>input_sequence_47507
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-----------------------------------------ATGTTATGTTATATTCCAGGTAGCAAGAAGAGAGGGCAC
AACATTATGCTAATAGGTATGCTAA-TTTTTTGGCCA------------------ATTATATATCAGTAGCTCACTAATA
---------------AAATAGGAACTT---------------------AAAATTTTATCTATCTGTAGTCATTGAAAATT
GATTCTAAAATCAAAATCTGAAACAGGTAGTTCTTAGCTTGTGCATAATAACGAGACTGAGAAATTTATGGAATTTAGCT
TCTTGCTACTTTCGCCACAATTTACTATTGCA-AAAGAGAAATTTAAACTACTGATGGCCTGGAAATCCTTATGACTGTA
TT------------------------ATAACATATGCTTCCATCTCAGGTATGACATCAGCAGCTGCAACCTTTCTCTTT
GCATGTATCTATGTGTTCATATGGTATAGAAAGGGGAAGAGATTATGGTTTCTCCTTTCCAAGAAGACTAGCAGCAACAC
TGAAAAGAATTACGAGGCCATGATAGTGTCATATGGATCGCTAGCTCCAAAAAGATACATGTACTCAGAGATAATGAAGA
TAACGTCTTCTCAAAATGATCTGCTTGGAAAAGGAGGTTATGGTGTCGTTTTCAAAGGAAGACTATATGATGGTCGTCGG
GTTGCTGTGAAGTTCTTGCATGACTGCAAAGGAAACGGGGATGAGTTTGTGAATGAAGTTATGAGAATTGGAAGGACCTC
TCATGTTAATGTTGTTAGTTTATTTGGGTTTTGTTTGGAGAGGTCAAAACGTGCTCTTATATATGAGTACATGCCCAATG
GTT-CCTTGGATAAGTACATTTACTCAGAGAAACCCAAAGAAATTTTGGGATGGGAGAGGCTATATGCGATAGCAATCGG
CATTGCTCGTGGCCTCGAATACTTGCACCATAGCTGTAATACACGTATCGTCCACTTCGATATCAAGCCCCAAAATATCC
TTCTAGACAAAGATTTTAGCCCGAAGATTGCTGATTTTGGTCTAGCTAAATTGTGTCATACAAAGGAGAGCAAGCTTTCA
GTGACTGGAGTTAGAGGAACAATTGGATTCATCGCCCCAGAAGTTCACTATCGAACCTTCGGGGTGGTTTCAACAAAGTC
AGATGTTTATAGTTATGGAATGATGCTACTGGAGATGGTTGGAGGTAGGAGAAATGTAAAATCAATTGTTGCAAAATCTA
GCGAAAAGTATTTTCCAGATTGGATTTACGACCACTTTGCACAAGATGAGGGATTGCAAGCATGTGAAATTACAATGGAA
ATTGAGGAGATCGCGAGAAAGATGATCATAATAGGTTTGTGGTGCATACAAGTGTTACCTATGTATCGCCCTACTATAAC
GAAAGTTCTAGAAATGTTTGAGAGAAGCTTAGATGATCTGGAGATGCCACCGAAGCAGAACTTCTGTGAACTATTGTAAG
ATATTTATCCCATATTTTTATTCCTTTGTTTTCCTATGTCATTATCTAGTGCAATAATAAATTG-CATGCACGCTTATCT
CTCATTACAGTGAAAACTCAGCTCACAATTTGGATGTACAAAGTTCAAGTTCTGCTAAACCTGAAGAGATCAGCCTTGTG
AAATCAGAAATCCTACAACAATCGCCAACTCAATGA--------------------------------------------
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--------
>chr3D_1_TraesCS3D01G049100
AGCTTCAGGCTGACTATCTCCGGTGAAGGAGGCGGCCACCACCGCCATGCCCAGGGCCGGAGCCCCCGACGTTCTCATGA
TGCGGGTCGATCCCAGGGGCAGCCTGCCATTGACAGGACGGTACATGATATCAGCTAGTGCGGCCCGCCCGTAGCCCGAC
TGGATCCAGATCGGGTGCCCTTGCCACCGCCGCTGGACCTGTCGCCGAACACCGCCTGCCCCGCACCACTGTTCTAGATC
TAGCCATCGCGGACCGCCACCGTCCTGACCGAATCGTTGGCCGAGGAGAAACGCCACCACTGCGGCTCCCATGCTTTGCC
TGCGACGCCCCTAGCGGCGCTGGCGAGGGGGGGTGAGCTGGGGTGAACGGGAGACGACCGTTGGGGACGCTCCGGTGCAG
CGGCGCGGCGCCGCACGGGAGCAGGTAGAGTTAGGAGCGGAGGACCGGGTAGGGTCAAAAAATGGGGGCAGTTCAAATAC
ACTATGACTCTATGAGTAATGATTAGTACGATTTCAACATAATGCATGGCAGTGGTCTAGTTCTGTACGATAACTACTCT
TCGGTTTTTTTGAACACCAGTACAGACGCAAGCGCTTATACATACGTGCATACATTCACCCCTATGAACGCACACACGCA
CACCCCCTCGTCGTAGACGGGAACATCTCCTCCCACTGAAAGCGCATCGCCGGAAATCCTAAAAAAAATCCAGGAATAAT
GCGAGCACCAGGATTTGAACCTTGGTGGGCTGAGGATACCACTGTCCCTCTAACCATCCAACCACAAGTCAGTTCACAAC
TACTCTTCGGTTTTGGTGTAGTGAGGATCATGGTGCTACAAGGGAACATTTGCAGAAAA-AAAATTACAGAGCACACACA
CGTTCCTCCTTCAATGTTGCAATGCTCTTTTAGTATTGAATATTCATATGCAATGATCATATCTTTCTTTTCCAAAAAAG
CCCAACGTAGTACTATTGGGTGACACCGCTTTTACTCATAAATGTTATGTTATATTCCAGGTAGCAAGAAGAGAGGGCAC
AACATTATGCTAATAGGTATGCTAA-TTTTTTGGCCA------------------ATTATATATCAGTAGCTCACTAATA
---------------AAATAGGAACTT---------------------AAAATTTTATCTATCTGTAGTCATTGAAAATT
GATTCTAAAATCAAAATCTGAAACAGGTAGTTCTTAGCTTGTGCATAATAACGAGACTGAGAAATTTATGGAATTTAGCT
TCTTGCTACTTTCGCCACAATTTACTATTGCA-AAAGAGAAATTTAAACTACTGATGGCCTGGAAATCCTTATGACTGTA
TT------------------------ATAACATATGCTTCCATCTCAGGTATGACATCAGCAGCTGCAACCTTTCTCTTT
GCATGTATCTATGTGTTCATATGGTATAGAAAGGGGAAGAGATTATGGTTTCTCCTTTCCAAGAAGACTAGCAGCAACAC
TGAAAAGAATTACGAGGCCATGATAGTGTCATATGGATCGCTAGCTCCAAAAAGATACATGTACTCAGAGATAATGAAGA
TAACGTCTTCTCAAAATGATCTGCTTGGAAAAGGAGGTTATGGTGTCGTTTTCAAAGGAAGACTATATGATGGTCGTCGG
GTTGCTGTGAAGTTCTTGCATGACTGCAAAGGAAACGGGGATGAGTTTGTGAATGAAGTTATGAGAATTGGAAGGACCTC
TCATGTTAATGTTGTTAGTTTATTTGGGTTTTGTTTGGAGAGGTCAAAACGTGCTCTTATATATGAGTACATGCCCAATG
GTT-CCTTGGATAAGTACATTTACTCAGAGAAACCCAAAGAAATTTTGGGATGGGAGAGGCTATATGCGATAGCAATCGG
CATTGCTCGTGGCCTCGAATACTTGCACCATAGCTGTAATACACGTATCGTCCACTTCGATATCAAGCCCCAAAATATCC
TTCTAGACAAAGATTTTAGCCCGAAGATTGCTGATTTTGGTCTAGCTAAATTGTGTCATACAAAGGAGAGCAAGCTTTCA
GTGACTGGAGTTAGAGGAACAATTGGATTCATCGCCCCAGAAGTTCACTATCGAACCTTCGGGGTGGTTTCAACAAAGTC
AGATGTTTATAGTTATGGAATGATGCTACTGGAGATGGTTGGAGGTAGGAGAAATGTAAAATCAATTGTTGCAAAATCTA
