>input_sequence_47639
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---------AAAGTGCGGAAAGGTG----------------------------ACAAACATATGGAAGAACTTTTCTTGT
TCAGCTATTCATAATAAGTT-CATAAGTGTTGCGGT---------------GGAGTATTTAGGTAGTAGCAACAGAT---
AAAAA------AGTGCCCTCACGCAGGATCGAACTACGGACCTTCAGTTTACAAGACTGACGCTCTACCACTGAGCTATA
AGGGCTATTTT-GCTTATTTTTTGTATGTACTTTATAAATTAGTTAGTTATCAACGTCATCTTCTACTGAATTGATCATT
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---------------------------------------TCATTATTTAATGTAAGAGAAGACGTATGCAGCTACAATAA
CAAAACAGCCCTTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCCGTAGTTCGATCCTGCGTGAGGGCA-
TTTT--------TTTTCCCCTCAAGTTAACAATATCTTATACTCCCTACTTTATTTTCGAACGGAGGGAGTACAAATTTC
GTACCGTAATCAAACTTTTGTCAAAAAGGTCGTGATGAACTCTGATTCCGACGAGTCGCCGGCACCAAACGATCTACACG
TACGGCACCACAGAACCAACCGATGGCACAAACCGAACGTGAACGCACGTTGCTGGTCCAGGAGCGATGGCCGAC-----
-CCGACGCCGACGCGTGCGGGCACCAGAACCAGCGGCATGGCCGCGAGGAGCGGAGCAATGTTCGACACAGCGGTCGCCT
CGACGCCGGCCTACGCCAGGGAGATGCTGGCCGGCGGCGTCGCGGGCGTGGCGGCCAAGACGGCCGTGGCCTCGCTCGGC
CGCGTGAAGCTCCTCTGCCGAAC--------GGGCGGCGAACCCGGGGGCGTCGGCGCCGTCCGGACGCTCGTCGGGATC
TACCGCCGGGAAGGAGTCGCGGGGCTCTACCGCGGCAACGGCGCCAACGCGCTGCGCGTGTTCCCGTCCAAGGCGCTCCA
CTTCGCCGCCTACGAGCGGTACAGGGGCTGGCTCCTCGCCGCCACGGCCGCCCCGTCGTCGT---CGGTCGTGGACCTCC
TCGCAGGCTCGGCCGCCGGCGGCACCGCGCTGCTCGCGACGTACCCGCTCGAGCTCACCCGCGCGCGGCTCGCCTGCGGG
GGCGACGCCGCCCGCACGAGCGTGCACGGCGTCCTCCGGGCCGCGTACGCGGAGGGTGGCGGCGTGCGCGGGCTGTACCG
CGGCGCGTGCCCGGCGCTGGCGCGAGCGCTGCCCAGGGCGGGGATCAAGTTCGGCGCGTACGAGTGGCTCAAGCGGCGGC
TCCCCGAGGGCTGCGACGGGCGCGCGGACGCGCAGCTGGCGTGCGGGGTGGCAGCGGCGCAGCTGGCCAGCACGGCGACG
TACCCGCTGGGCGTGGTGCGGCGACGGATGCAGCTCGGACTGGCAACCGG---------------TGGCGTGCTGCAGGG
CATCCGTGCCATCGCGCGGGAGGAGGGCATGCGGCGGCTGTACGCCGGGCTGGGGATCGCGTACGTCAAGGCGGTGCCGG
CGGCGGCCATTGGGCTGGCGGCTTACGACCAGATGAAGCTTCTTTTGAA-CTGCCGGCCGGTGGCCACGGCGAGAGTGTT
CACGCACCCTAGGCTGGCCGGCGGCGAGTACGTAGTTTGCTGGTGAATACA-----------------------------
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>chr5A_1_TraesCS5A01G301600
AGTATCACCGAGAGCATGTGGCCCACTAGCAACACGCTACCAACGAGCGCCGCACAATAAAGGCCTCGTAAGAGAGCTCT
CCTATTGCAAGCAGCGTTCTG---CATACGAGGCGCCACATAGCTCACGAC----CAGGCTTGGGAGGAGCTACAAGGGG
ACATTCCTGCTGATGAGGGAACACATGAGATACTAGTGGCGGCTGAAGATTTCATCGATATTTCATCTAACGACGAGGCC
TAG-TAGGTGACACAGTTTTAAGTTTTTGCATATAGTTGTGTGTCATGG-------TATGAAGGCTTGACTTTTGTGATG
TTCAATTAGGTTTTAGTTATGTTTATCTTAGACTTAACTTTTATTTGAGCTATGTTTAATTGGGTACCTTGAATTATGAA
GTTGGAAGTGAAGTTCAATTATGAAGTATATGGCCAAAACAGGGGAATA---GCTTTTCAAGATGTGCTTTTGGGGTTAA
TGTTTTGGGCATCAATCAGAAACCACC--------CTCCCCGTACCCATGATTTTTGGGGAGTTTAGTTTTGGGGGTGTC
ATTTTCGGAATTAGTTTTTGGCTATGAGTAGAGTTGATGTGAGGTGCTCCATGTTGGATGGAAACAAGGGAGAAACTCGA
ACATTGAGCGACTTTAAGCAT-----------------------------------------------------------
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---------------------AGATAACATACCGCATGTTAGATGAGCTTAATCATGTACTCCCTCTGTAAAGAAATATA
AGAGTGTTTGATCTGATCTAAACGCTCTT---------------------------------------------------
------------------------------------------ATATTTCTTTATAGAGGGAGTATTCACCAAAGGAGAAA
CGGATATTGTCATGAGAACCCAAATCAAGCACTTGCAGTAG-----GCTTGTCTAATGCGGAAAACCATGTTAACTTTTG
TTGACCAGCAAGGCAAAGTTTACTTGCTACCCCATACCA-AAAACCAAGATAGTGTAGATGCTTGAAACAACCAATAGAT
TCTGGAAAAATTAATCATGATAATTGTGCATGTCCCCAAGATTTGTATCCGAGGTTTATAA----ATCTTGCCAAGTTTA
TGTTTGATCAAAGTGCGGAAAGGTG----------------------------ACAAACATATGGAAGAACTTTTCTTGT
TCAGCTATTCATAATAAGTT-CATAAGTGTTGCGGT---------------GGAGTATTTAGGTAGTAGCAACAGAT---
AAAAA------AGTGCCCTCACGCAGGATCGAACTACGGACCTTCAGTTTACAAGACTGACGCTCTACCACTGAGCTATA
