>input_sequence_47564
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---ATGGAGGCGCATATGGCGGCAGCCCGCCCGCCGACGCACCACCACAGCCACGGCCACCAGCAG------CAGCAGCA
GCAGCAGAAGGCGGCCAACCTGGCGCGCACCTTCACCAAGCTGCTCCGCCGGAAGCGCTCCGACTCCGCCGCGGC---GG
CGAGGGCCGGGGCCGGGCCCAAGGAGGCG---GATGCGCCGGCCTCCGTCGCCGGGGACGACTACGACAGCTCCCTGGAC
GCCACCACCCCCACCACTGGGACGGCGCCCGCCATGCCGTCGCTCAGCAAGCTCAAGCTCTCCGGGAACCTCGCCGCGGC
CTACTCCCTCGACGCCTTCTTCAGGAACGCCGCAGAGAAGAAGGCCGCCGGGGCGC------AGCAGCCGTCGCCGCCGG
CCGCCGCGCCGGATGCGGCCGCGGACTCCCTCCTCGCCAATCTGTTCGCCGGCGTCTCGGCCGTCAAGGCGGCCTATGCG
CAGCTGCAGCTCGCGCAGTTCCCCTATGATGCGGAGGCCATTCAGTCCGCGGACGCCGCCGTCGTCGCGGAGCTCACCAG
GCTGTCCGACACCAAGCGCAGGTTCCTCAAGGACCCCGCCGGCGCGGCCAGGGACGCCGCGGCGGCGGGCAACACCGCCC
TCTCCGCGCATGCCGAGGAGCAGCGGCATCTGCTCAAGACGTACCAGATCACGGCGCGCAAGCTGGAGGCGGAGCTCCGG
ACGAAGGATGCGGAGCTCGACCGCGCCAAGGGCTCCCTCGATGCGGAGCTCCGGGCGGAGCGCGCCATGGAGGTGCGCCT
GCATCCGGGCCGCACCCTCGCGTCGCTGGACGAGCTCCACGTCTCCGGCCTCAACCCCACCCACTTCCTCACCGCCCTGC
GGCACGCCGTGAAGTCGATCCGCTCCTTCTCCAAGTCAATGCTCAGCTCGATGCAGGCGGCCGGGTGGGATCTGACCGCG
GCGGCCGCCGCCGTCCACCCAGGCGTGCCGTTGCGACGGGCCGGGGACGCCAAGTTCGTCTTCGAATCCTACGTCGCCAT
GAAGATGTTCGCCAATTTCCACCGGAGGGACTTCAATTTCAGCTTCCTGGACGAGCGGGAGTTCTACGAGCGCCGCCGCT
TCTTCGAGGAGTTCACGGAGCTCAAGGCGGCGCCGGCCAGCGTCTTCCTCGACGTGCGGAACGGCCGGTGGAGCGGGTTC
GGCAAGTTCCTGCGCGCCAAGTACCTGTCGCTGGTGCACGCGAGGATGGAGACGGCCTTCTTCGGGCGGCAGGAGCAGCG
CGGCATCGTGAGCGCCGGGCCCGGGTTCCCGGAGAGCTCGTGGTTCGCCGAGTTCGCGGAGATGGCGCGCCGCGTGTGGC
TGCTGCATTGCCTCTTCTACGCGTTCGACGGCGGCGAGGAGGAGGACGGCGCGTCCATCTTCCAGGTCCGGACGGGCGCG
CGGTTCGCGGAGGTGTACATGGAGAGCGTCAACGAGGGGCGCACGGAGGACGCGTTCTGCACCGCCGCCGAGGACCGCAC
CGTCGGCTTCACCGTGGTACCGGGGTTTAGAGTCGGCCGGACGGTGATCCAATGCCGCGTGTACCTGGCGCGGCCGGGCC
GGCGGCCGTGA---------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------
>chr3A_1_TraesCS3A01G138000
TGCCACTCTCGGCGGGTGTTTGGTTCCATTGCCAACGTTCGGCGCGCCGTGCACCTTTTTTTTCTTCTTCCAGTTGTGTT
GTTTTGGCGCCATTTGTTTGGGCCGCAGCAGGTCCAGCCCGTCTGCCGCTGCTGTCTCGTGGCGAGCGGTACGGTGGTAG
CGAGGGGCGGCTTTTGGGTTTTTGACACGAGCGCGGCCGGCACGGCTGCGCGAGGCTCACGCGCCTGCTTCGCTTTGGCC
AGGCGTGTCGGCACGTGTGCGCGCGTGTGGGGCTCCCCCCTCCGCCTCCGGTGAGTTCAACGGTTCAATGCGCGCTGACG
AGGAGCGTGCC---------------------------CGTACGCGTACCCGGGAGATGACGGAGACAAGAGGAGAGCGC
CCGCCTGCCCCAGTTTTTTTCTCTATCGATGACATCCAGCACCTATTTATCAGTTCCTAGATTTTTTTTTTTGAACTTTA
