGCTCCCACCGACATGTCGGCGACGGCGCTGCTGCAGAGAGCCGCGCAGATCGG
TTCCGTCAGGTCCTCCAACACCTCGATGCCGCTCGCGGGGGCCTTCGAGCAGGCGCCCAACTCCGCCGGGCGGATCGACG
AGCGCAGCAAGTTCGACGACAGAGCTCTTTTCTGCGCGAGCCAGCACCAGCACAATGCTAACGTCCCCAGTGCAATGAGC
GAGCTCACGACGGCCACAGGGAACGTGCCGTACGACGTGTTCTCGGCCGCGCACCACGCCGGCCTCAAGGACGCCGTCGG
GAGGGAGGAGACCAGGGACTTCTTGGGCGTCGGCATGCAAGCACTCTGCTCATCATCGATACATGGGTGGATTTAGTTTA
AGCG-----TGCATGTTAATCATGTAACCGTGGAGATACGAGGAGTAGTGTTTCATGAGCCATCCGCGGCCATGTAGGCA
TGAACCATACATGCATGCATGCTCGTATGCAACTTCACAAAATACCACAAGG---CATTCCGTTTCAATTGGTTTACTCA
GCTCAGCTGTCATTTCTTGTCTTAGCTAGGACATCATTCATGATTTTGTTACTT---GTACTTGATGGA--------ATC
TGAACCATTCAATGCTCGATTAGTGCCAGTGGAACTTAACCTCATATGGAGAAGAACTGAAGCAAT----GGCTGCAATG
TCAGGCAAATTGAAGAG-AAAAGGGTGGCAAGAGATCCATGCATGCATAT--------TCTCAAG---------------
----------------------------AACTATGGTCTATCTTCTTCGCGAAGAAAAATAGAAGGGGGACACTGAATCC
TTTTTCAGACAAAAAAAA---GAACCATAGATCAAAGAGTAGCTCCCTTTAGTTTATTACTTTGGTCTCAAGAAAAGAAA
GCCAGTCCACCACTTTACAACTCTATTATTGCAGAAACCAAATTACCTTTTCAGTGCAGCTAG----CTATCTATATAGC
TTGATCTTGTTTGAACACTTGTGCAATGTTATTCCTAGCCATAGTGACACATTAAACTCATTAAGCTACGCGTGAAGGGC
GGCCAACGAGCTATGCCACGTGGCGCAAGCTGGTTGGCCACGGTGAGAAATCTTTTGTTTTTTTAGATGAAGGTGTGGAT
TATTTTTTAAATGCACATTTTCTTTTTAGATGGAGGTGAGGACCTCTTACATTTTTTAAATGAAGGTTATGCAAAGTGGC
ACTCGCTGGTAGGTTGCGGTGGTAATTTTTTTAATACTTTTTTTAGATGAAGGTGAGAATTTTTTCTGAAATATTTTTTT
GGACGGAGGCGAGAACTCTATGTATTTTTTGTAGATAAAAACATGCGCACAACTTTCTCTTAAGCGGCGCCACAGGGTGG
CGCCCCAACCACTAGTATACATAAAGGAGAATCTCTGCCCCTAATAATCAACAAGATTTAAGTTGCTATCTTGTTGTGCT
TGTCCAAATGTCAAAGAGTCTGAGGTTCAAGCAACCCCAAAAGGGAACTTGAAACGTAGCAATGGGGTGCCCAATAACCT
AGGAACAATATGGATAGGTGGTTATCCAAGTAAGGAGAGGCACTACTGTTTTGAATGGCTGCCTTCCAGATCTTTT--TT
TGATTAATAATTAGCCAGTGGTGCGCATCCAGACCACATTTGCTAGTGCTGCTTAACTTAATTGTCTATTTGTCTGCATG
CTCTTAGTGCATTTTGGTTG
>chr3B_1
AAAGGAGTGCGCATGCAGTGGGTCCAGGTCAGAGCAGACCATGCAGTGCAGAGTTTGTGCA-GCGCTCCAGAGCCCAGAC
CGGCGGCATAGTTGGTTCTTTTGCAAAGGGCAGGAGAGGAGCAGCACATTATGGGCTAATCATGCCAAATGCAAAGGCAC
CAAGCCGCAGCTTTTTACCGCCCTTTGATGATCCCC-CCTTTTCCCTATCTTTCTCCTC---------------------
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-----------ATCATATGTGTCATCATGCATTGCACACCCACACACTAAACACGCACTCCTTTTCAACTTTCACCTTTT
TACCACTCCAAATATTTTATACTCCAAACACTAGCTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGT--
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--AGTCTCCGTCTCACTAACCCAGTTCCCCTCTCTTGCTCTCTCCTATATTAATCCAGCTGCTGGTATTGTTGCTTCCAC
TACTAGTTTAGATTGCTTGAGTGATGCCCCACACCGACCTAAGAACAAAAGTTGCCCTTTTGTCTCCAAATCAAGACTAG
TTAAGCACCAGCAGTACGTCGACCAACAACAACAATCTCATCAAGAGCTAGCAAGACACCAAGCCAAGAAGGAGCACAAT
AATGGCGAGTGAAGCCATGCCCAACCCTTTCGCTCCTCTCACCAACCAGCCGCAGCAGCAGCAGCCGCCGTCCCATGAAC
ACCCTGCCGCTCCTCCCCCGAAGAAGAAGCGCAATCTCCCCGGCACACCAGGTAATAAGTCGTCCAATCTCAGTACGTAT
ATCCCCTGCAGCAGAGCTGCAGCTGCATGCATGTTGTCTGTTTGCAAATTCCAACCGGTGGTCGATCGTGTGCACTGACT