AGGGCTATTTT-GCTTATTTTTTGTATGTACTTTATAAATTAGTTAGTTATCAACGTCATCTTCTACTGAATTGATCATT
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---------------------------------------TCATTATTTAATGTAAGAGAAGACGTATGCAGCTACAATAA
CAAAACAGCCCTTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCCGTAGTTCGATCCTGCGTGAGGGCA-
TTTT--------TTTTCCCCTCAAGTTAACAATATCTTATACTCCCTACTTTATTTTCGAACGGAGGGAGTACAAATTTC
GTACCGTAATCAAACTTTTGTCAAAAAGGTCGTGATGAACTCTGATTCCGACGAGTCGCCGGCACCAAACGATCTACACG
TACGGCACCACAGAACCAACCGATGGCACAAACCGAACGTGAACGCACGTTGCTGGTCCAGGAGCGATGGCCGAC-----
-CCGACGCCGACGCGTGCGGGCACCAGAACCAGCGGCATGGCCGCGAGGAGCGGAGCAATGTTCGACACAGCGGTCGCCT
CGACGCCGGCCTACGCCAGGGAGATGCTGGCCGGCGGCGTCGCGGGCGTGGCGGCCAAGACGGCCGTGGCCTCGCTCGGC
CGCGTGAAGCTCCTCTGCCGAAC--------GGGCGGCGAACCCGGGGGCGTCGGCGCCGTCCGGACGCTCGTCGGGATC
TACCGCCGGGAAGGAGTCGCGGGGCTCTACCGCGGCAACGGCGCCAACGCGCTGCGCGTGTTCCCGTCCAAGGCGCTCCA
CTTCGCCGCCTACGAGCGGTACAGGGGCTGGCTCCTCGCCGCCACGGCCGCCCCGTCGTCGT---CGGTCGTGGACCTCC
TCGCAGGCTCGGCCGCCGGCGGCACCGCGCTGCTCGCGACGTACCCGCTCGAGCTCACCCGCGCGCGGCTCGCCTGCGGG
GGCGACGCCGCCCGCACGAGCGTGCACGGCGTCCTCCGGGCCGCGTACGCGGAGGGTGGCGGCGTGCGCGGGCTGTACCG
CGGCGCGTGCCCGGCGCTGGCGCGAGCGCTGCCCAGGGCGGGGATCAAGTTCGGCGCGTACGAGTGGCTCAAGCGGCGGC
TCCCCGAGGGCTGCGACGGGCGCGCGGACGCGCAGCTGGCGTGCGGGGTGGCAGCGGCGCAGCTGGCCAGCACGGCGACG
TACCCGCTGGGCGTGGTGCGGCGACGGATGCAGCTCGGACTGGCAACCGG---------------TGGCGTGCTGCAGGG
CATCCGTGCCATCGCGCGGGAGGAGGGCATGCGGCGGCTGTACGCCGGGCTGGGGATCGCGTACGTCAAGGCGGTGCCGG
CGGCGGCCATTGGGCTGGCGGCTTACGACCAGATGAAGCTTCTTTTGAA-CTGCCGGCCGGTGGCCACGGCGAGAGTGTT
CACGCACCCTAGGCTGGCCGGCGGCGAGTACGTAGTTTGCTGGTGAATACAGGAGAGCTGGTGATCTCGTCACAATCGTC
GAGCGCGTAGTGGAAGTGAAATAGTAGTACGACGTAGGTAGATTCTCTTGCATGCTTTTGCTTTTTGGAAGTTAGAATTT
CTGACTACTCCGTATATACTCCCTCCCTTGCTAAATATAAGTCTTTTTTAAAAATTCTAACAAATGACCATATACATAGC
AAAATGAATGAATCTACACTCTAAAATATGTGTATATATATCCGTATATTGTTGTCCATTTAAAATATTTAAAAAGATTT
ATATTTAAGAACGAAGGGAGTATATCTGTATTTTGCAATCTCATAAATGTTTGGATAGTTCAACCACCGTCCGAGAGCAT
CTCCAACAGCCGTGCTA-------------AAAAAATCTTTTGCGGCGTGTGGATCGCCTGTTTTTGTGCA-----GTGC
GCTTGCTTCAGCGGCCGCTGCAAAGTTTAGCGCGTGCGAGCCGATCTAGCAGACGCGCT-AAACTGCAGTGCA--CGAGC
AGTCGGCGCTTGTCATAT---GTTGAGTTTTGAA---GA---TGAT--GATATTTG---------------AAACATGAA
AACAAGAACATAAA----------------CCAAACAAGTTC-ATGACATA--------------AAAGTTCAAATTCAT
-TCCACAATATCATCTAACCAATTTCAAAATCCGAACGAAGTTCATGACAA---A-G-TTCACACAAACGAATGGCACAT
CTCAACAATCATGCCTCATCCTCGTCTTCGTCCTCCTCTTTCTCCGATTCATCTTCCTC-ATTCAAAGACGATTCTTCCT
TCTCCTCTTCATTGTCGCACGCTGC-ATCATCATGTGGAGCTCGGAAGGTGTTGGCAAGATCTTCAACG---------GA
AGATGTGTGATGAGGCACACCGGAA-GACATTCCGCCCATGCCGCCCGGAAGTGCTCCCATGCCTCCCATGAGAGACACA
AAACTCATGCCTCCCATGATAGC---------TCCGAAGCCACCCATGCCTCCCATGGTCTTCATGGTAGCTCCGAAGCC
ACCCATGCCACCCATGCCGCCCATGGTAGCTCTGAA
>chr5D_1
AGTATTACCGAGAGCGTGTGGCCCATGAGCAACACGCTACGAGCGAGCGCCGCGCAATAAAGGCCTTGTAAGAGAGCTCT
CCTACTGCAAGCACCGTGTCGCGACGTACGAGGCACCACATAGCCCACGAC----TAGGCTTGGGAGGAGCTACAAGAGG
ACATTGCTGCCGACAAGGAAACACATAAGATACTAGTGCCGGCTGAAGATTTCATCGATATTTCATCTAACGGCGAGGCC
TAGTTAGGTGACACAGTTTTAAGTTTTTGCATATAGTTGTTTGCCATGG-------TATGAAGGCTTGACTTTTGTGATG
TTCAAGTAGGTTTTAGTTATGTTTATCTTAGACTT-----TTATTTGAGCTATGTTTAATTACATACCTTGAATTATTAA
GTTGGAAGTGAAGTTCAATGATGAAGTATATGGCCAAAACAGGGGAATAATAGCTTTTCAA-ATGTGCTTTCGGGGGTAA
TGTTTTGAGCATGGATTAGAAACCACC--------CTCCCCGTACCCATTATTTTTGCGGAATTCAGTTTTGGGGTGGCA
--TTTTGGAATTCGTTTTTGGCTGTGAGTAGAGTTGATCCGAGGTGCTCCATATTGGATGGAAACAAGGGAGAAACTCGA
ATCTTGAGCTGACTTTACTATAGATTACGTACCGCAGCAGACTAAGGCATAGCCTAGTGGTGGGGAGGGGTTGATACCTT
