>input_sequence_47619
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------ATGGGCAACGAGTTGTGAGTTCCTCCCGTTC-------------------TGTTTCCGTGTATGTACA
TCTCCCGTTAATTGCGTGGCTGTTCTGCTCTGGTGAACTGAGAAATGCCGCTCTTGT-----CCTGGGTGCAGCGACTAC
CTGTTCAAGCTCCTCTTGATCGGCGACTCCTCGGTCGGCAAGTCCTGCTTCCTCCTCCGTTTCTCCGTGAGTTTCTTACT
ACTACTACTACTCCTTGCAATGCGGGTGGA-----TGGACTGACCAATGGCGCCATCTTCCTTCTCAACATCACACATAA
AAACATGGTCC-----------TGATTTTTCTTCTTCATCCAGGACGATTCGTATGTGGACAGCTACATTAGCACCATCG
GCGTTGACTTTGTGAGTGGCTTCTCCTCGCAGTGCAGCTGTGTTCTTGGAGCATGATTCTCTCGCTGGTTA---------
------TTTCTCATCCTATGTTTGGTTCTTCTCTGATCCATTGATTGACGCACGTGTGCAGAAAATCCGCACTCTCGAGA
TGGATGGGAAGACCATCAAATTGCAGATTGTAAGTGATTAATCCCTATTCTTCTTCACAAGTTTGCATCTCCTTCAAAGT
TTGCTACTTATCACGTAAGGGATATGTTGTCACTTGCAACCATCAACTTTTTGTGTTTTGGAAATGAACTGATTCCCCAT
CAAACTCCTGCATCACAAACATACAAACTGCATTCTACTGCCGGCGGAAACAATTGCGCAAAGCAGAAACCGTAATGCTC
ACAATCTCATCTCATATCAGTATCTC-TTGCATTTACAACAGTGGGACACAGCAGGACAGGAGCGGTTCAGAACCATCAC
AAGCAGCTACTACCGAGGAGCTCACGGGATCATCGTAAGTCTCATCTCCCCAACCGT-AAACAACAACAAAAACTG--CA
ACTTTTACCCACCACAGTTCAGCAAACTTTTGGTTTC-----GTTGTATCCAGATTGTCTATGACATCACGGACATGGAG
AGCTTCAACAATGTCAAGCAATGGCTGAGCGAGATCGACAAGTACGCCAACGACAGCGTGCGCAAGCTACTTGTCGGTAA
CAAGTGTGATCTGGCTGAGAGCAGGGTCGTCGATACTGCGGTGGCACAGGTCACAGTTCCAACTACCCTTTTGCATTCGA
GATACTGATTCATCATAAACTAGGCTCTGTCTGTATACTTGTGGCACGGGAATTCGTCGTGTTCCTGTGGAAAATGAATC
AATTCCTCGTCTGTCGATGCTGAACTTGTTTTGTTGCATATTTTCTTAAGCTA------AATGGGCAATGCAAATCAGTG
CAGGCCTGTGCTGATGAGATGGGTATTCCTTTCCTAGAAACAAGTGCTAAAGAGTCCATCAATGTGGAAGAGGCCTTTTT
GGCAATGTCTGCAGCAATCAAGAAGAGGTAGAAGAGCAAATGAGCTTTCGCATTATTATGTTCAGTTTTTGTTTTTGTTT
TTGGAATGCTTATGCTGATTAAACTTGTGTGTCTGATCCACAGCAAAGCTGGAGGCCTTGAGAGGAAGGCATCCAATCTG
GTCCAGATGAAAGGCCAGCCAATTCAGCAGCAGCAGCACAAGCAGAAGAGCAGCTGCTGTTCAACATGA-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>chr2A_1_TraesCS2A01G311000
GCGATGCTGAAGTGCAATGGTAT-------AAAAGAATTTGCCAGCATCGAAAGAGGCTGATTTGCAA--AAGTAATGCT
ACT-------ATGTGATAACGCGCTTGATATCCGTTTGTGTTTCAGGTCCCGTATCTGATGGATCCAAACACCGGGTTCC
GGTCGGGCGATCACAAGACGATACTGTCCTACTTGTTTCAGCAGTACTCTTTGGGCGGCTAGCTTGTCCCTCAAATCTCG
GCAAATATGCAGACACCTGTCAGATAGGCTGTTTTTTTCCGGTAGAAAGAGAGCAAGCGTGTATATTTGCCGTGATACGG
AGCTTGGCTCTGAAGTATCAGTGGGTTT--------TAGAATTCTCAACATACAGTATATGGTAATGGTATGGGAAGATC
TCGGTGCGTGGCACTGGCATGGCTCTCACGATATCAGAAAAACAGAAAG--AAAAAAAAACGGTATGCACGGCGGTTGCG
C------ACGCACGCATAGTGAGCTAAAGCGGAGCAGCCTTT--GGTTGCGCAACCGAACAAGACTCGCGGCACATGAGA
GAGATGGCACTGCACTGCAGCGGTTCAACGGCGATGTATCATGCCATTGCCATTGTCCGCATCTTTCGGTTGTCTTCTTT
ACATGACGCTACAAGAAAAGGAAAAAAAAAGAATCAATATTGATTGTACTAGGTCTGAGTACCAACAAAGGCACGCGACG
