>input_sequence_47500
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--------CAATCT---GATTTCAAAAA------------------------------------CTTCGTCGACGTGCGT
GCGTACTTGCGCCATGGACGCCGT---CGTGTTGGGTGACGTTGATGATCTCGACTTCGACTTGGGTTTTATGGACGGGT
TCGAGT---------------TCGACCTGCTGGACATGGACCTCACCGAGTTCTG---CCACGGCGACGGCGAGTGCTTG
CTGCCTGCCGTGGCCGATAAGGATGGCGGTTTGGGTTTGGATTTAGGTTCTGATGACGGTG------GCGAAGGGGGGAG
GGAGAGCTCGCCGGACTCCGTGGTGACGGACGACGGCGCGCCGCCTCTGTCGTTAGAGCCGTCTGGGGATCGCGACGATG
GCGAGATGTCGGCCTACGTGGGCGACCTGGAGAGGTTCCTCATGGAGAGCGAGGATGACGCGGAGGCCGGCGGGCCGTTC
GCGGCCAAGGGGCTTGCCGCCAACGACCACTTGTTCGACGATCTCGCTGTTGCGGACGGCGGTTACGTCCAGCCGTCGAC
TGCAGCGGAGGAGTTTGCCGCCGCGG------------------------------------------------------
------------------------------ACTACTTCTTGGGTGATCTCGACGACGGTTACGCTGAGCCGGCGACTCCA
GGGAAGGATCTCGTCCTCGACGACTACTTCTTCGGCGATCTC--------------------------------------
-------------GTCTCGTACGACTACTTATACGATCCTGCTGTTGCGAGCGATGGCTGCGTCGAGCCCGCGGCCGTTG
CCAGCGTGGACGATGCTGCATCATCGGCGACGGAGGAGGAGGATGCTGGC---------GAGTACTACGACGACGACGAA
GCGACCTCGAGGAAGCGCGCAAGGTATGAATGAATTGAATCTAGTTTTCATTCATTCATTC----TGTGCTAATTGCAAG
TTTAGATCTTTTATCTTCCTAGGCCCTGGTAATCGGCAGAAATGGAACAAACAACCTGTACATAATTGGCAGTTAGTATT
AGCTAGGTGAAGAAATTTCGTTTCACGAAAAA-ATTGATGTAGAAATTAACTCGAATATTGCACTATTATTACTACTTGC
AGTTTGATCTTTC--TTTTTCTGAAAGTGCTTGATCATCTTTGTCATGTGCGCTGCGTATATTGCACTATTATTACTTGC
AGTTTACTCTGTTTCCCCTTTCTTTACATA--CATGAGAGGGATTATTTGCAACGAATTTCAATTTGATGAAACTTGTTG
CTGATATTTCCGGTGCTGCCTCAGGCAGAGGAAGGGCGGCGCTGCGGTGCCACGCGAAGCAGAGCTCCGGGAAACGCCGG
TGATGCATGCCATCTGGTCGATCTCGACTGGAAACGGGTGCCGCCCCCTTGGTCACCATTGGCTGCATCCCTGCACCACA
GTGTGCCTGTTGGCCTGATCGATCGATGGATCAACCTGCAGTTACGGCCCGTCTGGGAGAAAGATCGCGACGGCGCCTGC
CTCAGGTATTCGAACCGGTAGGTGAAAAATTCAGAGGAA------C------ATTTCCCCGTGTT-CTTCTATGATATTT
TCTGCCTTTCACACCAACCCGGCCATTGGACGATTATATAAAGTCATGGGACGAACTATAAACAA---------CACATA
CTCCTCTGTTCGGAGTAGAAAATTTTGGTAGCAACTCTCGAACAACACGTTTACAAAAAGAAAAGAAAGCTTAGTTTTAT
AA------------------------------------------------------------------------------
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>chr2D_1_TraesCS2D01G488000
ACGCGGCCTGGCAACCCC--TCGCCTTTTGGTGTGAACCGACCCGTGCGGGTTCAGCGCCGGTGCACGCCCGCACGCCTC
GCCGTGCACCGGGGTGAGCCGGTGACGCCCACGCGCTCATTCATGCGTGCGGGGACGGAGAGAGGAGGAATCCGTGCGTG
GATCTATCTGCGGTGCGGTACGAGGTGGCAGTTGGGGTCACGGCGCGGCCCGAAGCTCGTGCTCGGGCATCCCGTGCCGC
CAGCAAGCCGGGCGCATCACCAGCA----CCACCTGCCCCGTTGAATCGTCTCAGTTCAACGTTGCATCAGCATTTTTTT
AGTTTTTTTTTAAAATCATTTTTTAGGGGATACACCGATCGGGTTGTCTCACGTGTTTTT-CCTTTGTGTCCAGGCCTCC
AGGCTGAGCACCTTGTTCCGGCCTGCTGAGCAGCCCGTATCGGCGGCCTTTCGCCAGCCCAGTG-------GTGTGTGCA
GCCCTACCGCCCTCTTCCCGGCCCATGTTTCCCGTGCACGACTCTACACCCCCCACGTATGTGCACACTCGTTACTCAAA
AAAAGAAAAAGTATGTGCACACTCCACCTAACAATTTTAGATT------TTCAAAAGATAGCAACACACGTCGCAATCTG
CGTTCTCATAAAATTCGAATTCGTATCCCCCCGCGGTACCGCGAGACGTAGGAAATCCAGAAACCTCCATAGAAACACGC
AAGC----ACGCATCTCGATCGATCGGCACCGTCGACGCACCAGACTCAATCAATCCACACCGCTCACGAGTCCACCACA
TCCAAACCGCCATGATGAGAAGAGTCAAT-TCCCCACGTCACGCTTTCCCCTCTCGATCGGGA-----------CGTGCG
TG----CGTCGGTTCCTCCCGCAGCGGCCGGAAGGAAA-----CTTCCCGGATACGGCGCCCGCGGCCCGGCCGAACCTT
CCGCGGTAAGGAACCGACTCGGGCCACGTCTCCTCCGTCCC--TCCCGCTCCCATATAAAC-CACCCCTCCCCTGGTCGA
CGTCCTCACAATCT---GATTTCAAAAA------------------------------------CTTCGTCGACGTGCGT
GCGTACTTGCGCCATGGACGCCGT---CGTGTTGGGTGACGTTGATGATCTCGACTTCGACTTGGGTTTTATGGACGGGT