CCCACACACCCAGGTTCAAGGCATGATACTTGCAATTTGGGTTTGTTGCACCAATTATATTGTAGGGGGTTCCCTTACAG
TCTTTCTATCAAAAAAAAAACAGATTACGTACCGCATGCTAGATGAGATTAATCATCAT---------------------
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-------------------------------------------------------------GTATTCACCAAAGGAAAAA
CGAATATTCTTAGGAAAAACCAAATCAAGCACTTGCAGAAGGCAATGCTTGTCTAATGCGGAAGAC---GTTAACTTTTG
TTGACCAGTAAGGCC-------------------------AAAACCAAGATAGTGTAGATGCTTTAAACAACCAATAGAT
TCTGGGAAAATTAATCACGATAATTGTACAAGTCTCGAAGATCTGTGCT-GAGGTTTATATATACATCTTGCCAAGTTTA
TGTTTGATCAAAGTGCGGAAAGGTGCAGCTAAAAAAAAAGATGCGGAAAGGTGACAAACATATGGAAGAAATTTTCTTGT
TCAGCTATTCATAATCAGTT-AATGTTATGGT---TTTAGTTCGAACGGAGGGAATACGTAGGAAGTAGCAACAGATAAG
AAAAA------ACTGCCCTCACGCAGGATCGAACTACGGACCTTCAGTTTACAAGACTGACGCTCTACCACTGAGCTATA
AGGGCTTG------------------------------------------------------------------------
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-----------TTTGTTTTGTGATTGTATACATTTTATTAACTAATGACTAAATTAATACAAAATGGCGTTGA-------
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---------------CAATTGATTATTTTAACCGATGTATACTAAAATGAAT----------------------------
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CAAAACAGCCCTTATAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCCGTAGTTCGATCCTGCGTGAGGGCAC
TTTTTCTTCCGATCTTCCTCTCAAGTTCACAATATCTTATACCTCCTTTATTTTTTTGCAACC---------CAAATTTC
GTACCGTAATCAAACTCTTTCACAAAAGATCGTGATGAACTCTGATTCCGACGAGTCGCCGGGATCAAACGATCTACACG
TACGGCACCACAGAACCAACCGATGGCGCAAACCGAACATCAACGTACGTTGCTGGTCCAGGAGCGATGGCCGAC-----
-CCGACGCCGACGCGTGCGGGCACCAGAACCAGCGGCATGGCCGCGAGGAGCGGTGTAATGTTCGACACCGCGGTCGCCT
CGACGCCGGCCTCCGCCAGGGAGATGCTGGCCGGCGGCGTCGCGGGCGTGCTGGCCAAGACGGCCGTGGCCTCGCTCGGC
CGCGTGAAGCTCCTCCGCCGAAC--------GGGCGGCGAACCCGGGGGCGTCGGCGCCGTCCGGACGCTCGTCGGGATC
TACCGCCGGGAAGGTGTCGCGGGGCTCTACCGCGGCAACGGCGCCAACGCGCTGCGCGTGTTCCCGTCCAAGGCGCTGCA
CTTCGCCGCCTACGAGCGGTACAGGGGCTGGCTCCTCGCCGCCACGGCCGCCCCGTCGTCGT---CGGCCGTGGACCTCC
TCGCCGGCTCGGCCGCCGGCGGCACCGCGCTGCTCGCGACGTACCCGCTCGACCTCGCCCGCGCGCGGCTCGCCTC---G
GGCGACGGCGCGTGCACGAGCGTGCACGGCGTCCTCCGGGCCGCGTACGCGGAGGGTGGCGGCGTGCGCGGGCTGTACCG
CGGCGCGTGCCCGGCGCTGGCGCGCGCGCTGCCCAGGGCAGGGATCAAGTTCGGCGCGTACGAGTGGCTCAAGCGGCGGC
TCCCCGAGGGGTACGACGGGCGCGCGGACGCGCAGCTGGCGTGCGGGGTGGCAGCGGCGCAGCTGGCCAGCACGGCGACG
TACCCGCTGGGCGTGGTGCGGCGACGGATGCAGCTCGGACTGGCAACCGG---------------TGGCGTGCTGCAGGG
CATCCGTGCCATCGCGCGGGAGGAGGGCGTGCGGCGGCTGTACGCCGGGCTGGGGATCGCGTACGTCAAGGCGGTGCCGG
CGGCGGCCATTGGGCTGGTGGCTTACGACCAGATGAAGCTTCTCTAGAAGCTGCCAGCCGGCGGCTACGGCGAGAGTGTC
CACGCACCCTAGGCTGGCCGGCGGCGAGTGCGTAGTTTGCTGGTGAATACAGGAGAGCTGGTGATCTCGTCACAATCGTC
GAGCGCGTAGTGAAAGTGAAATAGTAGTACGACGTAGGTAGATTCTCTTGCATGCTTGTGCTTTTTGGAAGTCAGAATTT
CTGACTACTCCGTATATA--------------------------------------------------------------
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--------------------TATATCTGCATTTTGCAATCTCATAAATGTTTGGATAGTACAACCACCATCTGAGAGCAT
CTCCAACAGCTGTGCTACGCGCGGCGCGCTAAAAAACCTTTTGCAGCGCGCGGATTGCCTGTTTTTGCGCGGCGCGATGC
GCTTGCTCCAGCGGCCGCTGCAAAGTTTAGCGCGCGCGAGCCGGTCCAGCAGACGCGCT-AAACTGCAGCGCGCGCGAGC
AGCCGGCGCTTGTCATAT---GTTGAGTTTTGGA---GT---TGAT--GATGTTTG---------------AAACATGAA
AACAAAAACATGAAAACAAAGACATAAATTCAAACAAAGTTC-ATGACATA--------------AAAGTTCAAATTCAT
GCCCACAACATCATCCAACCAAGTTCAAAATCCGAACGAAGTTCATGAC-A---A-G-TTCACACAAACGAATGGCACAT
CTCAACAATCATGACTCATCCTCGTCTCCGTCCTCCTCTTCCTCCGATTCATCTTTCTC-ATCCGAAGACGATTCTTCCT
CCTCCTCTTCATTGTCGCACGCCGC-ATCATCATGTGGAGCTCGGAAGGTGTTGGCAAGATCTTTAACG---------GA
AGGTGTGTGATGAGGCACACCGGAA-GACATTCCGCCCATGCCGCCCGGAGGTGCTCCCATGCCTCCCATGAGAGACGCA
