>input_sequence_47672
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------ATGT
GTGGCTGGTGCGGCTGCCTCGAGTGCATCCATAACATCCCTCCCCTCAATCTCCTCTTCCTCCACTTCTCCTCGGCTGCA
CGGACGGGAAGGGAGGGAGAAGAAGGAGCGCGAACGCTCAGCCCCATGGCCTCCATCTCGGTCCCGGACCCCGCCCCTTC
CCCGACCGAGGATGCAGAGAGCATCAGAAAAGCAGTGCAAGGTAAGTACTTACGAAGATTCAATCAAGTTTAC-TCCATT
G-------------------------------------------------------------------------------
-------------------------------------------------------------------------ATTGATG
TTGTTGTTTTT-GCTCTACCGCAAGAAGAACCTGTGCTGAGATCGTG--AGAAATGGGCAGGGTGGGGGACGGACGAGAA
CGCGCTGATCGAGATCCTGGGCCACCGGACGGCGGCGCAGCGCGCGGAGATCGCCGTCGCCTACGAGGGCCTCTACGACA
AGCCCCTCCTCCGCACGCTCCAGGACGAGCTCTCCAGCCACTTCAAGGTAACATACACCTTCGCCTCCTCCATGGCCGGC
GGGCTCCTAGGCTTCTTCCTTCGTCCCCGGCCGGACACCGTCCGAAATCTAATCTCCATGCCTGCGCGTTGGTCTGGTCC
GGTGGTCTCAGGGCGCGATGACGCTGTGGGCGATGGACCCGGCGGCGCGGGACGCCAAGCTGGCCTACAAGGCCCTCAGG
AAGAAGGGCGGCGACCGGCACGCCTGGGTGCTCATCGAGGTCGCCTGCGCGTCGTCGCCGGACCACCTCGTCGCCGTCAG
GAAGGCCTACTGCTCCGCCTACGACTCGTCGCTCGAGGAGGACGTCGCCGCCTGCCCGCTCTACAAGGACCCCCTCAAGC
AGGCAAGGCCGTGCCGATCCTGGCATTCTCCTTC--TTTCGTCGCCGCCGTGGGTCCATTTCTTGCTCTTGCCGTTGCCG
GTCAGTTGAACTGAGCGCTCGTGTGCGTGTGCGTGTGCAGTTCTTGGTGCGCCTGGTGAGCTCGTACCGCCACGGCGGCG
AGCACGTCGACGGCGAGCTGGCGAGGGCCGAGGCGGCCGAGCTGCACGGCGCGGTGGCGGCCAAGAAGCAGCCGCTGCAC
GGGGACGTGGTCCGCATCGTCAGCTCCAGGAGCAAGCCGCAGCTCAAGGCGACGTTCCAGCACTACAAGCGAGAGCACGG
CAAGGCCATCGACGAGGTCTACTTCAT-------CATCATTTTTCTACGGTTAAAAAAAC-CTGAGCACACAAAATGAAC
TA-----TATCTATTTTGATGCGC--------CACAGGTTCTCGAGGGCAATCGCAACGACAAGCTGTCGGCGATGCTGA
AAACTGCGGTCTGGTGCCTGACATCGCCGGAGAAGCACTTCGCAGAGGTAATACTCAAAAG----CTCAACCTTTTCCAG
GCTGCTTCAGTTCCGATGCTCTTCATGGCTCTGCCTTTTCCAGGTGATCCGGAGCTCGATCATCGGGCTCGGCACCGACG
AGGAATCCCTGACCAGAGCGATTGTCTCGCGCGCCGAGGTCGACTTGAAGAAAGTGAAGGAGGAATACAAGGTGAGGTAC
AAGACGACGGTGACCAAGGATGTCGTCGGAGACACCTCCGGGTACTACCAGGGCATCCTGCTCACCCTCATCGGGGCCGA
GTAG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>chr1A_1_TraesCS1A01G239700
GAGATTTGTTTGGAGCTCTCTTTTGGAAGGAAACCTTACCGGTTAAGCAATGCCCATGTGTTCCCAAGATTCTTCTTCCA
GCGTGAGAATGTCTGT--------------------TTTTTATCATTGTTGCTGCTAAACTCCTGTGTTGTTGCACATGC
T-------GATCTTCCCAAATAGTGGTGGGTGAGTGGGAGGAACAGCTGGTTTGAAGCTGCAGAA-GGAATAGAGAGTGG
AGAGGAGAAATAAATTCATGAAGGCGCCTGTAGCTCAGTGGATAGAGCGTCCGTTTCCTAAGCGGAAAGTCGTAGGTTCG