TCGAGT---------------TCGACCTGCTGGACATGGACCTCACCGAGTTCTG---CCACGGCGACGGCGAGTGCTTG
CTGCCTGCCGTGGCCGATAAGGATGGCGGTTTGGGTTTGGATTTAGGTTCTGATGACGGTG------GCGAAGGGGGGAG
GGAGAGCTCGCCGGACTCCGTGGTGACGGACGACGGCGCGCCGCCTCTGTCGTTAGAGCCGTCTGGGGATCGCGACGATG
GCGAGATGTCGGCCTACGTGGGCGACCTGGAGAGGTTCCTCATGGAGAGCGAGGATGACGCGGAGGCCGGCGGGCCGTTC
GCGGCCAAGGGGCTTGCCGCCAACGACCACTTGTTCGACGATCTCGCTGTTGCGGACGGCGGTTACGTCCAGCCGTCGAC
TGCAGCGGAGGAGTTTGCCGCCGCGG------------------------------------------------------
------------------------------ACTACTTCTTGGGTGATCTCGACGACGGTTACGCTGAGCCGGCGACTCCA
GGGAAGGATCTCGTCCTCGACGACTACTTCTTCGGCGATCTC--------------------------------------
-------------GTCTCGTACGACTACTTATACGATCCTGCTGTTGCGAGCGATGGCTGCGTCGAGCCCGCGGCCGTTG
CCAGCGTGGACGATGCTGCATCATCGGCGACGGAGGAGGAGGATGCTGGC---------GAGTACTACGACGACGACGAA
GCGACCTCGAGGAAGCGCGCAAGGTATGAATGAATTGAATCTAGTTTTCATTCATTCATTC----TGTGCTAATTGCAAG
TTTAGATCTTTTATCTTCCTAGGCCCTGGTAATCGGCAGAAATGGAACAAACAACCTGTACATAATTGGCAGTTAGTATT
AGCTAGGTGAAGAAATTTCGTTTCACGAAAAA-ATTGATGTAGAAATTAACTCGAATATTGCACTATTATTACTACTTGC
AGTTTGATCTTTC--TTTTTCTGAAAGTGCTTGATCATCTTTGTCATGTGCGCTGCGTATATTGCACTATTATTACTTGC
AGTTTACTCTGTTTCCCCTTTCTTTACATA--CATGAGAGGGATTATTTGCAACGAATTTCAATTTGATGAAACTTGTTG
CTGATATTTCCGGTGCTGCCTCAGGCAGAGGAAGGGCGGCGCTGCGGTGCCACGCGAAGCAGAGCTCCGGGAAACGCCGG
TGATGCATGCCATCTGGTCGATCTCGACTGGAAACGGGTGCCGCCCCCTTGGTCACCATTGGCTGCATCCCTGCACCACA
GTGTGCCTGTTGGCCTGATCGATCGATGGATCAACCTGCAGTTACGGCCCGTCTGGGAGAAAGATCGCGACGGCGCCTGC
CTCAGGTATTCGAACCGGTAGGTGAAAAATTCAGAGGAA------C------ATTTCCCCGTGTT-CTTCTATGATATTT
TCTGCCTTTCACACCAACCCGGCCATTGGACGATTATATAAAGTCATGGGACGAACTATAAACAA---------CACATA
CTCCTCTGTTCGGAGTAGAAAATTTTGGTAGCAACTCTCGAACAACACGTTTACAAAAAGAAAAGAAAGCTTAGTTTTAT
AATGTACGAGTACACCTAATATTCCTCTTCTTGTACACATACA--TCCCGTGCGCATTCCGGATGTTAG-----------
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------------------------------------------------TAGAAGTAC--AAGAAACCTTCTACTAGGTAG
AGCATGTCATATTCTTGTTCTCGACCGTCCAGAATTTTTTTTCTCTGAAAATCCAGTGAGCGCCACAAATCGTCCAGGCT
TGTGTTTATTCAGTGTGGG-CCGCTTATAATCTTGCTCGTACTGCTACCAGTTAAGG-CTTATTGATTGGTGTACGTTTA
GAATTACAGGAAAC------------------------------------------------------------------
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---------------------------CTTTTAGTTGGTAGAG-CATGGCAATCTTTTGCTTTCTAAGCATCGTCGACAG
TCCAGCCCCCTTTTCTCTGAAAAAAA-TGCCGTAAGCACCTTCAATCGTCCAGGCTTGTGTTTTGTTCAGTGCGGATAGC
ATATAATC---T-GCTCGTGCTGTTCATTTCTTTGGGTAGACAAAAGCTTCAATGGTTCTGGCCCT---------GTGCA
GTCCATCCATGGAAAAATTTGGAAGCGACTATGGTGTGAATTGTGATCAATGCA--------------CTCAGCTGCAGC
AACGATTGTTTTCTCCCACTAATTATGAAGGCTGTTT----GTGAAACAGTAGAACACAGTTTCCTGTATTGTCAGTTTA
CA--AAGGAAAATTGGAAGGTATGGACTCCGAAAACAAGG----------------TTCCTGTATTGTCAG--------T
TTCCTTCAGAATTAAGCAGTGGC------------------------TG---------TGGCTGTTACAATCCTATGGTC
TCTGCGGTGTGAGTGTGGCACATTTGGAAGTAGAGATGAAACCATATATCTGCATATGTTGAATGATCACAACAGTCTTT
GAAGCCTAGATCTTCTATCTATCAGGTTTGAGATCCCATCCTCTGTTCCAGTGTGCATGTACTCCGCCATCTCTGGAATT
TTTTCGCCTTCACATTGTCTGTTCAATCGAGTGC---------------ATCTTTCTAGCAAGTGACTCGCTTGTTTCAG
GCTGCCACACTCTGCCTAT--TTTATATCTTTTATTCTAGGTTTCTTTATCTTCTCCTTTAAAAAATCT-
>chr2D_1
ACGCGGCCTGGCAACCCC--TCGCCTTTTGGTGTGAACCGACCCGTGCGGGTTCAGCGCCGGTGCACGCCCGCACGCCTC
GCCGTGCACTGGGGTGAGCCGGTGACGCCCACGCGCTCATGCATGCGTGCGGGGACGGAGAGAGGAGGAATCCGTGCGTG
