>input_sequence_47486
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------ATAATTTTCTTTACAGACAGTACTAT------TGGGG
ATAACATGGGCAATATGGAGGGGGAGATGGTTTTCAGGAGAGATAGATGGTTCCCTACTTTATTCAAGTATTAATCGAAT
TTGGATAT-AAACCATAGTTTTAAATAGCGGCCTATGCCAAATAGCGGCCTATAGCGGCAGTCCTCCAAAACAGCTATAG
CCGGCTATTTCATAACTTTACCGGGCAATTCTACAAGAACACCATTTTTTACAATGCCCTGCTCAAACCGCTATAGCTGA
CTATTTAAACTTTCTAAACAACAGAGTTTTTATATGTCCGACAGCTCAAAGAAAGGCTACAGAATGAGTAAATAGAAGTT
GCATGCCTATCTGACTATTGAGTCTACAAGGCCATTTTTAGTTTTAAGCCCATGGATTGTGCCTTTGAGTATATTATTTG
GTATATTACTCAGTTTTCTCTACCTAAATTTTTTGGACAGGTCGTTGGTACGTTCCTGGCAACCACCTCAGACTTTGCAG
TGACATGGTGGTTATTTTCCACTGTCAAAGATTTGTGCCGCACGGAGCTATTGCCCAGAGGAAGTCCATGGACATGCCCC
AGTACTAGAATGATTTACAACGAAATGGTTGTCTGGGGTCTTATTGGACCGAGGCAAATGTTCTTTAAAGGTGTGTACTC
AAAGTTGGTTTATTTCTTCCTGATCGGCATTATTGCGCCAATACCCGTCTGGATCCTTGCTCATCGGTTCCCCTAAAAGA
AGTGGATCAAGCTCATCCTCGTGCCAGTTCTCTTCATGCCAGGGGCCAAAATGCCTCCAGCCAGAGCAGTTAACTACATA
TGTTGGTTCGTGTTGGGATTCATTTTTAACTACATCATCTTCCGGAGATGC-AAAGAGTTGTGGGCAAGGTACAGCTTAC
TCTTCTCCGTCGCCATGGACACCGGCATTGCTGCAATGGCGTTATTGACGATGTTGGTTCTTCAGATGCGAGGCATCAAT
GGCGTCAACTGGTGGGGTTCGTCTGTCTCTGATCATTGCCCTCTAGCCACATGCCCTACCGAACCAGGAGTTTATGTTGA
GGGGTGCCTCCTCGTTCACTAACTAGCATAGTTTGGCTTAGTTTTGTGGTACT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AGTCTGAAATGTTATAGCTTCGATTATGACAATTTTT-TTAAGGTGCTTGCAAAATTTGGTGGCCAAATGAC
ATTCGAGGAGCTCTGAATTTGTTTCCTCAAATGTATGTGCGTTGTTTGAGAAGAATTTGTATTTCATTTTTACGGAAATA
ATTTGATGTTATTTGGCCACCAAACTTTGCAAGCACCTATGACATTTGTTCATAATCAACGCCACGAAATTTTGGTTTTT
TTA-ATATATTTTTTGATTTTACCATTCATCATGGGGTGCGCCGAACTTGGGTGTAGCCACTACGTTCTCAATCAGTTAA
TAATTGTCATCACTGAAAGCTAGGAATATGAATATTGCATGGAAGGAGATTGCATTGCATTACATATCTTATATATATAT
ATAGGTGTGTCTATCTCTACCTAATGCTAACCGAATGCCCGTGCATTGCCACATAAATACGAGAAAGACATAGTTGATTA
AA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------
>chr5D_1_TraesCS5D01G270500
GGCCAGCGAAGCACACAGATAATGATTGTTGTTGTCTGTCATTGGTAAATATACAAGATAATTACAAATGGAATGAGAAA
GGATTGAAAAATGATGATGTTGTCTGTCACAATTACCATACGAGGAAAGGCCAGAGCATCAAAAAGGTCGGAGCATCAAA
AATAAATAGCCAAAGAAAGTTACGAGGAATGATCATCATTAAGGACAATAGAAACACTGTATGAACGTAATCACTAGCAC
GAAGTTGAGGAAAAATCCTTTGAATAGTTCGCTTAACTTCTGAGTCGCAGTTGGTCTCTACGCCGATGGCGCAACAGGTC
ATATAGTGGTGATAAGAGAGCAGTTGTTGTCGTTTGCAAAGAGGGTATTGGTCTCTTCCTCGGAGCTTATGTTGTAATCT
ACGATGGCCTAGTCGAGCCGGCGAGCCTGGAAGCGCATGCATGCAACGAAGTGCTTGCTATGGATCAGGAACTTTACATA
TATATTCAGGATGGTTATTGTGTCTAACTACCTTGAAGTAGTGTCCAACATCAACAATGGAGCCTCGGTAGTTTATGGAG