ACCCCTACCTGGCGCGTTCGCCTACTGTTTTTTTTTTGTCTCTTTTCTTTTGTGCTTAGTTGGTGCACTGTTTTTGAAGC
GA--TTTTTTTTTATTTCCCAAGAAGAGGAGAGTAGAAGAGATGGTATGAACA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AGTATGAAAC
ATGTAAAAAAAATGGTGTGTAAATGGTACTCCTACTAATTTTCTT-------------------------TAACGCTCAG
GTTCCAGTAAGAACACTCGCAAAAAAAAAAAAAGGTTCCAGTAAGAAGATGGTGAGGACAAGTCTGAAAACACCCCAAGA
TCTGAATAAGATACTAGAT-----------------------------------TACAGTACAGCATGAGCAAGTCTG-A
AAATAGATGAGGCAAGCCTTAACTTAAGAATTATTACAACGTGTGCTATAAGGCGGAAAAGGGAACAATTCATTAAG---
--TATTACTCACCCTTTTCCAGCAAACAAATCTAAATACCTCTCCAATGCTGATTAAGTAGGAGCAATGAACATACCCAA
AATGCCCCTCGCATGACCTGTACA---CAACATCAGCCAGGCTACTTACCCCATTACATTACAAGCTGGATAACAGTGGC
ACCATTAAAACTCATGACTAAGAACCTAAAATGAGCCAAGAAAAACACAATCAAAAGATGCACACGCGAAACACACGAGG
AAATAATTAGGCAAAAAGCCCATTGCCGGCGAAGCTTTCAACCCTGGTGGTGTGCTGTGGTGTCTGTGTGGCTACCATGT
GTGGCTGGTGCGGCTGCCTCGAGTGCATCCATAACATCCCTCCCCTCAATCTCCTCTTCCTCCACTTCTCCTCGGCTGCA
CGGACGGGAAGGGAGGGAGAAGAAGGAGCGCGAACGCTCAGCCCCATGGCCTCCATCTCGGTCCCGGACCCCGCCCCTTC
CCCGACCGAGGATGCAGAGAGCATCAGAAAAGCAGTGCAAGGTAAGTACTTACGAAGATTCAATCAAGTTTAC-TCCATT
G-------------------------------------------------------------------------------
-------------------------------------------------------------------------ATTGATG
TTGTTGTTTTT-GCTCTACCGCAAGAAGAACCTGTGCTGAGATCGTG--AGAAATGGGCAGGGTGGGGGACGGACGAGAA
CGCGCTGATCGAGATCCTGGGCCACCGGACGGCGGCGCAGCGCGCGGAGATCGCCGTCGCCTACGAGGGCCTCTACGACA
AGCCCCTCCTCCGCACGCTCCAGGACGAGCTCTCCAGCCACTTCAAGGTAACATACACCTTCGCCTCCTCCATGGCCGGC
GGGCTCCTAGGCTTCTTCCTTCGTCCCCGGCCGGACACCGTCCGAAATCTAATCTCCATGCCTGCGCGTTGGTCTGGTCC
GGTGGTCTCAGGGCGCGATGACGCTGTGGGCGATGGACCCGGCGGCGCGGGACGCCAAGCTGGCCTACAAGGCCCTCAGG
AAGAAGGGCGGCGACCGGCACGCCTGGGTGCTCATCGAGGTCGCCTGCGCGTCGTCGCCGGACCACCTCGTCGCCGTCAG
GAAGGCCTACTGCTCCGCCTACGACTCGTCGCTCGAGGAGGACGTCGCCGCCTGCCCGCTCTACAAGGACCCCCTCAAGC
AGGCAAGGCCGTGCCGATCCTGGCATTCTCCTTC--TTTCGTCGCCGCCGTGGGTCCATTTCTTGCTCTTGCCGTTGCCG
GTCAGTTGAACTGAGCGCTCGTGTGCGTGTGCGTGTGCAGTTCTTGGTGCGCCTGGTGAGCTCGTACCGCCACGGCGGCG
AGCACGTCGACGGCGAGCTGGCGAGGGCCGAGGCGGCCGAGCTGCACGGCGCGGTGGCGGCCAAGAAGCAGCCGCTGCAC
GGGGACGTGGTCCGCATCGTCAGCTCCAGGAGCAAGCCGCAGCTCAAGGCGACGTTCCAGCACTACAAGCGAGAGCACGG
CAAGGCCATCGACGAGGTCTACTTCAT-------CATCATTTTTCTACGGTTAAAAAAAC-CTGAGCACACAAAATGAAC
TA-----TATCTATTTTGATGCGC--------CACAGGTTCTCGAGGGCAATCGCAACGACAAGCTGTCGGCGATGCTGA
