>input_sequence_47517
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----------ATGGCCACCACCTCAAGCGCGGAGCTTCTGCAAGCTGAGGCAGAGCTCGTGCGCCACTCCTTAGGCTACC
TCAAGTCCATGGCGTTGCACAGCGCGGTAAAGCTCGGAATCCCCGACGCTCTCCACCGCTGCGGCGGCGCGGCCTCCTTG
CCCGACCTGTCCTCCACCCTCGCCCTCCCTTGCAGCAAACGACCGTACCTGTCCCGGCTCATGAAGATGCTAGCCGTGGA
AGGAATCTTCACGGCCGTGGCTGTGGATGTGGACGTTCCTACCGCCAGCGGCGGCGAGGGC------------------A
GCGTCCGGTACGGCCTCAACCCGGTGTCTCGCCTTCTTGTCAGCGGCA---GCGGCGCGTGCCTGTCGCCGTGCGTGCTC
ATGGGCACCTCGCCGCTGTTCCTGGAGGCCTCCCTCCGGCTGCACCAGTGGTTCCAGAGGGACGGCCA------GGGTGA
TCAGC------CGGCGTTCGCCATGGCGCACGGCGAGAGCCCCTACGGCGCGGCCGGCCATGACACGGAGTTCAACGCGC
TGGTGAACGAGGCGATGGGGTCCGACAGCCGACACATGGCGGAGCTCGTCGTCCGCGAGTGCGGCGAGGTGTTCACGGGC
GTGACGTCGCTGGTCGGCGTCGGCGGCGGGAACGGCACCATGGCGACGGCCATCGCCAAGGCCTTCCCGCATGTCAAGTG
TTCGGTGCTGGACCTCCCGCATGTTGTACAAGGC---GTCGTCTCGACACATGAGTCGGTTGAGTTTGCTGCCGGCGACA
TGATGGAATACGTTCCACCAGCTGATGCAGTTCTGCTTAAGGTATA-------ATTTA---TTTTTA--AAAATTTATTT
ACAGTAG--TAAGAAAGGCACATTCTAGCAACTTCCCGTTCACATTTATACCGATTCCTCATGTTGGTCGTAATAATAGT
ATCATAGCTAATATCATGCATGCCAACTAGCCAATTTTGATAAGATATCATATAATTAAATGAAGAAATAGAGGGTTGAG
TATCATATCATATCATGATACCGTATCATAATAAATGCTATATTACTATGTGTCATGCATGGCAATGAAATATAATATTA
CATGATACTAATATATGATACTATGCATTCGGAAGATAGTATCGTACACTAATATCATATGCATGATACTAGTATATGAT
AGTACTTCCTATTACAACCAGCCCCACA-----------------------------------------------AAAC-
------------------------------------------------------------------------AAGTGAGC
GCCTAACGAGA--ATAAACGGATGCATCCGACAAAAAGAAA---AAAATAAATATTAACGTATAAATGTATTGCC-----
--------------------------------------------TGATTTATTACTGATA-TTTTTGACTTGCTCGATTG
GCAGTGTGTGCTACACAACTGGAGCGACGAGGATTGCGTGAAGATCCTGACAAAATGCAGAGAGGCCATTGCCCAAGGAG
CGAAAG------CAGGGAAGGTGATAATCATCGATGCTGTTGTTGGATCTCCTTCACACTCACAGCAAGTACTTCAAGCT
CAAGTCTTGATGGATATGCAAATGATGATGCTATTCATGAGCAAAGAACGTGAGGAACTCAGCTGGCAAAAGATATTCAT
GGAAGCAGGGTTTAGTCATTACAAAATACAGCCCGTCCTAGGGATGCGATCCATCATCCAACTCTACCCATAG-------
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-----------------------------------------------------------------
>chr2A_1_TraesCS2A01G440900
CATTCAAAGGATCCAAATTCGCCAGGGATATGTAATAATTATTAAATTTGGTACTTCATTCAAAAGTCTGAATTCGGGAG
GGACATGTATTAATTAATAAACTTGTGTACCTCATTCAAAAAAACGGACAATATATTTCAACAAACAATATCAATGCTAC
ATTGGTGCTCGAGGAACTTGTTTGTCCTAGCTATTGACCCTTTGGATCCCGGCTACAATTTTCAGGATCCTGAAAGCATG
CACCTGCTGCCAAAAGATCGAGCCCCTAGAGTTCCTTCCTACGAAGTCCGCAGATACGGCCGACCACGCATCACGTGACA
ACTCATCGTCGGTCACCGAGTACCTCGTCATCGTGCTTTACTCTAGAAAACAACAAGAAGTTCGACAAAAAA-GCTCAAT
GAAATTTGACCGAACACCTGTCGGGCGTGGTA--TCCGCCATGGACATCGTCGGCAGAGGGGCGG---------------
--AGGGATCCTGGGTGGACGGTGGC-------------------------------------------------------
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-------------------------------------------------------GTAGTCCAAGGAGGGCATGCGCATT
GGTGGGGTTGTGGACGTCCTATGATACCTGGACGGCGGCCGGAGATGTACAGCCGCGGCGACATCAGACGAGGAAGGTGC
ATATGCAAAGCAAGAGGAAAGCAGAGGTGGATTGGAAGAAAAGTGGATCGAGAGGGGATTTGAGTTGGCCTGAGGTGTTG
GAGTCCTACGTGGCGGCGGTCCGGACTGCGGCAAAGCCCCTCTCTCCTCACAAATTGTCTCCGGTTTGCGGAGTATCGTG
TTTGATGGCAAAATGGGTCTGGACGGTTTGA-GGTCGGCGTTGGAGATGCTCTTATGAGTGGATACCCTGTTTTATTTTG
ATTTGAAGACATTAAACATGGCATGGTACCAGACCCTCTCCTCGTAACACGTGCACCGTTGCTGGTATCGGA--------
-CCTATAAATCATCCCTAGCTGAGATTTGATTCTCAGACCACACCAGTATTACTCAAACTCTTAGTAAAGATCATAATAG
G-------------------------------------------------------------------------------
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-----------------------------------------------------------------------AGAAGAAAG
CAGGGCCAAAATGGCCACCACCTCAAGCGCGGAGCTTCTGCAAGCTGAGGCAGAGCTCGTGCGCCACTCCTTAGGCTACC