CGATCCTTGAAGAAATTTACCACACGAAGGAGTTCACTGAAATGGTGTTCCGCTTTGAGCACCGGGAAGCGAATGGTGAA
GCTCATGCGTGGGGAAAGCCTTCTTCCTCGCTTGAGTTTGGCCGGCATGTATGTGTGGTTTGGGACTCCCACCATTTTTT
TATGTATTCCAACTATGTTAAACTTTGAATAAAGTAAGTCCCTTTGCCCCTAAAAATAACTAAGTGTGCTGGTTCGGTCA
TTAATTATAAAAGCTTATCTACCTTGGAGCATACCGCACACATTTACTTATGTTGAATTGTATGCGGCGATACCTCACAC
AATTTTGACTAACCATGTGCAATCCGTGGTTTAGAAAAATGCATAATGTGACATACCAAATGTTCAGCTTATACCTCACC
AGAGCT---ATTAAAACACCAAATGTAAAACAACATGCTAACCATAATTTTCTTTACAGACAGTACTAT------TGGGG
ATAACATGGGCAATATGGAGGGGGAGATGGTTTTCAGGAGAGATAGATGGTTCCCTACTTTATTCAAGTATTAATCGAAT
TTGGATAT-AAACCATAGTTTTAAATAGCGGCCTATGCCAAATAGCGGCCTATAGCGGCAGTCCTCCAAAACAGCTATAG
CCGGCTATTTCATAACTTTACCGGGCAATTCTACAAGAACACCATTTTTTACAATGCCCTGCTCAAACCGCTATAGCTGA
CTATTTAAACTTTCTAAACAACAGAGTTTTTATATGTCCGACAGCTCAAAGAAAGGCTACAGAATGAGTAAATAGAAGTT
GCATGCCTATCTGACTATTGAGTCTACAAGGCCATTTTTAGTTTTAAGCCCATGGATTGTGCCTTTGAGTATATTATTTG
GTATATTACTCAGTTTTCTCTACCTAAATTTTTTGGACAGGTCGTTGGTACGTTCCTGGCAACCACCTCAGACTTTGCAG
TGACATGGTGGTTATTTTCCACTGTCAAAGATTTGTGCCGCACGGAGCTATTGCCCAGAGGAAGTCCATGGACATGCCCC
AGTACTAGAATGATTTACAACGAAATGGTTGTCTGGGGTCTTATTGGACCGAGGCAAATGTTCTTTAAAGGTGTGTACTC
AAAGTTGGTTTATTTCTTCCTGATCGGCATTATTGCGCCAATACCCGTCTGGATCCTTGCTCATCGGTTCCCCTAAAAGA
AGTGGATCAAGCTCATCCTCGTGCCAGTTCTCTTCATGCCAGGGGCCAAAATGCCTCCAGCCAGAGCAGTTAACTACATA
TGTTGGTTCGTGTTGGGATTCATTTTTAACTACATCATCTTCCGGAGATGC-AAAGAGTTGTGGGCAAGGTACAGCTTAC
TCTTCTCCGTCGCCATGGACACCGGCATTGCTGCAATGGCGTTATTGACGATGTTGGTTCTTCAGATGCGAGGCATCAAT
GGCGTCAACTGGTGGGGTTCGTCTGTCTCTGATCATTGCCCTCTAGCCACATGCCCTACCGAACCAGGAGTTTATGTTGA
GGGGTGCCTCCTCGTTCACTAACTAGCATAGTTTGGCTTAGTTTTGTGGTACT---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AGTCTGAAATGTTATAGCTTCGATTATGACAATTTTT-TTAAGGTGCTTGCAAAATTTGGTGGCCAAATGAC
ATTCGAGGAGCTCTGAATTTGTTTCCTCAAATGTATGTGCGTTGTTTGAGAAGAATTTGTATTTCATTTTTACGGAAATA
ATTTGATGTTATTTGGCCACCAAACTTTGCAAGCACCTATGACATTTGTTCATAATCAACGCCACGAAATTTTGGTTTTT
TTA-ATATATTTTTTGATTTTACCATTCATCATGGGGTGCGCCGAACTTGGGTGTAGCCACTACGTTCTCAATCAGTTAA
TAATTGTCATCACTGAAAGCTAGGAATATGAATATTGCATGGAAGGAGATTGCATTGCATTACATATCTTATATATATAT
ATAGGTGTGTCTATCTCTACCTAATGCTAACCGAATGCCCGTGCATTGCCACATAAATACGAGAAAGACATAGTTGATTA
AACAATTGTTCTAATTCAGAAATATGCATTGAACATGACATCATGTGGTTTTTGTTATGGCAATCGCCATGCTCCTTAAC
CATTGTACCTTGCAATATACAAATTCAAATCTTTCTCCCCACTCATATTTCCTCTCCAATCTCCACCTACATTATTTTAA
TTGTGTCTGAGCCCTCTTTTCCAAACCTTGTAATTATACATAT--TATATTTTTTATTGATTCAAAATATTACTTTGATA