TCAGTTCCTAGATTTGGTTTGTCAGGATTAACTACTAGTGGCCTCTTCTTTTGCACGAATCAATTTTTACCCTTGAGTAA
ATTTC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------TTTTCTTCTGGCTGGAAGATGAATTCTTACCGTCAAAGCTAGAAAAAAACGACTGTTTGTGCCTACCTC
TACCGCATG---------GTGTCATCGGTAGGAGCACTGCGGCACAGTGATACGCGTCGGCATGCACGCTCCGCTTTTAC
TTTACAGTATCCCCCAAATATTCCTGCTGAAATTTATCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAGCCACAAAGAGGGGACGGGAAGCTGGAGGGGAGCCGCTGAGC-A
GCAATGGAGGCGCATATGGCGGCAGCCCGCCCGCCGACGCACCACCACAGCCACGGCCACCAGCAG------CAGCAGCA
GCAGCAGAAGGCGGCCAACCTGGCGCGCACCTTCACCAAGCTGCTCCGCCGGAAGCGCTCCGACTCCGCCGCGGC---GG
CGAGGGCCGGGGCCGGGCCCAAGGAGGCG---GATGCGCCGGCCTCCGTCGCCGGGGACGACTACGACAGCTCCCTGGAC
GCCACCACCCCCACCACTGGGACGGCGCCCGCCATGCCGTCGCTCAGCAAGCTCAAGCTCTCCGGGAACCTCGCCGCGGC
CTACTCCCTCGACGCCTTCTTCAGGAACGCCGCAGAGAAGAAGGCCGCCGGGGCGC------AGCAGCCGTCGCCGCCGG
CCGCCGCGCCGGATGCGGCCGCGGACTCCCTCCTCGCCAATCTGTTCGCCGGCGTCTCGGCCGTCAAGGCGGCCTATGCG
CAGCTGCAGCTCGCGCAGTTCCCCTATGATGCGGAGGCCATTCAGTCCGCGGACGCCGCCGTCGTCGCGGAGCTCACCAG
GCTGTCCGACACCAAGCGCAGGTTCCTCAAGGACCCCGCCGGCGCGGCCAGGGACGCCGCGGCGGCGGGCAACACCGCCC
TCTCCGCGCATGCCGAGGAGCAGCGGCATCTGCTCAAGACGTACCAGATCACGGCGCGCAAGCTGGAGGCGGAGCTCCGG
ACGAAGGATGCGGAGCTCGACCGCGCCAAGGGCTCCCTCGATGCGGAGCTCCGGGCGGAGCGCGCCATGGAGGTGCGCCT
GCATCCGGGCCGCACCCTCGCGTCGCTGGACGAGCTCCACGTCTCCGGCCTCAACCCCACCCACTTCCTCACCGCCCTGC
GGCACGCCGTGAAGTCGATCCGCTCCTTCTCCAAGTCAATGCTCAGCTCGATGCAGGCGGCCGGGTGGGATCTGACCGCG
GCGGCCGCCGCCGTCCACCCAGGCGTGCCGTTGCGACGGGCCGGGGACGCCAAGTTCGTCTTCGAATCCTACGTCGCCAT
GAAGATGTTCGCCAATTTCCACCGGAGGGACTTCAATTTCAGCTTCCTGGACGAGCGGGAGTTCTACGAGCGCCGCCGCT
TCTTCGAGGAGTTCACGGAGCTCAAGGCGGCGCCGGCCAGCGTCTTCCTCGACGTGCGGAACGGCCGGTGGAGCGGGTTC
GGCAAGTTCCTGCGCGCCAAGTACCTGTCGCTGGTGCACGCGAGGATGGAGACGGCCTTCTTCGGGCGGCAGGAGCAGCG
CGGCATCGTGAGCGCCGGGCCCGGGTTCCCGGAGAGCTCGTGGTTCGCCGAGTTCGCGGAGATGGCGCGCCGCGTGTGGC
TGCTGCATTGCCTCTTCTACGCGTTCGACGGCGGCGAGGAGGAGGACGGCGCGTCCATCTTCCAGGTCCGGACGGGCGCG
CGGTTCGCGGAGGTGTACATGGAGAGCGTCAACGAGGGGCGCACGGAGGACGCGTTCTGCACCGCCGCCGAGGACCGCAC
CGTCGGCTTCACCGTGGTACCGGGGTTTAGAGTCGGCCGGACGGTGATCCAATGCCGCGTGTACCTGGCGCGGCCGGGCC
GGCGGCCGTGAACCGGTTGTAGCAACAAATTAGAACCGTCCTGTTTGTAGCGT----------------CCGGCGGACGA
CGACGACTGGGGAGGAAAAATCCCATTTTGGGGCGGCCGTCGAGGTCTCTCGCCGGCCGCCGGCTGGGGTGGTGATGAAG
ATCATGGTGGTGGTGGGGGTTATGTATCTATTAAGGGATGTAGCGATGTGATCATAATATAAGTGGCAA-TTTCAGTTCG
GACCCATGATCCAGTGTTCTTGCTGTCTTCTTGTCTTGCAGTTTCTCTATTTGCCCGGCATTCTTGCTCAATGTC-----