TCAAGTCCATGGCGTTGCACAGCGCGGTAAAGCTCGGAATCCCCGACGCTCTCCACCGCTGCGGCGGCGCGGCCTCCTTG
CCCGACCTGTCCTCCACCCTCGCCCTCCCTTGCAGCAAACGACCGTACCTGTCCCGGCTCATGAAGATGCTAGCCGTGGA
AGGAATCTTCACGGCCGTGGCTGTGGATGTGGACGTTCCTACCGCCAGCGGCGGCGAGGGC------------------A
GCGTCCGGTACGGCCTCAACCCGGTGTCTCGCCTTCTTGTCAGCGGCA---GCGGCGCGTGCCTGTCGCCGTGCGTGCTC
ATGGGCACCTCGCCGCTGTTCCTGGAGGCCTCCCTCCGGCTGCACCAGTGGTTCCAGAGGGACGGCCA------GGGTGA
TCAGC------CGGCGTTCGCCATGGCGCACGGCGAGAGCCCCTACGGCGCGGCCGGCCATGACACGGAGTTCAACGCGC
TGGTGAACGAGGCGATGGGGTCCGACAGCCGACACATGGCGGAGCTCGTCGTCCGCGAGTGCGGCGAGGTGTTCACGGGC
GTGACGTCGCTGGTCGGCGTCGGCGGCGGGAACGGCACCATGGCGACGGCCATCGCCAAGGCCTTCCCGCATGTCAAGTG
TTCGGTGCTGGACCTCCCGCATGTTGTACAAGGC---GTCGTCTCGACACATGAGTCGGTTGAGTTTGCTGCCGGCGACA
TGATGGAATACGTTCCACCAGCTGATGCAGTTCTGCTTAAGGTATA-------ATTTA---TTTTTA--AAAATTTATTT
ACAGTAG--TAAGAAAGGCACATTCTAGCAACTTCCCGTTCACATTTATACCGATTCCTCATGTTGGTCGTAATAATAGT
ATCATAGCTAATATCATGCATGCCAACTAGCCAATTTTGATAAGATATCATATAATTAAATGAAGAAATAGAGGGTTGAG
TATCATATCATATCATGATACCGTATCATAATAAATGCTATATTACTATGTGTCATGCATGGCAATGAAATATAATATTA
CATGATACTAATATATGATACTATGCATTCGGAAGATAGTATCGTACACTAATATCATATGCATGATACTAGTATATGAT
AGTACTTCCTATTACAACCAGCCCCACA-----------------------------------------------AAAC-
------------------------------------------------------------------------AAGTGAGC
GCCTAACGAGA--ATAAACGGATGCATCCGACAAAAAGAAA---AAAATAAATATTAACGTATAAATGTATTGCC-----
--------------------------------------------TGATTTATTACTGATA-TTTTTGACTTGCTCGATTG
GCAGTGTGTGCTACACAACTGGAGCGACGAGGATTGCGTGAAGATCCTGACAAAATGCAGAGAGGCCATTGCCCAAGGAG
CGAAAG------CAGGGAAGGTGATAATCATCGATGCTGTTGTTGGATCTCCTTCACACTCACAGCAAGTACTTCAAGCT
CAAGTCTTGATGGATATGCAAATGATGATGCTATTCATGAGCAAAGAACGTGAGGAACTCAGCTGGCAAAAGATATTCAT
GGAAGCAGGGTTTAGTCATTACAAAATACAGCCCGTCCTAGGGATGCGATCCATCATCCAACTCTACCCATAGCT-----
-------------------CATATTGC---------ACTATCCATTTTATATATACTTTCCATTTATATATACTTTCCGC
TTCCAAGGTGATACG---TAATAATTATTAAATTTGTGTATTT---CATTCAAAAGATTCAAATGCGACAGCGATATGTA
ATAATTATTAAA-TTTATTATGTACTTCATTCAAAAGTCCGAATTCGACAGCGATATGTAATAG---------TTATGTA
CTTCATTCAAAAGAACGGACAAATATATTTCAACAACAATATCATGTTTAGGACCCTGA---------------------
---------------------------------------AAGGTAGGACCATAAGACTAGAGATGTTTTTGAAGTTAAAA
ATGCATATAATAGTTCGTTTTAGTCACCATTACACTTTCTTCATCATCATATCCATTATTTTCATGCACACTCTTATTAT
GTTCCTCTTCGCCCTCATGGTCTTCATCTTCTTGGTCACTTGAGCCTCTGAGTCTCTCTCATGGACCTTTGTTTCTGGCC
GTGTATGGTCACTCCAGGTGGATACATAGCCAACAACTCTGTTTTTATC---TCTCTGTTGGATTGTTCAATGTGCATCA
CGAGCAACTCCTGGTATGAATGTGTACTCCAGGCCGGTTTTCAGTTGATTGATGCAGCCACATTAAGTTCTGGATGCCTC
CAGTGTTCGAAACTTTGAGAAGGTTGTGATCTTTTTAATATCGCTTTCTAGTTATTTTTCTTTGTTGTCAAATTTTGGGA
CACAAAATTAGTGGGTGCTTATTTGGTGTTGGTACTCTTTCGTATAAATTTGGTCCAACCATTAGACACAAAACTGCCTT
TCATTGCTCATTAGCAATTTCGCAGAGAAAGAAAGAGGCACATCATGTGTGAGCCATGAACATGAGGTACCACATGACAG
GATCTCAGGTAATCCAGTGCAACATCGGAACACTGTTGTTATGTCCAGTGCAACATCATATAAAGATACAACATAATGTT
ACAGAATGAATCTTACATTCACGTTATGCAGATCATATATGCAATTGTGTATAACACCCTCATTG
>chr2B_234
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-------------------------------------------------------------------------AAGCATG
CACATGCTGCCAAAAGATCGAGCCCCTAGAGTTCCTGCCTACAAAGTCTGCAGATACGGCCGACCACGCATCACACGGCA
ACTCATCCTCGGTCACCGAGTACTTCATCATCGTGCTTTACTCTAGAAAACAACAAGAAGTTCCAGGAAAAAAGCTCAAT
--AATTTGACCGAACACCTGCCGGACATGGTGTGTCCGTCATGGACATCATCGGCAGAGGGGCAAAGGGTACCTGGCTGC
GAAGGGATCCTGTGTGGGAGGTGATGATGTACTCCCTGGCTGCGAAGG--------------------------------
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-------------------------------------------------------GTAGTCCAAGGAGGGCACGCACATT
GGTGGGGTTGCGGATGTCCTATGATGCCTGGGCGGCGGCCGGAGATGTACATCTA---CGGCGTCGGATGAGGAGGGTGC
ATATGCAAAGCAAGGG-AAAGGAGGGGTGGATTGAAAGAAAAGTGGGTCGGGAGGGGATTTGAGTGGGCCTGGGGTGTTG
