>input_sequence_47462
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------------------------------------------CGGACCAGCGCCAAGTACATCCATTGGCCACCCACCCA
CCC-ACACACGA-CCTCCACCCCCACTCCACTCCAC-----GAGTAGCTAGCTAGCCAGCAAGAGAGTCCCAGGGGGCGA
CCAGCTGCCACTGCTCCTCCCCTAGAGGCACTCAGGCGAGCTAGG----CTGCCTGCGGCGGCCTGCCGGTACGCGGGGA
GAAGGCCAA------------------GAGGCTCGTGAGGACAATGCATGGCATGTGTTAACATGTACAACCCGGAGCAC
CACCA---GTCGTCCTTCATGGCGCCGCGGATGTCCTTCTCCAGCGACTTCGCGCTGGAGCCGCCGCCCGCGTCGGCGCT
GTCGGCGCGCGGGCCCGGGGACGCCGACTTCGAGTTCTCCGTCGGCAGCCGCCCCATGATGGCCGCCGACGAGCTCTTCT
CCAAGGGCCGCCTCCTGCCGCTCCGGGAGGCCCCGCACGGCCAGCCCGGCCGGCCCACCACGCTGCGCGAGGAGCTGCGC
GCCGACGACCGCCACGGCCGCGCGCCCCGCGCGCCCAACATCCGGTGGAAGGAGCTGCTCGGCTTCAAGAAGGCGAACAA
GAAGGCCGCCGCCGCCGCAGCCGCCGACGCTGCTGGCGCCGGCACGTCGTCGGCCGAGGCCCATACGGTAATTACCACTA
ATTAATCTTATAGCTTA----TCTTAAGCACCCAGCTCGTAGTGG---TAGTAGTAGCACACTGCATCGTACGCTGTGCA
ATAGTGGTATGCATTGTCCCATCTGCCCGTCGCATTTGACATTTTCCGAATCTTCAGAACCACCTGCGAGCTCGCTCTCT
CTCGCGCGCGCAGAGGAGCACGTAGTACCGTCCAGAGTACATTTCATCTGCATCCAGGGCCGGATTTTCTTAAAGTCTGG
AGCCGGATATATGC-----ATCGCATATTCTAGGCATGTGTACTTGGCAACAGAGCGAACGTGTGCGCCACACCAGCCAT
GCCCCATGCATTCATCTTGCACAGAGTTCTAGCGGCACATTCATATCACCTGTGCTCCCTTCCGGTTTCAGTGACAGCAA
ACGCGTGCAACATTTTTCAGGATCCCGGAGGCCAAGGCGGCACGAGACAGTGAAGCAGCGAGCTCGCGCTCATTCAGCAA
GCGAAATGGGGACATGATTAGGCGAGTAGTCTGTGAGATTGGGTGGTGATTTGAGCTTCCAGCT--TTGATGTCCATCAT
CTGCCC--GTTGAGGATCGATCGGCAGGCAGCCCAACATCCACCAGCGCTTCATTGGAGAAGCAG---GCAAACACAAGC
TG----TAGCTCTGGAGGCCATGCATGCGCTCATGTGCACTTCCTTTTTCTTAA--------------------------
-----------ATTTTGGTGTGGTAAAAGGGGATTTTTGCTCTTTAGCTAGCTCTTGGGTCTGGTCTGGTCGTCGGCGGG
TGGGTGTCAAGGATGGTTTCGC-ATGTCGTAGCAGTAGCGGTCAAAGTAACTCCTCTCT--AGTCTCTAGC---------
-----CTAGAT---GTGGCTCTGAATGTTTTGTATCGGA---AGGGGCCAGTTAAATGCACTGGTACTAGTATTTTTTTT
TCCCCTCTCACATGGTGAATTGGTGATGGATGGTGTGGTGGTCCTTGGTGTGGTAGTAGTAGTAGTACGTGC--------
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>chr5A_1_TraesCS5A01G239200
CAAATTGTTTTCTTCTTCAACTAAATTTAACCTCTCGACAA-TAGGGTCGGTTGGCATTTCCGATTCACATACATCCTAG
ATAAATAAAATCTATGTCACGTTGGTCGGCATAATTTTCATAAACAATAAATGAACCAATAGTTATAAAGATAATATACA