--------------AAGTACTGATTAGCTATGC-----------------------AGCGTTCCACTTCATGAGCATTCT
CTTCCTGATGGTGTATCACCAAATTTGAGCATTTTCTTTCTGACGGTAGCACAATTTTTCTGATCTGATCAGGTTCGTAT
GCAGATTCCGAACTGCACGTTCGTTCATCCGGTCTTCTTTGGTTCATGGGATAGGAATTTTTCAGGAATAGGAAAATCAT
AGGAGGTGAGATGACATGCATCTTAATTCCTATAGAAAAAGAGATGTCATTTGATGCATAGGATAGGAATTTTTCCATTG
AGTCTTAGCTAATGTTTTTTTTCTCTAAAATGTGAAGGATTGATTCCTATCCTACGTAGGAATAGGAATCCATTCCTACA
AACCAAATAACTTCAAAGAAAATTTTCCTTTATAAATCCTATCCTATAAAAACCTATGAAATTTCTACAAACCAAAGAAG
GCCTTGAATAGTGTTTTTGTTCCCATTTTCGTTCATCCG-GTAACAATAATAAACTGGTTTTGGTTGTTTGTTGATGTGG
GCTTGGTGGCACGTACGTTGGAACTTGTGACCTGCTGTTTTGCAGTTGGTTGGATCCCCTTGGTGGCTTGTGATCGAGCG
CGAAAAAAGTATGCCATCACAAGGAGGCGTATGCCGCGGACTAGTTAATAATCTTGCTGCTGGCCTGTTTGTTTACGCAC
ACGGCGATACGGGAGCAAGACAAATGCTGGT
>chr3B_68
-------------------------------------------------------------------TTCCAGTTGTGTT
GTTTTGGCGCCATTTGTTTTGA--GCCGCAGGTCCGGCCCGTCTGCTGCTGTGG---CGTGGCGAGCGGCTCGCTGCTAG
CGAGGGGCGGCTTTTGGG-TTTTGGCACAAGCGCGCCCGGCACGTCTGCGCGAGGCTCACGCGCCTGCTTCGCTTTGGTC
AGGCGTGTCGGCACGTGTGCGCGCGTGTAGGGCTCCCCCCTCC--CTACGCTGAGTTCAACGGTTCAATGCGCGCTGACG
TCCCCTCAAAAAAAAAAAAATTGCGCGCTGACGAGAGGCGTACCCGTACCCGGTAGATGACGGAGACGAGAGAGCTCGCC
GTATCCTGCCCAG-TTTTTT--------------------------GCTA--------------------------TTTA
TCTGTTCCTAGATATGGTCTGTCAGGATTAACCACT------CTCTTCTTTTACACGGACTAGAAGAACACCCGTGCGTT
GCAACGGGGCCACATTAAGTTTAAAAGTTCAATATTAATATTCTCATATATATCAAGTGACATTGACGACATTTTTTACC
ATCAATTCCTCACACACACTCTCTGCCTCCCTCTTCCTCACTCTCTTGCCCTCCCCCTCTCTCTCTCTAACACACACACA
TATCCATCTTATTGGGTACGGGACCATAATCCATCTATTTCACACACACACACGCTAGTATATAACAATATGGATTATGT
GTATTATATTTGCCACCACAACTGAGGGAATTAATTTCATGTAAATCGGCCAACCACAGCTCCAAGAATACGCGGAGAAG
GTGGCTCGGGTCGGCGTCGGCGCCGTCCGGCACGGGCCACGGGCCCGCTTCCAAGCGCGTCTGCGCGTCGGCCACCCACG
CCGTGTCCTTCAAGTGCCACTTCCACCGCACCAACTCCCAGGGTCACGGCCATGGCCAGGGCCAGGGAAGCCGCCCTTCT
TTGCCCCCTTCATCGGCCGCGGCCAACACGGTGTCGCGGCACCCGGCCTCGCCGTCCTCGTCCTCCAGCACCGTCGCGAC
CTAGTGACGCAGCCCAAGCATCGGCCTCGAGAATCAAGAACGCTCGGCAACGTAGAGGGAAGGAAAGGTCATATACATGT
CATAAGAAAGGGAGTTTATTTACTGCTCCCTCGATGTATTGTTTCCTTTGTTTGGAGATTGATTACCATCCGTGAGTTAA
GGTAAGGTTTACGTGATTGAGCGATTTTTTGAAAATCAATTATTTGTTTTCTAATTAATGTAATTGAGTGATTTAAGGTA
AGGTTAATTAATTTAGATTTGATCTTGAGAGATTGTTCGTGATTGATTCTACATTACTAAATAATTTACGCCAGTATGGA
AAGTTCTGATCTGTTTAGATTTCTTTCGTTATGTGAGAGGGTGACGCGAAAATAAACCGATGAAGTGAGGGGAGGGAACG