GAGTCCTACGTGGCGGCGGTCTGGACTGCGGCAAAGCCCCTCTCTCCCCACAAATTGCCTCCGGTTTGTTGAGTATCGTG
TTTGATGGTAAAATGGGTCTAGACGGTTTGAGGGTCGACATTGGAGATGCCGTTATGAGTGGATACCCTTATTTATTTTG
ATTTGAAGACATTAAACATGGCATGGTACCAGGTCCTCTCCTCGAACCACGTGCACAGTTGCTGTTATCGGACGGTTCGG
ACCTATAAATCATCCCTAGTTGAGATTTGATTCTCAGACCACACTAGTATTACTCAAACTCGAAGT-AAGATCATAATAG
C-------------------------------------------------------------------------------
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-----------------------------------------------------------------------AGAAGAAAG
CAGAGCCAAAATGGCCAACACCTCAAGCGCTGAGCTTCTGCAAGCTGAGGCAGAGCTTGTGCGCCACTCCTTAGGCTACC
TCAAGTCCATGGCGTTGCACAGCGCGGTAAAGCTTGGAATCCCCGATGCTCTCCACCGCTGCGGTGGCGCGGCCTCTTTG
CCCGACCTGTTATCCACCCTTGCCCTCCCTTGTAGCAAACGACCATACCTGTCTCGGCTCATGAAGATGCTAGCCGTGGA
AGGAATCTTCACGGCTGTGGCTGTT------GATGTTCCTGCCGCTGGCGAGGGCGT---------CGCCACTGTGCCGA
GCGTCCGGTACGGCCTCAGCCCGGTGTCTCGCCTTCTCGTCAGCGGCA---GCGGCGCGTGCCTGTCCCCGTGCATGCTC
ATGGGCACCTCGCCGCTGTTTCTGGAGGCTTCTCTCCGACTGCCCCAGTGGTTTCAGAGGGACGGCGA------GGGTG-
--AGC------CGGCGTTCGCCATGGCGCACGGCGAGAGCCCCTACGGCGCCGCTGGCCATGACATGGAGTTCAACGCGC
TGGTGAACGAGGCGATGGGGTCCGACAGCCGATACATGGCGGAGCTCGTCGTCCGCGATTGCGGCGAGGTGTTCACGGGC
CTAACGTCTCTGGTCGACGTCGGCGGCGGGAACGGCACCATGGCGACGGCCATCGCCAAGGCCTTCCCGCATGTCAGGTG
TTCGGTGTTGGACCTCCCACATGTTATACAAGGC---GTC---TCAGCACATGAGTCGGTTGAGTTTGCTGCCGGCGACA
TGATGGAATACGTTCCACCAGCTGATGCAGTTCTGCTTAAGGTACA-------ATTTACTG--TATATTAAAATTTATTT
ACAGTACT-TAAGAAAGACACATTCT----ACTTCCAGTTCCCATTTTTCATTATCTAAAATAGTATATGTTTACTACTG
TACTATTAAACCATTGTACG------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TACTCCTATATGGC
ACTACTTTCAATTTCAAATACAGATATAACCGTACCACCACTGCTGTTGATATATATGGACTCATTGGTACTCGGAAAT-
------------------------------------------------------------------------AAGTGAGC
GCATAACAAGA--ATAAACGGGTCGATCCGACAAAAAGAAC---AGAATATACGCGTG----------------------
--------------------------------------GAGTATTGCTATCTTACTGATAGTTTTTGGCT--TTCGATTG
GCAGTGTGTGCTACACAACTGGAGCGACGAGGATTGTGTGAAGATCCTGACAAAATGCAGAGAGGCCATTGCTCAAGGAG
CGAGAG------CAGGGAAGGTGATAATCATCGATGCTGTTGTTGGATCTCCCTCACACTCACAGCAAGTACTTGAAGCT
CAAGTCTTGATGGACATGCAAATGATGATGTTGTTCATGAGCAAAGAACGCGAGGAACTCAACTGGCAAAAGATATTCAT
GGAAGCAGGATTTAGTCATTACAAAATACAGCCTGTCCTAGGAATGCGATCCATCATCCAACTCTACCCATAGCTTATCC
ATGGATAGCCCTT---CCTCATACTGC---------ACTATCCATTTTATATATACTTTCC-----------------GC
TTCCACGGGGATATGTAATAATAATTATTAAATTTATGTATTC---CATTCAAAAGATCCGAATTCGACAAGTATATGTC
ATAATTATTAAA-TTT---ATGTACTTCATTCAAAAGTCTGAAATCGACAGGGATATGTTATAATTAT------------
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>chr2D_234
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-------------------------------------------------------------------------AAGCATG
CACGTGCTGCCAAAAGATCGAGCCCCTAGAGTTCCTGCCTACAAAGTCCGCAGATACGGCCGACCACACATCACGCGACA
ACTCATCGTCGATCACCGAGTACCTCGTCATCGTGCTTTACTCTAGAAAACAAGAAGAAGTTTGACAAAAAAAGCTCAAT
GGAATTTGACCGAACACATGCCGGGCGTGGA--GTCCGCCATGGACATCGTTGGCGGAGGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAGTCCAAGGAGCACACGCGCATT
GGTGGGGTTGTGGACGTCCTATGATGCCTGG-----------------------GCGGCAACGTTAGACGAGGAAGGTGC
ATATGCAAAGCAAGGGGAAAGCAGGGGCGGATTGGAAGAAAAATGGATCG-----GGATTTGAGTGGGCCTGGGGTGTTG
GAGTCCTACGTGGCGGTGGTCCGGACTGCGGCAAAGCCCCCCTCACCCCACAAATTGCCTCCGGTTTGCGGAGTATCATG
TTTGATGACAAAATGGATCTAGACGGTCTGAGGGTCGGCGTTGGAAACGCTCTTATGAGCGGATACCGTGTTTTATTTTG
ATTCGAAGACATTAAACATGGCATGGTACCAGACCCTCTCCTCGTAACACGTGCACCGTTGCTGGTATCGGAA-------
--CTATAAATCATCCCTAGCTGAGATTTGATTCTCAGACCACACCAGT--------------------------------
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-----------------------ATTACTCAAACTCGAAGTAAGATCATA----------------ATAGCAGAAGAAAG