AAACTCATGCCTCTCATGGTAGC---------TCCGAAGCCACCCATGCCTCCCATGGTCTCCATGGTAGCTCCAAAGCC
ACCCATGCCACCCATGCCGCCCATGGTAGCTC----
>chr5B_3
--TATCACCGAGAGCGTGTGGCCCATGAGCAACACGCTACCAGCGAGCGCCACGCAATAAAGGTCTCGTAAAAGAGCTCA
CCTACTGCAAGCACCGAGCCG---CGTACGAGGCACCAGATAGCCCACGACCATGCATGCTTGGGAGGAGCTGCAAGAGG
ACATTGTTGTCGACGAGGCAACACATGAGATACTAGTGTCCGCTGAAGATTTCATCGATATTTCATCTGACGATGAGGCC
TAGT-AGGTGAAACAGTTTTAAGTTTTTGCATATAGTTGTGTGCCATGGTATGAACTATGAAGGCTTGACTTTTGTGATG
TTCAATTAGGTTTTAGTTATGTTTATCTTAGTCTTAACTTTTATTTGAGCTCTGTTAAATTATGTACCTTAACTTATGAA
GTTGGAAGTCAAGTTTAATTATGAAGTGTATGGACAAAATAGGGGAATA---GCTTTTCAAGATGTGCTTTTGGGGTTAA
TGTTTTGGGCATCAATTAGAAACCACCCTCCCCGACTCCCCGTAACCATGATTTTTGGGGAGTTCAGTTTTGGGGTGGCA
--TTTTGGAATTTG-TTTTGGCTATGAGTAGAGTTGATCTGAGGTGCTCCATATTGGATGGAAACAAGGGAGAAACTCGA
ATCTTGAGCCA---------------------------------------------------------------------
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--------------------------------CGCATGTTAGATGAGCTTAATCATGTACTCCCTCCGTTCCTAAATATT
TGTCTTTCTAGAGATTTCAACACAAGTGACTACATACTGAGCAAAATGAGTGAATGTACACTCTAAAATATGTCTATATA
CATTCGTATGTGGTAGTTCATTCGAAATCTCTAAAAAGACAAATATTTAAAAACAGAGGGAGTATTCGCTAAAGGAGAAA
CATATATTCTCATGAATACCCAAATCAAGCACTTGCAGAAGGCAA-----------------------------------
----------------AGTTAACTTGGTACCCCATGTCCGAAAACCAAGATAGTGTAGATGATTTAAACAACCAATAGAT
TGTGGAAAAAACAATCACGATAATTGTGCAAGTCCCAAAGATCTGTAACCGAGGTTTATAC----ATTTAGTCAAGTTTA
TGTTTGATTAAAGTGCGGAAAGGTG----------------------------ACAAACATATGGAAGGACTTCTCTTGT
TCAGCTATTCATAATAAGTTTCAGAAGTGTTGTCCTTTAGTTCGAACAGAGGGAGTATTTAGGTAGTAGTAGTAACAAGG
GAAAAAAAATTACTGCCCTCACGCAGGATCGAACTACGGACCTTCAGTTTACAAGACTGACGCTCTACCACTGAGCTATA
AGGGCTGTTTTTGTTTACCTTTGGTATACGTTTTATACATTAGCAAGATATCAACGTCATTTTCTACTGAATTGATCATT
ATTTAATGTGACATAAGACGTAACAATTACTACGTACTACGGACCTTCATTTTACAAGACTGACGTTCTACCACTGAGCT
ATAAGGGCTGTTTTGATTATCTTTGGTATACATTTTATAAATTAGTAAGATATCAACGGACGCGGATTTTTGGGACATGG
TTCCACGCGAGGAGCATATCCAATCCGTATGTTTGTGCTTTGAGATCTGTATTTAATATAGCTTTATTTTCAATACATGA
CAGACATGGGCTATACGACAGTGAATACAAATGTGAATACTAAGTCTCATGGTCCCTGGCTCATCATAGCTAACAAATGC
GTGAAGTGTGTTCATTGCGTTGCAGACATGTATCAATGCGTGCACACCACCCATTTTATGGCACTTATAAATTGTGATTA
GGTGGACAGATCTCCATTTATATGTCACTCATCAATAGGCAGATGAATAAATGAAATGCTGACACAACAAGCTTTATTCA
TAATGACGGTTCCAAGACAAACAGAATGGTATACTGTAATTAGCCTTAACCGTTGATACATAGCTAATAACTGGCGCATT
GATTAAATAGACCTTTCATACGATTAGCCTTAATGTGTCGACTAATACAATACTAGTGTAGTAGATAGAGCAGATTTGCA
ATCAACCAAAGCAGTGAAATAAAAACTCATTCACTCATATCGGTGAGGTATCAATATTCTCTATAGGTCGTGTACACATA
TTTTTACTTTCCAATAAATTTTTGCCTGATTTTTTTATTTAGTGGCGCACTGACTTTTTTCATGATTCGAGTTAACTAGC
ATGAAGAATGATGTTCAACTGATTATTTTTGGGTAAGAAATTCGTACATATAAGGATTTTAGTTGTAAATCAGTAGTCTG
AAACATGTGATGAAACTAAAATACTCCAAATTAAACAATGCTGGGTGGAGAGAGCCGGTGTGATTATTGCCAGTGTGCAG
GCTTCCAATGTAGTACTTAACACTTAGCAGTTTGCACCTAATACACTATACCCACAGAAGAAAAAAATCACTATACCCAC
GTCTTCAACCTGGTGTTGCGAGAAAAGGCTGGCCATGGCATCAAGCTCCAGCTACGGCGAAAGGTTAGATGTTCATTAAT
ATTCACTACTCTGGAGAGACCTTTCCTAGGCTGGTTGAGATCCTAGTACAAAGCAGTAGCTTGCAATGTCCACCACCTGA
TTATGAACACATTTGCTTAGTTAAGCCAATGCGTCATGACCTATTATTAGTTTAGTTGGCAGCTTGGTGCAAATAGCTCT
CTCGTGCCAGGGAGCTACGTCGCACTGCCGTGTAATCAATTTTAGTCAATGCGCCCATTGTTTCAATGCGTGAGCCTGCC
ATATCAGCCATTTATTGGGGCGCAGAGGCAATACGAGAACTATACCAATTAGTGTATGTTGGCTAGAAAACGTTCTACGA
CATCAATGTATTGGAGTAGCACGAATCACGTGGAAATGAGTGGTGATGATAACGACCTCGCGTGTCTGCATGTCCACACG
CGATTTATCGGTTATCAGCATCAATTTCTACTGAATTGATCATTATTTAATATGAGAAAGAACGTAACAATTACAAAACA
-AAAACAGCCCTTGTAGCTCAGTGGTAGAGCGTCAGTCTTGTAAACTGAAGGTCCGTAGTTCGATCCTGCGTGAGGGCAC
TTTC--------TCTTCCTCTCAAT---------TCTTATACTTCCTTTATTTTTTTGCAACC---------CAAATTTC