GCGAAAAGTATTTTCCAGATTGGATTTACGACCACTTTGCACAAGATGAGGGATTGCAAGCATGTGAAATTACAATGGAA
ATTGAGGAGATCGCGAGAAAGATGATCATAATAGGTTTGTGGTGCATACAAGTGTTACCTATGTATCGCCCTACTATAAC
GAAAGTTCTAGAAATGTTTGAGAGAAGCTTAGATGATCTGGAGATGCCACCGAAGCAGAACTTCTGTGAACTATTGTAAG
ATATTTATCCCATATTTTTATTCCTTTGTTTTCCTATGTCATTATCTAGTGCAATAATAAATTG-CATGCACGCTTATCT
CTCATTACAGTGAAAACTCAGCTCACAATTTGGATGTACAAAGTTCAAGTTCTGCTAAACCTGAAGAGATCAGCCTTGTG
AAATCAGAAATCCTACAACAATCGCCAACTCAATGAGCAGATAGGCCTTGTGAATCAAAGAACCTACATCCATTTCCAAC
ACTGATAGAAGGTGG-CATGT--TACTGTACATTCAGAAATTGAATAATTCCAGCGAAATTCAGCATTGTACTTGTAGTA
GA----ATATATTCCATGTATGCATGCCCTAGAGTCAAGAGCAGCCGTATGACAGCATCCTAAGTTACCGACCACACAAG
AAATACAATTTATTATGATGAGTTTTGTGTTTCAACTGCTAAAAGGCATCACCTGTAGATAAAAGTGTGTTATATCGACT
AGA--GGGGGG--TGAATAGGCGATTTTTATAAATTCTTCACTAAGGAATTTGTGGGTGAGGAAATCCCTTAGCGAAGAA
CTACTTGCAGCGGAATAAGTACTGAAAAGTATGCATAGCAGAACACAAGCATAGTCATCATGATGAAATGAAAACAAGCA
CAGAGTACAGAAAGCGTAAACACAGGATAACACAGGATGAAGACAAACAGACTGAGGAAATTGAACTGAGGAAATTGAGA
AAGTCTTCAGTCAAAGTCTTCAAACACAGATATGAACATGCATACAACACAGTAATGAGGAAATGAAAAAGTTGAGGAAA
TAGAACCAATAGGCTTGGTGAAGACAATGATTTGGTAGACCAGTTCCAACTGCTGTCTCAGTTGTACGTCTGGTTGGAGC
GGC-AGGTATTTAAACCTGAGGACACACAGTCCTCACCATATTCTCCTTGAGCTAAGGTCACACAGACCTCGCCCAATCA
CTCGTGGTAAGTCTTCAGGTGACGTCCAAACCTTCACAAACTCGGTCACTTGGCGATCCACAATTTCGTCTTGGATGCTC
TAGACCATGACGCCTAACCGTCTGGAAGAAGCACAGTCTTCAAAGGTAACAAGCGTGGGATCCACGCAGGATCAATCTCT
TCAGTGATGCTCAATCACTTTGGGTTTGTAGGTGTTTGGGTTTGGGGTTTTCCTCACTTGACGATTTTCGCTCAAAGTCC
TCGAAGGA
>chr3A_798
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------AAG
TACTCTTCGGTTTTGGTGCAGTGAGGATCATGCTGGTATAACGG-ACATTTGCAGAAAA-----TAACAAAGCACGCACA
CGTTCCTGCTTGAATGTTGCAATGTTCTTTTAATATTGAATATCGATATGTAATGATTATCTCTT-CTTTTCGACAAAAG
ACCAACGTAGTACTATTGGGTGACACTGTTTTTATACATAAATGTTATGTTATATTCCAGGTAGCAAGAAGCGATGGCAC
AAGATTATGCTAATAGGTATGCTAA-TTTTT-GGCCA------------------TTTATATATCAGTAGCTCCCTAATA
GTGATTATCTATAATAAATAGGAACTT---------------------GAAAAGTTATCTGTCTATAGTCATTGAAAATT
GATTGTAAAAAAAACT--TGAAACAAGCAGCTCTAAGCTTGTGCATAATAACGAGACCGGTCAATTTATGGTATTTAGCT
TGTTGCTACTTTTGCCACCATGTACTCTTGCAGAAAGAGATATGTAAACTATTGATGGCCTAGAAATCATTATGACTGTA
TTATAACTTCGGGTTTACAGAAGGAAATAACATATGCTTCCATCTCAGGTATGACATCAGCAGCTGCAACCTTTCTCTTT
GCATGTCTTTATGCGCTGATATGGTATAGAAAGGGGAAGAGGTTATGGTTTCTCCTTTCCGAGACGACTAAAAGCAACAC
TGAAAAGAATTATGAGGCCATGATAGCGTCCTATGGATCCCTAGCTCCGAAAAGATACATGTACTCAGAGATAATGAAGA
TAATGTCTTCTCACGATGACCAGCTTGGAAAAGGAGGTTTCGGTGTCGTTTTCAAAGGAAGACTACACGATGGTCGTCTG
GTTGCTGTTAAATTCTTGCATGACTGCAAAGGAAACGGGGATGAGTTTGTGAATGAAGTTATGAGCATTGGAAGGACCTC
TCATGTTAATGTTGTTAGTCTATTTGGGTTTTGTTTGGAGGGATCAAAACGTGCTCTTATATATGAGTACATGCCCAACG
GTT-CCTTGGATAAGTACATTTATTCAGAGAAGTCCAAAGAAATTTTAGGATGGGAGAGGCTCTATGCGATAGCAATTGG
GATTGCTCGTGGCCTCGAATACTTGCATCATAGTTGTAATACACGTATCGTCCATTTTGATATCAAGCCCCAAAATATCC
TTCTAGACAAAGATTTTAGCCCGAAGATTGCTGATTTTGGTCTAGCTAAATTGTGTCATACAAAGGAGAGCAAGCTTTCA
ATGACTGGAGCTAGAGGAACAATTGGATTTATCGCTCCAGAAGTTCACTATCGGACCTTCGGGGTGGTTTCAACAAAGTC
GGATGTTTATAGTTATGGAATGATGCTGCTGGAGATGGTTGGAGGTAGGAGAAACGTAAAATCAATTGTTGCAAAATCCA
GTGAAAAGTATTTTCCAGATTGGATTTATGACCACTTTGCGCAAGATGAGGGATTACAAGCATGTGAAGTTACAAGAGAA
ATTGAGGAGATCACGAGAAAGATGATCATAATAGGCTTGTGGTGCATACAAGTGTTACCTATGTATCGACCTACTATAAC
--AAGTTCTAGAAATGTTTGAGAGAAGGTTAGATGATCTGGACATGCCGCCGAAGCAGAACTTCTGTGAACTACTGTAAG
ATATTTCTCCCATATCTTTATTCCTTTGTTTTCCTAGGTGATTAGTTTCTGCAATAATAACTTG-ACTACCCGCTTATGT
CTCATTACAGTGAAAGCTCAGCTCAGAATTTGGATGTAAAAAGTTCATGTTCTACCAAACCTGAAGAGATCAGCCTTGTG
AATTCAAAAATCCTACAACAATCGCCAACTCTTTGAGCAGATAGGCCATGTGAATCAAAGAACCTACGTTCATCTCCAAC
ACTGTGAGAAGTTGG-CCTGTACTACTGTACATTCAGAAATTGAAT--------------TCGGCATTGTACTTGTAGTA
GG----ATATATTCCATATATGCATGACCTAGAGTCAAGAGCAGCCGCATGATAGCATCCTAAGTTACCAACCACGGAAG
GAATACAATTTATTCTGATGACTTTTGTGTTACAACTGCTAAAATGCATC------------------------------
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--------
>chr3B_846
--------------------------------------------------------------------------------
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---------------------------------------------ACACTTGCAGAAAATAAAATAACAGAGCACACACA
CGTTCCTCCTTGAATGTTTCAATGCTCTTTAAGTATTGAATATTCATATGCAATGATTATCTCTTTCTTTTCCAAAAAAG
ACCAACGTAGTACTACTGGGTGACACCGTTTTTACTCATAAATGTTATGTTATATTCCAGGTAGCAAGAAGAGAGGGCAC