CAGGGCCAAAATGG---CCACCTCAAGAGCGGAGCTTCTGCAAGCTGAGGCAGAGCTGGTGCGCCACTCCTTAGGCTACC
TCAAGTCCATGGCGTTGCACAGCGCGGTGAAGCTTGGAATCCCCGACGCTCTCCACCGCTGCGGCGGCGCCGCCTCTTTG
CCCGACCTGCTATCCACCCTCGCCCTCCCTTGTAGCAAACGGCCATACCTGTCTCGGCTCATGAAGATGCTAGCCGTGGA
AGGGGTCTTCACGGCCGTGGCCGTGGATGTGGATGCTCCTCCCGC---CGCCGGCGAGGGCGCTGCCGGCACCGCGCCGA
GCGTCCGGTACGGCCTCAGCCCGGTGTCGCGCCTCCTCGTCAGCGGCA---GCGGCGCGTGCCTGTCCCCGTGCATGCTC
ATGGGCACCTCGCCGTTGTTTCTGGAGGCTTCTCTCCGGCTGCCCCAGTGGTTCCAGAGGGACGGCGACGGCGAGGGTG-
--AGC------CGGCGTTCGCCATGGCGCACGGCGAGAGCCCCTACGGCGCAGCTGGCCATGACATGGAGTTCAACGCGC
TGGTGAATGAGGCGATGGGGTCTGACAGCCAGTTTATGGCGGAGCTCGTCGTCCGCGAGTGCGGCGAGGTGTTCACGGGC
GTGACGTCGCTGGTCGACGTCGGCGGCGGGAACGGCACCATGGCGACGGCCATCGCCAAGGCCTTCCCGCATGTCAGGTG
TTCGGTGCTGGACCTCCCACATGTTATACAAGGC---GTC---TCAGCACACGAGTCGGTTGAGTTTGCTGCCGGCGACA
TGATGGAATACGTTCCACCAGCTGATGCAGTTCTGCTTAAGGTATA-------ATTTA---TTT---TTAAAATTTATTG
ACAGTAGT-TAAGAAAGACAC---------ACTTCCTGTTCACACTTATACCAATTCCTCA-------------------
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--------------------------CA-----------------------------------------------AAAC-
------------------------------------------------------------------------AAGTGAGC
GGTTAACAAGA--ATAAACGGGTGCATCCGACAAAAAGAAA---AAA---TATATTGACGTATAGATGTATTGCT-----
--------------------------------------------TAGTCTCTTAGTGATAGTTTTTGACTTGTGGGATTG
GCAGTGTGTGCTACACAACTGGAGCGACGAGGATTGTGTGAAGATCCTGACAAAATGCAGAGAGGCCATTGCCCAAGGAG
CGAAAGCAGGGGCAGGGAAGGTGATAATCATCGATGCTGTTGTTGGATCTCCCACACACTCACAGCAAGTACTTGAAGCC
CAAGTCTTGATGGATATGCAAATGATGATGCTGTTCATGAGCAAAGAACGCGAGGAACTGAACTGGCAAAAGATATTCAT
AGAAGCAGGATTTAGTCATTACAAAATACAGCCTATCCTAGGAATGCGATCCATCATCGAGCTCTACCCATAGCTTATCC
ATGGATAGTCCTTTTCCCTCATATATATATTGCAGTACTATCCATTT----TATACTTTCC-----------------GC
TTCCACGGGGATACGTAATAAT---TGTTAAATTTATGTATTT---CATTCAAAAGATCCAAACTCAATAGGGATATGTA
ATAATTATTAAATTT----ATGTACTTCACTCAAAAGTCCGAATTCGAAAGGGATATGTAATAATTAATAGATTTATGTA
CTTCATTCAAAAGAACGGACAA-TATATTTCAACAACAATATCAATGCTACACTGGTGCTTGAGGAACTTGATTGTCC--
----TAGCTATTGACCCTTTGGATCTCGGCCT------------------------------------------------
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-----------CTCCAGGTGGATACATAGCCAACAACTCTGCTTTTATTATTTCTCTGTTGGATTGTTCAATGTGCATCA
CGAGCAACTCC------------------------GGTTTTCAGTTGACTGATGCAACCACATTAAGTTCTGGATGCCTC
CAGTGTTCGAAACATT----AGGTTGTGATCTTTGTAATATTACTTTCTAGTTTTTTTTCTTTGTTGTCAAATTTTGGGA
CACAAAATCAGTAGGTGCTTATTTGGTGTTGGTACTCTTCCCTATAAATTTGGTCCCTTCATTAGACACAAAACTGCCTT
TCATTGCTCATCAGCAATTTCGCAGAGAAAGAAAGAGGCACG--------------------------------------
--TCTCAGGTAATCCAGTGCAACATCAGAACACTGTTGTTATATCCAGTGTAACATCATAAAGAG-TACAAAATAATGTT
ACAGAATGAATCTTACATTCACGTTATGCAGATCATATATGCAATTGTGTATAACACCCTCATTG
>chr2A_975
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--------------------------------------------------------------------------TAATGG
C-------------------------------------------------------------------------------
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-----------------------------------------------------------------------AGAAGAGAG
CAGAGCCAAAATGGCCACCACCTCAAGCGCGGAGCTTCTGCAAGCTGAGTCAGAGCTGGTGCGCCACTCCCTAGGCTACC
TCAAGTCCATGGCGCTGCACAGCGCGGTGAAGCTTGGGATCCCCGACGCTCTCCACCGCTGCGGCGGCGCGGCCTCGTTG
CCGGACCTGTCCTCCGCCCTCGCCCTCCCCTGCAGCAAACGGCCATACCTGTCCCGGCTCATGAAGATGCTAGCCGTGGA
AGGAATCTTCACGGCC------------GTGGATGTTCCCGCCGCCGGCGAGGGCGAGGGC---GCCGCCACCGCGCCGA
GCGTCCGGTACGGCCTCAACCCGGTGTCCCGCCTTCTCGTCGGCGGCG------------GCGTGTCCCCGTGCGTGCTC
ATGGGCACCTCGCCGCTGTTCCTGGAGGCCTCTCTCCGGCTGCCCCAGTGGTTCCAGAGGGACGGCGA------GGGCG-