TCTTTTTTGGAGATTTGTCAGTTAAATCTTCCGGAGTTGTAATTTAATCGTTCATTTTTCTTATTTTTTTTAT-------
--TTTTTAGTCT---ATTAGTAGTCTTCTCTCATCTG-CCATTTGCTCCAGCATTGTCATTAAAAAGTTCATATAATACC
CCACGCGTTGCAGTGGGAATTGGGTGCAGATATTTCTACAACATTTGGCAGCATGAACCTTTAGTATTTGGATTAGCAAT
ATGATGATAAAAACTAAAGTACATATAATTTATTATATTTGATTATTGTATAGTTCTAGACCATTTGTAAGTAACATGCA
TGGTGCATGTTAAGGTGGATCTTTTCCCATGCATGGTGGCAAGATAGTTGCCATAGTTGCATGTTGAGAAAATAAATAAA
TTTGGTGGAGGTATGCATGATGGCATGGTGAGTTGGCATAGGTCCATCTCAAGATAATTGAGTTAGTGGGATAAACTATT
TAGGTACATAGGATATATTGTTTAAA-------AAAACAATGTAACCATTAATCAAAATCTG---TTTTTTGTATTTTTA
TCATTTAATTCTCTTCATGTATGCCCTACATATTCTTATCCACCCTCAAATTTTGAATGTAAGCAGCCACAATAGTGGTT
TGAGTTAGTAAATGGAAACTCGAGTTAGTAAATGAAAACTCATGACATTATCACAAATAGAAGACTCTACAAATCTTTTA
GTCATGTAGCTGCAAAATCTATGCAAACGAAGATTTTCGGCAAAGAATCTACTGTCTCTCCACCACT
>chr5B_106
--------------------------------------------------------------------------------
-------------------------GTCGCAATTACCATACGAGGAAAGGCCAGAGCATCAAAGAGGCCGGAACATCAAA
AATAAATAGCCAAAGAAAGTTATGAGCAATAATCGTCATTAAGGCCAATAGAAACACTATATGAACATAATCACTAGGAG
GAAGTTGAGAAAAAATCCTTCGAATAGTTCGCTTAACTTCTGAGTCGCTGTTGGTCTCTACGCCGATGGCGCAATAGGTC
ATCTAGTGGTGATAAGGGAGCAGCTGTTGTCGTTTGAAAAGAGGGTATTGGTCTCTTCCTCATAGCTTATGTTGTAATCT
ACGATGGCCTAGTCGATCCGGCAAGCCTGGAAGCGCATGCGTGAAACGAAGTGCTTGCTATGGATCAGGACCTTTACATA
TATATTCAGGATGGTTACTGTGCCTAACTACCTTGAAGTAGTGTCCAACATCAACAATGAAGCCTTGGTAGTTTATGGAG
CGATCCTTGAAGAAATATACCACAGGAAGGAGTTCATTGACGTGGTGTTCTGCTTTGAGCACCGGGAATCGAATGGTGAT
TCTCATGCGTGGGGAAAGGCTTCTTCCTCGCTTGAGTTTGGCCGGCATGTATGCGTGGTTTGGGACTCCCACCATTTTTT
CATGTATTCCAACTATGTTAAGCTTTGAATAAATTAAGTCCCTTTGCCGCTAAAAATAACTAAGTGTGTTGGTTCGGTCA
TTAATTATAAACGGTTATCTACCTTGGAGCATGCCGCACACATTTACTTATGTTGAATTGTATGCGGCGACACCACACAC
AATTTTGACTAACCATGTGCAATTCGTGGTTTTAAAAAATGCATTATGTGACATACCAAATGTTCGGCTTATATCTCACA
GAGCTATTAATTAAAACACCAAATGTAAAACAACATACTAACCATAATTTTCTTTACAATCAGTACTAGTACTACTGGGG
ATAACATGGGCAATATGTAGGAGGAGATGGTTTTCGGAAGAGATAGATGGTTCCCTACTTTATTCAAGTATTAATCGAAT
ATGGATATAAAACCATAGTTTTAAATAGCGGCCTATGTCAAATAGCGACCTATAGCGGCAGTCCTCCAAAACAGCTATAG
CCGGCTATTTCATAACTTTACCGGACAATTCTACAAGAACACCATTTT--ACGATGCCCTGCTCAAACCGCTATAGCTGA
CTATTTAAACTTTCTAAACAACAGAGTTTTT-TATGTCCGACGGCTCAAAGAAAGGCTACAGAATGAGTAAATAGAAGTT
GCATGCCTATCTGACTATTGAGTCTACAAGGCCATTTTTAGTTTTAAGCCCATGGATTGTGCCTTTGAGTATATTATTTG
GTACCTAGCTCAGTTTTCTCTACCTAAATTTTTTGGACAGGTCATTGGTACGTTCCTAGCAACCACCTCAGACTTTGTAG