GATCTATCTGCGGTGCGGTACGAGGTGGCAGTTGGGGTCACGGCGCGGCCCGAAGCTCGTGCTCGGGCATCCCGTGCCGC
CAGCAAGCCGGGCGCATCACCAGCA----CCACCTGCCCCGTTGAATCGTCTCAGTTCAACGTTGCATCAGCGTTTTTTT
AGTTT-TTTTTTAAATCTTTTTTTAGGGGATACACCGATCGGGTTGTCTCACGTGTTTTT-CCTTTGTGTCCAGGCCTCC
AGGCTGAGCACCTTGTTCCGGCCTGCTGAGCAGCCCGTATCGGCGGCCTTTCGCCAGCCCAGTG-------GTGTGTGCA
GCCCTACCGCCCTCTTCCCGGCCCATGTTTCCCGTGCACGACTCTACACCCCCCACGTATGTGCACACTCGTTACTCAAA
AAAAGAAAAAT---------------CCTAACAATTTTAGATT------TTCAAAAGTATGTACT---------------
---------------------------------------------------------CAGAAACCTCCATAGAAACACGC
AAGC----ACGCATCTCGATCGATCGGCACCGTCGACGCACCAGACTCAATCAATCCACACCGCTCACGAGTCCACCACA
TCCAAACCGCCATGATGAGAAGAGTCAAT-TCCCCACGTCACGCTTTCCCCTCTCGATCGGGA-----------CGTGCG
TG----CGTCGGTTCCTCCCGCAGCGGCCGGAAGA-----AAACATCCCGGATACGGCGCCCGCGGCCCGGCCGAACCTT
CCGCGGTAAGGAACCGACTCGGGCCACGTCTCCTCCGTCCC--TCCCGCTCCCATATAAAA-CCCCCCTCCCCTGGTCGA
CGTCCTCACAATCT---GATTTCAAAAACTTCCAGGCGCGCG----CCGGCTCATCGATCGAACCTTCGTCGACGTGCGT
ACGTACTTGCGCCATGGACGCCGT---CGTGTTGGGTGACGTTGATGATCTCGACTTCGACTTGGGTTTTATGGACGGGT
TCGAGT---------------TCGACCTGCTGGACATGGACCTCACCGAGTTCTG---CCACGGCGACGGCGAGTGCTTG
CTGCCTGCCGTGGCCGATAAGGATGGCGGTTTGGGTTTGGATTTAGGTTCTGATGACGGTG------GCGAAGGGGGGAG
GGAGAGCTCGCCGGACTCCGTGGTGACGGACGACGGCGCGCCGCCTCTGTCGTTAGAGCCGTCTGGGGATCGCGACGATG
GCGAGATGTCGGCCTACGTGGGCGACCTGGAGAGGTTCCTCATGGAGAGCGAGGATGACGCGGAGGCCGGCGGGCCGTTC
GCGGCCAAGGGGCTTGCCGCCAACGACCACTTGTTCGACGATCTCGCTGTTGCGGACGGCGGTTACGTCCAGCCGTCGAC
TGCAGCGGAGGAGTTTGCCGCCGCGG------------------------------------------------------
------------------------------ACTACTTCTTGGGTGATCTCGACGACGGTTACGCTGAGCCGGCGACTCCA
GGGAAGGATCTCGTCCTCGACGACTACTTCTTCGGCGATCTC--------------------------------------
-------------GTCTCGTACGACTACTTATACGATCCTGCTGTTGGGAGCGATGGCTGCGTCGAGCCCGCGGCCGTTG
CCAGCGTGGACGATGCTGCATCATCGGCGACGGAGGAGGAGGATGCTGGC---------GAGTACTACGACGACGACGAA
GCGACCTCGAGGAAGCGCGCAAGGTATGAATGAATTGAATCGAGTTTTCATTCATTCATTC----TGTGCTAATTGCAAG
TTTAGATCTTTTATCTTCCTGGGCCCTGGTAATCGGCAGAAATGGAACAAACAACCTGTACATAATTGGCAGTTAGTATT
AGCTAGGTGAAGAAATTTCGTTTCACGAAAAA-ATTGATGTAGAAATTAACTCGAATATTGCACTATTATTACTACTTGC
AGTTTGATCTTTC--TTTTTCTGAAAGTGCTTGATCATCTTTGTCATGTGCGCTGCGTATATTGCACTATTATTACTTGC
AGTTTACTCTGTTTCCCCTTTCTTTACATA--CATGAGAGGGATTATTTGCAACGAATTTCAATTTGATGAAACTTGTTG
CTGATATTTCCGGTGCTGCCTCGGGCAGAGGAAGGGCGGCGCTGCGGTGCCACGCGAAGCAGAGCTCCGGGAAACGCCGG
TGATGCATGCCATCTGGTCGATCTCGACTGGAAACGGGTGCCGCCCCCTTGGTCACCATTGGCTGCATCCCTGCACCACA
GTGTGCCTGTTGGCCTGATCGATCGATGGATCAACCTGCAGTTACGGTCCGTCTGGGAGAAAGATGGCGACGGCGCCTGC
CTCAGGTATTCGAACCGGTAGGTGAAAAATTCAGAGGAA------C------ATTTCCCCGTGTT-CTTCTATGATATTT
TCTGCCTTTCACACCAACCCGGCCATTGGACGATTATA--AAGTCATGGGACGAACTATAAACAA---------CACATA
CTCCTCTGTTCGGAGTAGAAAATTTTGGTAGCAACTCTCGAACAACACGTTTACAAAAAGAAAAGAAAGCTTAGTTTTAT
AATGTACGAGTACACCTAATATTCCTCTTCTTGTACACATACA--TCCCGTGCGCATTCCGGATGTTAG-----------
--------------------------------------------------------------------------------
------------------------------------------------TAGAAGTAC--AAGAAACCTTCTACTAGGTAG
AGCATGTCAGATTCTTGTTCTCGACCGTCCAGAATTTTTTTTCTCTGAAAATCCAGTGAGCGCCACAAATCGTCCAGGCT
TGTGTTTATTCAGTGTGGG-CCGCTTATAATCTTGCTCGTACTGCTACCAGTTAAGG-CTTATTGATTGGTGTACGTTTA
GAATTACAGGAAAC------------------------------------------------------------------