AACTTTATGCTAATAGGTATGCTCATTTTTT-GGCCA------------------TTTATATATCAGTAGCTCACTAATA
---------------AAATAGGAACTT---------------------CAAAATTTATCTACCTATAGTCATTGAAAATT
GATTGTAAAATAAAAATCTGAAACAAGTAGCTCTAAGCTTGTGCATAATAATGAGACCGGTAAATTTATGGCATTTAGCT
TGTTGCTACTTTCGCCACAATGTACTATTGCA-AAGGAGAAGTTTGAACTATTGATGGCCAGGAAATCATTATGACTGTA
TTAC------------------------AATATATGCTTCCATCTCAGGTATGACATCAGGAGCTACAACCTTTCTCTTT
GCTTGTCTTTATGTGTTGATATGGTATAGGAAGGGGAAGAGATTATGGTTTCTCCTTTCCAAGAAGACTAGCAGTAACAC
TGAAAAGAATTACGAGGCCATGATAGTGTCATATGGATCGCTAGCTCCAAAAAGATACATGTACTCGGAAATAATGAAGA
TAACGTCTTCTCAAAATGATCAGCTTGGAAAAGGAGGTTATGGTGTCGTTTTCAAAGGAAGACTATAT------------
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>chr3B_888
--------------------------------------------------------------------------------
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--------CTTGAATGTTGCAATGCTCTTTTAGTATTGAATATTCATATGCAATGATTATCTCTTTCTTTTCCAAAAAAG
ACCAACGTAGTACTACTGGGTGACACCGTTTTTACTCATAAATGTTATGTTATATTCCAGGTAGCAAGAAGAGAGGGCAC
AACTTTATGCTAATAGGTATGCTAA-TTTCTTGGCCA------------------TTTATATACCAGTAGCTCACTATTA
---------------AATAAGAACTTC---------------------AAAATCT-------------------------
---------------ATCTGAAACAAGTAGCTCTAAGCTTGTGCGTAATAATGAGACCGGTAAATTTATGGCATTTAGCT
TGTTGCTACTTTCGCCACAATGTACTATTGCA-AAGGAGAAATTTAAACTACTGATGGCCTGGAAATCATTATGACTGTA
TTAC------------------------AATATATGCTTCCATCTCAGGTATGACATCAGGAGCTACAACCTTTCTCTTT
GCTTGTCTTTATGTGTTGATATGGTATAGGAAGGGGAACAGATTATGGTTTCTCCTTTCCAAGAAGACTAGCAGTAACAC
TGAAAAGAATTACGAGGCCATGATAGTGTCATATGGATCGCTAGCTCCAAAACGATACATGTAGTTGGAGATAATGAAGA
TAACGTCCTATCAAAATGATCAGCTTGGAAAAGGAGGTTATGGTGTCGTTTTCAAAGGAAGACTATATGATGGTCGTCTA
GTTGCTGTGAAATTCTTGCATGACTACAAAGGAAACGGGGATGAGTTTGTGAATGAAGTTATGAGCATTGGAAGGACCTC
TCATGTTAATGTTGTTAGTTTATTTGGGTTTTGTTTGGAGAGATCAAAACGTGCTCTTATATATGAGTACATGCCCAATG
GTT-CCTTGGATAAGTACATTTACTCAGAGAACCCCAAAGAAATTTTAGGATGGGAGAGGCTATATGCGATATCAATCGG
TATTGCTCGTGGCCTCGAATACTTGCACCATAGCTGTAATACACGTATTGTCCATTTCGATATCAAGCCCCAAAATATCC
TTCTAGACAAAGATTTTAGCCCGAAGATTGCTGATTTTGGTCTAGCTAAATTGTGTCATACAAAAGAGAGCAAGCTTTCA
GTGACTGGGGTTAGAGGAACAATTGGATTCATCGCCCCAGAAGTTCACTATCGAACCTTCGGGGTGGTTTCAACAAAGTC
AGATGTTTATAGCTATGGAATGATGCTGCTGGAGATGGTTGGAGGTAGGAGAAATGTAAAATCAATTGTTGCAAAATCTA
GCGAAAAGTATTTTCCAGATTGGATTTACGACCACTTTGCACAAGATGAGGGATTGCAAGCATGTGAAATTACAATAGAA
ATTGAGGAGATCGCGAGAAAGATGATCATAATAGGCTTGTGGTGCATACAAGTGTTACCTATGTATCGCCCTACTATAAC
AAAAGTTCTAGAAATGTTTGAGAGAAGCTTAGATGATCTGGAGATGCCGCCGAAGCAGAACTTCTGTGAACTATTGTAAG
ATATTTATCCCATATTTTTATTCCTTTGTTTTACTGTGTCATTATTTAGTGCAATAATAACTTG-CCTGCACACTTATCT
CTCATTACAGTGAAAACTCAGCTCACAATTTGGATGTACAAAGTTCAAGTTCTACTAAACCTGAAGAGATCAGCCTTGTG
AAATCAGAAATCCTACAACAATCGCCTACTCATTGAGCAGATAGGCCTTGTGAATCAAAGAACCAACATTCATTTCCAAC
ACTGTTAGAAGGTGG-CATGTACTACTGTACATTCAGAAATTGAATAATTCCAGCGAAATTTGGTATTGTACTTGTAGTA
GA----ATATATTCCATGTATGCATGACCTAGAGTCAAGAGCAGCCGCATGACAACATCCTAAGTTACCGATCACAGAAG
GAATACAATTTATTCTGATGAGTTTTGTGTTTCAATTGCTAAAAGGCATCAGATGTAGATA-------------------
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>chr3D_943
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---------------------------------------------------------------TTTCTTTTGGAAAAACA
ACCAATGTAGTACTATTCGACAACATTTCTTTTATTCATAAATGTTATGTTATATTCCAGGTAGCAAGAACAAAACGAAG
AAGATTATACTAATAGGTATGCTAAATTTTT-TGCCATCTTTTCATATGTAATGATTTAAATATCAGCAGTTTACTGATA
---------------TATAGTGAATTTCTATGACAAATTAGTAACTTCAAAATTTATTATGTCTGTAATCATTGAAAATT
GA------AATAAAAATCTGAGTCAAGCAACTCCGGGCATGTGCATATTAGCATGACTTATCAATTTATGCCACTTAGCT
TGTTGCTACTTTTGCCACCAAGTACTCTTGCAGAAATAGAAACTTAAACTACTGATGGTCAGAAAGAATA-------GTT
TTATAACTTCTGGTTTGTAAAAGGAAATAACATCTGCTTCCATCTCAGGTATAACATCAGCAGCTGCAACCATTCTCTTT
GCATGTCTTTATGTGCTGATATGGCATGGAAAAGGGCAAGGACTATGGTTTCTCCTTTGC---AAGACTAGCAGCAAAAC
TGAAAAAAAATACGAGGCAATGATAGTGTCGTATGGATCCCTAGCTCCAAAAAGATACATGTACTCAGAGGTAATGAAGA
TAACGTCTTCTCGCAATAATCAGCTTGGAAAAGGTGGTTATGGTGTGGTTTTCAAAGGAAGATTACATGATGGTCGTCTG
GTTGCTGTGAAATTCTTGCATGACTGCAAAGGAAATGGGGACGAGTTTGTGAACGAGGTTATGAGCATTGGAAGGACCTC
TCATGTTAATGTTGTTAGCTTATTTGGGTTTTGTTTGGAGGGATCAAAACGAGCTCTTATATATGAGTACATGCCCAACG
GTT-CCTTGGATAAGTACATTTACTCAGAGAACCCCAAAGAAATTTTAGGATGGGAGAGGCTCTATGCGATAGCACTCGG
GATTGCTCGTGGCCTCGAATACTTGCACCATAGCTGTAATACACGTATCGTCCATTTCGATATCAAGCCCCCAAATATCC