TGACATGGTGGTTATTTTCCACTGTCAAAGATTTGTGCCGCACGGAGCTATTGCCCAGAGGAAGTCCATGGACATGCCCC
AGTACCAGAATGATTTACAACGAAATGGTTGTTTGGGGTCTTATTGGCCCGAGGCAAATGTTCTTTAAAGGTGTGTACTC
AAAGTTGGTTTATTTCTTCTTGATCGGCAATATTGCGCCAATACCTGTCTGGATCCTTGCTCGTCGGTTCCCCGAAAAGA
AGTGGATCAAGCTCATCCTCGTGCCAGTTCTCTTCATGCCAGGGGCCAAAATGCCTCCAGCTAGAGCAGTTAACTACATA
TGTTGGTTCGTGTTGGGATTCATTTTTAACTACATCATCTTCCGGAGATGGGAAAGAGTTGTGGGCAAGGTACAGCTTAC
TCTTCTCCGTCGCCATGGACACCGGCATTGCTGCAATGGCATTATTGACGATGTTGGTTCTTCAGATGCGAGGCATCAAT
GGCGTCAACTGGTGGGGTTCATCTGTCTCTGATCATTGCCCTCTAGCCACATGCCCTACCGAACCAGGAGTTTATGTTGA
GGGGTGCCCCCTCGTTCACTAACTAGCATAGTTTGGCTTAGTTTTGTGGTACTAGTTTGAATAAAATAATGGTTTTGCTG
CCAGCCGAGCAACATTTTAATTACATTGTGTAATCAACATTGTACCGAAGTTATTTGTGGATCAAATGTTGCCATGCATC
AAAATCAGTCAGAGGATGTTTTT-CTATACCCCGGGTGGATGCACCCACACTACACCCATGACCAAAAACATATCAAAAC
AAATAAAAAGTCTGAAGTATTGTAGCTTCGATTATGACAAAAAAAATTAAGGTGCTTGCAAAATTTGGTGGCCAAATGAC
ATCCGACGAGCTCCGAATTTGTTTCCTCAAATGTATGTGCACTGTTTGAGAAGAATTTGTATTTCACTTTTACGAAGATA
ATTTGATGTTATTTGGCCACCAAACTTTGCAAGCACCTATGAAATTCGTTCACAATCAATGCCACGAAGTTTTGGTTTTT
TTATATATTTGTTTTGATTTTACCATTCATCATGAGGTGCACCGAACTTGGGTGTAGCCACTACGTTCTCAGTCAGTTAA
TAATTGTCATCACTGAAAGCTAGGAATATGAATATTGCATGGAGAGAGATTGCATTGCATTACATATCTTATATCTATC-
---------TCTATCTCTACCTAATACCAACCGAATGCCCGTGCATTGCCACATAAATATGAGAAATACATAGTTGATTA
AACAATTGTTCTAATTCAGAAATATGCATTGAACATGACATCATGTGGTTTTTGTTATGGCAATCGTCATGCTCCTTAAC
CATTGTACCTTGCAATATACAAATTCACATCTTTCTACCCACTCCTACTTCCTCTCCAATCTCCACCTACATTATTTTCA
CTGTGTCTGAGCCCTCTTTTCGAAACCTTGTAATTATACATATCATATATTTTTTATTGATTCAAAATATTACTTTGATA
TCTTTTTTGGAGATTTGTCAGTTAAATCTTCTGGAGTTGTAATTTGATCGTTCA-------------TTTTTTCATTTTT
CATTTTTATTCTATAATTAGTAGTCTTCTCTTCATCCACCATTTGCTCCAGAATTGTCATTAAAAAGTTCACAAAATACC
GCACGCGCTGCAGTGGGAATTGGGTGCAGATATTTCTAAGACATTTGGCAGCATGAAACTTTAGTATTTGGATTAGCAAT
ATGATGATAAAAACTAAAGTACATATAATATATTATTTTTGATTATTATATAGTTCTATACCATTTGTAAGTAACATGCA
TGGTGCATGTTAAGGTGGATATGTT-CCATGCATGGTGGCATGATAATTGCCATAGTTGCATGTTGAG--AAAAAATGAA
TTTAGTGGAGGTATGCATGATGCCATGGTGAGTTGCCATAGTTCCATGCCAAGATAATTGAGTTAGTGGGATAAACTATT
TAGGTATATAGGATATATTGTTATGAAAAAAACAAAACAATGTAACCATTAATCAAATTTAG---TTTTTTGTATTTTTA
TCATTTAATTCTCTTCGTGTATGCCCTACATGTTCTTCTCCACACTCAAATTTTGAATGTAAGCAGCCACAATAGTGGTT
TGAGTTAGTAAATGGAAACTCGTA--------------------ACTTTATCACAAATAGAAGACTCTACAAATCTTTCA
GTCATGTAGCTGCAAAATCTATGCAAACGTAGATTTTTGGCAAAGAATCTAGTGTCTCTCCACCA--
>chr5A_562