AAAAAAATCTACGAAAAAAAACCAGCGAAGATGGAGGAGGTACCAAAAAAAACCATGGAAGGTGGGAGGAGACTACCAAC
TGCTTCATTAGGAGTAGAAATTATTAGAGATTAGAGATTATTTGTTTTCTGAAAATTTATTATTTGTTTACTAAAGCAAA
TTGCATTAATGAGAGAGATTTCGTAGATTTGGCTAAGGTAGGAAATAATCTATTATTTGTTTGCTAAAGCAAATTGCATT
AACGGGAGAGATCCGTTGATTTGGCTAAGGTAGGAAAGAATATATTATTTGTTTGCTAAAGCAAATTGCATTAATAGAAG
AGATCCGTTGATTTGGCTAAGGTAGGAAAGAATCTATTATTTGTTTCCCAAAGAAAATTGCATTAATGAGAGAGATTTGT
TGATTTGGCTAAGGTAGGTGGTTTTTGCGGTTCGTGGCGGCTTAGTGTGAGGTGGGACGAGGTACAAAAAAACCATGGGA
GGTGGGACAAAAGAAAAACTTGAGAGGTGGGAGTTGTCCCTGGTTAACCTACGAAATTTCGTAGATTTTTTTAGGACGAA
AAAACCCGTGAGAGGTGGGACTAAAAAAACCCTGGAAGCGAGACTACCAACTGCTTCCTTAGGAGTAGAGATTGATTTGT
GCCTGCTGTCATTTGCTTCTGGCTGGAAAATGAATTCTTACCGTCTAACTAAAAAAATGCTGCTGTGCTGCCTAGAGTAC
CTATCGCTCA---------TGTCATCGGTAGGAGCACGGCCGCACAGTAATACGCGTCGGCCTGCACGCTCCGCTTTTAC
TTTACAGTATCCCCCAAATATTCCTGCTGAAATTTATCCCACTCCTCCCTCCTACCTTCGTCCCCCCCTCCCTCT-GCAG
AGACAGACAGCACAGCCGAGCCAAGCCAGGAGCAG---------------------------------------------
--------------------------------------------------------------------------------
---------------------------------CCAGCCACAAAGAGGGGAGGGGAAGCTGGAGGGGAGGCGCTGAGCGA
GCAATGGAGGCGCATATGGCGGCGGCCCGACCGCCGACGCACCACCACAACCACAGCCACAG---------CCAGCAGCA
GCAGCAGAAGGCGGCCAACCTGGCGCGCACGTTCACCAAGCTGCTCCGCCGGAAGCGCTCCGACTCCGCGGCGGCGAAGG
CGGGGGCCGGGGCCGGGGCCAAGGAGGCG---GATGCGCCGCCGTCCGTCACCGGGGACGACTACGACAGCTCCATGGAC
GCCACCACCCCCACCACCGCCACCACGGCCACCATGCCGTCGCTCAGCAAGCTCAAGCTCTCCGGGAACCTCGCCGCGGC
CTACTCCCTCGACGCCTTCTTCCGCAACGCCGCCGAGAAGAAGGCCGCCGGGGCGCCCCAGCAGCAGCCCTCGCCGCCGG
CCGCCGCGACGGTTGCCGCCGCGGACTCCCTCCTCGCCAATCTGTTCGCGGGCGTCTCGGCCGTCAAGGCGGCCTACGCG
CAGCTGCAGCTCGCGCAGTTCCCCTACGACGCGGAGGCCATTCAGTCCGCGGACGCCGCCGTGGTCGCGGAGCTCACCAG
GTTGTCCGACACCAAGCGGAGGTTCCTCAAGGATCCCGCCGGCGCGGCCAGGGACGCCGCGGCGGCGGGCAACACCGCCC
TCTCCGCGCATGCCGAGGAGCAGCGGCATCTGCTCAAGACGTACCAGATCACGGCGCGCAAGCTGGAGGCGGAGCTCCGT
GCCAAGGATGCGGAGCTCGACCGCGCCAAGGGCTCCCTCGATGCGGAGCTCCGGGCGGAGCGCGCCATGGAGGTGCGCCT
GCATCCGGGCCGCACCCTCGCGTCGCTGGACGAGCTCCACGTCTCCGGCCTCAACCCCACCCACTTCCTCACCGCCCTGC
GGCACGCCGTGAAGTCGATCCGCTCCTTCTCCAAGTCAATGCTCAGCTCGATGCAGGCAGCTGGGTGGGATCTGACCGCG
GCGGCCGCCGCCGTCCACCCAGGCGTCCCGTTGCGACGGGCCGGGGACGCCAAGTTCGTCTTCGAATCCTACGTCGCCAT
GAAGATGTTCGCCAATTTCCACCGGAGGGACTTCAATTTCAGCTTCTTGGACGAGCGGGAGTTCTACGAGCGGCGCCGCT
TCTTCGAGGAGTTCACGGAGCTCAAGGCGGCGCCGGCCAGCGTCTTCCTCGACGTGCGGAACACCCGGTGGAGCGGATTC