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---------------------------CTTTTAGTTGGTAGAG-CATGGCAATCTTTTGCTTTCTAAGCATCGTCGACAG
TCCAGCCCCCTTTTCTCTGAAAAAAA-TGCCGTAAGCACCTTCAATCGTCCAGGCTTGTGCTT-GTTCAGTGCGGATAGC
ATATAATC---T-GCTCGTGCTGTTCATTTCTTTGGGTAGACAAAAGCTTCAATGGTTCTGGCCCT---------GTGCA
GTCCATCCATGGAAAAATTTGGAAGCGACTATGGTGTGAATTGTGATCAATGCA--------------CTCAGCTGCAGC
AACGATTGTTTTCTCCCACTAATTATGAAGGCT-------------------GAACACAGTTTCCTGTATTGTCAGTTTA
CA--AAGGAAAATTGGAAGGTATGGACTCCGAAAACAAGG----------------TTCCTGTATTGTCAG--------T
TTCCTTCAGAATTAAGCAGTGGC------------------------TG---------TGGCTGTTACAATCCTATGGTC
TCTGCGGTGTGAGTGTGGCACATTTGGAAGTAGAGATGAAACCATATATCTGCATATGTTGAATGATCACAACACTCTTT
GAAGCCTAGATCTTCTATCTATCAGGTTTGAGATCCCATCCTCTGTTCCAGTGTGCATGTACTCCGCCATCTCTGGAATT
TTTTCGCCTTCACATTGTCTGTTCAATCGAGTGC---------------ATCTTTCTAGCAAGTGACTCGCTTGTTTCAG
GCTGCCACACTCCGCCTAT--TTTATATCTTTTATTCTAGGTTTCTTTATCTTCTCCTTTAAAAAATCT-
>chr2B_1
ACGCGGCCTGGCAAACCCCCTCACCTTTTGGTGTGAACCGACTCGTGCGGGTTCAGCGCCGGTGCACGCCCGCACGCCTC
GCCGTGCACCGGGGTGAGCCCAGGCACGCGC---------TCATGCGTGCGGGGACGGAGAG--GAGGAATCCCTGCGTG
CATCTATCTGCGCTGCGGTACGAGGTGGCAGTTGGGGTTCCGGCGCGGCCCGAAGCTCGTGCTCGGGCATCCCATGCCGC
CAGCAAGTCGGGCGCATCACCACCACCACCCACCTGCCCCGTTGAATCGCGTCAGTTCAGATTTGCATCAGCGTTTTTTT
AGTCT-TTTTTTCTTAGGTATAT------ATACACTGATCGGGTTGTCTCACGTGTTTTTTCCTTTGTGTCCACGCCTCC
AGGCTGAGCACCTTGTTCCGGCCTGCT--------------GGGGGCCTTTCGCCAGCCCATAGCTGGTGTGTGTGTACA
GCCCTACCGCCCTCTTCCCGGCCCATGTCTCCCTTGCACGACTCTACGCCCCCTACGTGTATGCACACTCCGCCTACCAA
-----------------------------------TTTTTAGTTTTTCATTCGAAAGATAGCAACACACGTCGCAATCTA
CGTTCTCATAAAATTCGGATTCGTACCTACCCGCACTACCGCGTCACGTAGGAAATCCAGAAACCTCCAGAGAAACTCCC
CATC----ACGCATCTCGATCGATCGGCACCGTCGATGCACCAGATCAAATCAATCCACACCGCTCACCAGTTAGCCACA
CCCAAACCGCCTCTGCATGC---GTCGGT-TCCCCACGTCGCGCTCTCCCCTCCCGATCGGGA-----------CGTGCG
TG----CGTCGGTTCCTCCCGCGGAA---GGAACGAAA-----CTTCGAAGACAGC---------GCCCGGCCGAACCTT
CCGCGGTAAGGAACCGACTCCGGCCACGTCTCCTCCGTCCC--GCCCGCTCCCATATAAAC-CCCCCCTCCCCTGGTCGA
CGTCCTCACAATCT---GATTTCAAAATCTTCCGGGCGCGCGTTGCCTGCCTCATCGATCGAACCTCCGTCGACGTGCGT
ACGCACTCGCGCCATGGCCGCCGC---CGCGCTGGGTGACGTTGATGACCTCGACTTTGACCTGGGTTTTATGGACGGGC
TCGAGTGCCTCGACTTCGAGTTCGACCTGCCAGACATGGGCCTCACCGAGTTGTGCCACGGCGGCGACGGCGAGTGCTTG
CTGCCCTCCGTGGCCGATAAGGAGGGCGGTTTGGTTTTGGATCTGGGTTCTCATGATGGTGATGGTGCCCAAGGGGGGAG
GGAGAGCTCGCCGGACTCCGTGTTGACGGACGACGGCGCGCCGCCGTCG------GAGTCGGCCGGGTATCGCGAGGTCG
GCGAGATGTCGACATACGCAACCGAGCTGGAGAGGTTCCTCATGGAGGACGAGGATAACGGGGACGCCGGCGGGCCGCTC
CATCCGAAGGAGCTTGCCGCCGAC--------------------------------------------------------
-------------------------G------------------------------------------------------
------------------------------ACTACTTCTTGGGTGATCTCGACGACCGTTACATCGAGCCGGCGACTCCA
GGGAAGGATCTCGTCCTCGACGACGACTACTTCGGCGATCTC--------------------------------------
-------------GTCTCGTACGACTACTTCTACGATCTTGCTGTTGCGGGCGACGGCTGCGTCGAGCCCGCGGCCGGTG
CCAGCGTGGACGCTGCTGCATCACCGGCGACGGAGGAGGAGGATGCTGGC---------GAG------GACGACGACGAA
GCGACCTCGAGGAAGCGTGCAAGGTACGAATGAATTGAATCGAGTTTTCATTCATTCATTC----TGTGCTAATTGCAAA
TTTAGATCTTTTATCTTCCTGCGCCATGGTAATCGGCAGAAATGGAAGAAACAACCTGTACATAATTGGCAGTTAGTGTA
AGCTAGATGAAGAAATTTCGTTTCACGAAAAA-ATTGATGTAGAAATTAACTCGAATATTGCACTATTATTACTTG---C
AGTTTGATTTTGA--TTTTTCTGAAAGTGCTTGATCATCTTTGTCATTTGCGCTGCGTATATTGCACTATTATTACTTGC