GTACCGTAATCAAACTCTTTCTCAAAAGGTCGTGATGAACTCT----CCGACGAGTCGCCGGGACCAAACAATCTACACG
TACCGCACCACAGAACCAACCGGTGGCGCAAACCGAACGTCAACGTACGTTCCTCGTCCAGGAGCGATGGCCGACCCGAC
GCCGACGCCGACGCGTGCGGGCACCAGAACCAGCCGCATGGCCGAGAGGAGCGGAGTAATGTTCGACACCGCGCTCGCCT
CGACGCCAGCCTACGCCAGGGAGATGCTGGCCGGCGGCGTCGCGGGCGTGCTGGCCAAGACGTCTGTGGCCTCGCTCGGC
CGCGTGAAGCTCCTCCGCCGAAT--------GGGCGGCGAACCCGGGGGCGTCGGCGCCGTCCGGACGCTCGTCGGGATC
TACCGCCGGGAAGGAGTCGCGGGGCTCTACCGCGGCAACGGCACCAACGCGCTGCGCGTGTTCCCGTCCAAGGCGCTCCA
CTTCGCCGCGTACGAGCGGTACAGGGGCTGGCTCCTCGCCGGCTCGGCCGCCCCGTCGTCGT---CGGTCGTGGACCTCC
TCGCCGGCTCGGCCGCCGGCGGCACCGCGCTGCTCGCGACATACCCGCTCGACCTCGCCCGCGCGCGTCTCGCCTC---G
GGCGACGCCGCCCGCACGAGCGTGCACGGCGTCCTCCGGGCGGCGTACGCGGAGGGTGGCGGCGTGCGCGGGCTGTACCG
CGGCGCGTGCCCAGCGCTGGCGCGCGCGCTGCCCAGGGCGGGGATCAAGTTCGGCGCGTACGAGTGGCTCAAGCTGCGGC
TCCCCGAGGGGTACGACGGGCGCGCGGACGCGCAGCTGGCGTGCGGGGTGGCAGCGGCGCAGCTGGCCAGCACGGCGACG
TACCCGCTGGGCGTGGTGCGGCGACGGATGCAGCTCGGACTGGCAACCGG---------------TGGCGTGCTGCAGGG
CGTCCGTGCCACCGCGCGGGAGGAGGGCGTGCGGCGGCTGTACGCCGGGCTGGGGATCGCGTACGTCAAGGCGGTGCCGG
CGGCGGCCATCGGGCTGGTGGCTTACGACCAGATGAAGCTTCTCTTGAAGCTGGCTGCCGGCGGCCACGGCGAGAGTGTT
CACGCACCCTAGGCTGGCCGGCGACGAGTACGTAGTTTGCTGGTGAATAGAGGAGACCTGGTGATCTCGTCACAATCGTG
GAGCGCGTAGTGAAAGTGAAATAGTAGTACGACGTAGGTAGATTCTCTTGCATGCTTTTGCTTTTTGGAAGTTGAATTTC
TGCACTACTCCGTATAT---------------------------------------------------------------
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>chr5A_1687
CGCTCGGCTCCACGTCAA--------------------------------------------------------------
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-------------------GGAGATGCTCGCCGGCGGCGTCGCGGGCGTGGCGGCCAAGACGGCCGTCGCGCCGCTCGAT
CGAGTGAAGCTCCTCCGACAGGTCGGAGGTGGGGCGGCG--CCCGCCGGCACCAGCGCCTTCAGGACGCTCCTCGAGATC
AGCCGCCGCGAGGGCCTCAGGGGGCTCTACCGCGGGAACGGCACCAACGCGCTGCGCGTGTTCCCTTCCAAGGCGATCCA
CTTCATGGCGTACGAGCAGTACCGGAGCTGGCTCCTCGGCGCCGTCCCCTCGCTCGGCGGCGGGCCGGTCGTGGACCTGC
TCGCCGGCTCGGCCGCCGGCGGCACGTCGCTGATAGCCACGTACCCGCTCGATCTCGCGCGCACCAGGCTCGCCTGCCGT
GCCACCGAGGCGGGCGTCTT------CGGCGTGCTCCGGAGCGTGTACGCGGAGGGCGGCGTC---CGCGGCCTGTACCG
TGGTGCGTGGCCGTCGCTGGCGCGCGTGCTCCCGACCGCCGGGCTCCGCTTCTTCGTGTACGAGTCGCTGAAGCGCCGGC
TCCCAGAGGACTACGAGGGGCGCGTGGATGCCAAGGTGGTGTGCGGGATGGCGGCGGGTCTGGTGGGCAACACGGCGACG
TACCCGCTGAGCGTGGTGCGGCGGCAGATGCAGCTCGGCGGCACGGGCACGGGGACGGCGGTCACTGGGGCGCTGCAGGG
CGTTCGGGCCATCGCAAGGGCGCAGGGGGCGCGGCAGCTATACGCAGGGCTAGGGCTCTCGTTCCTGAAGGCGGCGCCGT
CAGCGG--------------------------------------------------------------------------
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>chr4B_2954
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------------------------------AAAAAACCTTTTGCAGCACGCAGGTCGCCTGTTTTTACGCGACGTGGTGC
GCTTGCTCCAGCGGCCCCTGCAAAGTTTAGCGCATGCAAGCCGCTCCAGCAGACGCGTT-AAATAGCAGCGCGCGCGAGC
AGCCGGCACTTGCCATAT---GTAGAGTTTTGGA---GA---TAAT--GATGTTTG---------------AAACATGAA
AACAAAGACATTAAA--------------CCCAAACAAATTC-ATGACATA--------------AAAGTTCAAATTCAT
ATCCACAACATGATCCAACCAAGTTCAAAATCCCAACGAAGTTCATGAC-A---AAG-TTCACAAAAACGAATGGCACAT
CTCAATAATCATGCATCATCCTCGTCTTCGTCCTCCTCTTCCTCCGATTCATCTTTGTC-ATCCAAAGACGATTCTTCCT
CCTCCTCTTCATTGTCGCACGCCGC-ATCATCATGTGGAGCTCAGAAGGTGTTGGCAAGATCTTCAACG---------GA
AGGTGTGTGATGAGGCACACCAGGA-GACATTCCGCCCATGCCGCCCGGAGGTGCTCCCATGCCTCCCATGAGAGACGCA
AAGCTCATGCCTCCCATGGTAGC---------TCCGAAGCCACCCATGCCTTCCATGA---------TAGCTCTGAAGCC
ACCCATGCCACTCATTTCGCCCATGGTAACTC----
>chr3D_2992
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--------------------------------------------------------------------GCA-----GTGC