TACCAAATCCGAATCATAGACAGGACGAGGGCCGACGGGGGCGGATACCAAAACCATCGCACTATATAAGATGCAATAAT
AAATGTAAGAAAATGATACAAGTATCTATCTAAACATACAAGTAAGAATATTTTTCCTTTCAGAAAGAAGATAAGAACAA
GAGGCTCACCACGGTGGTGTCGGTGATGAGATCGGCGCGGGTGATCGACGGCGGTGAAGACGGGGACGGGGCGTGACGGA
CCGCTAAATCTAGACAAATCTCGAGGAAAATGGAGCTTGGAGGTCGAGCTTCGAGAGGAGAAAGCTTAAGTAGTGTGGCT
CGGGCATTCCATCAAACACCTCATGTGCATAGGAGGTGAGCTAGAGCACCACAAAGCCCTCTCCCCCTCGGCCAGAAAAA
ACAGAGCATTGTGCTCTGCTCTTGCGCGAGGGGGTATATATAGGCACCTCATTGGTCCCGGTTGGTGGCATGAACCGGGA
CTAAAGGGGAGCCTTTGGTCCCGGTTCAAGCCACCAACCGGGATCAATGGTGGTGGGCCAGGAGCGAGGCCTATTGGTCC
CGGTTCGTCCCACCAACCGGGACCAAAAGGTCCAGACGAACCGGGACCAATAGCCCACGTGGCCCGGCCGGCCCCCTGG-
CTCACGAACCGGGACAAATGCCCATATTAGTCCCGGTTCTACACTGAACCGGGACTAATGGGCTGAACCGGCCTGAACCA
TAGCCCTGTTTTCTACTAGTCTCCTCACTCCTCCCGGCCGCGGCCAGCCTCGCTCCCTCCCTCACTCCCCATCCCGCTAT
ATAACTCCCAGCCCCACGCACCACTCATCACTCACCTCGCAACGGACCAGCGCCAAGTACATCCATTGGCCACCCACCCA
CCC-ACACACGA-CCTCCACCCCCACTCCACTCCAC-----GAGTAGCTAGCTAGCCAGCAAGAGAGTCCCAGGGGGCGA
CCAGCTGCCACTGCTCCTCCCCTAGAGGCACTCAGGCGAGCTAGG----CTGCCTGCGGCGGCCTGCCGGTACGCGGGGA
GAAGGCCAA------------------GAGGCTCGTGAGGACAATGCATGGCATGTGTTAACATGTACAACCCGGAGCAC
CACCA---GTCGTCCTTCATGGCGCCGCGGATGTCCTTCTCCAGCGACTTCGCGCTGGAGCCGCCGCCCGCGTCGGCGCT
GTCGGCGCGCGGGCCCGGGGACGCCGACTTCGAGTTCTCCGTCGGCAGCCGCCCCATGATGGCCGCCGACGAGCTCTTCT
CCAAGGGCCGCCTCCTGCCGCTCCGGGAGGCCCCGCACGGCCAGCCCGGCCGGCCCACCACGCTGCGCGAGGAGCTGCGC
GCCGACGACCGCCACGGCCGCGCGCCCCGCGCGCCCAACATCCGGTGGAAGGAGCTGCTCGGCTTCAAGAAGGCGAACAA
GAAGGCCGCCGCCGCCGCAGCCGCCGACGCTGCTGGCGCCGGCACGTCGTCGGCCGAGGCCCATACGGTAATTACCACTA
ATTAATCTTATAGCTTA----TCTTAAGCACCCAGCTCGTAGTGG---TAGTAGTAGCACACTGCATCGTACGCTGTGCA
ATAGTGGTATGCATTGTCCCATCTGCCCGTCGCATTTGACATTTTCCGAATCTTCAGAACCACCTGCGAGCTCGCTCTCT
CTCGCGCGCGCAGAGGAGCACGTAGTACCGTCCAGAGTACATTTCATCTGCATCCAGGGCCGGATTTTCTTAAAGTCTGG
AGCCGGATATATGC-----ATCGCATATTCTAGGCATGTGTACTTGGCAACAGAGCGAACGTGTGCGCCACACCAGCCAT
GCCCCATGCATTCATCTTGCACAGAGTTCTAGCGGCACATTCATATCACCTGTGCTCCCTTCCGGTTTCAGTGACAGCAA
ACGCGTGCAACATTTTTCAGGATCCCGGAGGCCAAGGCGGCACGAGACAGTGAAGCAGCGAGCTCGCGCTCATTCAGCAA
