>input_sequence_47552
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-----------------------------------------------------------------ATGTCCATCCCCCGC
CGATCGCCGCC---GCCGACATCGCCGCCGTGCTCCGGCCTCCTCGGCGCCCTCCACCACAGCGTCTCGGCCGGCCACGC
CTCCGCCGCCGTCTCCCTCCTGCCCACCCTCTCCCGAGCCGGCCTGCGCCCGCCCTTCCCGCTCCTCTCCTCGCTCGCCC
GCCTCCTCCTGCTCCGCCGCGCCGCGCCGTCCTTCCCCGCCCTGGCAGGCCGCCTGCTGCTCTACATACGCCTCGCCGGC
CTCAAGCATTTCGTCCCCTCCTCCACCCAGCTCGCCAACCACCTCCTTTCTCTGCATTTCCTCCTCGGCCGGCCGCGCGA
CGCCCGCCGCCTGTTCGCCAGAATGCCCCGCCACAGCGTGTACTCCTGCAATGCCATGTTAGCGGGGTACGCCCACCTCT
CCCTCGCAGCTCCGGCGGCGGAGATCTTTGCGGCTATGCCGCATCACGACCTCACCTCCTATAACTCTGCTATGCTTGCG
CTCGCGGGCGGTGGAGAAATGCGGGGAAGCTTGGTGCTGTACTCCGACCTCCGGCACACGTCTCCTTCCCTTGGCTACAG
CGATCACACCTTCTCGGCGCTCCTGGTGGCGTGCGCTGGTCTCATGGACAGGGGCCTTGCTAGGCAGCTCCATGCCCATT
TATCTCATCTTGGGTTCTTGTCTGATATTGACATCGCCAGTTCCCTTGTTGATGTGTACAGAAAATGTGGCTGCATTGCT
GATGCACATAGGCTGTTCGACGAGATGCCTGTGAAAGACTTGCGCATGTGGACATCAATAGTTTGCGGCTACGCAGAGGA
TGGCCAGATGAGTCCTGCTCGTCAGATCTTTGATCAGATGCAAAAAAGGAGTATCATTTCATGGAATGCTCTCATGGAGG
GATATGTTCGTCATGGACAGGCAGCAGAAGCATTGAGTATTTTTAAGCATTTGATCAAGGATGGTCTTCAACCAGATCAG
TCCACCTTCAGTAGCGCTTTGTCTGCTTGTGCAGCTATTGGTTCAGTGACACATGGTAAGCAGATCCATGGGATGTTGCT
ACAAACTGGTTTTGATCCCAGTGTAATTGTTCTTAGCTCACTCATTGACATGTACTCGAAAGGTGGTTATCTGGCCGGTG
CCAGGCAGGTTTTCAGTCTAGCATGTCAGGAGAGGAGGGATACTGTGCTGTGGAATGCAATGTTATCTGCTCTATGCCAT
CATGTCCATGGACAGGACGCGATAGGATTGTTTGTTCAGATGATTCGGGAGCGAGTGAAGCCTGATGCTAACACATTTTT
GCTAGTTTTGACAGCTTGTTGCCATTGCGGCCTAGTTGATGAAGGCATGAATTTCTTGGAGTTGATGAGCAAGAGATACA
GGATTGTTCCAGGAGAAGACCATTATGTTTGTGTGGTGGATTTGATCAGCTGTTCATCCCGTTCATGTGATGAAGTAGTT
GAATGGATCAGAAGTTCACCATTCGGTTCTAGCAAACAAGCTTGGGAAACTTTGGTTGGGAAATGCGCGATAAATGGCAA
CGCAGAGTTGATGAGTAAAGCAGAGGAGCAGCTAGCCGAACTAGACAGTCCAAAATAA----------------------
--------------------------------------------------------------------------------
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---------------------------------------------
>chr1B_1_TraesCS1B01G228200
TCTAATGCTTTTCCACTCCATTTTCCTCATTTTGCAGTGCAATCTATTTTCGACATTATATTTGCAGATGAAATTTGTTA
GGTTGGGTGTGTGTTGGTGTGTCCTACTATCTGGAGCCTTATTACCCAGACATATTGAAGGCATTGTATTTTGATCTACT
TTCTCATCTAGACAAAGCATGAAGGTGGCTGCAGGTTCAGGTT------TCCCAATTGCTGACAAAGCGCAAGCTGGAAT
TATTTTACGGAACCATTTAGCTTGTG---------------------------------GCAATGTTCTGTCTCGT--TG
TATGGTCAAAGTCTTTATTTCTGGAATTTGGTATCAATCAAACTATTGATGTGCTGCAACTTAAAGTGGTCTGGTGAAAG