TTCTAGACAAGGATTTTAACCCGAAGATTGCTGATTTTGGTCTAGCTAAATTGTGTCAAACAAAAGAGAGCAAGCTTTCA
ATGACTGGTGCTAGAGGAACAATTGGATTCATCGCTCCAGAAGTTCACTCTCGAACATTTGGAGTGGTTTCAACAAAGTC
AGATGTTTATAGTTATGGAATGATGCTTTTGGAGATGGTTGGAGGCAGGAGAAATGTAAAATCAACTGTTGCAAAATCAA
GCGAAAAGTATTTTCCAGACTAGATTTACGATCACTTTGCACAAGATGATGGACTACAAGCATGTGAAGTGACAAGAGAA
ATTGAGGAGATTGCGAGAAAGATGACATTCATTGGCTTGTGGTGCATACAAGTGTTACCTATGTATCGCCCTACTATAAC
CAAAGTTCTAGAAATGTTCGAGAGAAGCTCAGATGACATGGACATGCCACCGAAGCAAAACTTCTCTGGATTGCTGTAAG
ATATTCTCCCATATTTTTTGTTCCTTTGTTTTTCTGTACAATTATGATAATGTA-AATAACTTGACCTACACGCTTATCT
CTGATTCCAGTGAAAGTTCAGCTCACAATATGGATGTACAAAGTTCAAGTTCTACCAGATCTGAGGAGATCAGCCTTGTG
AATTCAAAAATCGTACAACAATCGCCAACTCTTTGAGCAGAT--GCCTTGTGAATCAAAGAACCTACATTCATTTCCAAC
ACTGTGAGATGGTGGCCCTGTACTAGAGTACATTCAGAAATTGAACAAGCGCAGCGAAATTCGGCA------TTGTAGTA
GA----ACATATTCCATGTA------------------------------------------------------------
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--------
>chr3A_1301
GTCTTAGAA-----------------------------------------------------------------------
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-------------------------------ATCTGCTTCAATCTCAGCTGTGACATCAGCCGCTGGAGCCTTGCTCTTT
ACATGTATTTATGTCTTGGTATGGCGCAAAAAATGGAAAAGACTAAGGTTTCTCCTTTGCAAGAAGACTAGCAGCAACAC
CGAAAAGAATTATGAGGCCATGATAGTATCGCACGGATCCCTAGCTCCAAAAGGATACATGTATTCAGAGGTAATGAAGA
TAACATCTTCTCGCAACGATCAGCTTGGAAAAGGAGGTTATGGTGTTGTTTTCAAAGGAAGACTGCATGATGGTCGTCTG
GTCGCAGTAAAATTCTTGCATGACTGCAAAGGAAATGGGGACGAGTTTGTTAATGAAGTTATGAGCATTGGCAGGACCTC
TCATGTTAATGTTGTTAGCTTATATGGGTTTTGTTTGGAGGGGTCAAAGCGAGCTCTTATATATGAGTACATGCCCAACG
GTT-CCTTGGATAAGTACATTTATTCAGAGCACCCCAAAGAAATTTTAGGATGGGAGAGGCTTTACGGGATAGCTATAGG
GATTGCTCGTGGCCTCGAATACTTGCACCATAGCTGTAATACACGTATCGTCCATTTCGATATCAAGCCCCAAAATATCC
TTCTAGACAAAGATTTTAGCCCAAAGATTGCTGATTTTGGTCTAGCTAAATTGTGTCATACAAAAGAGAGCAAGGTTTCA
ATGACTGGTACTAGAGGAACAATTGGATTCATCGCCCCAGAAGTCCACTCGCGAACCTTTGGAGTGGTTTCAACAAAATC
GGATGTTTATAGTTATGGAATGATGCTTCTAGAAATGGTTGGAGGTAGGAGAAACGTAAAATCAATTGTTGCAAAATCCA
GCGAAAAGTATTTTCCAGACTGGATTTATGAGCACTTTGCACAAGATGATGGATTACAAGCATGTGAAGTCACGAGTGGA
ATTGAGGAAATCGCAAGAAAGATGACATTAATTGGCTTGTGGTGCGTACAAATATTGCCTGCATATCGCCCTACCATAAC
CAAAGTTCTAGAAATGTTTGACAGAAGCTCAGATGACATGGGCATGCCACCGAAGCAAAACTTCTCTGGATTGCTGTAAG
ATATTTCTCCCATATATTTGTCCCTTTGTTTGTCTGTGCAATTATGATTATGC--AATAACTTGACCTACATGCATATCT
CTCATTGCAGTGAAAGTTCAGCTCACAATATGGATGCACAGAGTTCAAGTTCCACCAGATCTGAGGAGATCAGCCTTGTG
AATTCAAAAATCCTACAACAATAGCCAACTCTTTGAACAGATAGGTCGTGTGAATCAAAGAACCTACATTCATTTC-AAC
ACTGTGAGATGGTGGCCCTGTCGTAGAGTACATTCAGAAATTGAACAAGCACAGCAAAATTTGGCAT------TGTAGTA
GAACATATATAGTACATTTATGCATGACA-AGAGTCAAGAGCACCCTCATGACAGCGTCCTAAGTTACAGAGAACAGAAG
GAATGAAATGTATTCTGACAAGTTTTGTGTTCCAACTGCTAAAAGGCATC------------------------------
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--------
>chr3B_1306
ATAG----------------------------------------------------------------------------
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------------------------------CATCTGCTTCCATCTCAGGTATGACATCAGCAGCTGCAACATTTCTATTG
GCATGTCTTTGTGTGCTGATATGGCATAGAAAGGGGAAACGACTATGGTTTCTCCTTTGCAAGAAGACTAGCAGCAACAC
TGAAAAGAATTGCGAGGCCATGATAGTGTTA----GATCACTAGCTCCAACAAGATACACATACTCAGAGGTAATGAAGA
TAACTTCTTCTCACAACAATCAGCTTGGGAAAGGTGGTTATGGTGTGGTTTTCAAAGGAAGACAACATGATGGACGTCTG
GTGGTCGTGAAATTCTTGCATGACTGCAAAGGAAATGGGGACGAGTTTGTGAATGAGGTTATGAGCATTGGCAGGACCTC
TCATGTTAATGTTGTTAGCTTATTTGGGTTTTGCTTGGATGGATCAAAGCGAGCTCTTATATATGAGTACATGCCCAACG
GTTTCGTTGGATAAGTACATTTATTCAGAGCACCCCAAAGAAATTTTAGGGTGGGAGAGGCTTTATGCGATAGCAATTGG
GATTGCTCGTGGCCTCGAATACTTGCACCATAGTTGTAATACACGCATCGTCCATTTCGATATCAAGCCCCAAAATATCC
TTCTAGACAAAGATTTTAACCCAAAGATTGCTGATTTTGGTCTAGCTAAATTGTGTCATACAAAGAAGAGCAAGCTTTCA
ATGATTGGAGCTAGAGGAACAATTGGATTTATCGCCCGAGAAGTTCACTCTCGAACCTTTGGGGTGGTTTCAACAAAGTC
AGATGTTTATAGTTATGGAATGATGCTGCTGGAGATGGTTGGAGGTAGGAGAAACGTAAAATCAATTGTTGCAAAATCCA
GTGAAAAGTATTTTCCAGATTGGATTTATGACCACTTTGCACAAGATGAGGGATTACAAGCATGTGATGTTACAAGAGAA
ATTGAGGAGATCGCGAGAAAGATGATCATAATAGGCTTGTGGTGTATATAAGTGTTACCTATGTATCGACCAACTATAAC
AATAGTTCTAGAAATGTTTGAGAGAAGGTTAGATGATCTGGACATGCCGCCAAAGCAGAACTTCTGTGAACTACTGTAAG
ATATTTCTCCCATATCTTTGTTCCTTTGTTTCCCTATGTGATTATTTTGTGCAATAGTAACTTG-ACTACGCGCTTATCT
CTCATTATAGTGAAAGCTCAACTCACAATTTGGATGTACAATGTTCGAGTTCTACCAAACCTGAAGAGATCAGCCTTGCG