AAACTGCGGTCTGGTGCCTGACATCGCCGGAGAAGCACTTCGCAGAGGTAATACTCAAAAG----CTCAACCTTTTCCAG
GCTGCTTCAGTTCCGATGCTCTTCATGGCTCTGCCTTTTCCAGGTGATCCGGAGCTCGATCATCGGGCTCGGCACCGACG
AGGAATCCCTGACCAGAGCGATTGTCTCGCGCGCCGAGGTCGACTTGAAGAAAGTGAAGGAGGAATACAAGGTGAGGTAC
AAGACGACGGTGACCAAGGATGTCGTCGGAGACACCTCCGGGTACTACCAGGGCATCCTGCTCACCCTCATCGGGGCCGA
GTAGCCATTGGCAGGATCATCCAAGCTCAGAGGATGATGTTCAATGCCATATTGTTTGGTACTTAGACCGTTCAGAGGAT
GATGTTCAATGGCATGGTACTTAGACCGTTCGATCGAACAGAGTGGCATTGTCGTGTGT------ACAATCTAGAGAGTG
AAGTG-TTGGTGTTGTGAAATAAGACCCCTAATAGTTCATTTATTGGTGTATTCAGCACTGGTTTGAGACAATGGTACTA
CTTCCATCACGATTTGATTTATCCGAAAGATTACACGGTGGCATGGTATCATAAACTCATTTTATGCAC-ATAGTTGCGG
CGATTCGACTCAAGT---AACACAGAACAAACGGTAGAACGATAGAACCAAACACACATCCTATTTCATCAACAGGCGGG
TGCAGTCTCACTTCTTCCTTGCAAGAGCAGCTGCGATCCCACCGACGATAAGTCCTACTGCAGTTGTGGCGATTCCTATG
CCAATCACACCATCTGCACAGAACAGGGTTATCAAGCAATAAGTGCACACGTTTTTCAAAATCAAGTAATTTATGAACAG
GGTTATCAGTATCTATTTTTACAGTTGCTTGATTTTGAAAACTCAGCATAAATTACTCCTAGCTTGCTGTTGTCACTTCA
ACAGATAAAATTATCGCATA------------------------------------------------------------
------------------GTTTTCTACTG-------------------------------------TGAATCGCAGAAAA
GTATGGTCGATTAAACTTATCTAAACTTATCTTACCTTTAGCAATTTTATCCTCTATTGCCTTCTTCAGAGATGATGCCT
GCCTCCAATCTGGTTGAATCTACAAAAAAGGGGACAAGATCAATTAAAAGAGGGAATTTATAAAGGCGGCAATATCCTTA
AACGGTTGAAAAACATATGCACTTATATTCAACTAGTATGGAATATAAAGATGATGGTCCCAGATTACCCCTTAAACAGT
TGAAAAACATACGCACTTATATTACCCCATAAACTTTGTTTTGCATATTTTTCTCTGAATTTTAATTGTATCCCACGTAT
AAAGTGTATA
>chr1D_1
GAGATTTGTTTGAAGCTCTCCTTTAGAAGGAAACCTTGCCGGTTAAGCAATGCCCATGTGTTTCCCAGATTCAGCTTCCA
GCATGAGAATGTCTACTTTTGTTTC--TGATTATTATTTTTATCATTGTTACTGCTAAACTCCTTTGTTGTTGCACATGC
T-------CATCTTCCCAAATAGTGGTGGGTGAGTGGGAGGAACAGCTAGTTTGAAACTGCAGAACTGAATAGATAGAGG
AGAGGAGAAATAAATTCATCAAGGCGCCTGTAGCTCAGTGGATAGAGCGTCCGTTTCCTAAGCGGAAAGTCGTAGGTTCG
ACCCCTACCTGGCGCGTTTTTATTTTCTGTATA----------TTTCTTTTGTGCTTAGTTGGTGCACTATTTTTTAAGT
ATCTTTTTTTATTTCACA----------------AGAGGAGAAGAGAGGGTATGAACAAGTACTTCTCTTTTTAGTCCGC
ATATAAGTTTTGGTCAAAGTCAAGCTTTGTAGAGTTTCACTAACTTTATATTAAAAAATATAAACATTCACAATATGAAA
TCAATATTATCAGATGCACCATGATACATTTTTTCATCCTATATAGTTTTAGTATTGTAGATGTTCATATTTTTTAATGT
AAATTTAGTCAAAATTTGTGTAGTTTGACTTTGATCAAATCTTATATGCGGAGTCAAAAGAAATGGAGGGAGTATGAAAC
ATGTAAGAA-----GTGTGTAAATGATACTCCTACTGATTTTTTT-------------------------TTAACTCTC-
--------------------------------AGGATCCAATAAGAAGATGGTGAGGGGAAGTCTGAAAATACA-CAAGT