CGCCTTGAGGAAATACTGTAGTTACTGGAAGTTTCCTGTGCGAAGCTGCTACTGTGCGGACTATTATGACCTAGCTTTGC
TCGTTTGACCCTTTTGTTCTCGGTTTTATGTAACTATATCAGTCCTGGAGATTGCAAGTTATCAAACCTTTTTATTGAGA
AA------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
ATTTCTTTCAAACTTGTAAATGCCAAATTACGGAATGT-------------GAATGGACAAATTGTGCTGGGTTTCTCTT
TCATAAAGTTCTTCCA--------AGAGAAGAAACCCTTGCCGCGGCCGGCCACCGTTTCAGAAAATGTTGTTCTGTGG-
-----------------------------------------TATACTGATAACTGGTCAACACTCAACTGGCAGCTTGGT
GAAAGAGAAACTGCTCATAATTCAGATGGAACGCAAATCAACACTCGTCGTGTGTTCAAATTGTTTCCAAATTGCGGCCC
TGTGTTTC---GTAGAGTAGATGCTCGTCGTTCCTGGTCACATTTTTCTCTCGTCGCCTCGCGGGGGATGGTGGCC-TGC
GGAGTTCGGATCTGGATCGACCAGCGGGGTTCGGTTCATCGCGGCCGTCCGGATTTTGAATTGGACGGCCCACGTCGGCG
GCAGAGCACATGTCAGCACGAGCGCCCTTCCCGTCGTGCGCTCGGCCCCCTCCCCTCCCCACCCAATGTCCATCCCCCGC
CGATCGCCGCC---GCCGACATCGCCGCCGTGCTCCGGCCTCCTCGGCGCCCTCCACCACAGCGTCTCGGCCGGCCACGC
CTCCGCCGCCGTCTCCCTCCTGCCCACCCTCTCCCGAGCCGGCCTGCGCCCGCCCTTCCCGCTCCTCTCCTCGCTCGCCC
GCCTCCTCCTGCTCCGCCGCGCCGCGCCGTCCTTCCCCGCCCTGGCAGGCCGCCTGCTGCTCTACATACGCCTCGCCGGC
CTCAAGCATTTCGTCCCCTCCTCCACCCAGCTCGCCAACCACCTCCTTTCTCTGCATTTCCTCCTCGGCCGGCCGCGCGA
CGCCCGCCGCCTGTTCGCCAGAATGCCCCGCCACAGCGTGTACTCCTGCAATGCCATGTTAGCGGGGTACGCCCACCTCT
CCCTCGCAGCTCCGGCGGCGGAGATCTTTGCGGCTATGCCGCATCACGACCTCACCTCCTATAACTCTGCTATGCTTGCG
CTCGCGGGCGGTGGAGAAATGCGGGGAAGCTTGGTGCTGTACTCCGACCTCCGGCACACGTCTCCTTCCCTTGGCTACAG
CGATCACACCTTCTCGGCGCTCCTGGTGGCGTGCGCTGGTCTCATGGACAGGGGCCTTGCTAGGCAGCTCCATGCCCATT
TATCTCATCTTGGGTTCTTGTCTGATATTGACATCGCCAGTTCCCTTGTTGATGTGTACAGAAAATGTGGCTGCATTGCT
GATGCACATAGGCTGTTCGACGAGATGCCTGTGAAAGACTTGCGCATGTGGACATCAATAGTTTGCGGCTACGCAGAGGA
TGGCCAGATGAGTCCTGCTCGTCAGATCTTTGATCAGATGCAAAAAAGGAGTATCATTTCATGGAATGCTCTCATGGAGG
GATATGTTCGTCATGGACAGGCAGCAGAAGCATTGAGTATTTTTAAGCATTTGATCAAGGATGGTCTTCAACCAGATCAG
TCCACCTTCAGTAGCGCTTTGTCTGCTTGTGCAGCTATTGGTTCAGTGACACATGGTAAGCAGATCCATGGGATGTTGCT
ACAAACTGGTTTTGATCCCAGTGTAATTGTTCTTAGCTCACTCATTGACATGTACTCGAAAGGTGGTTATCTGGCCGGTG
CCAGGCAGGTTTTCAGTCTAGCATGTCAGGAGAGGAGGGATACTGTGCTGTGGAATGCAATGTTATCTGCTCTATGCCAT
CATGTCCATGGACAGGACGCGATAGGATTGTTTGTTCAGATGATTCGGGAGCGAGTGAAGCCTGATGCTAACACATTTTT
GCTAGTTTTGACAGCTTGTTGCCATTGCGGCCTAGTTGATGAAGGCATGAATTTCTTGGAGTTGATGAGCAAGAGATACA
GGATTGTTCCAGGAGAAGACCATTATGTTTGTGTGGTGGATTTGATCAGCTGTTCATCCCGTTCATGTGATGAAGTAGTT
GAATGGATCAGAAGTTCACCATTCGGTTCTAGCAAACAAGCTTGGGAAACTTTGGTTGGGAAATGCGCGATAAATGGCAA
CGCAGAGTTGATGAGTAAAGCAGAGGAGCAGCTAGCCGAACTAGACAGTCCAAAATAAATGAGTGCTTGCTCTTCAAAGT