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-GATCCTTGAAGAAATGTACCACGGGAAGGAGTTCACTGACGTGGTGTTCCGCTTTGAGCACCGGGAAGCGAATGGTGAA
GCTCATGTGTGCGGAAAGGCTTCTTCCTCGCTTGAGTTTGGTCGGCATGTATGTGTGGTTTGGGACTCCCACCATTTTTT
CATGTA-TCCAACTATGTTAAACTTTGAATAAATTAAGTCCCTTTGCCCCTAAAAATAACTAAGTGTGTTGGTCCGGTCA
TTAATTATAAACGGCTATCTGCCTTGGAGCATACCGCACACATTTACTTATGTTGAATTGTATGCGGCGACACCTCACAC
AATTTTGACTAACCATGTGCAATCCGTGGTTTTAAAAAATGCATTATGTGACATACCAAATGTTCGGCTTATATCTCACC
AGGGCT---ATTAAAACACCAAATGTAAAACAACATGCTAACCATAATTTTCTTTACAGTCAGTACTAT------TGGGG
ATAACATGGGCAATATGGAGGTAGAGATGGTTTTCGTGAGAGATAGATGGTTCCCTGCTTTATTCAAGTATTAATTGAAT
TTGGATATAAAACCATAGTTTTAAATAGTGGCATATGCCAAATAGCGGT----------AGTCCTCCAAAACAGCTATAG
CCGGCTATTTCATAACTTTACCGGACAATTCTACAAGAACACCATTTT--ACGATCCCCTGCTCAAACCGCTATAGCTGA
CTATTTAAACTTTCTAAACAACAGAGTTTT--TATGTCCGACAGCTCAAAGAAAGGCTACATAATGAGTAAATAGAAGTT
GCATGTCTATCTAACTATTGAGTCTACAAGGCCATTTTTAGTTTTAAGCCCATGGATTGTGCCTTTGAGTATATTATTTG
GTATCTTACTCAGTTTTGTCTACCTAAATTTTTTGGACAGGTCATTGGTACGTTCCTGGCAACCACCTCAGACTTTGTAG
TGACATGGTGGTTATTTTCTACTATCAAAGATTTGTGCCGCACGGAGCTATTGCCCAGAGGAAGTCCATGGACATGCCCC
AGTACCAGAATGATTTACAACGAAATGGTTGTTTGGGGTCTTATTGGACCGAGGCAAATGTTCTTTAAAGGTGTGTACTC
AAAGTTGGTTTATTTCTTCTTGATCGGCATTATTGCGCCAATACCTTTCTGGATCCTTGCTCGTCGGTTCCCCGAAAAGA
AGTGGATCAAGCTCATCCGCGTGCCAGTTCTCTTCATGCTAGGGGCCCAAATGCCTCCAGCTAGAGCAGTTAACTACATA
TGTTGGTTTGTGTTGGGATTCATTTTTAACTACATCATCTTCCGAAGATGC-AAAGAGTTGTGGGCAAGGTACAGCTTAC
TCTTCTCCGTCGCCATGGACACCGGCATTGCTGCAATGGCGTTATTGACGATGTTGGTTCTTCAGATGCGAGGCATCAAT
GGCATCAACGGGTGGGGTTCGTCTGTCTCTGATCATTGCCCTCTAGCCACATGCCCTACCGAACCAGGAGTTTATGTTGA
GGGGTGCCCCCTCGTTCACTAACTAGCATAGTATGGCTTAGTTTTGTGGTACTAGTTTGAATAAAATAATGGATTTGCTA
CCAGCCGAGCAACATTTTAATTACATTGTGTAAACAACACTGTACCAAAGTTATTTGTGGATCAAATGTTGCCATGCATC
AGAATCAATCAGAGGATGTTTTTTCTATACCCAGGGTGGATGCACCCACACTACACCCATGACCAACAGCATATCAAAAC
AAATAAAAAGTCTGAAACATTGTAGTTTCTATTATGGCAAAAAAT-TTAAGGTACCTGCAAAATTTGGTGGCCAAATGAC
ATCCGAGGAGCTCTGAATTTGTCTCCTCAAATGTATGTGCACTATTTGAGAAGAATTTGTATTTCATTTTTACGGAGATA
ATTTGATGTTATTTGGCCACCAAACTTTGCAAGCACCTATGACATTTGTTCATAATCAATGCCACGAAGTTTCGGGTTTT
TTATATATTTGTTTTGATTTTACCATTCATCATGGGGTGCACCGAACATGGGTGTAGCCACTACGTTCTCAGTCAATTAA
TAATTGTCATCACTAAAAGCTAGGAATATGAATATTGCATGGAGGGAGATTGCATTGCATTACATATCTTATATCTATC-
---------TCTATATCTACCTAATACTAACCGAATGCCTGTGCATTGCCACATAAATACGAGAAAGACATAGTTGATTA
AACAATTGTTCTAATTCAGAAATATGCATTGAACATGAGATCATGTGGTTTTTGTTATGGTAATCGTCAAGCTCCTTAAC