TCTAAATACGATACTTCCTCCGTAAAGAAATATAAGAGCATTTAGATCACTAAGTACAGTGCGGCATGAGCAAGTCTGAA
AAATAGTTGAGGCAAGCATTAACTTAAGAATTATTACAGCGTGTGTTATAAGACGGAAGAAGGAATAATTCAGTACTAGT
ATTATTACCCACCTTTTTCCAGCAAACAAATCTAATTACCTCTTCAATGCTGATTAAATAGGAGCAATGAACATACCCAA
AATGCCCCTCGCATGACCTGTACTACGCAACATCAGCCAGGCTACTACCTA------ATTACAAGCTGGATAACCGTGGC
ACCATTAAAACTCATCACTGAGAACCTAAAATGAGCCAAGAAAAACACAATCAAAAGATG--CACGCGAAACACACGAGG
AAATAACTAGGCGAAAAGCCCATTGCCGGCGAAGCTTTCAACCCTGGTGGTGCGG---------TGTGCGCCTGCCATGT
GTGGCTGGTGCTGCTGCCTCGAGTGCATCCATAACATCCCTCCCCTCAATCTCCTCTTCCTCCACTTCTCCTCGGCTCCA
CGAACGGGAAGCGAGGGAGAAGAAGGAGCGCGAACCCTCAGCCCCATGGCCTCCATCTCGGTCCCGAACCCTGCCCCTTC
CCCAACCGAGGACGCGGAGAGCATAAGAAAAGCAGTGCAAGGTACAAT--------GATTCAATCGAGTTTACCTCGTTT
TTGTAGCTCTCCTGGTCGATTCTTTTGCGAGATGGCTCG------AGTCTGTTTTGTTGTTGTCATTTGAAAAAATTGGA
GGGCAGGGAGATTGGGAGTTTGGGACAATGATTGTTCTTGGTGGCAAGTGATTGCCAGTAGGAGTCCATTGATATTGATG
TTGTTGTTTTTCGCTCCGACGCGAGAAGAATCCGTACTGAAATC--G--AGAAATGGGCAGGGTGGGGGACGGACGAGAA
CGCGCTGATCGAGATCCTCGGCCACCGGACGGCGGCGCAGCGCGCGGAGATCGCCGTGGCCTACGAGGGCCTCTACGACA
AGCCCCTCCTCCGCACGCTCCAGGACGAGCTCTCCAGCCACTTCAAGGTAATACACACCTTCACCTCC---ATGGCGACC
TCCATGT--GCTTCGTCGTCC---------CCAGACA----CCAA-----AATCTCCATGTGCT----------------
-------TCAGGGCGCGATGACGCTGTGGGCGATGGACCCGGCGGCGCGGGACGCCAAGCTGGCGTACAAGGCCCTCAGG
AAGAAGGGCGGGGACCGGCACGCCTGGGTGCTCATCGAGGTCGCCTGCGCGTCGTCGCCGGACCACCTCGTCGCCGTCAG
GAAGGCCTACTGCTCCGCCTACGACTCGTCGCTCGAGGAGGACGTCGCCGCCTGCCCGCTCTACAAGGACCCCCTCAAGC
AGGCAAGGCCGTGCGGATCCTGGCATTCTCCTCCCTTTTTGTCGCCGCCGTGGGTTGATTTCTTGCTCTTGCCGTTGCCG
GTCAGTTGAGCTGAGCGTTCGTGTA----TGCGTGTGCAGTTCTTGGTGCGCTTGGTGAGCTCGTACCGCTACGGCGGCG
AGCACGTCGACGGCGAGCTGGCGAGGGCGGAGGCGGCCGAGCTGCACGGCGCGGTGGCGGCCAAGAAGCAGCCGCTGCAC
GGCGACGTGGTCTGCATCGTCAGCTCCAGGAGCAAGCCGCAGCTCAAGGCGACGTTCCAGCACTACAAGCAGGAGCACGG
CAAGGCCATCGACGAGGTCTACTTTCTGCGGCGCCATTATTTTTCTACAGTTAAAAAAGAACTGAACACACAAAAATGA-
ACTACAGTACCTATTTTTATGCGCCGCAAATTCACAGGTTCTCGAGGGCAATCGCAACGACAAGCTCTCCGCGATGCTGA
AAACCGCGGTCTGGTGCCTGACATCGCCCGAGAAGCATTTCGCAGAGGTAATACTCAAAAGT----TCAACCTTTTCCAG
GCTGCTTCTGTTCTGATGTTCTTCATGGCTCTGCCTTCTCCAGGTGATCCGGAGCTCGATCATCGGGCTCGGCACCGACG
AGGAGTCCCTGACCAGAGCGATCGTCTCGCGCGCCGAGGTCGACATGAAGAAAGTCAAGGAGGAATACAAGGTGAGGTAC
AAGACGACGGTGACCAAGGACGTCGTCGGCGACACTTCCGGGTACTACCAGGGCATCCTGCTCACCCTCATCGGGGCCGA