GCTTGCTCCAGCAGTCGCTGCAAATTTTAGCGCGCACGAGCCGCTCCAGCAGGCGTGCTAAAACTGCAGCGCGCGCGAGC
AGCCGGCGCTTGCCATAT---GTTCAGTTTTGGA---GA---TGAT--GATGTTTG---------------AAACATGAA
AACAAAAACATG-AA--------------CCCAAACAAGTTC-ATGACATA--------------AAAGTTCAAATTCAT
GCCCACAACATCATCCAACCAAGTTCAAAATCCGAA----GTTCATGAC-A---AAG-TTCACACAAACGAATGGCACAT
CTCAACAGTCATGCCTTATCCTCGTCTTCGTCCTCCTCTTCCTCCGATTCATCTTCCTC-ATCCAAAGACAATTCTTCCT
CCTCCTCTTCATTTTGAAGCGCCGC-ATCGTCATTGGGAGCTCGGAAGGTGTTGGCAAGATCGTCAACG---------GA
AGGTGTGTGATGAGGCACACCGGAA-GGCATTCCGCCCATGCCGCCCGGAGGTGCTCCCATGCCTCCCATGAGAGACGCA
AAGCTCATGCCTCCCATGGTAGC---------TCCGAAGCCACCCATGCCTCCCATGGCCTCCACGGTAGCTCCGAAGCC
ACCCATGCCACCCATGCCGCCCATGCTAGCTCCGAA
>chr5A_2995
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------GTGC
GCTTGCTCCAGCGGCCGCTGCAAAGTTTAGCGCGCGCGAGCCGCTCCAGCAGGCGCTGC-AAACTGCAATGCGTGCGAGC
AGCCGACGCTTGCCATAT---GTTGCGTTTTGGA---GA---TGAT--GATATTTG---------------AAACATGAA
AACAAAGACAT--CA--------------CCCAAACAAGTTC-ATGACATA--------------AAAGTTCAAATTCAT
GCCCACAACATCATCCAACCAAGTTCAAAATCTGAATGAAGTTCATGAC-A---AAG-TTCACACAAACGAATGACACAT
CTCAACAATCATGCCTCATCCTCGTCTTCG--CTCCTCTTCCTCCGATTCATCTTCCTC-ATCCAAAGACGATTCTTCCT
CCTTCTCTTCATTATCGCATGCCGC-ACCATCATGTGGAGCTCGGAAGGTGTTGGCAAGATCTTCAATG---------AA
AGGTGTGTGATGAGGCACACCGGAAAGACATTCTGCCCATGCCGCCCAAAGGTGCTCCCATGCCTCCCATGAGATACGCA
AAGCTCATGCCTCCCATGGTAGC---------TCCGAAGCCACCCATGCCACTCATGCCGCCTATGGTAGCTCAGAAGCC
ACCCATGCCACCAATGCCACC---------------
>chr4B_2995
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------GTGT
GCTTGCTCCAGCGGCCGCTGCAAAGTTTAGCGCGCGCGAGTCGCTCCAGCAGATGCGCT-AAACTGCAGCGCGCGCGAGC
AGCCGGCGCTTCCCATATATTGTTGAGTTTTGGA---GA---TGATATGATATTTGAAACATTGAAAACGAAAACATGAA
AACAAAGACAT--AA--------------CCCAAACAAGTTC-ATGACATA--------------AAAGTTCAAATTCAT
GCCCACAACATCATCCAACCAAGTTCAAAATCCGAACGAAGTTCATGAC-A---AAG-TTCACACAAACGAATGGCACGT
CTCAACAATCATGCCTCATCCTCGTCTTCGTCCTCTTCTTCCTCCGATTCATTTTCCTC-ATCCGAAGACGATTCTTCCT
TCTCCTCTTCATTCTCGCACGCCGC-ATCATCATGTGGAGCTCGGAAGGTGTTGGCAAGATCTTCAACG---------GA
AGGTGTGTGATGAGGCACACCAGAA-GACATTCCGCCCATGCCGCCCGGAGGTGCTCCCATGCCTCCCATGAGAGACGCA
ATGCTCATGCCTCCCATGATAGC---------TCCGAAGCCACCCATGCCTCCCATGG---------TAGCTCCGAAGCC
ACCCAAGCCACTCATTCCGCCCATGGTAGCTC----
>chr6B_2995
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----------------------------------------------------------------------------GTGC
GCTTGGTTCAGCAGCCGCTGCAAAGTTTAGCGCTCGCGAACCACTCCAGCAGACGCGCT-AAACTACAGCACGCGCGAGC
AGCC-----TTGCCATAT---GTCGAGTTCTGGAGATGA---TGAT--GATATTTG---------------AAACATGAA
AACAAAGACAT--AA--------------CCCAAACAAGTTC-ATGGCATA--------------AAAGTTCAAATTCAT
GCGCACAACATCATCAAACCAAGTTCAAAATCCGAACGAAGTTCATGAC-A---GAG-TTCACACAAACGAATGGCAGAT
TTCAACAAGCATGCCTCATCCTCGTCTTCGTCCTCCTGTTCCTCCGATTCATCTT-CTC-ATCCGAAGACGATTCTTCCT
CCTCCTCTTCATTGTTGCACGCCGC-ATCATCATGTGGAGCTCGGAAGGTGTTGGCAAGATTTTCAACG---------GA
AGGTGTGTGATGAGGCACACCGGAA-GACATTCCGCCCATGCCGCCCGAAGGTGCTCCCATGCCTCCCATGAGAGACGCA
AAGCTCATGCCTCCCATGGTAGC---------TCCGAAGCCAGCCATGCCTCCCATGA---------TAGCTCCGAAGCC
ACCCATGCCTCCCATGGCCTCCACAGTAGCTCCGAA
>chr4B_2997
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------------------------------------------------------------------------------GC
GCTTGCTCCAGCGACCGCTGCAAAGTTTAACGTGCGCGAGCCGCTTCAACATACACGCT-AAATTGCAGCGTGCGCGAGC
AGCCGACGATTGCCATAT---GTTGCGTTTTGGA---GACGATAAT--GATATTTG---------------AAACATGAA
AACAAA-------CATAGTTTAAAATCACCCAACACAAGTTC-GTAACATA--------------CAAGTTCAAATTCAT
GCTCACAACATCATCCAACCAAGTTCAAAAGCCGAACCAGGTTCTTGAC-ATAAAAG-TTCACACAAACGAATGGCACA-