GGCAAGTTCTTGCGCGCCAAGTACCTGTCGCTGGTGCACGCCAGGATGGAGACGGCCTTCTTCGGCAGGCAGGAGCAGCG
CGGCATCGTGAGCGCCGGGCCCGGGTTCCCGGAGAGCTCGTGGTTCGCCGAGTTCGCGGAGATGGCGCGCCGCGTGTGGC
TGCTGCATTGCCTCTTCTACGCGTTCGACGGCGGCGACGAGGAGGACGGCACGTCCATCTTCCAGGTCCGGACCGGCGCG
CGGTTCGCGGAGGTGTACATGGAGAGCGTCAACGACGGGCGCACGGAGGACGCGTTCTGCACCGCCGCCGAGGACCGAAC
CGTCGGGTTCACCGTAGTACCTGGGTTTAGAGTCGGCCGTACGGTGATCCAATGCCGCGTGTACCTGGCGCGGCCGGGAC
GGCGGCCGTGAT----------CAGCAAATTAGAACCGCCCTGTTTGGGGCGC----------------CCGGCG---GA
CGACGATTGGGGAGGAAAATTCCCATTTTGGGGCGGCCGTCGAGGTCTCTCGCCGGTCGCCGGCTGGGGTGGC------G
ATCATGGTGGTGGCGGGGGTTATGTATCTATTAAGGGATGTAGCGATGTGATCATAATATAAGTGAC-A-TTTCAGTTCG
GATCCATGATGCGGTGCTCTTGCTATCTTGTTGTCTTGCAGTCTGCTAATTTTCACGGCATGCTTGCTCAAGGA-TTGTC
TGATGGTAGCACCGAATTTCAGATGATTCCAACTGAAAATTTCAGATGATTTCTCTAGCGTTCCAGTTCATGAGCATTTT
CTGTCTGATGGT-----------------------------------AGCACCAAATTTGTGATCTGATCAAGTTCATAC
GCAGATT-CCAGCTGCACGTTCCTCTGGTGAACATGGTCTGAATT-----------------------------------
--------------------------------------------------------------------------------
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--CTTGAATGGTGTTTTTGTTCCCGGGAATCCCACGGCCAGTAACAATAATAAACTTGTTTTGGTTGTTTGTTGACGTGG
CCTTGGTGGTACGTACGTTGGAACTTGTGGCTTGCTGTTTTGCAGTTGGTTGGATCCCCTTGGTGGTTTGTGATCGAGCG
CT-AAAAAGTATGCGATCATAA----GCGTATGCCGCGGACTAGTTAATAATCTTGCTGCTGGCCTGTTTGTTACG----
-------------------------------
>chr3D_173
--------------------------------------------------------------------------------
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------------TTTGGG-TTTTGGCACAAGCGCGGGCGGCACGGCTGCGCGAGGCTCACGCGCCTGCTTCGCTTTGGCC
AGGCGTGTCGGCACGTGTGCGCGCGTGTGGGGCTCCCCCCTCC--CTGCGCTGAGTTCAACGGTTCAATGC---------
------------------------GCGCTGACGAGAGGCGTACCCGTACCCGGTAGATGACGGAGATAAGAGAGCTCGCC
GTATCCTGCCCAG-TTTTTTCTCTATCGCTAGCATCCAGCACCCTTGCTA--------------------------TTTA
TCAGTTCCTAGGTTCGGTTTGTCCGGATTAACTAGT------CTCTTCTTTTACCCGAATCCATTTGTACCCACAGTA--
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----------ATTTGCTTCTGGCTGGAAAATGAATTCTTACCGTCAAAGTAAAAAAAAGAAC---TGCTGCCTAGAAGTA
GTACATGTGGCTCGTGTCGTGTCATCGGTAGGAGCACGGCCGCACAGTAATACGCGTCGGCCTGCACGCTCCGCTTTTAC
TTTACAGTATCCCCCAAATATTCCTGCTGAAATTTATCCCACTCCTCCCTCCCACCTTCGT-CCCCCCTCCCTCCCGCAG
AGACAGACAGCACAGCCGAGCCGAGCCAGGAGCAG---------------------------------------------