CATTGTACCTTGCAATATACAAATTCACATCTTTCTCCTCACTCCTACTTCCTCTCCAGTCTCCACCTACATTATTTTCA
CTATGTCTGAGCCCTCTTTTCGAAACATTGTTATTATACATATTACATATTTTTTATTGATTCAAAATATTACTTCGATA
CCTTTTTTGGAGATTTCTCAGTTAAATCTTCCAGAGTTGTAATTTGATTGTTCA-------------TTTTAT-------
--TTTTTATTCT---ATTAGTAGTCTTCTCTTCATCCTCCATTTGCTCCAGCATTGTCATTAAAAAGTTCACATAATACC
CCACGCGTTGCAGTGGGAATTGGGTGCAGATATTTCTATGACATTTGACAGCATGTAACTTTAATATTT-GATTAGCAAT
ATGAGGATAAAAACTAAAGTACATATAATTTATTATATTTGATTATTATATAGTTCTAGACCATTT-TAAGTAACATGCA
TGGTGCATGTTAAGGTGGATCTTTTCCCATGCATGGCGGCAAGATAGTTTCCATAGTTGCATATTGAG--AAAAAATAAA
TTTAGTGGAGGTATGCATGATGGCATGGTGAGTTGGCATAGGTCCATGTCAAGATAATTGAGTTAGTTTGATAAACTATT
TAGGTATATAGGATATAATGTTTAT-AAAAAACAAAACAATGTAACCATTAATCAAAATTTGTTTTTTTTTGTATTTTTA
CCATTTAATTCTCTTCGTGTATGCCCTACATGTTCTTCTCCACCCTCAAATTTTGAATGTAAGCAGCCACAATAGTGGTT
TGAGTTAGTAAATGGAAACTCCAATTAGTAAATGGAAACTCATGACATTATCACAACTAGAAGACTCTACAGATCTTTCA
GTCATGTAGCTGCAAAATCTATGCAAACGTAGATTTTCGGCAAAGAATCTAGTGTCTCTCCACCACT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS---S----------------------------------S---S----S-------
----------------------S---S---S---S---------S-------------S-------S----------S-S
---------S----------S---------------------------S-------------------------S-----
--S-------------S------S------------S------------------------SS-----------------
----------------S-----S-----------------S--S--------------------------S---------
-----------------S----S------------------------------------S-----S--------------
----------------S-------S---------------SS--------------------------------------
------------------S-------------------------------------------------------------
S--------------------------------S----------------------------------S-----------
-----------S-S--------------------------------------------------------S---------
--------------------------------SS----------S--------------------S-------S------
--S--------------------------------------------------------S--------------------
---------------------S-------------S--------------------------------------------
--------------------------------------------------------------------------------
------------------------S-----------------------SS--S---------------------------
-------------------------------S------------------------------------------------
--------------------------------------------------------------------------------