-TCAACAATCATGCCTCATCCTTGTCTTCGTCCTCC---------GATTCATCTT-CCTTATCCAAAGACGATTCTTCCT
CCTCCTCTTCATTGTCGCACGCGTGAATCATCATGTGGAGCTTGGAAGGTGTTGGCAATATCTTCAACA---------GA
AAGTGTATGATGAGGCACACCGGAA-GACATTCCGCCCATGCCGCCCGGAGGTGCTCCCATGCCTCCCATGAGAGACGCA
AAGCTCATGCCTCCCATGGTAGC---------TCCAAAGCCACCCATGCCTCCCATGACCTCCACGGTAGCTCCGAAGCC
ACCCATGTTACTCATGCCACCCATGGTAGCTCCGAA
>chr6B_2997
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------------------------------------------------------------------------------GC
GCTTGCTCTAGCGGACGCTGCAAATTTTCGCGCGTGCGAGCAGCTCCAGCAGGTGCGCT-AAAAAGCAGTGCGCGCGAGC
AGCCGACGCTTGCCATAT---GTTGCATTTTGAACACGA----GAT--GATATTTC---------------AAACATCAA
GACAAATACATGGTATAA-TTTAAATCACCCAA-ACAAGTTC-ATGACATAAAAGCTCATGCCCGCAAGTTCAGATTCAT
GCCCACAACATCATTCAACCAAGTTCAAAATCCGAACCAAGTTCATGAC-AT-AAAATTTCACACCAACGAATGGCCCA-
-TCAACAATCAAGCCTCGTCCTCGTCTTCATCTTCCTCTTCCTCTTCCTCCGATTCATC-ATCCGAAGACGATTCTTCCT
CCTCCTCTTCATTGTCGCGCGTGGC-ATCATCATTTGAAGCTCGGAAGGTGTTGGCAAGATATTCAACGACATCATGCGA
AGGTGTG---TGAGGCACAACGGAA-GACATTCCGCCCATGCCGCCCGGAGGTGCTCCCATGCCTCCCATGAGAGACGCA
AAACTCAGGCATCCCATGCCGCCTAGAGGTGATCCGAAGCCACCCATGCCTCCCATGGTCTCCATGGTAGCTCCAAAGCC
ACCCATGGCACCCATGCCGCCCATGGTAGCTCCGAA
>chr2B_2997
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------------------------------------------------------------------------------GC
GCTTGCTCCAGCGACCACTGCAAAC-TTAGCACGCGCGAGCCGCTCCAACACATGCGCT-AAACTACAGCGCGCGCGAGC
AGCCGGCGCTAGCCACAT---GTTGCGTTTTGGA---GACGATGAT--GATATTTG---------------AAACATGAA
AACAAAAACATGGCATAGCTGAAAATCACTCAA-GCAAGTTCGATGGCATA--------------AAAGTTCAAATTCAT
GTCCACAACATCATCCAACCAAGTTCAAAATCCGAACGAAGTTCATGAC-AT-AAAG-TTCACACAAACGAATGGCACA-
-TTAACAATCATGCTTCATCCTCGTCTTCGCCCTCCTCTTCCTCCGATTCATCTTCCTC-ACCCGAAGACGATTCTTCCT
CCTCCTCTTCATTGTCGCACGCCGC-ATCATAATGTGGAGCTCGGAATGTGTTGGCAAGATTTTCAACG---------GA
AAGTGTGTGTTGAGGCACACCGAAA-GACATTGCGCCCGTGCTGCCCGGAGGTGCTCCCATGCCTCCCATGAGGCACGCA
AAGCTCATGCCTCCCATGGTAGC---------TCCGAAGCCACCCATGCCACTCATGCCGCCCATGATAGCTCCGAAGCC
ACCCATGCCACCCATGCCTCCCATG-----------
>chr2B_2997
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------------------------------------------------------------------------------GC
GCTTGCTCCAGCGACCACTGCAAAC-TTAGCACGCGCGAGCCGCTCCAACACATGCGCT-AAACTACAGCGCGCGCGAGC
AGCCGGCGCTAGCCACAT---GTTGCGTTTTGGA---GACGATGAT--GATATTTG---------------AAACATGAA
AACAAAAACATGGCATAGCTGAAAATCACTCAA-GCAAGTTCGATGGCATA--------------AAAGTTCAAATTCAT
GTCCACAACATCATCCAACCAAGTTCAAAATCCGAACGAAGTTCATGAC-AT-AAAG-TTCACACAAACGAATGGCACA-
-TTAACAATCATGCTTCATCCTCGTCTTCGCCCTCCTCTTCCTCCGATTCATCTTCCTC-ACCCGAAGACGATTCTTCCT
CCTCCTCTTCATTGTCGCACGCCGC-ATCATAATGTGGAGCTCGGAATGTGTTGGCAAGATTTTCAACG---------GA
AAGTGTGTGTTGAGGCACACCGAAA-GACATTGCGCCCGTGCTGCCCGGAGGTGCTCCCATGCCTCCCATGAGGCACGCA
AAGCTCATGCCTCCCATGGTAGC---------TCCGAAGCCACCCATGCCACTCATGCCGCCCATGATAGCTCCGAAGCC
ACCCATGCCACCCATGCCTCCCATG-----------
>SNPs
---------------S---------SS---------------S----------S--------------------------
----S--------S---S-S-----S--------S---------S--------------------------------S--
-----S----S--S----S-------------------S-----------------------------------------
-------------------------------------------S------------------------------------
-------------------------------------------------------------SS-----------------
--------------------------------------------------------------------------------
----------------S-----------------------------------------------S----------SS-SS
SS---S------S-------------------------S-------------S---------------------------