--AGC------CGGCGTTCGCGATGGCGCACGGCGAGAGCCCCTACGCCACCACCGGCCATGACATGGAGTTCAACGCGC
TGGTGAACGAGGCGATGGGGTCCGACAGCCGCTACATGGCGGAGCTCGTCGTCCGCGAGTGCGGCGAGGTGTTCACGGGC
GTAACGTCGCTGGTCGACGTCGGCGGCGGGAACGGCACCATGGCGGCGGCCATCGCCAAGGCCTTCCCGCATGTCAGGTG
CTCAGTGTTGGACCTCCCGCATGTTATACAAGGCCTCGTC---TCAACGCATGAGTCAGTTGAGTTTGCTGCCGGCGACA
TGATGGAATACGTTCCACCAGCTGATGCAGTTTTGCTTAAGGTACTACGTATAATTTATTTATT---TTCAGATTTATTT
ACAG-----TAAGAAAGACACACTCT----ACTTCCCGTTCGCATTTATACCAATTCCTCA-------------------
--------------------------------------------------------------------------------
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--------------------------AA-----------------------------------------------AAACT
AATTCCTCAAAG-------------------------AATGAAAGGCACGACATGAATTGGCAGATTATGTTATGTGAGC
GCTTAACAAGAATATAAACGAGTGGATCCGACAAAAAGAAA---AGAATAAACGGGTGGAGTAGTGCTTTTTTTTTTTG-
AATAGTTTAGATTGCTTACCACATGTATCACATGGTTAGAGTAGTGCTATCTTATTGATAGTTTTTGACTTGTTGGATTG
ACAGTGTGTGCTACACAACTGGAGCGACCAGGATTGTGTGAAGATCCTGACAAAATGTAAAGAGGCCGTTGCCCAAGGAG
CGAAAG------CAGGGAAGGTGATAATCATCGATGCTGTTGTTGGATCTCCCTCACACTCACAGCAAGTACTTGAAGCT
CAAGTCTTGATGGATATGCAGATGATGATGCTGTTTATGAGCAAAGAACGTGAGGAACTCAACTGGCAAAAGATATTCAC
CGAAGCAGGATTTAGTCATTACAAAATACAGCATGTCCTAGGAATGCGATCCATTATCCAACTCTACCCATAGC------
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-----------------------------------------------------------------
>chr2B_977
ATTTTTAGGACCCTGAAAGATAGGACCATAAGACTAGAGAAGTTTTTTAAGTTAAAAAATGAATATAATAGTTTGTTTTA
GTCACCATTACACTTTCTCCATCATCATATCCATTTTTGTCATGCACACTCTTCCTGTTCGCCCTCATGGTCTTCATCTT
CTTGGTCACTTGAGCCTCTGAGCCTCTCATGTTCCTTCGTTTCTGGCCATGTACAGTCACTCCAGGTGGATACATAGCCA
ACAACTCTGTTTTTATAGTCTCTCTGTTGGATTGTGTACTTCAGGCCGGTTTTCAGTTGATTGATGCAACCACATTAAGT
TCTGGATGCCTCCGGTGTTCGAAACTTTGAGAAGGTTGTGATCTTTGTAATATTGCTTTCTAGTTATTTTTCTTTCTTGT
CAAATTTTGGGATACGAAATTAGTAGGTGCTTATTTGGTGTTGGTACTCTTCCGTATAAATTTGGTCCCATCATTAGACA
CAAAACTGCCTTTCATTGCTTTGATCTTATCAAGTTTCATCACGAAATGGCTCCAAGAAACTGCACTTGAGGCCTTGAGC
AACTCTCAGAAATATCTAAATATCTTTATCTGCTAGTTGAAGATGGAAAATTATTGAAAGGGGATATCACCATGTTGAGT
TCAATTATAAATGTTATTGCATCTACAATGAGGTTGTCTATGAAAAGGAAGATATGCCAACCACATTTTACCTTGTCCCT
GCACGGCATATTTAAGTTCTGTCAAGCTATTGATGGCAATTCAAGAATCATGGAACTTAAGCTATCAATGGAACTTGGTA
CTGATGTCGCTATGGACGGTCCTCTGCCATTTTTTCTTGTTTAGGAATTGATACAAGTAGTACAACACGTAAGAAGTTAT
CACAACAGCCAGCTTAGTCCATATGGTTCCTGCTCCTCGTCACAATTCTCAAGTCATGTTTTGGTGCCACCAGTTTCAAA
AGAGTCTAGTTAGTACAGCTTTTATTTTGGTGCCACGAGATTCAAAAGAGTCAAGTTTTAAGAGCAACTCAACAACCCAA
ACGGACACGCGCGTTGTTCGCTTTTTGTTCGTTTGGGTCGGTAAGACGGACGTGCGTATCCGCTTTTCGTTTTGGGTCGG
CAGGTGCGTCCAATGAAAAGCGTACCCATTTTTTGCCCCGCGTGGTCAAAATAAATTTAGTAAAATATAATTAAACATAA
AGTGGCCGGTCAACACCGGCCAAAGTCGTCTTAAACATTAATTAAACATAAAAAAAGCCCGCGCACCGCCGTAGTCGTCC
GCCTTGCCCTTGCCCTTGCCGTCGTCATTGTCGCCGGCGAGGTCGATGAAGACGGGAGGCGTCCCAGCCCTGTCAACGCG
GCTTGATACGCCGCCAGGGCTGCCTCCTCCGGCGTCTGCTGCAGCCCTGGCAATGCGGCGAGTCACGTGCGCTCTTCCTC
CTCCTTCTTGCAGCGCTCCTCCTCCTCCTCCTCGCGCTCCCTCTGCATGTGCCGCTCGCCGTCACGCGCTCCTCCGCCGG
CCTGCGCTGCCTCCAATGCTAGAGATAGGCGGCCTCTTGCGGCGGCGTCATGCCGAGCCAAGGGGGGCGTTGACCCACTC
CCGCAGCTGGCTAGTCCAGACGTACCGGTCGGCCGGCTCGGGCATAGGCGTCGCAGGGGTGAGTGGTGGCGGTGACGGCG
GCATCACGCAGTCGCCCACTTCAGAGAGGGTGATGGCCTCCGCCAGCCTCGTTTGGTAGTCCGCCTCCGCCTTGAGCCGC
TCCTCCTCGATGAAGGTCTCCAAGGCCGCCGCCAGCACCACCTGGTAGGCAGCCTCCTCCTCCTGCCCCTCCGGCTTGAC
GACTGGGGGCGGCGGGGAGTTGGCATGGTGGTGGTGCACGCCGAGGCGCCGTTGCTCCTCGAGCTCGAGGGAAAACCAGA
CCTCCCAATGGGAGAGTCTGTCGCGTACTCCGGCATACCTCGCTGCTCCGGCGTGAGCAGCGACCGGTGCCTGGGCACCT
CCTCCCAATGCGTGAAGCACGCGGGGGGTGGTGGGGGCCAGATGTGGACGAAAGTGGAAGTGGATGACCAGCCCCCTCCC
CCCGCCCCTGCACGCATGGATTAAAAAAAGGATGCTTTCACTGGCTGATGCGTGGATCCGGTGTCGGTGGCCGCTATTAA