GCGAAATGGGGACATGATTAGGCGAGTAGTCTGTGAGATTGGGTGGTGATTTGAGCTTCCAGCT--TTGATGTCCATCAT
CTGCCC--GTTGAGGATCGATCGGCAGGCAGCCCAACATCCACCAGCGCTTCATTGGAGAAGCAG---GCAAACACAAGC
TG----TAGCTCTGGAGGCCATGCATGCGCTCATGTGCACTTCCTTTTTCTTAA--------------------------
-----------ATTTTGGTGTGGTAAAAGGGGATTTTTGCTCTTTAGCTAGCTCTTGGGTCTGGTCTGGTCGTCGGCGGG
TGGGTGTCAAGGATGGTTTCGC-ATGTCGTAGCAGTAGCGGTCAAAGTAACTCCTCTCT--AGTCTCTAGC---------
-----CTAGAT---GTGGCTCTGAATGTTTTGTATCGGA---AGGGGCCAGTTAAATGCACTGGTACTAGTATTTTTTTT
TCCCCTCTCACATGGTGAATTGGTGATGGATGGTGTGGTGGTCCTTGGTGTGGTAGTAGTAGTAGTACGTGCTGGTTGTG
CGCTAG---CTATTCCCATGCTTGTCTGCTACCGCCACGCCTCCTCCGGCCCCGGCCCTCGCTTTGAATCCCTCCC-TCG
CCCGTCTACGAAAATCTCTGCGTGCAGCCGTGGGTTCAATGAA---------GCCTTTGCTTTCGATCGACACTCTGCCG
TCACATGCATGCATGCTGC-----------------TGCATGTCCGTTTTTGAACGCGAGGTAAATGCATGCATGCACGG
AA----CCAGCCGGTCAAAGCTGAGCTGGCCCGTTACAGAGGAAGATTCAAAATAGAGTTTCAAAATACTCCAACGTAGT
ATA----------AGTAAAGTGGAGTGGTACTGAGACCGGG--------CCGCTCTCCTCCAAAGCTGGCGGATTTGTTA
ACAACCCGTCCTCTA----GCGGGGGCTGGGCTGGGCAGTGGAGAGAAGGGAGGGAGGGGGCCTAGCACATCTCCCGCAC
TGTCGTGTAATGCTCGGCGCCCCATCATCCCACCTGGTGGCGATCACCAGCACAGCCTT-AAATTTAATGAGGCGACTTA
GCTGTCAATCGCT-------------------------------------GCCGCTGCGGCGA----------CGGGGCG
GGGCGGACAAAAACAAATGCCTGGCCTGGCCCTGCGTCGCTGCCCGGCACAGTAGTAGCTTGGGGGGAAATGGAAATGGA
GATTCATGGCGGGGGCAGGGCGGGCGGC-----AGCGGGAGCCGAGAGCGGTCGAGGGGGGGCCGGCGCCGGCAGCGAAT
GCAGCAGGCGGGCATGCATGGATCGACCGCTCTGGATGAATTCTGGTTCTGATTTGAAGCCAGCCA----ACTGGCCCAA
GAG----A--------TGGCGGGGCATGCCCTGATCTGATTCTGGGCCGGTGCGTGCGACTGCGTGGTTAGTACAGGCGC
ATGCAGTGGTGCAGTGCAGGGCAGGGCAGTGCAGGCGTGCAGCTGCGTCGCGTGCCCCGGCTTAATGGCCAGGTGCTACC
TCTGCGCCTCCGCGCTCCTGCGCTGCGTGTGTACTGGCTAGGGCTAGGGGGGGTCATCTTGGTCAGATCCTGTTGGA
>chr5A_1
CAAATTGTTTTCTTCTTCAACTAAATTTAACCTCTCGACAA-TAGGGTCGGTTGGCATTTCCGATTCACATACATCCTAG
ATAAATAAAATCTATGTCACGTTGGTCGGCATAATTTTCATAAACAATAAATGAACCAATAGTTATAAAGATAATATACA
TACCAAATCCGAATCATAGACAGGACGAGGACCGACGGGGGCGGATACCAAAACCATCGCACTATATAAGATGCAATAAT
AAATGTAAGAAAATGATACAAGTATCTATCTAAACATACAAGTAAGAATATTTTTCCTTTCAGAAAGAAGATAAGAACAA