--------------------------------------------------------------------------------
---------------------------------CCAGCCACAAAGAGGGGAGGGGAAGCTGGAGGGGAGGCGCTGAGCGA
GCAATGGAGGCGCACATGGCGGCGGCCCGCCCGCCGACGCACCACCACAGCCACAGCCACAGCCACACCCACCAGCAGCA
GCAGCAGAAGGCGGCCAACCTGGCGCGCACCTTCACCAAGCTCCTCCGCCGGAAGCGCTCCGACTCCGCCGC--------
----GGCGGGGGCCGGGCCCAAGGAGACAGTCGATGCGCCGCCGTCCGTCACCGGGGACGACTACGACAGCTCCATGGAC
GCCACGACGCCCACCACCGCGACGGCTCCCACCATGCCGTCGCTCAGCAAGCTCAAGCTCTCTGGGAACCTCGCCGCGGC
CTACTCCCTCGACGCCTTCTTCCGCAACGCCGCGGAGAAGAAGGCCGCCGGGGCGCCGCAGCAGCAGCCCTCGCCCCCGG
CCGCCGCGACGGTTGCCGCCGCGGACTCCCTCCTCGCCAATCTGTTCGCGGGCGTCTCGGCCGTCAAGGCGGCCTACGCG
CAGCTGCAGCTCGCGCAGTTCCCCTACGACGCGGAGGCCATTCAGTCCGCGGACGCCGCCGTCGTCGCGGAGCTCACCAG
GCTGTCCGACACCAAGCGGAGGTTCCTCAAGGATCCCGCCGGCGCGGCCAGGGACGCCGCGGCGGCGGGCAACACCGCCC
TCTCCGCGCATGCCGAGGAGCAGCGGCATCTGCTCAAGACGTACCAGATCACGGCGCGCAAGCTGGAGGCGGAGCTCCGG
GCCAAGGATGCGGAGCTCGACCGCGCCAAGGGCTCCCTCGATGCGGAGCTCCGGGCGGAGCGCGCCATGGAGGTGCGCCT
GCATCCGGGCCGCACCCTCGCGTCGCTGGACGAGCTCCACGTCTCCGGCCTCAACCCCACCCACTTCCTCACCGCCCTGC
GGCACGCCGTGAAGTCGATCCGCTCCTTCTCCAAGTCAATGCTCAGCTCGATGCAGGCAGCTGGGTGGGATCTGGCCGCG
GCGGCCGCCGCCGTCCACCCAGGCGTCCCGTTGCGACGGGCCGGGGACGCCAAGTTCGTCTTCGAATCCTACGTCGCCAT
GAAGATGTTCGCCAATTTCCACCGGAGGGACTTCAATTTCAGCTTCTTGGACGAGCGGGAGTTCTACGAGCGCCGCCGCT
TCTTCGAGGAGTTCACGGAGCTCAAGGCGGCGCCGGCCAGCGTCTTCCTCGACGTGCGGAACACCCGGTGGAGCGGGTTC
GGCAAGTTCCTGCGCGCCAAGTACCTGTCGCTGGTGCACGCGAGGATGGAGACGGCCTTCTTCGGGAGGCAGGAGCAGCG
CGGCATCGTGAGCGCCGGGCCCGGGTTCCCGGAGAGCTCGTGGTTCGCCGAGTTCGCCGAGATGGCGCGTCGCGTGTGGC
TGCTGCATTGCCTCTTCTACGCGGTCGACGGCGGCGAGGAGGAGGACGGCGCGTCCATCTTCCAGGTCCGGACCGGCGCG
CGGTTCGCAGAGGTGTACATGGAGAGCGTCAACGAGGGGCGCACGGAGGACGCGTTCTGCACCGCCGCCGAGGACCGCAC
CGTCGGGTTCACCGTGGTACCTGGGTTTAGAGTCGGCCGGACGGTGATCCAATGCCGCGTGTACCTGGCGCGGCCGGGAC
GGCGGCCGTGAT----------CAGCAAATTAGAACCGTCCTGTTTGGGGATTCCCCTGTTTGGGGCGTCCGGCG---GA
CGACGATTGGGGAGGAAAATTCCCATTTTGGGGCGGCCGTCGAGGTCTCTCGCCGGTCGCCGGCTGGGGTGGT------G
ATCATGGTGGTGGTGGGGGTTATGTATCTATTAAGGGATGTAGCGATGTGATCATAATATAAGTGAC-AATTTCAGTTCG
GATCCATGATGCAGTGCTCTTGCTGTCTTCTTGTCTTGCAGTCTGTTCATTTTCGCGGCATGCTTGCTCAAGGATTTGTC
TGATGGTAGCACCGAATTCCAGATGATTTGTCC-----------------------GGCGTTCCAGTTTATGATCATTTT
CTGTCTGATAAT-----------------------------------AGCACCAAATTTCTGATCTAAACAAGTTCATAC
GCAGATTCCCAGCTGCACGTTCATCCGGTGAACATGGTCTGAATT-----------------------------------