AGTTTACTCTGTTTCCCCTTTCTTTAC--A--CATGAGAAGGATTATTTGCAACGAATTTCAATTTGATGAAACTTGTTG
CTGATATTTCCGGTGCTGCCTCAGGCAGAGGAAGGGCGCCGCTGCGGTGCCACGCGAAGCAGAGCTCCGGGAAACGCCGG
TGATGCATGCCATCTCGTCGATCTCGACTGGAAACGGGTGCCGCCCCCTTGGTTACCATTGGCTGCATCCCTGCACCACA
GTGTGCCTGCTGGCCTGATCGATC-ATCGATCAACCTGTTCTGGGAGAAAGATCG---GAACG---------GCGCCTGG
CTCAGGTATTCGAACCGGTAGGTGAAAATTTCAGAGGAA------CACCTGCATTTCCCCATGTTCCTTCTATGATATTT
TCTGCCTTTCACACCAACCCTGCCATTGGACAATTATA--AAGTCACGGGACGAATTAACC-------------CACATA
CTCCTCTCTTCGGAGTAGAAAATTCTGGTGGCAACTCTCGAACAACACGTTTTCAAAAACAAAAAAAATCTC-GTTTTCT
AATGTACGAGTGCACCTAATACTGCTCTTCTCGTACACACACACATCCCGTACACATTCC--------------------
--------------------------------------------------------------------------------
----------------------AAAGAGCTTAGTGGTTGGTGTC------------------------------------
---------AATTTTTGTTCTCGACCTTCCGCTA-TTTTTTTCTCTGAAAATCCAGTGAGCACCACCAAGCGTCCAGGCT
TGTGTTTATTCAGTGTGGGGCTGCTTATAATCTTGCTCGTGCTGCTACCAGTAAAGGGCTTATGGGTTGTTGTATGT---
---TTACAAGAAAC------------------------------------------------------------------
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---------------------------CTTTTAGTAGGAAGAG-CAGGACAATCTTTTGTTTTCTACCCTTGTTCGACAG
TCCAGCCTT-TTTTCTCTGAAAAAATTTGTCGTAAGCACCATCAATCGTCCAGGCTTGTGT----------GCGGGCAGC
ATATAAAATTTT-GCTCATGCTGTTCGTTTCTTTGGGTAGGCAGAAGCTTCAA---------------------------
------------------------------------------------------------------------GCTGCAGC
AAC-ATCGTTTCCTCCCACTAATTACGAAGGCTGCCTCGTGATGAACTAGTACAGCACAGTTTCCTGTATTGTTTA----
---CAAGGAAAATTGGAAGGTATGGATTCTGAAAACAAGG----------------TCAGTCTGAATACAGTTTCATGTT
TTCCTTCAGAATTTAGCAGTGGTCTCTGTGGTCTCTGCAGTCTGAATACAAGGAAAACTGGCTGTTACAATCCTATGGTC
TCTGTGATGTGAGTGTGGCACATTTGGAAGTAGAGATGAAAGCATATATCTGCATATGTTGAATGATCACAATACTCTTT
GATGTCTAGATCTTCTATC----AGGTTTGAGATCTCATC--CTGTTCCAATATGCATGGACTCCACCA-----------
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>chr2A_524
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---------------------------------------------------------TATGTGCACACTTTATCTTAATA
AAGAAAAAACGTATGTGCACACTCCACCGACCAATTTTATAGTTTTTC-----AAAGATAGCAACAGACGTCGCAATCTG
CGTTCTCAAAAAGTTCGAATTCGTACCTCCCCGCGGGACCGCGTCTCGTAGGAAATCCAGAAACCTCCGGAGAAACACGC
AAGC----ACGCATCTCGACCGATCGGCACCGTCGACGCACCAGATCAAATCAATCCACACCGCTCATCACTTGGCCACC
GCCA--------C---GAGAAGAGTCAAACTCCCCACGTCGCGCTTTCCCGTTCCGATCGGGA-----------CGTGCG
TGCGTACGTCGGTTCCTCCCGCAGCGGCCGGAAGGAAAGGAAACTTCCCGGATACGCCGCCCGGGGCCCGGCCGAACCTT
GCGCGGTAAGGAACCGACTCCGGCCACGTCTCCCCCGTCTCCGTCCCGCCCCCATATAAAATCCCCCCTCCCCTGGTCGA
CGTCCTCACAATCTTCTGATTTCAAAAACTTCCGGGCGCGCGTTGGCCGGCTCATCGATCGAACCTTCGTCGACGTGCGT
ACGTACTCGCGCCATGGCCGCCGCCGCCGCGTTGGGTGGCGTGGATGATCTCGACTTCGACTTGGGTTTTATGGACGGG-
--------------TTCGAGTTCGACTTGCTGGACATGGACCTCACCGAGTTCTG---CGGCGGCGACGGCGAGTGCTTG
CTGCCCGCCGTGGCCGATAAGGAGGGCGGTTTCGGTTTGGATCCGGGTTCTC------GTGATGGTGGCGACGGCGGGAG
AGAGAGCTCGCCGGACTCCGTGGTGACGGACGACGGCGCGCCGCCGTCG------GAGTCGCATGGGGATCGCGACGACG
GCGGGATGTCGACCTACGCGAGCGAGCTGGAGAGGTTCCTCATGGAGGACGACGATGGCGGGGACGCCGGCGGGCCGCTC
GATCTGAAGGAGCCTGCCGCGGAC--------------------------------------------------------
-------------------------G------------------------------------------------------
------------------------------ACTACTTCTTGGGTGATCTCGACGGCCGTTACGCCGAGCCGGCGACTCCA