GTAGCCATTGCTAGGATCATCCAAGCTCGGAGGATGCAGTTCAATGGCGTATTGTT------------------------
--------------TGCTACTTAGACCGTTCGATCCAACAGAGTGACATTGTCGTGTGTACAAGTACAATCTAGAGAGTG
AAGTG-TTGATGTTGTGAAATAAGACCCTTGGCAGTTCATTTATTGGTGTATTCAGCACTAGCTTGAGACAATGG---TA
CTTCCATCACGATTTGACTTATCCGAAGA--TACACGGTGCCATGGTATCATAAACTCATTTTATGCACAATAGTTGCGG
CGATTCGACTCTAAGTA--ACACAGAACGAACGGTA--------GAACCAAACACACATCCTATTTCATCAACAGGCGGG
TGCAGTCTCACTTCTTCCTTGCAAGAGCAGCTGCGATCCCACCGACGATAAGTCCTACTGCAGTTGTGGCGATTCCTATG
CCAATCACACCATCTGCACGGAACAGGGCTATCAGTATCTGTAGCCAGCATACA--------------------------
------------------------TTGCTTGATTTTGAAAACTCAGCATAAATTACTCATAGCGCACTGTTGTCACTTCA
ACAGATAAAATTATCACATACTCCCTCCGTCCCATAATATAAGAGTGTTTTTTACGCTACAACGCTCAACGCTCTTATAT
TATGGGACGGAGGGAGTAGTTTTCTACTGAGGATTGAGGAACATATAAAAAAGATCAAACTGCCAATGGATCGTAGAAAA
GTATGGTTGATTAAT--------------TCTTACCTTTAGCAATTTTATCCTCTATTGCCTTCTTCAGAGATGATGCCT
GCCTCCAATCTGGTTGAATCTACAAGAAAGGGGTCAAGATAAATTAAAAGGGGGAATTTA-AAAGGCGGCAATATCCTTA
AACGGTTGAAAAACATATGCACTTGTATTCAACTAGTATGGAATATAAAGATGATGGTCCCAGATTACCCCTTAAACAGT
TGAAAAACATATGCACTTATATTACCCCATAAAGTTTGTTTTGCATATTTTTGTCTGAATTTTAATTGTATCCCAAGTTT
AAAGTGTATA
>chr1B_9
--------TTTGGAGCTCTCTTTTAGAAGGAAACCTTACCGGTTAAGCAATGC-CATGTGTTTCCAAGACTTTGCCTCCA
GCATGAGAATGTCTGATTTTGTTTGTATGATTATTATTTTTATCATTGTTACTGCTAAACCCCTTTGTTGTTGCACATGC
TGAGATATCATCTTCCCAGATAGTGGAGGGCGAGTTGGAGCAACAGTTAGTTTGAAACTAAAGATGGGAATAGATAGTGT
AGAGGAGAAATATGTACATCAAGGCGCCTGTAGCTCAGTGGATAGAGCGTCCGTTTCCTAAGCGGAAAGTCGTAGGTTCG
ACCCCTACCTGGCGCGGTTTGCCTCATAGTATTTGTTG----TTCTCTTTTGTGCTTAGCTGGTGCACTGTTTTTGAAG-
GA--TTTTTTTTTTCTCA----------------AGAGGAGAAGATCTGAAGA---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AGCATGAAAC
ATGTAAAAAAGGGTGTCACGGTGATAACACTCTCCGCCATCTTCTCCAAGGGAGGGAGTACTCATTTTCCTTAACTCCC-
--------------------------------AAGTTTCAACAAGAAAATGGTGAGGAGAAGTTTGAAAGTGCCCCAAGA
TCTAAATAAGATATTGTACTACA---------------------------TAAGTACAGTG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ACTCATGACTAAGAACCTAAAATGAGCCAAGAAAAACGCAATCAAAAGAGG--CACGCGAAACACACGAGG
AAATAATTAGGCAAAAAGCTCGTTGCCGGCGAAGCTTTCAACCCTGGTGGTGTGG---------TGTGTGGCTGCCATGT
GTGGCTGGTGCTGCTGCCTCGAGTGCATCCATAACATCCCTCCCCTCAATCTCCTCTTCCTCCACTTCTCCTCGGCTCCA
CGGACGGGAAGGGACGGAGAAG---GAGCACGAACCCTCAGCCCCATGGCCTCCATCTCGGTCCCGGACCCTGCCTCTTC