CGCCCGTGATGGATGCTTTG-------TCATCATGAATCTTAAAGAAATGGGGGAGTCAACTGAATCAGGGTCATGTGCA
GGGA------GGGAGCAGTTCCACGTCATGATCCTGCCTGCGTGCGTGCGTGGGGATCGATGATGGAAAAACAAATAACA
AGTGCGCCGGGAGATCAGTTTGCCCTAGTGCACTC-AGAGTCATAACCTTTTTCTACCCTTGAGAAGCCT----CTTCTC
CACCTCTAGCCCACAGGCCAAATCTCTCCGTCTCCGACTTCCTGCTCCGTTCTTGGTCATCTTCCTTTCGGGAGGAGGAG
GGAGGAAGCATCATGGGCAACGAGTTGTGAGTTCCTCCCGTTC-------------------TGTTTCCGTGTATGTACA
TCTCCCGTTAATTGCGTGGCTGTTCTGCTCTGGTGAACTGAGAAATGCCGCTCTTGT-----CCTGGGTGCAGCGACTAC
CTGTTCAAGCTCCTCTTGATCGGCGACTCCTCGGTCGGCAAGTCCTGCTTCCTCCTCCGTTTCTCCGTGAGTTTCTTACT
ACTACTACTACTCCTTGCAATGCGGGTGGA-----TGGACTGACCAATGGCGCCATCTTCCTTCTCAACATCACACATAA
AAACATGGTCC-----------TGATTTTTCTTCTTCATCCAGGACGATTCGTATGTGGACAGCTACATTAGCACCATCG
GCGTTGACTTTGTGAGTGGCTTCTCCTCGCAGTGCAGCTGTGTTCTTGGAGCATGATTCTCTCGCTGGTTA---------
------TTTCTCATCCTATGTTTGGTTCTTCTCTGATCCATTGATTGACGCACGTGTGCAGAAAATCCGCACTCTCGAGA
TGGATGGGAAGACCATCAAATTGCAGATTGTAAGTGATTAATCCCTATTCTTCTTCACAAGTTTGCATCTCCTTCAAAGT
TTGCTACTTATCACGTAAGGGATATGTTGTCACTTGCAACCATCAACTTTTTGTGTTTTGGAAATGAACTGATTCCCCAT
CAAACTCCTGCATCACAAACATACAAACTGCATTCTACTGCCGGCGGAAACAATTGCGCAAAGCAGAAACCGTAATGCTC
ACAATCTCATCTCATATCAGTATCTC-TTGCATTTACAACAGTGGGACACAGCAGGACAGGAGCGGTTCAGAACCATCAC
AAGCAGCTACTACCGAGGAGCTCACGGGATCATCGTAAGTCTCATCTCCCCAACCGT-AAACAACAACAAAAACTG--CA
ACTTTTACCCACCACAGTTCAGCAAACTTTTGGTTTC-----GTTGTATCCAGATTGTCTATGACATCACGGACATGGAG
AGCTTCAACAATGTCAAGCAATGGCTGAGCGAGATCGACAAGTACGCCAACGACAGCGTGCGCAAGCTACTTGTCGGTAA
CAAGTGTGATCTGGCTGAGAGCAGGGTCGTCGATACTGCGGTGGCACAGGTCACAGTTCCAACTACCCTTTTGCATTCGA
GATACTGATTCATCATAAACTAGGCTCTGTCTGTATACTTGTGGCACGGGAATTCGTCGTGTTCCTGTGGAAAATGAATC
AATTCCTCGTCTGTCGATGCTGAACTTGTTTTGTTGCATATTTTCTTAAGCTA------AATGGGCAATGCAAATCAGTG
CAGGCCTGTGCTGATGAGATGGGTATTCCTTTCCTAGAAACAAGTGCTAAAGAGTCCATCAATGTGGAAGAGGCCTTTTT
GGCAATGTCTGCAGCAATCAAGAAGAGGTAGAAGAGCAAATGAGCTTTCGCATTATTATGTTCAGTTTTTGTTTTTGTTT
TTGGAATGCTTATGCTGATTAAACTTGTGTGTCTGATCCACAGCAAAGCTGGAGGCCTTGAGAGGAAGGCATCCAATCTG
GTCCAGATGAAAGGCCAGCCAATTCAGCAGCAGCAGCACAAGCAGAAGAGCAGCTGCTGTTCAACATGACTCGA------
------GGGAGGGTAAAGCATCCCAGCGGCGCAGCTACCTTCCAGGAATCAGGATGAAAATGACATCTGCCAAATGTGAA
CCTCTTTCTTCCTTGCCTTTTGGAACACTTTTTTAGCTAGCTGCAAACTGTATCAGTAAGTGAATTCGCATGTTCGTATC
GATCTTTCAGTGGAGCAACATATGTCGAAATCATGTCAGGAAATTCTGTAATTTCGATGGTTCTCTAATCAGCACAGCAA
CCAGAGTTATAACATATCAGCCATATTGCAATCTGCTAACTGAACAATCTGAAAGACAGTGAATTTACATATGCAAAAGC
TTGTACAGAT----------------------------------------------------------------------
---ACAGATACAGATACAGATGCAGGTTTTGTTTGTACTTTTT-TACATCATGAATTTACAT-------------ACACA