TATAACTGTGTTCGGTCGTTGGCCGGCCGCCATGTGGGACCGCGATGAACACGGGGGGACGCGCGGCGCCTCCACTTCGT
GTTCGCGCCGACGCATTTCGCGCCGGAATTTGAGCCTAAATTGGGTCGGCGCGGAAGCGGACACGTTTTAGGTTTGACTC
CATGCATTAGACCGACGTTTTGATTCACGGCGACTTAAATAAAAATGGAAGGACGAAATGGGTCGCCCGGTTCGAGTTTG
GTCTTATGTTGGACAAGTAACAAAGTCTAGTGCGTTGATCAAAGGGCGCACGGGGATGCTAGGCATATTTAGTTCGATCC
CCATCTGGGGCTTTATTAGTTTATTTTTCTTCCTCGGCTCTAGCGATCAGCGAACAAGAAAAAAGGCTAGCGATCCATGC
GGTGCGGGAGGAGGGTCGAACGACTCGGGAGATGGATCGTGCCCCTAGCGAACCATTCGGATCTGTAGGTGGAAACCAGA
TCGTTGGGAATTTAGCTTCTACCATTACTCAAACTCAAAGTAAGATCATAACACTAATACTAGGTGATAGCAGAAGAAAG
CAGGGCCAAAATGG---CCACCACAAGCGCGGAGCTTCTGCAAGCTGAGGCAGAGCTTGTGCGCCACTCCTTAGGCTACC
TCAAGTCCATGGCGTTGCACAGCGCTGTAAAGCTCGGAATCCCCGACGCTCTCCACCGCTGCGGCGGCGCGGCGTCTTTG
CCCGACCTGCTATCCACCCTTGCCCTCCCCTGTAGCAAACGGCCATACCTGTCCCGGCTCATGAAGATGCTAGCCGTGGA
AGGAATCTTCACGGCTGTGGCTGTGGATGTGGATGCTCCTGCCGCCGGCGAGGGCGAGGGC---GCCGCCACTGCGCCTA
GCGTCCGGTACGGCCTCAACCCGGTGTCTCGCCTTCTCGTCAGCGGCAGTGGCGGCGCGTGCCTGTCCCCGTGCGTGCTC
ATGGGCACCTCGCCGTTGTTTCTGGAGGCCTCTCTCCGGCTGCCCCAGTGGTTCCAGAGGGACGGCGA------GGGCG-
--AGCCGGCGTCGGCGTTCGCGATGGCGCACGGCGAGAGCCCCTACGGCGCCGCTGGCCGTGACATGGAGTTCAACGCGC
TAATAAACGAGGCGATGGGGTCCGACAGCCGATACATGGCGGAGCTCGTCGTCCGCGAATGCGGCGAGGTGTTCACGGGC
ATAACATCGCTGGTCGACGTCGGCGGCGGGAACGGCACCATGGCGACGGCCATCGCCAGGGCGTTCCCGCATGTCAGGTG
TTCGGTGCTGGACCTCCCGCATGTTGTACAGGGCGTCTCAGCAA------ATGAGTCGGTTGAGTTTGCTGCCGGCGACA
TGATGGAATACGTTCCACCAGCTGATGCAGTTCTGCTTAAGGTATG-------ATTTAGTATTT---TTAAAATTTATTT
ACAGTAGTATAAGAAAGACAAATTCT----ACTTCCCGTTCGCATTTATACCAGTTCCTCA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------CA-----------------------------------------------AGAC-
------------------------------------------------------------------------AAGTGAGC
GCTTAATAAG------AATGGGTGGATCCGACAAAAAGAAGAAGAAA---AATGTTGACGTATAAATGTATTGCC-----
--------------------------------------------TATTCTCTTACTGATAGTTTTTAACTTGTTCGATTG
GCAGTGTGTGCTACACAACTGGAGCGACGAGGATTGTGTGAAGATCCTGACAAAATGCAGAGAGGCCATTGCCCAAGGAG
CGAAAGC------AGGGAAGGTGATAATCATCGATGCTGTTGTTGGATCTCCCTCACACTCACAGCAAGTACTTGAAGCT
CAAGTCTTGATGGACATGCAAATGATGATGTTGTTCATGAGCAAAGAACGCGAGGAACTCAACTGGCAAAAGATATTCAT
GGAAGCAGGATTTAGTCATTACAAAATACAGCCTTTCCTAGGAATGCGATCCATCATCCAACTCTACCCATAGCTTATCC
ATGGATAGCCCTTTTTCCTCATATTGC---------GCTATCCATTTTATA----CTTTCC-----------------GC
TCCCAC-GGGATACTTAATAAT---TGTTAAATTTATGTATTTATTCATTCAAAAGATCCAAATTCGACAGGGATATGTA
ATAATTATTAAATTTT---ATGTACTTCATTCAAAAATCCGAATTCGACACGGATGTGTAATAGTTATTAAATTTATGTA
CTTCATTCAAAAGAACGGACAG-CATATTTCAACAAGAATATCAATGCTACATTGGTGCTCTAGGAACTTGATTGTCCTA
ATCTTAGCTTTTGACCCTTTGGATCTCAGCTACAATTTTAAGGTAGGGCCATAAGACTA-AGAAGTTTTTTAAGTTAAAA
ATACATGTAATAGTTTGTTTTAGTCACCATTAAACTTTCTCCATCATCATATCCATTTTTGTCATGCACTTTC-------
-TTCCTCTTCGCCATCATGGTCTTCATCTTCTTGGTCACTTGTGCCTCTGAGTCTCTCTCATGTACCTTTGTTTCTG---
-----------------------------T-----------TTTTAGTC---TCTCTGTTGGATTGTTCAATGTGAATCA
GGAGCAACTCCTGGTATGAATGTGTACTCCGGGCCGGTTTTCAGTTGATTGATGAAACCACATTATATTCTGGATGCCTC
CAGTATTCGAAACTTTGAAAAGGTTGTGATCTTTGTAAT-------------TATTTTTCGTTGTTGTCAAATTTTGGGA
CACAAAATTAGTAAGTGCTTATTTGGTGTTGGTACTCTTTCGTATAAATTTTGTCCCATCATTAGACACAAAACTGCCTT
TCATTGCTCATTAGCAATTGCGCAGAGAAAGAAAGAGGCGCATCATGTGTGAGCAATGAACATGAGGTACCACATGACAG
GATCTCAGGCAATCCAGTGCAACATCAGAACACTGTTGTTATATCCAGTGCAACATCATAAAGAG-TACAAAATAATGTT
ACAGAATGAATCTTACATTCACGTTATGCAGATCATATATGCAATTGTGTATAGCACCCTCATTG
>chr2D_979
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------------------------------------------------------------------------------AG
A-------------------------------------------------------------------------------
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-----------------------------------------------------------------------AGAAGAAAG