CCCAACCGAGGATGCAGAGAACATAAGGAAAGCAGTACAAGGTACAAC--------AATTCAATCAAGTTTAT-TCGTTT
TTGTAGCTCTCCTGGTCAATTCCTTTGTGAGGTGGCTGCTGTTCAAGTCTGTTTTGTTGTTGTCATTTAAAAAAAATGGA
GGGTAGA--------GAGATTGGGACAATGATTGTTCTTGGTGACAAGTGATTGCCAGTAGGAGTCCATTGATG-TGATG
TTGTTGTTTTT-GCTCCAACGCGAGAAGAATCTGTACTGAAATC--GTAAGAAATGGGCAGGGTGGGGGACGGACGAGAA
CGCGCTGATCGAGATCCTGGGCCACCGGACGGCGGCGCAGCGCGCGGAGATCGCCGTGGCCTACGAGGGCCTCTACGACA
AGCCCCTCCTCCGCACGCTCCAAGACGAGCTCTCCAGCCACTTCAAGGTAATATACACCTTCACCTCC---ATGGTTGGC
GACCTCCTAGCTTCGTTGTCC---------CCGGACACCGTCCAA-----AATCTCCATGTCTGCGCGTTGATCTGGTCT
GGTGG--TCAGGGCGCGATGACGCTGTGGACGATGGACCCGGCGGCGCGGGACGCCAAGCTGGCCTACAAGGCGCTCAGG
AAGAAGGGCGGCGACCGGCACGCCTGGGTGCTCATCGAGGTCGCCTGCGCGTCGTCGCCGGACCACCTCGTCGCCGTCAG
GAAGGCCTACTGCTCCGCCTATGACTCGTCGCTCGAGGAGGACGTCGCCGCCTGCCCGCTCTACAAGGAGCCCCTCAAGC
AGGCAAGGCCGTGCCGATCTTGGCATTCTCCTTCTTTTTTGTCGCCGCCGTGGGTTAATTTCTTGCTCTTGCCGGTC---
--------AGTTGAGCGTTCGTGTA----TGGCTGTGCAGTTCTTGGTGCGCCTGGTGAGCTCGTACCGCGACGGTGGCG
ACCACGTCGACGGCGAGCTGGCGAGGGCGGAGGCGGCCGAGCTGCACGGCGCGGTGGCGGCCAAGAAGCAGCCGCTGCAC
GGGGACGTGGTCCGCATCGTCAGCTCCAGGAGCAAGCCGCAGCTCAAGGCGACGTTCCAGCACTACAAGCGAGAGCACGG
CAAGGCCATCGACGAGGTCTACTTTCTACGGCGCCATTATTTTTCTACAGTTTAAAAAAC-CCGAACACACGAAATAAAC
ACTATAGTATCTGTTTTTATGCGCCGCAAATTCGCAGGTTCTCGAGGGGAATCGCAACGACAAGCTCTCGGCGATGCTGA
AAACTGCGGTCTGGTGCCTGACATCGCCGGAGAAGCACTTCGCAGAGGTGACACTCACAAGTGGACTCCGCCTTTTCCAG
GGTGCTTCTGTTCTGACGTTCTCCATGGCTCTGCCTTTTCCAGGTGATCCGGAGCTCAATCATCGGGCTCGGCACCGACG
AGGAATCCCTGACCAGAGCGATCGTCTCGCGCGCCGAGGTCGACTTGAAGAAAGTCAAGGAGGAATACAAGGTGAGGTAC
AAGACGACGGTGACCAAGGATGTCGTCGGCGACACTTCCGGCTACTACCAGGGCATCCTGCTCACCCTCATCGGGGCCGA
GTAGCCATTGCCAGGATCATCCAAGCTCGGAGGATGCAGTTAA---------TGTT------------------------
--------------TGCTACTTAGACCGTTCGATCGATCAGAGTGGCAATGTCTTGT------GTACAATCTAGAGAGTG
AAGTACTTGGTGTTTTGAAATAAGACCCGTGACAGTTCATTTATTGGTGTATACAGCACTAGTTTGAGACAACGG---TA
CTTCCATAACGATTTGATTTATCCGAAGA--TGCACGGTGCCATGGTATCATAAACTCATTTTATGCACAATAGTTGCGG
CGATTCGACTCTAAGTAAAACACAGAACGGACGGTAGAACGGTAGAACCAAACACACATCCTATTTCGTCAACAGGCGGG
TGCAATCTCACTTCTTCCTTGCAAGAGCAGCTGCGATCCCACCAACGATAAGTCCTACCGCAGTTGTGGCGATTCCTATG
CCGATCACACCATCTGCACGGAACAGTGCTATCAGTATCCGTAGCCAGCATACA--------------------------
------------------------TTGCTTGATTTTGAAAACTCAGCATAAATTACTCATAGCGCACTGTTGTCACTTCA
TCAGATAAAATTATCACA--------------------------------------------------------------