AGGCTATGAGACGTCCTTGCAAGGTCGCCTTGTTGAACTCAAATCGGAACTAGGAGATAACTTGGATAGGTCGGTCATTC
AGGCTACACGAGTACTCCTCTCCATGGTTAGCTGGAGGGGAAACTGCAGTAACATCATGCAATCTGCGAACAGTCCAATC
TGAAAGAGGACGAATCTACATATGAAAA------------------------------AGCATGTACATCGACAGATGCT
GATCTTCTTTCTCCTTTTTACAACATGAAGTGGCACACATAAGGTTATGTGAGTTCCATAAAGGGTAGCCTTGTTGAACT
CAAACCCGAACAGGCGAGATAGCTTGATAGGTTGGTTGTTTAGGCTAGAAGTAGTATCCACCCTCCATGGTTCGCTGGAA
GGGAAATTGTGGCATCATCATGTTGCTGCCGGTGTCCAGAATCCCGCTCTGCTCAATTATCTGCAGAAACAAGATCAAGA
CATTAAAAATAATGTTGGTCTGTTTAAAAATGTTGTTATGTTAGGTCCCTCTTGCTGCAGCAGGGCTGCACTAATTAGAA
TACCAGCATAGAGGGATGCAAAGTGCTGAACCACTTGCATCCCTTAAGCATATGCAAAACTACCTTTTGCCAACAAAT
>chr2D_3
--GATGCTGAAGTGCAATGGTAC-------AAGAGAATTTGCAGGCATCGAAAGAGGCTGATTTGCAA--AAATAATGCT
AT-------GACGTGATAACACGCTTGATAT---TTTGTGTTTCAGGTACCGTATCTGATGGATCCAAACACCGGGTTCC
GATCGGGCGATCACAAGACGATACTGTCCTATTTGTTTCAGCAGTACTCTGTGGGAGGCTAGCTTGTCCCTCAAATCTCG
GCAAATCTGTAGGCACCTCTCAGATAGGCTGTTTTGTCCCGGTAGAAAGAGAGCAAGCGTGTGTATTTGCCGCGATACGG
AGCTTGGCTCTGAAATATCAGTGGGTTT--------TAGAATCCTCAACATATATGGTA---------TATGGGAAGATC
TGGGTGCGTGGCACTGGCATGGCTCTCACGATATCAGAAAAACAGAAAGAAAAAAAAAAACGGTATGCACGGCGGTTGCG
CTTGCGTACGCACGCCCAGTGAAGCCAAAGCGGGCAGCCTTTTTGGTTGCGCAACCGAACAAGAGGAGCGGCGCATGAGA
GAGGCG-----GCACTGCAGCGGTTCAACGGCGACGTATCATGTCATTGCCGTTGTCCGCGTCTTTCGGTTGTCTTATTT
ACATGACGCTACAAGAAAAAGAAAAAAAGACAATATTGAT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>chr2B_3
--GATGCTGAAGTGCAATGGTATAACCTATAAGAGAATCTGCAGGCATAGAAAGAAGCTGATCTGCAAGAAAATACTCCT
AGCACGCACGATGTGATAACGCGCTTGATGCTTC---GTGTTTCAGGTACCGTATCTGATGGATCCAAACACCGGGTTCC
GATCGGGCGATCACAAGACGATACTGTCCTACTTGTTTCAGCAGTACTCTGTGGGCGGCTAGCTTGTCTCTCAAATCTT-
---------TAGACACCTCTCCGACAGGCTGTTTTG-TCCGGTAGAAAGAGAGCAAGCGTGTATATTTG-----------
AGATTGGCTCTGAAATATCACTGGGTTCTAGTACAGTAGAATTCTCAACATATATGGTA---------TGCATG------
-----------------------------------------------------------------------------GCG
GTTGCGCACGCACGCCCAGTG-AGCCAAAGCGGAGCAGCCTTTGGGTTGCGCAACCGAACAAGAGGAGCGGCACATGAGA
GAGGCG-----GCACTGCATCGGTCCAACGGCGACGTATCATGCCATTGCCATTGTCCGCATCTTTCGGTTGTCTTCTTT
ACAT-ACGCTACAATAAAAGAAA---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>chr2D_657
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------AGGTCTGAGCACCAACAAAGGCACGCGACG
CGCCCGTGATGGATGCTTTTGTCATCATCATCATGAATCCTAAAGAAAGGGGGGAGTCAACTCAATCAGGGTCATGTGCA
GGGAGGGGAGGGGAGCAGTTCCACGTCATGATCCTGCCTGCGTGCGTG----GGGATCGATGATGGAAAAACAAAAAATA
AGTGCACTGGGAGATCAGTTTGCACGAGTGCACTCTAGAGTTATAACCTTTTTCTGCCCTCGAGAAGCCTCTCCCTTCTC
CACCTCTAGCCCACAGGCCAAATCTCTCCGTCTCTGATTTCCTGCTCCGTTCGTCGTCTTCTTCCTTTGGGGAGGAGGAG