----S--------------------------------------S---------------------------------S--
--------------------------------------------------------------------------------
-----S--------------------------S-----------------------------------------------
-------------------S-------------------------S----------------S----------S------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S--S------------------SSSS------------------------------------
--S-------------------------------------SS----------------------------------S---
-----------------------------------------------------------S--------S-----------
--------S-S-----------------------------S------------------------------S--------
-------------------------------------------S------------------------------S---SS
SSSSSSSSS----------------S------------------------------------------------------
------------------------------------------------------------------S-------------
---------------------------S----------------S--S------------------------------S-
S--------------------S----------------------------------------------------------
---------------------------------------------S--------SSSSSSSSSSSSS-------------
--------S----------------------SSSSSS----------------------------------S--------
--------------------------------------SS-----------------S----------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------SS--S-------
---S-------------------------------------------S--------------------------------
------S-----------------S----------------------------------S--------------------
----------------S--------------S-----S------------------------------------------
-----------------------S----------S-------------------------------------------S-
-----------------------------S---------------------S---------------
>forward_323
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CGATGGCGCAACAGGTC
ATA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
>reverse_1484
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------GTTGGTACGTTCCTGGCAAC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------
>forward_1076
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------GGAGGGGGAGATGGTTTTCA--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>reverse_3192
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------TATAATACC
CCACGCGTTGCA--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------