CAGAGCCAAAATGG---CCACCTCAAGCGCGGAGCTTCTGCAAGCTGAGGCAGAGCTCGTGCGCCACTCCCTAGGCTACC
TCAAGTCCATGGCGTTGCACAGCGCGGTGAAGCTTGGAATCCCCGACGCTCTCCACCGCTGCGGCGGCGCCGCCTCTTTG
CCCGACCTGCTATCCACCCTTGCCCTCCCCTGCAGCAAACGGCCGTACCTGTCCCGGCTCATGAAGATGCTAGCCGTGGA
AGGAATCTTCACGGCTGTGGCAGCC---GTGGACGTTCCTGCCGCCGGCGAGGGCGAGGGC---GCCGCCGCCGCGCCGA
GCGTCCGGTACGGCCTCAACCCGGTGTCCCGCCTTCTCGTCAGCGGCG------------GCGTGTCCCCGTGCGTGCTC
ATGGGCACCTCGCCGCTGTTCCTGGAGGCCTCTCTCCGGCTGCCCCAGTGGTTCCAGAGGGACAGCGA------GGGCG-
--AGC------CGGCGTTCGCGATGGCGCACGGCGAGAGCCCCTACGCCGCCACCGGCCATGACATGGAGTTCAACGCGC
TGGTGAACGAGGCGATGGGGTCCGACAGCCGGTACATGGCGGAGCTCGTCGTCCGCGAGTGCGGCGAGGTGTTCACGGGC
GTGACGTCGCTGGTGGACGTCGGCGGCGGGAACGGCACCATGGCGACGGCCATCGCCAAGGCCTTCCCGCATGTCAGGTG
TTCCGTGCTGGACCTCCCACATGTTGTACAGGGCGTCGTC---TCGACACATGAATCGGTTGAGTTTGCTGCCGGCGACA
TGATGGAATACGTTCCACCAGCTGATGCAGTTCTGCTTAAGGTATA-------ATTTA---TTTATTTTTAAATTTATTT
ACAGTAG--TAAGAAAGACACATTCT----ACTTCCCGTTCGCATTTATACCAATTCCTCA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------CA-----------------------------------------------AAACT
AATTCTTCAAAGAAAAACTTGGGCAACTATACTACATAATGAAAGGCACGACATGAATTGGCAGATTATGTTATGTGGGC
GCTTAACAAGAATATAAATGGGTGGATCCGACAAAAAGAAA---AGAATAAACGGGTGGAGTAGTGCTATTTTTCTTCTA
AATTGTTTGGATTGCTTACCACATGTGTTACGTGGTTGGAGTAGTGCTATCTTACTGATAGTTTTTGACTTGTGGGATTG
GCAGTGTGTGCTACACAACTGGAGCGACGAGGATTGTGTGAAGATCCTGACAAAATGCAGAGAGGCCATTGCCCAAGGAG
CGAAAGCAGGGGCAGGGAAGGTGATAATCATCGATGCTGTTGTTGGATCTCCCACACACTCACAGCAAGTACTTGAAGCC
CAAGTCTTGATGGATATGCAAATGATGATGCTGTTCATGAGCAAAGAACGCGAGGAACTGAACTGGCAAAAGATATTCAT
AGAAGCAGGATTTAGTCATTACAAAATACAGCCTATCCTAGGAATGCGATCCATCATCGAGCTCTACCCATAGCTTATCC
ATGGATAGTCCTTTTCCCTCATATTGC---------ACTATCCATTTTATATATACCTTCC-----------------GC
TTCCACGGGGATACGCAATAAT---TGTTAAATTTATGTATTT---CACTCAAACAATCCAAATTCAACAGGGATATGTA
ATAATTATTAAATTTT--TATGTAATTTATTCAAAAGTCTGAATTCGACAGGGATATGTGATAATTAATAAATTTATGTA
CTTCATTCAAAAGAACGGACAA-TATATTTCAACAACAATATCAATGCTATATTGGTGCTCGACGAACTTAATTGTCC--
----TAGCTATTGACCCTTTGGATCTCGGCTACAATTTTTAGG---------AAGACTAGAGAAGTTTTTTAAGTTAAAA
ATGCATATAATAGTTTGTTTTAGTCACCATTACACTTTCTCCATCATCATATCCATTTTTGTCATGCACACTC-------
-TTCCTCTTCGCCCTCATGGTCTTCATCTTCTTGGTCACTTGAGCCTCTGAGCCTCTCTCATGTACCTTTGTTTCTGGCC
ATGTACGGTCACTCCAGGTGGATACAATTT-----------TTATAGTC---TCTCTGTTGGAT----------------
--------------------TGTGTACTCCAGGCCGGTTTTCAGTTGATTGATGCAACCACATTAATTTCTGGATGCCTC
TGGTGTTCGAAACTTTGAGAAGGTTGTGATCTTTGTAATATTGCTTTCTAGTTATTTTTCTTTCTTGTCAAATTTTGGGA
CACAAAATTAGTAGGTGCTTATTTGGTGTTGGTACTCTTCCGTATAGATTTGGTCCCATCATTAGACACAAAACTGCCTT
TCATTGCT------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------
>SNPs
SS--SS-S-SSS-SS--SSSSSSSSSS---S-SSSSS-SS-S-SSS--SS--SSSSS-S-S--S-SSS-SSS--SSSSSS
-SSSSSS-SSS-S--SS-SS-SSSSSS--S-SSS--SSSSS-SS-SS--SS-SSS-S-SSS-SSS--SSS--SSSSSSSS
S-----SSSSSSS-SSSS--SSSS--SS-SS-SSSSS-SS--SS-SS-SS-SSS-SSSSS-S----SSSS-SS-------
---S--------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
------------S----S-----SS-------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------S-------
-------------------------S-----S-------------------S-S--------S-----------------
------------------------S-------------------------S--------------S------S-------
-----------------------------------------------S---------S----------------------
--------------------S-----------------------------------------------------------
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--------------------------------------------------------------S---S-------------
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----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