GAAG-------CATGGGCAACGAGTTGTGAGTTCCTCCCGTCTCTATTTTCGCGCCTGGTTTTGTTTCCGTGTATGTACA
TCTCCCGTTAATTGCCTGGCTGTTCTGCTCTGACGCGCTGCAAAATGCTGCTCTTGTCCTGACCTGGGTGCAGCGACTAC
CTGTTCAAGCTCCTCTTGATCGGCGACTCCTCGGTCGGCAAGTCCTGCTTCCTCCTCCGTTTCTCCGTGAGTTTCTTACT
ACTACTGCTCCTTG--GCAATGTGGGTGGA-----TGGACTGACCAATGGCGTCATCATCCTTCTCAAGATCACACATAA
TGGCATGGTCCTGATTTTCTTGTGATTTTTCTTCTTCCTCCAGGACGATTCGTATGTGGACAGCTACATTAGCACCATCG
GCGTTGACTTTGTGAGTGGCTTCTCCTCGCATTGCAGCTGTGTTCTTG----ATGATTCTCTCGCTAGTTG---------
------TTTC-CATCCTACGTCTGCTTCTTCTCTGATCCATTGATTGATGCACGTGTACAGAAAATCCGCACTCTCGAGA
TGGATGGGAAGACCATCAAATTGCAGATTGTAAGTGATTAATCCCTACTCTTCTTCACAAGTTTGCCTCTTCTTCAAAGT
TTGCTA----TCACGTAAGGAGGCAAAC--------------------TTTTGTGTATTGGAAATGAACTGATTA-CCAT
GAAATTCCTGCATCACAAACATACAAGCTGCATTCTACTGCCGGTGGAAACAATTGCACAAAGCAGAAACTGTAATGCTC
GCAATCTCATCTGATATCAGTACCTC-TTGCATTTACAACAGTGGGACACAGCAGGGCAGGAGCGGTTCAGAACCATCAC
AAGCAGCTACTACCGAGGAGCTCACGGGATCATCGTAAGTCTCATCTGCCCAACTGT-AAACAACAACAAAAACTG--CA
ACTTTTACCCACCACAGTTCAGCAAACTTTTGGTTTC-----GCTGTATCCAGATTGTCTATGACATCACGGACATGGAG
AGCTTCAACAATGTCAAGCAATGGCTGAGCGAGATCGACAAGTACGCTAACGACAGTGTGCGCAAGCTACTTGTCGGTAA
CAAGTGTGATCTGGCTGAGAGCAGGGTCGTCGATACTGCCGTAGCACAGGTCACAGTTCCGACTACCCTTTTGCATTTGG
GATACTGAC---TCATAAACTAGGCTCTGTCTGTATACTTGTAGCACGGGAATTCGTCGTGTTCCTGTGGAAAATGAATC
AATTCCTCGTATGCTGATGTTGATATTGTTTTGTTG------------AGCTA------AATGGGCAATGCAAATCAGTG
CAGGCATATGCTGATGAGATGGGTATTCCTTTCCTAGAAACAAGTGCTAAAGAGTCCATCAATGTCGAAGAGGCCTTTCT
GGCAATGTCTGCAGCAATCAAGAAGAGGTAGAAGAGCAAATGAGCTTTCACATTATTATGTTCAGTTTTTGTTTTTGTTT
TTGGAATGCTTATGCTGATGAAACTTGTGTGTCTGATCCACAGCAAAGCTGGAGGCCTGGAGAGGAAGGCATCCAATCTG
GTCCAGATGAAAGGCCAGCCAATTCAGAAGCAGCAGCACAAGCAGAAGAGCAGCTGCTGTTCAACATGACTCAAGATCGG
ACTCGAGGGAGGGTAAAGCATCCCAGCGGCACAGCTACCTTCCAGGAATCAGGATGAAAATGGCATCTGCCAAATGTGAA
CCTCTTTCTTCCTTGCCTTTTGGAACACTTTTTTAGCTAGCTGCAAACTGTATCAGTAAGCGAGTTCGCATGTTCGTATC
GATCTTTCAGTGGAGCAACATATGTCGAAATCATGTCAGGAAACTCTGTGATTTCGATGGTTCTCTAATCAGCACAGCAA
CCAGAGTTAGAACATGTCAGCCATATTGCAATCTGCTAACTGGACAATCTGAAAGACAGTGAATTTACATATGCAAAAAC
TTGTACAGATACAT------------------------------------------------------------------
-ATACAGAAACAGATGCAGATGCAGATTTTGTTTGTACTTTTTTTACATCATGAAGTGGAACTAGGAGACAAATCACACA
AGGCTATGAGACGTCCTTGCAAGGTCGCCTTGTCGAACTCAAATCGGAACTAGGAGATAACTTGGATAGGTCGGTCATTC
GGGCTACACGAGTACTCCTCTCGATGGTTAGCTGGAGGGTGAACTGCGGTAACATCATGCAATCTGCGAACAGTCCAATC
TGAAAGAGGATGAGTCTACATATGACAATCTGAAAGAGGATGAGTCTACATATGAAAAAGCATGTACATCGACAGATGCT
GATCTTCTTTCTCCTTTTTACAACATGAAGTGGCACACATAAGGTTATGTGAGTTCCATAAAGGGTAGCCTTGTTGAACT
CAAACCCGAACTGGCGAGATAGCTTGATAGGTTGGTTGTTTAGGCTAGAAGTAGTATCCACCCTCCATGGTTCGCTGGAA