GCAGACCCTGACGCGGAGGTGATCGCGCTGTCGCCGCGGACGCTGATGGCGACGAACCGGTTCGTGTGCGAGATCTGCGG
CAAGGGGTTCCAGCGCGACCAGAACCTGCAGCTGCACAGGCGCGGCCACAACCTCCCCTGGAAGCTGCGGCAGCGGAGCG
GCAAGGAGCCGAGGAAGCGCGTCTACGTCTGCCCCGAGAAGAGCTGCGTCCACCACAACCCGTCCCGCGCGCTGGGCGAC
CTCACCGGGATCAAGAAGCACTTCTGCCGCAAGCACGGCGAGAAGAAGTGGAAGTGCGACAAGTGCGCCAAGCGCTACGC
TGTCCAGTCCGACTGGAAGGCCCACTCCAAGACCTGCGGCACGCGCGAGTACCGCTGCGACTGCGGCACCCTCTTCTCCA
GGCGGGACAGCTTCATCACGCACCGCGCCTTCTGCGACGCGCTCGCCGAGGAGACGGCCAGGCTCACGGCCGCTAGTTCA
GGCGCCGCGGTGGCGGCCGTGCCGTCCATGTGCGGCGGCGGGCAAGGATACCTCTTCGCCAGGCCGAACAGCATGATGCT
CCAGCCGCCGCTCACCGCGCACCTCAAGCCTGCCGCCGCAGGAGGGCAGATACTCGGCCACGCGGCGGGCGCCGTCGGGG
ACCCGCTCTGCGACGGCGCCGCGGCGAGGCACGGAGGGCTCTCGCTGTGGGGCAGCGACAACACGCTGCCGTCCTCCATG
GGCCACCACATTGGCGGTCTCCTGTCGTCCGGTGGTGGTGGTACTGGCGCGCCAATGCCAATGCAGATGTACGCGGATCT
CTTCGCGCCGAGCTCCGGTGCGCCGCCTCAGTTCGACATGGCGCAGCTGAGCTGGCTGTACGGGAACAACGGCGGCAACG
GGAAGCTCTCGTCATCTAACGCCAGCGAGCTGACGACTAACTCCTCCAGAGAGGCGGACAGCGCGCCGTCCGTGTTCAGC
GGCCAGCAGCACGCGAAGCCGGCCGCGGCGCCCACCGACATGTCGGCGACGGCGCTGCTGCAGAGAGCCGCGCAGATCGG
CTCCGTCACGTCCTCCAACACCTCGATGCCGCTCGCGGGGGCCTTTGAGCAGGTGCCTAACTCCGCCGGGCGGATCGACG
AGCGCAGCAAGTTCGACGACAGAGCTCTTTTCGGCGCGAGCCAGCA------CAATGCTAACGTCCCCAGCGCAATGGGC
GAGCTCTCGGCGGCCACCGGGAACGTGCCGTACGACGTGTTCTCGGCCGCGCGCCACGCCGGCCTCAAGGACGCCGTCGG
GAGGGAGGAGACCAGGGACTTCTTGGGCGTCGGCATGCAAGCGCTCTGCTCATCATCGATAAATGGCTGGATTTAGTTTA
AGCCTGGCATGCATGTTAATCGTGTAACCGTGGAGATACGAGGAGTAGTGTTTCATGAACCATCCGCGGTCATGTAAGCA
TGAACCA----TGCATGCATGCTCGTATGCAACTTTACAAAATACCACAAGG---CATTCCGTTTCAATTGGTTTACTCA
GCTCAGCTGTCATTTCTTGTCTTAGCCAGCACATCATTCATGATTTTGTTACTTGTAGTACTTGATGGA--------ATT
TGAACCATTCAATGCTCTATTAGTGCCAGTGGAACTTAACCTCATATGGAGAAGATCTGAAGCAAT----GGTTGCAATG
CCAGGCAAATTGAAGGGAAAAAGGGTGGCAAGAGATCCATGCATGCATATTCAGATATTCTCAAG---------------
----------------------------AACTATGGTCTATCTTCTTCGCGAAGAAAAATAAAAGGGAGACACTGAATCC
TTTTTCAGACAAAAAAAAA--GAACCATTGATCAAAGAGTAGCCCCCTTTAGTTTATTACTTT-GTCTCAAGAAAAGAAA
GCCAGTCCACCACTTTACAACTCTATTATTGCACAAACCAAATTACCTTTTCAGTGCAGCTAG----CTATCCATATAGC
TTGATCCTGTTTGAACATTTGTGCAATGTTATTCGTAGCCATAGTGGCACA-----------------------------
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-----------------------AAGGAGGATCTTTGCCCCTAATAACCAACAAGATTTAAGTTGATATCTTGTTGTGCT
TGTCCAAATGTCAAAGAATCTGAGGTTCAAGCAAGCCCAAAAGGGAACTTGAAACATAGCAATGGGGTTCCCAATAACCT
AGCAACAATAAGGATAGGTGGTTATCCAATTAAGGAGAGGCACTACTGTTTTGAATGGCTGCCTTCTAGATCTTTTTATT
T-ATTAATAATTAGCCAGTGGTGCGCATCCAGACCACATTGGCTAGTGCTGCTTAACTTAATTGTCTATTTGTCTGCATA
CTCTTAGTGCATTTTGGTTG
>SNPs
----------------S--------------------------------------------------------------S
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------S-----------------------------S-------------------------------------------