AATTAAAAAATCCTACAACAATAGCCAACTCTTTGAGCAGATAGAACTTGTGCATCAAAGAACCTACATTCATTTCCAAC
ACTGTGAGAAGGTGG-CCTTTACTACTATACATTCAGAAATTGAATCCAA--------------CATTGTACTTTTAGTA
GA----ATATATTCCATGTATGCATGAATTAGACTGAAGAGTAGCCGCATGATAGCATCCTAAGTTATGGACCACAGAAG
GA-TACAATTTATTCCGACGAGTTTTGTGTTTCAACTGCTAAAAGGCATCACATGTAGA---------------------
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>chr3A_1311
--------------------------------------------------------------------------------
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-------------------------------ATCTGCTTCAATCTCAGCTATGACATCAGCAGCTGGAGTCTTGCTCTTT
ACATGTATTTATGTCCTGTTATGGCATAGAAAGGGGAAAAGACTATGGTTTCTCCTTTGCAAGAAGACTAGCAGCAACAC
TGAAAAGAATTACGAGGCCATGATAGTATCATATGGATCCCTAGCTCCAAAAAGATACATGTATTCGGAGGTAATGAAGA
TAACATCTTCTCGCAACAATCAGCTTGGGAAAGGTGGTTATGGTGAGGTTTCCAAAGGAAGGCTACACGATGATCGTCTG
GTTGCTGTGAAATTCTTGCATGACTGCAAAGGAAATGGGGACGAGTTTGTGAATCAGGTTATGAGCATTGGGAGGACCTC
TCATGTTAATATTGTTAGCTTATTTGGATTTTGTCTGGAGGGATCAAAACGAGCTCTTATATATGAGTACATGCCCAACG
G-TTCCTTGGATAAGTTCATTTACTCAGAGAACCCCAAAG-AATTTTAGGATGGGAGAGGCTCTATGCGATAGCAGTGGG
GATTGCTCGTGGCCTCGAGTACTTGCATCATGGCTGTAATATACGCATCGTCCATTTTGACATTAAGCCCCAAAATATCC
TTCTAGACAAGGATTTTAACCCAAAGATTGCTGATTTTGGTCTAGCTAAATTGTGTCATACAAAGGAAAGCAAGCTTTCA
ATGACTGGAGCTAGAGGAACAATTGGGTTCATCGCTCCAGAAGTTCACTCTCGAAGCTTTGGAGTGGTCTCAGAAAAGTC
AGATGTTTATAGTTACGGAATGATGCTGCTGGAGATGGTTGGAGGCAGGAGAAATGTAAAATCAATTGATGCAAAATCCA
GCGAAAAGTATTTTCCAGACTGGATTTACGACCACTTTGCGCAAGATGATGGATTACAAGCATGTGAAGTCACATCAGAA
ATTGAGAAAATTGCAAGAAAGATGACCTTAATTGGCTTGTGGTGCGTACAAATATTGCCTGCATATCGCCCTACCATAAC
CAAAGTTCTAGAAATGTTCGACAGAAGCTCAGATGACATGGACATGCCACCAAAGCAAAACTTCTCAGGATTGCTGTAAG
ATATTCTCCCATATTTTTTGTTCCTTTGTTTTTCTGTGCAACAATGATTATGC--AATAACTTGACCTACACGCATATCT
TTCATTACAGTGAAAGTTCAGCTCACAATATGGATGTACAAAGTTCAAGTTCTAACAAATCTGAGGAGATCAGCCTTGTG
AATTCAAAAATCCTACAAAAATCGCCAGCTCTTTGAGCAGATATGCTATGTGAATCAAAGAACCTACATTAATTTCCAAC
ACTGTGAGAAGATGG-CCTGTACTAGAGTACATTGAGAAATTGAACAAGCGCAGCGAAATTTTGCA------TTGTAGTA
GA----ACATATTCCATGTATGCATGACCTAGAGTCAAGAGCATCCACATGCCAGCGTCCTAA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr3B_1316
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------CTTCAATCTCAGCTGTGACATCAGCAGCTGGAGCCTTGCTCTTT
ACATGTATTTATGTCCTGGTGTGGCGCAAAAAAGGGAAAATACTATGGCTTCTCCTTTGCAAGAAGACCAGCAGGAAAAC
TGAAAAAAATTATGAGGCAATGATAGTTTCGTATGGATCCCTAGCTCCAAAAAGATACATGTACTCAGAGGTAATGAAGA
TAACGTCTTCTCGCAACAATCAGCTTGGAAAAGGTGGTTATGGTGTGGTCTTCAAAGAAAGACTACATGATGGTCGTCTG
GTTGCTGTGAAATTCTTGCATGACTGCAAAGGAAATGGGGATGAGTTTGTGAATGAGGTTATGAGCATTGGAAGGATCTC
GCATGTTAATGTTGTTAGCTTGTGTGGGTTTTGTTTGGAGGGATCAAAACGAGCTCTTATATATGAGTACATGCCCAACG
G-TTCCTTAGATAAGTACATTTACTCAGAGAACCCCAAAGAAATTTTAGCATGGGAGAGGCTCTATGCGATAGCACTCGG
GATTGCTCGTGGCCTCGAATACTTGCACCATAGTTGTAATACAAGTATCGTCCATTTCGATATCAAGCCCCAAAATATCC
TTCTAGACAAGGATTTTAGCCCGAAGATTGCTGATTTTGGTCTAGCTAAATTGTGTTATACAAAGGAGAGCAAGCTTTCA
ATGACTGGTGCTAGAGGAACAATTGGATTCATCGCTCCAGAAGTTCACTCTCGAACATTTGGAGTGGTTTCAACAAAGTC
AGATGTTTATAGTTATGGAATGATGCTTTTGGAGATGGTTGGAGGAAGGAGAAATGTAAAATCAACTGTTGCAAAATCCA
GTGAAAAGTATTTTCCAGACTGGATTTATGATCACTTTGCGCAAGATGATGGATTACAAGCATGTGAAGTCACAAGAGAA
ACTGAGGAAATAGCAAGAAAGATGACATTAATTGGCTTGTGGTGCGTACAGATATTGCCTGCATATCGCCCTACCATAAC
CAAAGTTCTAGAAATGTTCGAGAGAAGCTCAGATGACATGGACATGCCACCGAAGCAAAACTTCTCAGGATTGCTGTAAG
ATATTCTCCCATATTTTTTGTTACTTTGTTATTCTGTGCAATTATGATTATGC--AATAACTTGACCTGCGCGCTTATCT
CTCATGCCAGTGAAAGTTCAGCTCACAATATGGATGTACAAAGTCCAAGTTCTACCAGATCCGAGGAGATCAGCCTTGTG
AATTCAAAAATCCTACAACAATCGCCAACTCTTTGAGCAGATAGGCCATGTGAATCAAAGAACCTACATTCATTTCCAAC
ACTGTGAGAAGATGG-CCTGTACTAGAGTACATTCAGAAATTGAACAAGCGCAGCGAAATTCGGCA------TTGTAGTA
GA----ACATATTCCATGTATGCATGACCTAGAATCAAGAGCATCCACATGCCAGCGTCCGAAGTTACGGACCACAGAAG
GAATAACA-TTAATCTGATGAGTGTTGTGTTCTAACTGCTAAAAGGCATC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr3B_1318
TCCAAT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------CTCAGCTGTGACATCAGTAGCTGGAGCCTTGCTCTTT
ACATGTATTTATGTCTTGGTGTGGCGCAAAAAAGGGAAAATACTATGGCTTCTCCTTTGCAAGAAGACCAGCAGCAAAAC
TGAAAAAAATTACGAGGCAATGATAGTGTCGTATGGATCCCTAGCTCCAAAAAGATACATGTACTCAGAGGTAATGAAGA
TAACGTCTTCTCGCAACAATCAGCTTGGAAAAGGTGGTTATGGTGTGGTCTTCAAAGGAAGACTACATGATGGTCGTCTG
GTTGCTGTGAAATTCTTGCATGACTGCAAAGGAAATGGGGACGAGTTTGTGAATGAGGTTATGAGCATTGGAAGGACCTC