GGGAAGGATCTCGTCCTCGACGACTACTTCTTGGGCGATCTC--------------------------------------
-------------GTCTCGTACGACTACTTCTACGATCTTGCTGCT----------------------------------
-----GCGGACGATGCTGCATCACCGGCGACGGAGGAGGAGGATGATTCTGCTCGCGAGGAC------GACTACTACGAA
GCGACCTCGAGGAAGCGCGCAAGGTACGAATGAATTGAATCGAGTTTTCATTCATTCATTCATTCTGTGCTAATTGCAAG
TTTAGATCTTTCATCTTCCTGGGCCATGGTAATCGGCAGAAATGGGAAAAACAACCTGTACATAATTGGCAG--------
---TAGATGAAGAAATTTCGTTTTACGAAAAAAATTGATGTAGAAATTGACTCGAATATTGCACTATTATTACC---TGC
AGTTTGATCTTTCTTTTTTTCTGAAAGTGCTTGATCATCTTTGTCATGTGCGCTGCGTATATTGCACTATTATTACTT--
------------TTCCCCTTTCTTTAC--ATACATGAGAAGGATTATTTGCAACGAATTTCAATTTGATGAAACTTGTTG
CTTATATTTCCGGTGCTGCCTCAGGCAGAGGAAGGGCGCCGCTGCGGTGTCACGCGAAGCAGAGCTCCGGGGAGCGCCGG
TGATGCATGGCATCTCGTCGATCTCGACTGGAATCGGGTGCCGGCCCCTTGGTCACCATTGGCTGCATCCCTGCACCACA
GTGTGCCTGTTGGCCTGATCGATC-ATCGATCAACCTGCAGTTACGGTCCGTCTGGGAGAAAG---------GCGCCTGC
CTCAGGTATTCGAACCGGTAGGTGAAAATTTCAGAGGAACACCTGC------ATTTCCCTGTGTT-CTTCTATGATATTT
TCTGCCTTACGCACCAACCCTGCCATTGGACGAC--TA--AAGTCATGGGAGATGGGACGAACCAGGGACTCGGCACAGA
CTCCTCTGTTCGGAGTAGAAAATTTTGGTAGCAACTCTCGAACAACACGTTTTCAAAAGGAAAAGAAAGCTC-GTTTTCT
AATGCGCTAGTACACCTAATACTCCCCTTCTCGTACACACACA--TCCTGTACACGTTCCGTATACCGGTAGCACAATTC
GTTGACTATCTGCCTAATACAGGACCCATCTCATACACATTTCGTATACCGGTAGCATTCCGTATGCCTAATGCTTGATA
CTTAGTTTCTACCACTACCAGTAAAGAGCTTGGTGGTTGATGTACGTTTGAAGTACAAGAAGAAACCTTTTACTAGGTAG
AGAATGTTAAATTTTTGTTCTCGACCGTCCAGAATTTTTTTTCTCTGAAAATCCAGTGAGCACCACCAATCGTCCAGGCT
TGTGCTTATTCAGTGTGGG-CCGCATATAATCTTAATCGTCCAGGCTTGT------G-CTTATCGGTTGTTGTAGGTTTA
GAAGTACAAGAAAC------------------------------------------------------------------
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---------------------------CTT-------------------------TTTTGTTTCTACGCATCATCGTCAA
GCCTTTTTT-T-----------------------AGCACCTTCAACCGTCCAGGCTTGTGTTT-GTTCAGTGCGGGCAGC
ATATAATC---TTGCTCATGCTGTTCG-TTCTTTGGGTAGAGAGAAGCTTCAATGGTTGTGGCCCTTGTGGCCCTGTGCA
GTCCATCCATGAAAAAAACTGGAAGCGACTGTGGTCTGATCTATGTCAGACTTGAGGAACCACTGGTGCTCAGCTGCAGC
AACGAGCGTTTTTTCCCTCTAGTTACGAAGGCTGCGTCGTGATGAACTAGTGGAACACAGTTTCCTGTATTGTCAGTTTA
TACCAAGCAAGATTGGAAGGTATG-ACTTTGAAAACAAGGTCAGTCTGAACACAGTTTCCTTCATTGCCAG--------T
TTCCTTCAGAATTAAGCAGTGGCAGTGGCAGTGGCAGTGGCTGTGCATG---------TGGCTGTTACATTCCTATGGTC
TGTGTCGTGTGATATG-------------------------------------------TGAATGATCACAACACTCTTT
GAAGCCTAGATCTTCTATCTATTAAGTCTGAGATCCCATCCTCTGTTCCAGTATCCATGGACTCCACCA-----------
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>chr2B_624
TCTCAAA-------------------------------------------------------------------------
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--------AAAAGTTGGAACTCGTGCCTCTCCGCGGTACCGCGTCACGTAGGAAATCCAGAAACCCCCAGAGGAACACGC
AAGTACGTACGCATCTCGATCGATCGGCACCGTCGACGCACCAGATCAAATCAATCTACACCGCCCACCACTTAACCCCA
TCCAAACCGCCAC---GAGAAGAGTCAAT-TCCCCACGGCGCGCTCTCCCCTCCTCGTAGCTGATCGGGACGTGCGTGCG
TG----CGTCGGTTCCTCCCGCAGCGGCCGGAAGGAAAGGAAACTTCCCGGATACGGCGCCCGTGGCCCGGCCGAACCTT
CCGCGGTAAGGAACCGACTCCGGCCACGTCTCCTCCGTCCC--GCCCGCTCCCATATAAAG-CCCACCTCCCCTGGTCGA
CGTCCTCACAATAT---GATTTCAAAAAACTCCCATCGA--------------------------------------CGT
GCGAACTCGCGCCATGGCCGCCGC---CGCGTTGGGTGACGTTGATGATCTCGACTTCGACCTGGGTTTTATCGACGGGC
TCGAGTGCTTCGACTTCGAGTTCGACCTGCCGGACATGGGCCTCACCGAGTTGTGCCACGGCGGCGACGGCGAGTGCTTG
CTGCCCGCCGTGGCCGATAAGGAGGGCGGTTTGGGTTTGGATCTGGGTTCTC------GTGATGGTGGCGACGGCGGGAG