GAGGCTCACCACGGTGGTGTCGGTGATGAGATCGGCGCGGGTGATCGACGGCGGTGAAGACGGGGACGGGGCGTGACGGA
CCGCTAAATCTAGACAAATCTCGAGGAAAATGGAGCTTGGAGGTCGAGCTTCGAGAGGAGAAAGCTTAAGTAGTGTGGCT
CGGGCATTCCATCGAACACCTCATGTGCATAGGAGGTGAGCTAGAGCACCACAAAGCCCTCTCCCCCTCGGCCAGAAAAA
ACAGAGCACTGTGCTCTGCTCTTGCGCGAGGGGGTATATATAGGCACCTCATTGGTCCCGGTTGGTGGCATGAACCGGGA
CTAAAGGGGAGCCTTTGGTCCCGGTTCAAGCCACCAACCGGGACCAATGGTGGTGGGCCAGGAGCGAGGCCCATTGGTCC
CGGTTCGTCCCACCAACTGGGACCAAAAGGTCCAGACGAACCGGGACCAATGGCCCACGTGGCCCGGCCGGCCCCCTGGG
CTCACGAACCGGGATCAATGCCCACATTGGTCCCGGTTCTACACTGAACCGGGACTAATGGGCTGAGCCGGCCTGGACCA
TAGCCCTGTTTTCTACTAGTGTCTTCA-----------------------------------------------------
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>chr5A_1
CAAATTGTTTTCTTCTTCAACTAAATTTAACCTCTCGACAA-TAGGGTCGGTCGGCATTTCCGATTCACATACATCCTAG
ATAAATAAAATCTATGTCACGTTGGTCGGCATAATTTTCATAAACAATAAATGAACCAATAGTTATAAAGATAATATACA
TACCAAATCTGAATCATAGACAGGACGAGGGCCGACGGGGGCGGATACCAAAACCATCGCACTATATAAGATGCAATAAT
AAATGTAAGAAAATGATACAAGTATCTATCTAAACATACAAGTAAGAATATTTTTCCTTTCAGAAAGAAGATAAGAACAA
GAGGCTCACCACGGTGGTGTCGGTGATGAGATCGGCGCGGGTGATCGACGGCGGTGAAGACGGGGACGGGGCGTGACGGA
CCGCTAAATCTAGACAAATCTCGAGGAAAATGGAGCTTGGAGGTCGAGCTTCGAGAGGAGAAAGCTTAAGTAGTGTGGCT
CGGGCATTCCATCGAACACCTCATGTGCATAGGAGGTGAGCTAGAGCACCACAAAGCCCTCTCCCCCTCGGCCAGAAAAA
ACAGAGCACTGTGCTCTGCTCTTGCGCGAGGGGGTATATATAGGCACCTCATTGGTCCCGGTTGATGACATGAACCGGGA
CTAAAGGGAAGCCTTTGGTCCCGGTTCAAGCCACCAACCGGGACCAATGGTGGTGGGCCAGGAGCGAGGCCCATTGGTCC
CGGTTCGTCCCACCAACCGGGACCAAAAGGTCCAGACGAACCGGGACCAATGGCCCACGTGGCCCGGCCGGCCCCCTGGG
CTCACGAACCGGGACCAATGCCCACATTGGTCCCGGTTCTAGACTGAACCGGGACTAATGGGCTGAGCCGGCCTGGACCA
TAGCCCTGTTTTCTACTAGTGTTCCTC-----------------------------------------------------
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>chrUn_1
CAAATTGTTTTCTTCTTCAACTAAATTTAACCTCTCGACAA-TAGGGTCGGTTGGCATTTCCGATTCACATACATCCTAG
ATAAATAAAATCTATGTCACGTTGGTC-GCATAATTTTCATAAACAATAAATGAACCAATAGTTATGAAGATAATATACA
TACCAAATCCGAATCATAGACAGGACGAGGGCCGACGGGGGCGGATACCAAAACCATCGCACTATATAAGATGCAATAAT
AAATGTAAGAAAATGATACAAGTATCTATCTAAACATACAAGTAAGAATATTTTTCCTTTCAGAAAGAAGATAAGAACAA