GCATGTTAATGTTGTTAGCTTATGTGGGTTTTGTTTGGATGGATCAAAACGAGCTCTTATATATGAGTACATGCCCAATG
G-TTCCTTGGATAAGTACATTTACTCAGAGAACCCCAAAGAAATTTTAGGATGGGAGAGGCTCTATGCGATAGCACTCGG
GATTGCTCGTGGCCTCGAATACTTGCACCATAGCTGTAATACACGTATCGTCCATTTTGATATCAAGCCCCAAAATATCC
TTCTAGACAAGGATTTTAACCCGAAGATTGCTGATTTTGGTCTAGCTAAATTGTGTCATACAAAGGAGAGCAAGCTTTCA
ATGACTGGTGCTAGAGGAACAATTGGATTCATCGCTCCAGAAGTTCACTCTCGAACATTTGGAGTGGTCTCAACAAAGTC
AGATGTTTATAGTTATGGAATGATGCTTTTGGAGATGGTTGGAGGAAGGAGAAATGTAAAATCAACTGTTGCAAAATCCA
GTGAAAAGTATTTTCCAGACTGGATTTATGATCACTTTGCGCAAGATGATGGATTACAAGCATGTGAAGTCACAGGAGAA
ACTAAAGAAATCGCAAGAAAGATGACATTAATTGGATTGTGGTGTGTACAGATATTACCTGCATATCGTCCTACCATAAC
CAAAGTTCTAGAAATGTTCGAGAGAAGCTCAGATGACATGGACATGCCACCGAAGCAAAACTTCTCCGGATTGCTGTAAG
ATATTCTCCGACATTTTTTGTTACTTTGTTATTCTGTGCAATTATGATTATGC--AATAACTTGACCTGCGCGCTTATCT
CTCATGCCAGTGAAAGTTCAGCTCACAATATGGATGTACAAAGTTCAAGTTCTAACAAATCTGAGGAGATCAGCCTTGTG
AATTCAAAAATCCTACAAAAATCACCAACTCTTTGAGCAGATAGGCCATGTGAATCAAAGAGCATATATTCATTTCCAAC
ACTGTGAGAAGATGG-CCTGTACTAGAGTACATTCAGAAATTGAACAAGCGCAGCGAAATTCGGCA------TTGTAGTA
GA----ACATATTCCATGTATGCATGACCTAGAATCAAGAGCATCCACATGCCAGCGTCTGAAGTTACGGACCACCGAAG
GAATAACATTAATTCTGATG---TTTGTGTTCTAACTGCTAAAAGGCATC------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr3B_1585
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------TATGATGGTCGTCTA
GTTGCTGTGAAATTCTTGCATGACTGCAAAGGAAATGGGGATGAGTTTGTGAATGAAGTTATGAGCATTGGAAGGACCTC
TCATGTTAATGTTGTTAGTTTATTTGGGTTTTGTTTGGAGAGATCAAAACGTGCTCTTATATATGAGTACATGCCCAATG
G-TTCCTTGGATAAGTACATTTACTCAGAGAACCCCAAAGAAATTTTAGAATGGGAGAGGCTATATGCGATAGCTACCGG
TATTGCTCGTGGCATTGAATACTTGCACCATAGCTGTAATACAAGTATCGTCCATTTCAATATCAAGCCCCGAAATATCC
TACTAGACAAAGATTTTAGCCCGAAGATTGCTGATTTTGGCCTAGCTAAATTGTGTCATACAAAGGAGAGCAAGCTTTCA
GTGACTGGAGTTAGAGGAACAATTGGATTCATCGCCCCAGAAGTTCACTATCGAACCTTCGGGGTGGTTTCAACAAAGTC
AGATGTTTATAGCTATGGAATGATGCTGCTGGAGATGTTTGGAGGTAGGAGAAATGTAAAATCAATTGTTGCAAAATCTA
GCGAAAATTATTTTCTAGATTGGATTTACGACCACTTTGCACAAGATGAGGGATTGCAAGCATGTGAAATTACAATAGAA
ATTGAGGAGATCGCGAGAAAGATGATCATAATAGGCTTGTGGTGCGTACAAGTGTTACCTATGTATCGCCCTACTATAAC
AAAAGTTCTAGAAATGTTTGAGAGAAGCTTAGATGATCTGGAGATGCCGCCGAAGCAGAACTTCTGTGAACTATTGTAAG
ATATTTATCCCATATTTTTATTCCTTTGTTTTACT-TGTCATTATTTAGTGCAATGATAACTTG-TCTGCACACTTATCT
CTCATTACAGTGAAAACTCAGCTCACAATTTGGATGTACAAAGTTCAAGTTCTACTAAACCTGAAGAGATCAGCCTTGTG
AAATCAGAAATCCTACAACAATCGCCAACTCATTGAGCAGATAGGCCTTGTGAATCAAAGAACCTACATTCATTTCCAAC
ACTGTTAGAAGGTGG-CATGTACTACTGTACATTCAGAAATTGAATAATTCCAGCGAAATTCGGTATTGTACTTGTAGTA
GA----ATATATTCCATGTATGCATGACCTAGAGTCAAGAGCAACCGCATGACAACATCCTAAGTTACCGACCACAGAAG
TAATACAATTTATTCTGATGAGTTTTGTGTTTCAACTGCTAAAAGGCATCAGATGTAGATA-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------
>chr3D_2852
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------AAAGTGTGTTATATCGACT
AGAG-GGGGGG--TGAATAGGCGATTTTTATAAATTCTTCACTGAGGAATTTGTGGGTGAGGAAATTCCTTAGCGAAGAA
CTACTTGCAGCGGAATAAGTACTCAAAAGTATGCATAGCAGAACACAAGCATAGTCATCATGATGAAATGAAAACAAGCA
CGGAGTACAGAAAGCGTAAACATAGGATAACACAGGATGAAGACAAACAGACTGAGGAAATTGAACTGAGGAAATTGAGA
AAGTCTTCAGTCAAAGTCTTCAAACACAGATATGAACAAGCATACAACACAGTAATGAGGAAATGGAAGAGTTGAGGAAA
TAGAACCAGTAAGCTTGGTGAAGACAATGATTTGGTAGACCAGTTCCAACTGCTGTCTCAGTTGTACGTCTGGTTGGAGC
GGCTAGGTATTTAAACCTGAGGACACACAGTCCTCACCGTATTCTCCTTGAGCTAAGGTCACACAGACCTCGCCCAATCA
CTCGTGGTAAGTCTTCAGATGACTTCCAAACCTTCACAAACTCGGTCACTCGGCGATCCACAATTTCCTCTTGGATGCTC
TAGACCATGACGCCTAACCGTCTGGAAGAAGCACAGTCTTCAAAGGTAACAAGCGTCGGATCCATGCAGGATCAATCTCT
TCAGTGATGCTCAATCACTTTGGGTTTGTAGGTGTTTGGGTTTGGGGTTTTCCTCACTTGATGATTTTCGCTCAAAGTCC
TCGGAGGA
>chr3D_2852
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AAAGTGCGTTATATCGACT
AGA--GGGGGG--TGAATAGGCGATTTTTATAAATTCTTCACTGAGGAATTTGTGGGTGAGGAAATTCCTTAGCGAAGAA
CTACTTGCAGTGGAATAAGTACTCAAAAGTATGCATAGCAGAACACAAGCATAGTCATCATGATGAAATGAAAACAAGTA
TAGAGCACAGAAAGCGTAAACACAGGATAACACAGGATAAAGACAAACAAACTAAGGAAATTGAACTGAGGAAATTGAGA
AAGTCTTCAGTCAAAGTCTTCAAACACAGATATGAACAAGCATATAACACAGTAATGAGGAAATGAAAAAGTTGAGGAAA
TAGAACCAGTAGGCTTGGTGAAGACAATGATTTGATAGACCAGTTCCAACTGCTGTCTCAGTTGTACGTCTGGTTGGAGC
GGCTAGGTATTTAAATCTGAGGACACACAGTCCTCACCGTATTCTCCTTGAGCTAAGGTCACACAGACCTCGCCCAATCA
CTCGTGGTAAGTCTTCAGGTGACTTCCAAACCTTCAGAAACTCGGTCACTCGGCGATCCACAATTTCCTCTTGGATGCTC