TTGTTTTGCGAGGTTATCTCCCTTGACTCCCATGTTGAAGAAGGCTCAGGCAGACAAATTACTTTGTGATAAGAACTTTG
GCATGGTGAAAGCTGTTTGTTCTTTGCACAGGAGACATTCTTTTGTGAACAGAGACTGGATAAGTGC-----ATCCCTGA
ACAAGTGTGATGTAGCAGTGGCATCATAAAGAATCGGTGGTGAAGGGACCTGCAGACATGGGCGTTCTGCTGGGCCTGGT
GTAATTGAAGGAAGAGGGAACGGATATTCTTGAGCAAATAAT--GCTGCGGCTTGGCATACCAAGTAAAGAGTGAAAAAG
CGATTTCACAAATATTGTCAAGCTAACATCGCTTTGTCATGTCACATGCCAATGGACACAGGACACACCGAAACAGGAAG
CTCAGCATTACTATTTTTCTGCGCTACATTCACTTGAAAGT-------------------TTGTAGGTACAAATAATTCA
TCATCCATATTGTATCTGCATCTGTGTCCAGTTTTAGAAAATGATGTACAGATACCTTGCATTACAGCAAGGAAATATGA
TTTTGCTCAGGTTAGCATGTAGTTGTGTCCACAGGATTACATGGCAGATGAAACAAATAAACATAGGCTATTGCAAATTT
AGCAATATATTTCTGATGCTGGTGCATAAATCATGTATGTTGTTTGTGTACAAATATGTGTGACAAAGCTAATCCATAAA
CATGGATGTTGT-TTTTCTTTTGCTTCTACAGGTGATACATTCATTTCATATGCGTACCTAAGATATAAACTGTAACATT
TCATATACATACTCCATAAATATGGATGTTGTTGTTCACAGGATTACAATGGCAGATGTTGTGTACAAACATGTTTCTGC
TGCAAAATGCCATCATGTTCAACAACGTACATGGTACATCAAATATCTTAAAGAAGCAGACAAAATTCCCTAGAAAAGCC
TAACTATGTATGTTGAGAATTGCGCTATCTGCTTGGATGTTGCAA
>chr1D_1
TCTAATGCTTTTCCACTCCAACTTTCTCATTTTGCAGTGCAATCTATTTTTGACATTATATTTGCTGATGAAATTTGTTA
AGTTGGGTGTGTGT--------CCTACTGCCGGGAGCCTATC-ACCCAGACATGTCGAAGCCACTGTATTTTGATCTACT
TTCTCATCTAGACAAAGCATGAAGGTGGCTGCAGTTTCAGGTTTAATGATCCCAATTGCTGACAAAGCTCAAGCTGGAAT
TAATTTACAGAACCGTTTAGCTTGTAAACCTGCAAGAGGGGTCGACATATTGGGAAGTAGCAATGTTCCGTCTGTAGGTG
TATGGTCAAAGTCTTTATTTCTGGAATTTGGTATCAA----ACTATTGATCTGCTGCAACTTAAAGTGGTATGGTGAAAG
TGCCTTGTGGAAA-----TAGTTACTGGAAGTTTCCT-----------------------------------AGCTTTGC
TTATTTGACCCTTTTGTTCTCTGTTCTATGTAAC--TATCAGTCCTGGAGATTGCAGGTTTCGAAG--TTTTTCTTGAGA
AAAACTCACTCCATTCACAAATACTGTATAAGATTTTTTGGATATTTCAATATGAATTACATACGGACTAAAATGAGTGA
ACAAACACACCAAAATGTGTCTATATATATCCGATTCACAAAAAAGTTAGAACATCTTAGTATTTGTGAATGGAGGGAGT
ATTTCTTTCGACTTTGGTACAAGAACCAACAAAATTCAAATTATTGAGTGAGAATGGCCAAATTGTGCTGGGTTTCTCTT
TTATAAAGTTCTTTCGTTTGCTGTAGAGAATAAATCCTCACA--GGACGGCCACCGTTTTGAAAAATCTCGTACTCCCTC
CGTTTTAAAATAAGTGTCTCAACTTTGTACTAACTTTGAAATATACTGATAATTGGTCAACACTCAACTGGCATCTGGGT
GAAAGAGAAACTGGTCATAATTCAGATGGAACGCAAATCAAAACTCATCGTGTGTTCAAATTGTTTCCAAATTGCGGCCT
TGTGTTTCGTAGTAGAGTGGATGCTCGTCGCTCCTGCTCACATTTTTCTCTCGTGGCCTCGCGGGGG-TGGTGGCC-TGC
GGACTTCGGATCTGGATCGACCAGCGGGGTTCGGTCCATCGCGGCCGTCCAGATTTTGAATTGGACGGCCCACGTCGGCG
GCAGAGCACATGTCAGCACGAGCGCCCTTCCCGTCGTGCGCTCGGCCCCCTCCCCTCCCCACCCAATGTCCATCCCCCGC
CGATCGCCGCCGCCGCCGACATCGCCGCCGTGCTCCGGCCTCCTCGGCGCCCTTCACCACAGCGTCTCGGCCGGCCACGC