GGGAAATTGTGGCATCATCATGTTGCTGCCGGTGTCCAGAATCCCGCTCTGCTCAATTATCTGCAGAAACAAGATCAAGA
TATTAAAAATAATGTTGGTC------------------------------------------------------------
------------------------------------------------------------------------------
>chr2B_692
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GTGATGGATGCTTTG-------TCATCATGAATCCTAAAGAAAAGGGTGAGTCAACTCAATCAGGGTCATGTGCA
GGGAGGG------AGCAGTTCCACGTCATGATCCTGCCTGCGTGCGTG----GGGATCGATGATGGAAAAACAAAAAACA
AC-GCACCGGGAGATCAGTTTGCACTAGTGCACTCCAGAGTTATGACCTTTTTCTGCCCATGAGAAGCCTCT----TCTC
CACCTCTAGCCCACAGGCCAAATCTCTCCGTCTCTGACTTCCTGCTCCGTTCTTGGTCTTCTTCCTTTGGGGAGGAGGAG
TAAG-------CATGGGCAACGAGTTGTGAGTTCCTTCCGTTTCTATTTTCGCGCCTGGTTTTGTTTCCGTGTATGTACA
TTTCCCGTTAATTGCCTGGTTGTTCTGCTCTGGTGAACTGAAAAATGCCGCTCTTGTCCTGACCTGGGTGCAGCGACTAC
CTGTTCAAGCTCCTCCTGATCGGCGACTCCTCCGTCGGCAAGTCCTGCTTCCTCCTCCGTTTCTCCGTGAGTTTCTTGGT
ACCACTACTCCTTG--GCAATGTGGGTGGGTGGAGTGGACTGACCAATGGCGCCGTCTTCCTTCTCAAGATCGCGCATAA
TGGCATGGTCCTGATTTTCTTGTGATTTTTCTTCTTCATCCAGGACGATTCGTATGTGGACAGCTACATTAGCACCATCG
GCGTTGACTTTGTGAGC---------------------------CTTG----ATGATTCTCTCTCGCTACTTAGTACTGT
ACGCACTTTCTCATCCTATGTTTGGTTCCATTGATTGATTGA---TGATGCACGTGTGCAGAAAATCCGCACTCTCGAGA
TGGATGGGAAGACCATCAAACTGCAGATTGTAAGTGATTAATCCCTATTCTTCTTCACAAGTTTGCCTCTCCTTCAAAGT
TTGCTA----TCACGTAAGGGATATGTTGTCACCTGCAATCGTCAACTTTTTGTGTATTGGAAATGAACTGGTTCCCCAT
CAAACCCCTGCATCACAAACATACAAACTGCATTCCACTGCCGGTGGAAACAATTGCACAAAGCAGAAACCGTAATGCTC
GCAGTCTCATCTCATATCAGTACCTCTTTGCATTCACAACAGTGGGACACAGCAGGACAGGAGCGGTTCAGAACCATCAC
AAGCAGCTACTACCGAGGGGCTCACGGCATCATCGTAAGTCTCATCTCTCCACCTGTAAAACAACAACAAAAAATTCCCA
GCTTTTACCCACCGCAATTCAGCAAGCGTTTCGTTTCCTTGAGTTGTATCCAGATTGTCTATGACATCACGGACATGGAG
AGCTTCAACAATGTCAAGCAATGGCTGAGCGAGATCGACAAGTACGCCAACGACAGTGTGCGCAAGCTTCTTGTTGGTAA
CAAGTGTGATCTGGCTGAGAGCAGGGTCGTCGATACTGCCGTAGCACAGGTCACTTTTCCAACTACCCTCTTGCACTCGA
GATACTGAC---TTATAAACTAGGCTATGTCTCCATAC-------------------------CCTGTGGAAAATGAATC
AATTCCTCATTTGTCGATGCCGATATTGTTTTGTTGCATATTTTGTTAAGCTCAATGCCAATGCGCAATGCAAACCATTG
CAGGCCTATGCTGATGAGATGGGTATTCCTTTCCTAGAGACAAGTGCTAAAGAATCCATCAATGTTGAAGAGGCCTTTTT
GGCAATGTCTGCAGCAATCAAGAAGAGGTAGAGGAGCAAATGAACTTCCACACTATTACTTTCTGTTA-----------T
TTGGAATGCTTATGCTGATGAAACTTGTGTGTCTGATCCACAGCAAAGCTGGAGGCCTGGAGAGGAAGGCCTCTAATCTG
GTGCAGATGAAAGGCCAGCCAATTCAGCAGCAGCAGCACAAGCAGAAGAGCAGCTGCTGTTCAACATGACCCGAGATCGG
ACTTGTGGGAGGGTAAGGCATCCCAGCAGCACAGCTAGCTTCCAGGAATCAGGATGAAAATGGCATCTGCCAAATGTGAA
CTTATTACTTCTTTCCCTTTTGGAACACATTTTTAGCTAGCTGCAAACTGTATCAGTAAGCGAGTTCGCATGTTCGTATC