TAGACCATGACGCCTAACCGTCTGGAAGAAGCACAGTCTTCAAAGGTAACAAGCGTGGGATCCACGCAGGATCAATCTCT
TCAGTGATGCTCAATCACTTTGGGTTTGTAGGTGTTTGGGTTTGGGGTTTTCCTCACTTGATGATTTTCGCTCAAAGTCC
TCGGAGGA
>chr3D_2852
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AAAGTGCGTTATATCGACT
AGA--GGGGGG--TGAATAGGCGATTTTTATGAATTCTTCACTGAGGAATTTGTGGGTAAGGAAATTCCTTAGCGAAGAA
CTACTTGCAGCGGAATAAGTACTCAAAAGTATGCATAGCAGAACACAAGCATAGTCATCATGATGAAATGAAGATAAGCA
CAGAGTACAGAAAGCGTAAACACAGGATAACACAGGATGAAGACAAACAGACTGAAGAAATTGAACTGAGGAAATTGAGA
AAGTCTCCAGTCAAAGTCTTCAAACACAGATATGAACAAGCATACAACACAGTAATGAGGAAATGAAAGAGTTGAGGAAA
TAGAACCAGTAAGCTTGGTGAAGACAATGATTTGGTAGACCAGTTCCAACTGCTGTCTCAGTTGTACGTCTGGTTGGAGC
GGCTAGGTATTTAAACCTGAGGACACACAGTCCTCACCGTATTCTCCTTGAGCTAAGGTCACACAGACCTCGCCCAATCA
CTCGTGGTAAGTCTTCAGGTGACTTCCAAACCTTCACAAACTCGGTCACTCGGCAATCCACAATTTCCTCTTGGATGCTC
TAGACCATGACGCCTAACCGTCTGAAAGAAGCACAGTCTTCAAAGGTAACAAGCGTCGGATCCACGCAGGATCAATCTCT
TTAGTGATGCTCAATCACTTGGGGTTTGTAGGTGTTTGGGTTTGGG-TTTTCCTCACTTGATGATTTTCGCTCAAAGTCC
TCGGAGGA
>chr4D_2852
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AAAGTGTGTTATATCGACT
AGAGGGGGGGG--TGAATAGGCGATTTTTATGAATTCTTCACTAAGGAATTTGTGGGTGAGGAAATTCTTTAGCGAAGAA
CTACTTGCAGCGGAATAAGCACTCAAAAGTATGCATAGCAGAACACAAGCATAGTCATCATGATGAAATGAAAACAAGCA
CAGAGTACAGAAAGCGTAAACACAGGATAACACAGGATGAAGACAAACAGACTGAGGAAATTGAACTGAGGAAATTGAGA
AAGTCTTCAGTCAAAGTCTTCAAACACAGAAATGAACAAGCATACAACACAGTAATGAGGAAATGGAAGAGTTGAGGAAA
TAGAACCAGTAAGCTTGGTGAAGACAATGATTTGGTAGACCAGTTCCAACTGCTGTCTCAGTTGTACGTCTGGTTGGAGC
GACTAGGTATTTAAACCTGAGGACACACAGTCCTCACCGCATTCTCCTTGAGCTAAGGTCACACAGACCTCGCCCAATCA
CTCGTGGTAAGTCTTCAGGTGACTTCCAAACCTTCACAAACTCGGTCACTCGGCAATCCACAATTTCCTCTTGGATGCTC
TAGACCATGACGCCTAACCGTCTGGAAGAAGCACAGTCTTCAAAGGTAACAAGCGTCGGATCCACGCAGGATCAATCTCT
TCAGTGATGCTCAATCACTTTGGGTTTGTAGGTGTTTGGGTTTGGGGTTTTCCTCACTTGATGACTTTCGCTCAAAGTCC
TCGGAGGA
>chr4D_2852
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AAAGTGCGTTATATCGACT
AGA---GGGGG--TGAATAGGCGATTTTTATGAATTCTTCACTAAGGAATTTGTGGGTGAGGAAATTCCTTAGCGAAGAA
CTACTTGCAGCGGAATAAGTACTCAAAAGTATGCATAGCAGAACACAAGCATAGTCATCATGATGAAATGACAACAAGCA
CAGAGTACAGAAAGCGTAAACACAGGATAACACAGGATGAAGACAAACAGACTGAAGAAATTGAACTGAGGAAATTGAGA
AAGTCTTCCGTCAAAGTCTTCAAACACAGATATGAACAAGCATACAACAAAGTAATGAGGAAATGAAAGAGTTGAGGAAA
TAGAACCAATAGGCTTGGTGAAGACAATGATTTGGTAGACCAGTTCCAACTGCTGTCTCAGTTGTACGTCTGGTTGGAGC
GGCTAGGTATTTAAACCTGAGGACACACAGTCCTCACCGTATTCTCCTTGAACTAAGGTCACACAGACCTCGTCCAATCA
CTCGTGGTAAGTCTTCAGGTGACATCCAAACCTTCACAAACTCGGTCACTCGGTGATCCACAATTTCCTCTTGGATGCTC
TAGACCATGACGCCTAACCGTCTGGAAGAAGCACTGTCTTCAAAGGTAACAAGCGTCGGATCCATGCCGGATCAATCTCT
TCAGTGATGCTCAATCACTTTGGGTTTGTAGGTGTTTGGGTTTGGG-TTTTCCTCACTTGATGATTTTCGCTCAAAGTCC
TCGGAGGA
>chr6D_2852
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------AAAGTGCGTTATATCGACT
AGA--GGGGGG--TGAATAGGCGATTTTTATGAATTCTTCACTGAGGAATTTGTGGGTGAGGAAATTCCTTAGCGAAGAA
CTACTTGCAGCGGAATAAGTACTCAAAAGTATGCATAGCAAAACACAAGCATAGTCATCATGATGAAATGAAGACAAGCA
CAGAGTACAGAAAGCGTAAACACAGGATAACACAGGATGAAGACAAACAGACTGAAGAAGTTGAACTGAGGAAATTGAGA
AAGTCTTCAGTCAAAGTCTTCAAACACAGATATGAACAAGCATACAACACAGTAATGAGGAAATGAAAGAGTTGAGGAAA
TAGAACCAGTTGGCTTGGTGAAGACAATGATTTGGTAGACCAGTTCCAACTGATGTCTCAGTTGTACGTCTGGTTGGAGC
GGCTAGGTATTTAAACCTGAGGACACACAGTCCTCACCGTATTCTCCTTGAGCTAAGGTCACACAGACCTCGCCCAATCA
CTCGTGGTAAGTCTTCAGGTAACTTCCAAACCTTCACAAACTCGGTCACTCGGCGATCCACAATTTCCTCTTGGATGCTC
TAGACCATGACGCCTAACCGTCTGGAAGAAGCACAGTCTTCAAAGGTAACAAGCGTCGGATCCACACAGGATCAATCTCT
TCAGTGATGCTCAATCACTTTGGGTTTGTAGGTGTTTGGGTTTGGG-TTTTCCTCACTTGATGATTTTCGCTCAAAGTCC
TCGGAGGA
>chr6D_2852
--------------------------------------------------------------------------------
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-------------------------------------------------------------AAAGTGCGTTATATCGACT
AGA---GGGGG--TGAATAGGCGATTTTTAAAAATTCTTCACTGAGGAATTTGTGGGTGAGGAAATTCCTTAGCGAAGAA
CTACTTGCAGCGGAATAAGTACTCAAAAGTATGCATAGCAGAACACAAGCATAGTCATCATGATGAAATGAAAACAAGCA
CAGAGTACAGAAAGCGTAAACACAGGATAACACAGGATGAAGACAAACAGACTGAGGAAATTGAACTGAGGAAATTGAGT
AAGTCTTCAGTCAAAGTCTTCAAACACAGATATGAACAAGCATACAACACAGTAATGAGGAAATGAAAGAGTTGAGGAAA
TAGAACCAGTTAGCTTGGTTAAGACAATGGTTTGGTAGACCAGTTCCAACAGTTGTCTCAGTTGTACGTCTGGTTGGAGC
GGCTAGGTATTTAAACCTGAGGACACACAGTCCTCACCATATTCTCCTTGAGATAAGGTCACACATACCTCGCCCAATCA
CTCGTGGTAAGTCTTCAGGTGACTTCCAAACCTTCACAAACTCGGTCACTCGGCGATCCACAATTTCCTCTTGGATGCTC