CTCCGCCGCCGTCTCGCTCCTGCCCACCCTCTCCCGCGCGGGCCTGCGCCCGCCCTGCCCGCTCCTCTCCTCGCTCGCCC
GCCTCCTCCTGCTCCGCCGCGCCGCGCCGTCCTTCCCCGCCCTGGCAGGCCGCCTGCTGCTCTACATACGCCTCGCCGGC
CTCAAGCATTTCGTCCCCTCCTCCACCCAGCTCGCCAACCACCTCCTTTCTCTGCATTTCCTCCTCGGCCGGCCGCGCGA
CGCCCGCCGCCTGTTCGCCAGAATGCCCCGCCACAGCGTGTACTCCTGCAACGCCATGTTAGCGGGGTACGCCCACCTCT
CCCTCGCAGCCCCGGCGGCGGAGATCTTTGCTGCTATGCCGCAACGCGACCTCAACTCCTATAACTCTGCTATGCTCGCG
CTCGCCGGCGGTGGAGAAATGCGGGGAAGCTTGGTGCTCTACTCCGAGCTCCGGCACACGTCTCCTTCCCTTGGCTACAC
CGATCACACCTTCTCGGCACTCCTGGTGTCTTGCGCTGGTCTCATGGACAGGGACCTTGCCAGGCAGCTCCATGCCCATT
TGTCTCATCTTGGGTTCTTGTCTGATATTGACATCGCCAGTTCCCTTGTTGATGTGTACAGAAAATGTGGCTGCATTGCT
GATGCACATAGGCTGTTCGACGAGATGCCTGTGAAAGACTTGTGCATGTGGACATCGATAGTTTGCGGCTACGCAGAGGA
TGGCCAGATGAGTCCTGCTCGTCAGATCTTTGATCAGATGCAAAAAAGGAGTATCATTTCATGGAATGCTCTCATGGAGG
GATATGTTCGTCATGGACAGGCAGCAGAAGCATTGAGTATTTTTAAGCATTTGATCAAGGATGGTCTTCAACCAGATCAG
TCCACCTTCAGTAGCGCTTTGTCTGCTTGTGCAGCTATTGGTTCAGTGACACATGGTAAGCAGATCCATGGCATGTTGCT
ACAAACTGGTTTTGATCCCAGTGTAATTGTTCTTAGCTCACTCATTGACATGTACTCGAAAGGTGGTTATCTGGCCGGTG
CCAGGCAGGTTTTCAGTCTAGCATGTCAGGAGAGGAGGGATACTGTGTTGTGGAATGCAATGTTATCTGCTCTATGCCAT
CATGTCCATGGACAGGACACGATAGGATTGTTTGTTCAGATGATTCGGGAGCGAGTGAAGCCTGATGCTAACACGTTTTT
GCTAGTTTTGACAGCTTGTTGCCATTGCAGCCTAGTTGATGAAGGCATGAATTTCTTTGATTTGATGACCAAGAGATACA
GGATTGTTCCAAGAGAAGACCATTATGTTTGTGTGGTGGATTTGATCAGCCGTTCATCCCGTTCATGCGATGAAGTAGTT
GAATGGATCAGAAGTTCACAATTCGGTTCTAGCAAACAAGCTTGGGAAACTTTGGTTGGGAAATGCGCGATAAACGGGAA
CACAGAGTTGATGAGTAAAGCAGAGGAGCACCTAGCCGAACTGGGCAGTCCAAAATAAATGAGTGCTTGCTCTTCAAAGT
TTGTTTTGTGAGGTTATCTCCCTTGACTCCAATGTTGAAGGATGCTCAGGCAGACAGATTACTT-GTGATAAGAACTTTG
TCACAGTGAGAGCTGTTTGTTCTTTGCACAGGAGACATTCTTTTGAGAACAGAGACTGGACAGGTGCATCATATCCCTGA
ACAAGCGCGGTATAACAATTGCATCATAAAGAATCGGTGGTGAAGGGACCTGCGGACATGGGGGTTCTGCTGGGCGTGGC
GTAACTGAAGGAAGAGG-AACAGATATTCTTGAGCAAATAATGCGTTGCGACTTGGCATACCAAGTAAATAGCGAAGAAG
TGATTTCACAAATATTTTCAAGTAAACATCGCTTTGTCATGTCACATGCCAATGGACACAGGAAG--------CAGGAAG
CTCAGCATTACTATTTTTCTGCTGGCCTT---CTTGAGATTGCTGCATTCACTTGAAAAATTGTAGGTACAAATAGTTCA
TCATCCATATTGTATCTGCATCTGTGTCCAGTTTCAGAAAATGTTGTACAGATA-CTTGCATTACAGCAAGGAAATGTGA
TTTTGTTCAGGTTAGCATGTAGTTGTGTCCACAGGATTACATGGCGGATGAAACAAATAAACATAGGCTATTGCAAATTT
AGCAATATATTTCTGATGCTGGTGCATAAATCGTGTATGTTGTCTGTGTACCAACATGCGTGACAAAGCTACTCCATAAA
CATGGATGTTGT-TTT-CTTTTGCTACCACAGGTGATACATTCATTTCATATGCATACCTAAGATATAAACTGTAACATT
TCATATACATACTCCATAAATATGGATGTTGTTGTTCACAGGATTACAATGGCAGATGTTGTGTACAAACATGTTTCTGC