GATCTTTCACTGGAGCAACATATGTCGAAATCATGTCAGGAAACTCTGCGATTTCGGTGGTTCTCTAATCAGCACGACAA
CCAGAGTTATACCATATCAACCATATTGCAATCTGCTAACTGGAC----------------AATTTACATATGCAAAAGC
TTGTACAGATACAGATACAGATGCAGTTTTTTTTTTGAGGGATACAGATACAGATACAGATGCAGATTTTTTTTTTGAGG
GATACAGATACAGATACAGATGCAGATTTTGTTTGTACTTTTT-TACATCATGAAGTGGC------AGACACATCACACA
AGGCTATGAGACGTCCTTGCAAGGTCGCCTTGTCGAACTCAAATCGGAACTAGGAGATAACTTGGATAGGTCGGTCGTTC
AGGCTACACGAGTACTCCTCTCCATGGTCAGCTGGAGGGGAAAGTGCGGTAACATCATGCAATCTGCGAATAGTCCAATC
TGAAAGATGATGAATCTACATATGAAAA-----------------------------AAGCATGTACATCGACAGATGCT
GATCTTCTTTTTCCTTTTTACAACATGAAGTGGCACACATAAGGTTATGTGAGTTCCATAAAGGGTAGCCTTGTTGAACT
CAAACCCGAACTGGCGAGCTAGCTTGATAGGTTGGTTGTTTAGGCTAGAAGTAGTAGTCACTCTCCATGGTTCGCTGGAA
GGGAAATTGTGGCATCATCATGTTGCTGCCAGTGTCCAGAATCCCGCTCTGCTCAATTATCTGCAGAAACAAGATCAAGA
CATTAAAAATAATGTTGGTCTGATTAAAAATGTTGTTATGTTAGGTCCCTCTTGCTGCAGCAGGGCTGCACTAACTAGAA
TACCAGCGTAGAGGGATGCAAAGTACTGAACCACTTGCATCCCTGAAGCATATCCAAAACTACTTTTTGCCAGCAAAT
>SNPs
SS------------------------------S---------SS----------------------------S-------
-SS----------------------------SSS--------------S-------------------------------
-S------------------------------------------------S-----------------------------
------S--S--------S----------------S------------------------------------S-------
--------------S-------------------------------------S-SSS--SSSSSSSSS------------
-S------------------------------------------------------------------------------
---------------SS-----SSSS--SSS-S-------------------------------SSS-------------
---SS-SSSSS-----------------------S---------------------------------------------
----------------------------S-S---SSSS--SSSSSSSSSS---------S--------------------
---------------------------------------S--------S-------------S-----------------
------------------------------------------------SSSS-----------------------S----
-----S-----------------S-----------------S-------------S------------------------
----------------------------------S-----------------------S---------S-----------
-S--SSSSSSS-------------------------------S-------------------------------------
---------------S-------------------------S--------------------------------------
--------------------------------------------------------------------------------
---------S--SSSS------S---------------------------------------------S-----------
SSS-----------------------------------------------------------------------------
-------------------------------S----------------SSSS--------------S---S---------
------------------------------------------------S-------------------------------
------------------------------------------------------------------S-------------
------SSSS-----------------------S-----S-S--------------S-----------------------
--------------------------------------------S------------S----------------------
S---------------------S---------------------------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
---------------------------------------S--S-------------------------------------
--------SSSS------------------------------S-------------------------------------
----------S------------SS-------------------S-----------------------------------
-------S---------------------------------------------------------S--------------
-------------------------------------------------S------------------------------
-------------------S--------------------------------------S---------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------S-----------------
------------------------------------------------------------S--S----------------
-------------------------------------------S-----S------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-------------------------S-----------------------------S-SS--S------------------
---------------------------------S----------------------------------------------
-----------------------------------------------S--------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------S-----
-------S----------------S-------------------S--------S---------S--------S-----
>forward_922
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GCCCTAGTGCACTCAGAGTC--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_1805
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------CGGAAACAATTGCGCAAAGC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_995
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GGCCAAATCTCTCCGTCTCC---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2203
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GGCACAGGTCACAGTTCCAA------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_1490
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------AGTGCAGCTGTGTTCTTGGA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2619
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------TGAGAGGAAGGCATCCAATCTG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_1491
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GTGCAGCTGTGTTCTTGGAG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_3182
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TACACAAGGCTATGAGACG
TCC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