TAGACCATGACGCCTAACCGTCTGGAAGAAGCACAGTCTTCAAAGGTAACAAGCGTCGGATCCACGCAGGATCAATCTCT
TCAGTGATGCTCAATCACTTTGGGTTTGTAGGTGTTTGGGTTTGGGGTTTTCCTCACTTGATGATTTTCGCTCAAAGTCC
TTGGAGGA
>chr7D_2852
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AAAGTGCGTTATATCGACT
AGA---GGGGGGGTGAATAGGCGATTTTTATAAATTCTTCACTGTGGAATTTGTGGATGAGGGAATTCCTTAGCGAAGAA
CTACTTGCAGCGGAATAAGTACTCAAAAGTATGCATAGCAGAACACAAGCATAGTCATCATGATGAAATGAAAACAAGCA
CAGAGTACAGAAAGCGTAAACACAGGATAACACAGGATGAAGACAAACAGACTAAGGAAATTGAAATGAGGAAATTGAGA
AAGTCTTCAGTCAAAGTCTTCAAACACAGATATGAACAAGCATACAACACAGTAATGAGGAAATGGAAGAGTTGAGGAAA
TAGAACCAGTAAGCTTGGTGAAGACAATGATTTGGTAGACCAGTTCCAACTGCTGTCTCAGTTGTACGTCTGGTTGGAGC
GGCTAGGTATTTAAACCTGAGGACACACAGTCCTCACCGTATTCTCCTTGAGCTAAGGTCACATAGACTTCGCCCAATCA
CTCGTGGTAAGTCTTCAGGTGACTTCCAAACCTTCAAAAACTCGGTCACTCGGCGATCCACAATTTCCTCTTGGATGCTC
TAGACCATGACGCCTAACCGTCTGGAAGAAGCACAGTCTTCAAAGGTAACAAGCGTCGGATCCACGCAGGATCAATCTCT
TCAGTGATGCTCAATCACTTTGGGTTTGTAGGTGTTTGGGTTTGGGGTTTTCCTCACTTGATGATTTTCGCTCAAAGTCC
TCGGAGGA
>chr5D_2852
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------AAAGTGCGTTATATCGACT
AGA--GGGGGG--TGAATAGGCGATTTTTATAAATTCTTCACTGAGGAATTTGTGGGTGAGGAAATTCCTTAGCGAAGAA
CTACTTGCAGCGGAATAAGTACTCAAAAGTATGCATAGCAGAACACAAGCATAGTCATCATGATGAAATGAAAACAAGCA
CAGAGTACAGAAAGCGTAAACACAGGATAACACAGGATGAAGACAAACAAACTGAGGAAATTGAACTGAGGAAATTGAGA
AAGTCTTTAGTCAAAGTCTTGAAACACAGATATGAACAAGCATACAACACAGTAATGAGGAAATGGAAGAGTTGAGGAAA
TAGAACCAGTAAGCTTGGTGAAGACAATGGTTTGGTAGACTAGTTCCAACAGCTGTCTCAGTTGTACGTCTGGTTGGAGC
GGCTAGGTATTTAAACCTGAGGACACACAGTCCTCACCGTATTCTCCTTGAGCTAGGGTCACACAGACCTCGCCCAATCA
CTCGTGGTAAGTCTTCAGGTGACTTCCAAACCTTCACAAACTCGGTCACTCAATGATCCACAATTTCCTCTTGGATGCTC
TAGACCATGACGCCTAACCGTCTGGAAGAAGCACAGTCTTCAAAGGTAACAAGCGTCGGATCCACGCAGGATCAATCTCT
TCAGTGATGCTCAATCACTTTGGGTTTGTAGGTGTTTGGGTTTGGGGTTTTCCTCACTTGATGATTTTCGCTCAAAGTCC
TCGGAGGA
>SNPs
-S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S
------------------S-------------S--S--S--S--S--------------------S--------------
-----------S---------------------------------------------S--S-------------------
S-------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
----S------S-------------S----S---S-------------------------S----------S--------
-S-------------------S----------------------------------------------S-----------
--------------------------------------------------------------------------------
--------S--------S--------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S--------------------------------------------------------S-
-----------S-----------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------S--------------S--------------------------------
S-----------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
----------------------------------------------------------------------------S---
-----------------------------------S--------------------------------------------
S-------------------------------------------------------------------------------
---------------------------------------------S--------------S-----S-------------
-----------------------------------------------------S--------------------------
--------------------------------S------------------------------------S----------
----S---------------------------------------------------------S-----------------
--------------------------S--------------------S----------------------------S---
S-------------S-------------------------------------S---------------------------
------------------------------------------------------------------S-------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------S----------------S------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S------------------
---S----
>forward_738
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------AT
GCGAGCACCAGGATTTGA--------------------------------------------------------------
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--------
>reverse_2827
--------------------------------------------------------------------------------
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--------------------------CCCTAGAGTCAAGAGCAGCC----------------------------------
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--------