----------------------------------------S-----S---S-----------------------------
-------------------------------------S-----------------------------S------------
--------------------------------S----------S----------------------S------------S
SS-------------------------------------------------S-------------S--------------
--------------------------------S-----------------------------------------------
----------------S-----------------------------------------------------------S---
-----------------------------------------SS-------------------------------------
----------------------------------------------------------------S---------------
-----------------S--------SSSS----------------------S---------SS-SSSS--SSSSSSSSS
SS-SSSSSS-SS--SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----SS------SS
-S-----S-S---S---SS-SSSSS-------------------------------------------------------
--------------------------------------------------------------------------------
--S----S-------------S----------------------------------S-----------------------
----------------------------------------------S-S-S---------------------S-------
------------------------------------S-------------------------------------------
----------------------------------------------------S---------------------S-----
--------------------------------S----------------------------S------------------
---------S-----------------------S--------S-------------------------------------
-------------------------------------------------------------SSSSSSSSSSSSSSSSS--
-----S--S--------------------------S----------------------S-----S------S--------
----------------SS---------------------------------S----------------------------
----------------------S---------------------SSSS--SSSSSS--S---------------------
-----------------------------------------------S---------------S------S---------
---------------S------------------------S----------------S--S------------SSSSSSS
S--------------------------------------------------------------S----------------
S----S--------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
----------------------------------S------S--------------------------------------
------------S-------------------------------------------S-S---------------------
------------------------------------------------------S-------------------------
--------------------------S---------------S-----------------S-S--S-----S--------
-----------------------------------------------------------------
>forward_1033
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-----------------------------------------------------GGGGATTTGAGTTGGCCTGA-------
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>reverse_3942
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---------------------CCCCACAAAACAAGTGAGCG---------------------------------------
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-----------------------------------------------------------------
>forward_3713
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-------------TCATGCATGCCAACTAGCCA-----------------------------------------------
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-----------------------------------------------------------------
>reverse_5040
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-------------------------------------------------------------------------------T
GTTCCTCTTCGCCCTCATG-------------------------------------------------------------
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-----------------------------------------------------------------