GAGGCTCACCACGGTGGTGTCGGTGATGAGATCGGCGCGGGTGATCGACGGCGGTGAAGACGGGGACGGGGCGTGACGGA
CCGCTAAATCTAGACAAATCTCGAGGAAAATGGAGCTTGGAGGTCGAGCTTCGAGAGGAGAAAGTTTAAGTAGTGTGGCT
CGGGCATTCCATCGAACACCTCATGTGCATAGGAGGTGAGCTAGAGCACCACAAAGCCCTCTCCCCCTCGGCCAGAAAAA
ACAGAGCACTGTGCTCTGCTCTTGCGCGAGGGGGTATATATAGGCACCTCATTGGTCCCGGTTGGTGGCATGAACCGGGA
CTAAAGGGGAGCCTTTGGTCCCGGTTCAAGCCACCAACCGGGACCAATGGTGGTGGGCCAGGAGCGAGGCCCATTGGTCC
CGGTTCGTCCCACCAACTGGGACCAAAAGGTCCAGACGAACCGGGACCAATGGCCCACGTGGCCCGGCCGGCCCCCTGGG
CTCACGAACCGGGACCAATGCCCATATTAGTCCCGGTTCTACACTGAACCGGGACTAATGGGCTGAGCCGGCCTGGACCA
TAGCCCTGTTTTCTACTAGT------------------------------------------------------------
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>chr4A_1
CAAATTGTTTTCTTCTTCAACTAAATTTAACCTCTCGACAA-TAGGGTCGGTTGGCATTTCCGATTCACATACATCCTAG
ATAAATAAAATCTATGTCACGTTGGTCGGCATAATTTTCATAAACAATAAATGAACCAATAGTTATAAAGATAATATACA
TACCAAATCCGAATCATAGATAGGACGAGGGCCGACGGGGGCGGATACCAAAACCATCGCACTATATAAGATGCAATAAT
AAATGTAAGAAAATGATACAAGTATCTATCTAAAGATACAAGTAAGAATATTTTTCCTTTCAGAAAGAAGATAAGAACAA
GAGGCTCACCACGGTGGTGTCGGTGATGAGATCGGCGCGGGTGATCGACGGCGGTGAAGACGGGGACGGGGCGTGACGGA
CCGCTAAATCTAGACAAATCTCGAGGAAAATGGAGCTTGGAGGTCGAGCTTCAAGAGGAGAAAGCTTAAGTAGTGTGGCT
CGGGCATTCCATCAAACACCTCATGTGCATAGGAGGTGAGCTAGAGCACCACAAAGCCCTCTCCCCCTCGGCCAGAAAAA
ACAGAGCACTGTGCTCTGCTCTTGCGCGAGGGGGTATATATAGGCACCTCATTGGTCCCGGTTGGTGGCATGAACCGGGA
CTAAAGGGGAGCCTTTGGCCCCGGTTCAAGCCACCAACCGGGACCAATGGTGGTGGGCCAGGAGCGAGGCCCATTGGTCC
CGGTTCGTCCCACCAACCGGGACCAAAAGGTCCAGACAAACCGGGACCAATGGCCCACGTGGCCCGGCCGGCCCCCTGGG
CTCACGAACCGGGACCAATGCCCACATTGGTCCCGGTTCTACACTGAACCGGGACTAATGGGCTGAGCCGGCCTGGACCA
TAGCCCTGTTTTCTACTAGT------------------------------------------------------------
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>chr4A_1
CAAATTGTTTTCTTCTTCAACTAAATTTAACCTCTCGACAATTAGGGTCGGTTGGCATTTCCGATTCACATACATCCTAG
ATAAATAAAATCTATGTCACGTTGGTCGGCATAATTTTCATAAACAATAAATGAACCAATAGTTATAAAGATAATATACA
TACCAAATCCGAATCATAGACAGGACGAGGGCCGACGGGGGCGGATACCAAAACCATCGCACTATATAAGATGCAATAAT
AAATGTAAGAAAATGATACAAGTATCTATCTAAACATACAAGTAAGAATATTTTTCCTTTTAGAAGGAAGATAAGAAAAA