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----------------------------------------------------------------------------S---
---------------------------------------------------------------------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS--------------------------S-----SS----------------S---------------------------
------------------------------------------------------S-------------------------
---------S-------------------S--------------------------------------------------
--------------------------------------------------------------S-----------------
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--------S--------------------------------------------------S--------S-----------
---------------S----------------------------------------------------------------
-----------S--------------------------------------------------------------------
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----------S-----S------------------------------------------------------------SS-
--S------------------S----------------------------------------------------------
--------------S------S----------------S-----------------------------------------
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-----------------------------------------------------S--------------------------
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-----------------------------------S----------------S--------------S------------
--------S----------S---------------------------S-----------------------S--------
----------------------S-------------------------------------S-------------------
--SSS-SSSS-----------------------S-------------------S--S-----------------------
S---------------------------------------------------SSS-------------------------
-----------------------------------------S------------SS------------SSSSSSSSS---
-----------S------------------------------------------------------SSSS----------
S-------S-------------S--SS-SS-----------------S----------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------S---S--------------------------------
--------------S----SS-----------------------------------------------------------
---------------------S-----------------------------------------SSSS---S---------
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------------------------------S-------------------------------------------------
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>forward_1235
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---------------CTAACCCAGTTCCGCTCTCC---------------------------------------------
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>reverse_3094
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-----------------------------------------------------AATTCATCCGCGGCCATGTA-------
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