--------------------------------------------------------------------------------
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--CTTGAATGGTGTTTTTGTTCCCGGGAATCCCACGGCCAGTAACCATAATAAACTTGTTTTGGTTGTTTGTTGATGTGG
CCTTGGTGGCACGTACGTTGGAACTTGTGACTTGCTGTTTTGCAGTTGGTTGGATCCCCTTGGTGGTTTGTGATCGAGCG
CT-AAAAAGTATGCGATCA--A----GCGTATGCCGCGGACTAGTTAATAATCTTGCTGCTGGCCTTTGTTACG------
-------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------
-------------------S-SSS--S--------S----------S----SS-SSS------------SS--S--S---
------------------S-----S---S---------------------------------------------------
-------------------------------------------SS--S--S-----------------------------
SSSSSSSSSSS--------------------------------S---------S------------------SSSSSSS-
SSSS-SSS-----S--------------S-SS-----------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
------------------------------------SSSSSS----------S-------------S-----SSSSSSSS
SSSS----------------------------------------------------------------------------
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--------------S-------------S--------------------SS-S-----S-S-SSSSSS--SSSSS-SS--
SSS-SSS------------------------------S--S-------S------------S------------------
----------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------S-----------------S----------
-----------------------S------------------------------S-----SSS--S--------------
--------------------------------------------------------------------------------
--S--------------------------------------S-S------S-----------------------S-----
-----------------S-S----------S-------------------------------------------------
----------------------S-S--------S-----------------------------------S----------
--------S---S---S--------------------------------S--------------------------S---
--------------------------S--S--------------------------------------------------
------------------S--------------S----------------------------------------------
--------------------------------------------------------------------------------
S-S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S--S------------------
--------------------------S-----------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------SS----------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