TGCAGAACGCCATCATGTTCAACAAC-------ATACATCAAATATCTTAAAGAAGCAGATAAAATTCCCTAGAAAAGTC
TAACTATGTATGCTGAGAATTGCGCTATCTGCTTGGATGTTGCAA
>chr1A_661
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-----------------------------------------TATACTGATAATTGGTCAACACTCAACTGGCAGCTGGGT
GGAAGAGAAACTGGTCGTAGTTCAGATGGTACGCAAATCAACACTCATCGTGTGTTCAAAATGTTTCCAAATTGCGGCCT
TGTGTTTCGTAGTAGAGTGGATGCTCGTCGCTCCTGGTGACATTTTTCTCTCGTGGCCTCGTGGGGGATGGTGGCTTTGC
GGATTTCGGATCTGGATCGACCAGCGGGGTTCGGTTCATCGCGGCCGTCCGGATTTTGAATTGGACGGCCCACGTCGGCG
GCAGAGCACATGTCAGCACGAGCGCCCTTCCCGTCGTGCGCTCGGCCCCCTCCCCTCCCCACCCAATGTCCATCCCCCGC
CGATCACCGCCGCCGCCGACACCGCCGCCGTGCCCCGGCCTCCTCGGCGCCCTCCACCACAGCGTCTTGGCCGGCCACGC
CGCCGCCGCCGTCTCCCTCCTGCCCACCCTCTCCCGCGCCGGCCTGCGCCCGCCCTTCCCGCTCCTCTCCTCGCTCGCCC
GCCTCCTCCTGCTCCGCCGCGCCGCGCCGTCCTTCCCCGCCCTGGCAGGCCGCCTGCTGCTCTACGTCCGCCTCGCCGGC
CTCAAGCATTTCGTCGCATATTCCACCCAGCTCGCCAACCACCTCCTGTCTCTGCATTTCCTCCTCGGCCGGCCGCGGGA
CGCCCGCCGCCTGTTCGCCAGAATGCCCCGCCACAGCTTGTACTCCTGCAACGCCATGTTAGCGGGGTACGCCCACCTCT
CCCTCGCAGCCCCTGCAGCGGAGATCTTTGCTGCTATGCCGCAACGCGACCTCAACTCCTATAACTCTGCTATGCTCGCA
CTCGCGAGCGGTGGAGAGATGCGGGGAAGCTTGGTGCTCTACTCCGACCTCCGGCACACGTCTCCTTCCCTTGGCTACAG
CGATCACACCTTCTCGGCGCTCCTGGTGGCGTGCGCTGGTCTCATGGACAGGGACCTTGCCAGGCAGCTCCATGCCCATT
TGTCTCATCTTGGGTTCTTGTCTGATATTAACATCGCCAGTTCCCTTGTTGATGTGTACAGAAAATGTGGCTGCATTGCT
CATGCACATAGGCTGTTCGACGAGATGCCTGTGAAAGACTTGCGGGTGTGGACGTCAATAGTTTGCGGCTACGCAGAGGA
TGGCCAGATGAGTATTGCTCGTCAGATCTTTGATCGGATGCAAAAGAGGAGTATCATTTCATGGAATGCTCTCATGGAGG
GATACGTTCGTAATGGACAGGCAGCAGAAGCATTGAGTATTTTTAAACATTTGATCAAGGATGGTTTTCATCCAGATCAG
TCCACCTTCAGCAGCGCTTTGTCTGCTTGTGCAGCTATTGGTTCAGTGACACATGGTAAGCAGATCCACGGCATGTTGCT
ACAAACTGGTTTTGATCCCAGTGTAATTGTTCTCAGCTCACTCATTGACATGTACTCGAAAGGTGGTTATTTGGCTGGTG
CCAGACAGGTTTTCAGTCTAGCATGTCAGGAGAGGAAGGATACTGTGTTGTGGAATGCAATGTTATCTGCTCTATTCCAT
CATGCCCATGGACAGGACGTGATAGGATTGTTTGTTCAGATGATTCGGGAGCGAGTGAAGCCTGATGCTAACACGTTTTT
GCTAGTTTTGACAGCTTGTTGCCATTGCAGCCTAGTTGATGAAGGCATGAATTTCTTTGATTTGATGACCAAGAGATACA
GGATTGTTCCAGGAGAAGACCATTATGTTTGTGTGGTGGATTTGATCAGCCGTTCATCCCGTTCATGTGATGAAGTAGTT
GAATGGATCAGAAGTTCACCATTCGGTTCTAGCAAACAAGCTTGGGAAACTTTGGTTGGGAAATGCGCGATAAATGGCAA
CGCAGAGTTGATGAGTAAAGCAGAGGAGCAGCTAGCCGAACTGGACAGTCCAAAATAAATGAGTGCTTGCTCTTCAAAGT
TTGTTTTGCGAGGTTATCTCCCTTGACTCCCATGTTGAAGAAGGCTCAGGCAGACAAATTACTTTGTGATAAGAACTTTG
GCATGGTGAAAGCTGTTTGTTCTTTGCACAGGAAACATTCTTTTGTGAACAGAGACTGGATAAGTGC-----ATCCCTGA