-SS------S-SS--S-SS-------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S--S-------------------------------------S--SSSS------S
S-SS-S-S-SSSSSSS--S-S--SSSSSS---------------------------------------------------
------------------------------------------------SSSS-S--------------------------
--S-----S------S----------------------S------------------------S--SSS-----------
--------S-----SS----S-----S--------SS-S-------------------------S---------------
-----------------S------------S-----S-----S----S------------S-------------------
--------------------------------------------------------------------------------
--------------------------------SSS---------------------------------------------
------------S-------------------------------------------------------------------
------S------S---SS---S----SSSS------S-----SS--S------------S-------------------
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---------------------------------------------------S-S---S-SS-----SSS-SSSSS--SS-
--------------------------------------------------------------------------------
-------------S----S--------S---------------S---SSS--S----SS---SSSSSSSSSS--------
----------------S--SSSS---------------------------------------S-----------------
---------------------------S------------S----S----------------------------------
--------------------------------------------------------S------------S----------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S-----------------------------------------------S---S--------------------S--
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S---------------------------------------------------
------------------S------------------------S-----------S-----S------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS--------S------------------------------S--------S--S--------
----------S-------------------------S-------S---S-S----------------S------------
-------------------------------------------S--S-------------------------S-------
--S-----------------------------------------------------------------------------
-----S-----S--------------------------------------------------------------------
--------S------S------S--------------------------S------------------------------
----------------------------------------S---------------------S-----------------
----------------------S---------------------------------------------------------
--S-----------------------------------------------S--------------------------S--
-------------------------------------------------------------S------------------
--------------------------------S---
>forward_158
--------------------------------------------------------------------------------
----------------------------------------------------------GCTTGGGAGGAGCTACAAGG--
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>reverse_3577
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--------------------------------------------------------CAATGTTCGACACAGCGGTC----
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>forward_3486
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--------------------------CACAAACCGAACGTGAACGC----------------------------------
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>reverse_4931
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--------------------------------------------------TGGATCGCCTGTTTTTGTGC----------
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------------------------------------