AGAGAGCTCGCCGGACTCCGTGGTGACGGACGACGGCGCGCCGCCTCTGTCGTTAGAGTCGTCTGGGGATCGCGACGATG
GCGAGATGTCGGCCTACGTGGGCGACCTGGAGAGGTTCCTCATGGAGAGCGAGGATGACGCCGAGGCCGGCGGGCCGTTC
GCGGCCAAGGGGCTTGCCGCCAAC--------------------------------------------------------
-------------------------GACCACTTGTTCGACGATCTCGCTGTTGCGGACGACGGTTACGTCGAGCCGTCCA
CTGCAGCGGAAGAGTTTGCCGCCGCCGGCTACTACTACTTCGGTGATCTCGACGACGGTTACGCGGAGCCGGCGACTCCA
GGGAAGGATCTCGTCCTCGACGACTACTTGTTCGGCGATCCCGTTGTTGCGGGCGACGGTTACATCGAGCCGTACACTGC
AGGGGAGGATCTGGTCTCCGACGACTACTTCTACGATGTTGCTGCT----------------------------------
-----GTGGACGATGCTGCTC---------------------------GC---------GAG------GACGACGACGAA
GCGACCTCGAGGAAGCGTGCAAGGTACGAATGAATTGAATCGAGTTTTCATTCATTCATTCATTCCGTGCTAATTGCAAA
TTTAGATCTTTTATCTTCCTGGGCCATCGTAATTGGCAGAAATGGAACAAACAACATGTACATAATTGGCAG--------
---TAGATGAAGAAATTTCGTTTTACGAAAAA-ATTGATGTAGAAATTAACTCAAATATTGCACTATTATTACTTG--GC
AGTTTGATCTTTC-TTTTTTCTGAAAGTGCTTGATCATCTTTGTCATGTGCGCTGCGTATATTGCACTATTATTACTTGC
AGTTTACTCTGTTTCCCCTTTCTT----TA--CATGAGAAGGATTATTTGCAACGAATTTCAATTTGATGAAACTTGTTG
CTGATATTTCCGGTGCTGCCTCAGGCAGAGGAAGGGCGCCGCTGCGGTGCCACGTGAAGCAGAGCTCCGGGGAACGCCGG
TGATGCATGCCATCTCGTCGATCTCGACTGGAAACGGGTGCCGCCCCATTGGTCACCATTGGCTGCATCCCTGCGCCACA
GTGTGCCTATTGGCCTGATCAATC-ATCGATCAACCTGCAGTTCCGGTCGGTCTGGGAGAAAGATCGCGACGGCGCATGC
CTCAGGTATTCGAACCGGTAGGTGAAAATTTCAGAGGAA------C------ATTTCCGCGTGTT-CTTCTATGATATTT
TCTGCCTTTCACACCAACCCGGCCATTGGACGATTATA--AAGTCATGGGACGAACTATAAACAA---------CACATA
CTCCTCTGTTCGGAGTAGAAAAGTTTGGTAGCAACTCTCGAACAACACGTTTTCAAAAAGAAAAGTAAGCTTAGTTTTAT
AAT------GTACACCTAATATTCCTCTTCTTGTACACATACA--TCCCGTGCGCATTCCGGATGTTGGTAGCATAATTC
GTTGAGTATCTGCCTGGTACAGCCATTTCATCACCAGTGCTAATCAACCATGCAAACATGTTTGATCCTTAG--------
--TAGTTTCTACCACTACCAGTAAAGAGCTTAGTGGTTGATATACATTTAGAAGTAC--AAGAAACCTTCTACCAGGTAG
AGCATGTCAGATTTTTGTTCTCGACCGTCCAGAATTTTTTTTCTCTGAAAATCGAGTGAGCACCACAAATCGTCCAGGCT
TGCGTTCATTCAGTATGGG-CCGCTTATAATCTTGCTCGTACTGCTACCAGTTAAGG-CTTACTGATTGTTGTACGTTTA
GAATTAAAAGAAACTGCAAAATACAACACTGGTGCTTGAACTTGTCACGAATGTGCACTTTAGTGCCTGAACTTGCAAAA
TACATTGAACTGGTTTCACAACTTAGCATGGACGTGCATATACGGTTCAAATCTTGTTTTTATACGTCCATGGCGCTGAC
GAGGCACGCCAGGATGTAAGAGAAAAGGCATGTGGCCTGTTTTTTTTTTGCAGAAAACCCTCTAGAATATTTTTTTTCTT
ACAAAAGGCCCTCAAAGAGAAACTGATAAATTAAAAAAATCTATTAATATATTAATAATTAAAACTGGTCCGGGTTTTGA
ACCACACGCGCAGGTGTGCATGGTTAGCCAATAAGCAATACACTTTATAAACTTTGTAAACATTTATAAACATATTATAA
ACATAAACATATTATAAACTTTATAAACATATTTATAAGCAATACCCATTCAAATTTAGTGTCAAGAATGGATTCATACA
CTTTATAAACATAAAGCTGAACAACATAAATTAAAAAAATTATTCCAACAATACACTGTCATTGGTTTGAACCTGCAACC
AGGGGCTATATGGCCGCACATTCCACTCCAACTGGTGACATCGAATGGTAAAACGATAAATTTAGGTTTATAACATAACG
AGCCCGTGTGGCTAAAATGGACCACAGTGTGGCTCAGTTTTCAACGGGTTTGTTCTTTTTCATTACATTTTTCTAAAAAT
TACTTAAATTATTATCACGTTACAAAAAATATACATATATTTAAAACAAATTACGTTAAAATTTCATATCATTTCATAAA
ATACCCATGCAGTAATTTAACAGAAATACACATAATAAAATTAAAAATTAAGAATATAATTTATAATTTGAAAGAATGTT
CGCATTTTAATAAAAAATAAAAGTAATTTTATAAATGTTCATATATTTAAACAAATTCTCATATAATTTTAAAATTTCAC
ATTTTTAACAAACTATTTTTGTAGTATATCAACGTGTTCATGCTTTAAAAAAATTGTGTTGTTTTAATAAGTTTATATAG
TACTCCCTCCGTCCCAAAATAAGCCCAGTGCTAAGCTTCAAACACCTATTTTGAGACGGAGTGAGTATATAAGTTTGTGT
GTTTTCTAAAAAAATACAAGCCCAGTGCGCCATTAGACTATGGATCCTCACATGAATAATACTTGAATCATATAAACATT
TTAGTCATTCATAAATATTTTCAATTTTATGAATATGTTTTGAAATAACACGTGAATTATTTTTAAAGTGACATGAGGAT