----------------TAGTTTTCTACTGAGAATTGAGGAACATGTAAAAAAGATCAAACTGCCAATGAATCGTAGAAAA
GTATGGTCGATTATT----------CTTATCTTACCTTTAGCAATTTTATCCTCTATTGCCTTCTTCAGAGATGATGCCT
GCCTCCAATCTGGTTGAATCTACAAGAAAGGGGACAAGATAAATTAAAAGGGGGAATTTAT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>SNPs
------------------------S-------------------------------------S----------S------
--S------------S----------------------------------S-------------S---------------
--------S---------------------------------------S-------S-----------------S-----
-------------------S------------------------------------------------------------
------------------SSS--S--S-S-S---S---SSSS-------------------------------------S
-------------SS-SSSSSSSSSSSSSSSSSS---S----S-S------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------SSSS-----------S----------S-----S----------------------------S-SSSS-SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S-----------------S-----------S---------
---S-----------SS-------------------------------------------S-S-----------------
------S----------S--------------------S------S------S-----S-S----S------S--SS---
--------S----S---------------------S-------S-------------S----------------------
-----------------------S----------------------SS-SSSSSSSS-----------------S-----
------------------------------------------------------------SS------------------
------------------------------------------------------SSSSSSSSSS---------S------
-----------S-----------------------------------------------------------------S--
-----------------------------------S-----------------------------------S--------
---S--------------------S-------------------SSSSSSSSSSSS--------------------SS--
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S-S---S-------S----S----S---SS----------------------------------
---------------------------------------------------------S----------------------
---------------------------------------------------S----------S-----SSS-----S---
-SS-------SS-SS--SSSSSSSSSSSSS-------------S-SSSSS----------S----------S-------S
-----SS-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S---------------SS-----------------------
---------S-------S------SSSSS-----------------------------------------S---------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
------------------------SS-----------S----------S----------------S----------S---
SS---------------S------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------S----S----S-------------------------------------------------------------
----------------------S--------------------------------S------------------------
-----------------------------S-----S--------------------------------------------
----------S-----------------S-------SS--------S-S-------SSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSS--S---------------------------------------------------------------
----------------------------S-S-S---------------------------S--------------SSS--
---------------------------SSSS---------S---------------------------------------
-----------S-SS-------------S------------S--------------------------------------
--------------------------------------------------------------------------------
-------------------S--------S-----SSSSS-SSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS----------------------------------S----SSS--------------
---------------S----------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------SSSSSSSSSSS-------------------------------------------------------
-------------------------S--------------S---------S-----------------------------
------------------------S-------------------------------------------------------
-----------S---------------------S------------------S----------------------S--S-
----------
>forward_209
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------GTGAGTGGGAGGAACAGCTG-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_1972
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CATACACCTTCGCCTCCTCC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_1174
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AGCCAGGCTACTTACCCCAT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_2787
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GTCGGCGATGCTGA
AAACTG--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>forward_1991
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CATACACCTTCGCCTCCTCC---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
>reverse_3388
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------AGATTACACGGTGGCATGGT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------