------S--------------S--------------------------------------------------------S-
-----------SSSSSSSSSSS--S----------------------SS--------------------------SSS--
------S------------S------------------------------------S----------------SSSSSS-
-----------------------------------------------------------------S-S------------
--S-------S-----S-------------------------S-S-SS----S-S------S---------S-SS-----
----------------S-S-S---S-SS-S-S---------------------------------S------------S-
--SS--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S-SS---------------S----S--S
---------S-S----------S-S-SSSSSSSS-SS-S--SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS-------S--------------SSSSSSSSSSSSS-S-----------------S-----------------------
S------------------------------S----------------------------------S-------------
-SS-----------S----S--SSSS-----------------------------------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_33
-------------GGGTGTTTGGTTCCATTGCC-----------------------------------------------
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>reverse_3147
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--------------------------TGATGCGGAGGCCATTCAG-----------------------------------
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-------------------------------
>forward_185
--------------------------------------------------------------------------------
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-----GGCGGCTTTTGGGTTTTTGA-------------------------------------------------------
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>reverse_3727
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------CTGGACGAGCGGGAGTTCTA--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>forward_2246
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TTTGTGCCTACCTC
TACCGC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_4182
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GGGGTTTAGAGTCGGCCG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>forward_2278
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------GTGTCATCGGTAGGAGCACT------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>reverse_4262
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------GCAACAAATTAGAACCGTCCTGT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