TTTTTTCATTATTTTGAAATTATGTTTGTTATACAGTCATAAAGAGTACTTGTACTTTTGATACATGACAACTCAATGGT
TGGAGTGGCATCCGTGCCTATAAGCTTTGGTCCGATGTTCGGGTCACAGATCCGATGGCGTTTTTCCTGGATTATTAAAT
TCTCTTTACTTATTTTGTTCGGCCAAATGTTTATAAAGGTTATGAATCATCAAAGTTGTCGAGTGGCTAGCCGCATGCAC
TCTGACTGGTACGTCGCTTGTTCGATCCAGCACACCAATTTTATTTTTTATCTTATAATTATACTCTAGTTTTTATTTTA
TTATTTATTGATTTCTCCCTGAGGGCCTTATGGTAAGAAAATAACTTCAGTTTTTTTTCCAAAAAACAGGCCACACACCC
TTGTCACTGATAGCGGGCCCCATGGCATGCTGGCCCACCTCCTTAGCTTCACGGACGTATACAAAAACCATTTGAACCGT
ATATGCATGTCCATGCCAAGTTATGGAACCAATTCAATGTATTTTGCAAGTTCAGGCACTAAAGTGCACATCCATGGCAA
GTTCAAACACCATTGGTGTATTTACCTCTTTTAGTTGGTAGAGGCATGACAATCTTTTGCTTTCTACGCACCGTCGACAG
TCCAGCCCCCTTTTCTCTGAAAAAAAATGCCGTAAGCACCTTCAATCGTCCAGGCTTGTGTTT-GTTCA-----------
--------------------------ATTTCTTTGGGG-----AAAGCTTCAATGGTTCTGGCCCT---------GTGCA
GTCCAATCATGGAAAAAATTGGAAGCGACTATGGT-----------------------------------CAGCTGCAGC
AACGATCGTTTTTTCCCACTAATTACGAAGGCTGTTTTGTGGTGAAACAGTAGAACACAGTTTCCTGTATTGTCAGTTTA
CA--AAGGAAAATTGGAAGGTATGGACAATGAAAACAAGG----------------TTCCTGCATTGTCAG--------T
TTCCTTCAGAATTAAGCAGTGGCTGTGGC------------------TG---------TGGCTGTTACAATCCTATGGAC
TCTGTGGTGTGAGTGTGACACATTTGAAAGTAGAGATGAAAGCATATATCTGCATATGTTGAATGATCACAACACTCTTT
GAAGCCTAGATCTTCTATCTATCAGGTTTGAGATACCATCCTCTGTTCCAGTGTGCATGGACTCCGCCATATCTGGAATT
TTTTCGCCTTCACATTGTCCGTTCAATGAGTGCCGCGATTCATGCTGAAATCTTTCTAGCAAGTGACTCGCTTGTTTCAG
GCTGCCCCACTCTCCGCCCAGTTTATATCTTTTATTCCAGGTTTCTTTATCTTCTCCTTAAAAAAAATCT
>SNPs
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------------------------------------------------------------------------S-------
-----S-----S-----S--------------------------------------------------------------
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-------------------------S-S---------------SS-----------------------------------
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-----------------------------------------S--------------------------------------
--------------------S-----------------------------------------------------------
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-----------------------------------------------S--------------------------------
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--------------------------------------SS----------------------------------------
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---------S----------------------------------------------------------------------
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>forward_1024
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-------------------------------------------CTCCCGCTCCCATATAAACCA----------------
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>reverse_2101
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--------------------AGGCCCTGGTAATCGGCA------------------------------------------
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>forward_2042
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-----------------CGCAAGGTATGAATGAATTGAATCT--------------------------------------
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>reverse_3130
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---------TATTCTTGTTCTCGACCGTCCA-------------------------------------------------
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