ACAAGTGTGATGTAGCAGTGGCATCATAAAGAATCGGTGGTGAAGGGACCTGCAGACATGAGAGTTCTGCTGGGCGTGGT
GTAATTGAAGGAAGAGGGAACGGATATTCTTGAGCAAATAATGCGCTGCGGCTTGGCATACCAAGTAAAGAGTGAAAAAG
CGATTTCACAAATATTGTCAAGCAAACATCGCTCTGTCATGTCACATGCCAATGGACACAGGACACACCGAAACAGGAAG
CTCAGCATTACTATTTTTCTGCTGGCCTT---CTTGAAAGT-------------------TTGTAGGTACAAATAATTCA
TCGTCCATATTGTATCTGCATCTGTGTCCAGTTTCAGAAAATGATGTACAGATA-CTTGCATTACAGCAAGGAAATGTGA
TTTTGCCCAGGTTAGCATGTAGTTGTGTCCACAGGATTACATGGCGGATGAAACAAATAAACATAGGCTATTGCAAATTT
AGCAACATATTTCTGATGCTGGTGCATAAATCGTGTATGTTGTTTGTGTACAAACATGTGTGACAAAGCTAATCCATAAA
CATGGATGTTGTTTTT-CTTTTGCTACTACAGGCGATACATTCATTTCATATGCATACCTAAGATATAAATTGTAATATT
TCATATACATACTCCATAAATATGGATGTTCTCGTCCACAGGATTATGACGGCAGATGTTGTGTACAAACATGTTTCTGC
TGCAGAACGCCATCATGTTCAACAAC-------GTACATCAAATATCTTAAA-AAGCAGACAAAATTCCCTAGAAAAGCC
TAACTATGTATGCTGAGAATTGCGCTATCTACTTGGATGTTGCAA
>SNPs
--------------------SS--S-------------------------S--------------S--------------
S-------------SSSSSSSS------SS-S-------SSSS----------S-S----S--S----------------
----------------------------------S---------------------------------S-----------
--S-----S-----S----------S------------------------------------------S----SSS----
-------------------------------------SSSS---------S-------------------S---------
S------S-----SSSSS-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
-SS------------------S---S--------SS--------------------S---SSS--SSS-----S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S-SS---SS-SSSSS-SSSSSSSS-S-SS-------------------S----------------------
-S-----------S-S--------------S---S---SS-SSS--S------------SSS-----S-S--S--SSSS-
----------------------------------------------------S-----------------------S---
-------------S--------------------------------S--------------------------------S
------------------S-----------S-----------------------S-------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
----------S--------------------S-----------S-S--------S---------------------S---
--------------------------------------S-----------------------------------------
-----------------------------------------------------S------S-------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------S-----
----------------------------S----------------------------S--S-------S-----------
--------------------------------------------------S-----------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S------------S----
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
----------------------SSSS-S-SSS------------------------------------------------
----------------------------------S-------------------S---------------------S---
---------------------------------------------S----------------------------------
--------------------------------S---------------------S-------------------------
----------------S--------S----------------------------S-------------------------
--------------------------------------------------------------------------------
----S--S------------------SSSSSSS-----------------------------------------------
------------S--------------------------------
>forward_464
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--------------------------------------------GCTGCTACTGTGCGGACTAT----------------
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---------------------------------------------
>reverse_1652
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---------------------------------------------------TGCCATGTTAGCGGGGTAC----------
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---------------------------------------------
>forward_1040
--------------------------------------------------------------------------------
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------------------------------------------------------------TTGTTTCCAAATTGCGGCCC
--------------------------------------------------------------------------------
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>reverse_2691
--------------------------------------------------------------------------------
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--------------------------------------------------TGTTCATCCCGTTCATGTGA----------
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---------------------------------------------
>forward_1652
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--------------------------------ACAGCGTGTACTCCTGCAAT----------------------------
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---------------------------------------------
>reverse_3116
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---------------------------------------------------------------------------CTGGT
GTAATTGAAGGAAGAGGGA-------------------------------------------------------------
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---------------------------------------------