GAGGCTCACCACGGTGGTGTCGGTGATGAGATCGGCGCGGGTGATCGACGGCGGTGAAGACGGGGACGGGGCGTGACGGA
CCGCTAAATCTAGACAAATCTCGAGGAAAATGGAGCTTGGAGGTCGAGCTTCGAGAGGAGAAAGCTTAAGTAGTGTGGCT
CGGGCATTCCATCGAACACCTCATGTGCATAGGAGGTGAGCTAGAGCACCACAAAGCCCTCTCCCCCTCGGCCAGAAAAA
ACAGAGCACTGTGCTCTGCTCTTGCGCGAGGGGGTATATATAGGCACCTCATTGGTCCCGGTTGGTGGCATGAACCGGGA
CTAAAGGGGAGCCTTTGGTCCCGGTTCAAGCCACCAACCGGGACCAATGGTGGTGGCCCAGGAGCGAGGCCCATTGGTCC
CGGTTCGTCCCACCAACCGGGACCAAAAGGTCCAGACGAACCGGGACCAATGGCCCACGTGGCCCGGCCGGCCCCCTGGG
CTCACGAACCGGGACCAATGCCCACATTGGTCCCGGTTCTACACTGAACCGGGACTAATGGGCTGAGCCGGCCTGGACCA
TAGCCCTGTTTTCTACTAGT------------------------------------------------------------
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>chr1A_1
CAAATTGTTTTCTTCTTCAACTAAATTTAACCTCTCGACAA-TAGGGTCGGTTGGCATTTCCGATTCACATACATCCTAG
ATAAATAAAATCTATGTCACGTTGGTCGGCATAATTTTCATAAACAATAAATGAACCAATAGTTATAAAGATAATATACA
TACCAAATCCGAATCATAGACAGGACGAGGGCCGACGGGGGCGGATACCAAAACCATCGCACTATATAAGATGCAATAAT
AAATGTAAGAAAATGATACAAGTATCTATCTAAACATACAAGTAAGAATATTTTTCCTTTCAGAAAGAAGATAAGAACAA
GAGGCTCACCACGGTGGTGTCGGTGATGAGATCGGCGCGGGTGATCGACGGCGGTGAAGACGGGGACGGGGCGTGACGGA
CCGCTAAATCTAGACAAATCTCGAGGAAAATGGAGCTTGGAGGTCGAGCTTCGAGAGGAGAAAGCTTAAGTAGTGTGGCT
CGGGCATTCCATCGAACACCTCATGTGCATAGGACGTGATCTAGAGCACCACAAAGCCCTCTCCCCCTCGGCCAGAAAAA
ACAGAGCACTGTGCTCTGCTCTTGCGCGAGGGGGTATATATAGGCACCTCATTGGTCCCGGTTGGTGGCATGAACCGGGA
CTAAAGGGGAGCCTTTGGTCCCGGTTCAAGCCACCAACCGGGACGAATGGTGGTGGGCCAGGAGCGAGGCCCATTGGTCC
CGGTTCGTCCCACCAACCGGGACCAAAAGGTCCAGACAAACCGGGACCAATGGCCCACGTGGCCCGGCCGGCCCCCTGGG
CTCACGAACCGGGACCAATGCCCACATTGGTCCCGGTTCTACACTGAACCGGGACTAATGGGCTGAGCCGGCCTGGACCA
TAGCCCTGTTTTCTACTAGT------------------------------------------------------------
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>chr1A_1
CAAATTGTTTTCTTCTTCAACTAAATTTAACCTCTCGACAA-TAGGGTCGGTTGGCATTTCCGATTCACATACATCCTAG
ATAAATAAAATCTATGTCACGTTGGTCGGCATAATTTTCATAAACAATAAATGAACCAATAGTTATAAAGATAATATACA
TACCAAATCCGAATCATAGACAGGACGAGGGCCGACGGGGGCGGATACCAAAACCATCGCACTATATAAGATGCAATAAT
AAATGTAAGAAAATGATACAAGTATCTATCTAAACATACAAGTAAGAATATTTTTCCTTTCAGAAAGAAGATAAGAACAA
GAGGCTCACCACGGTGGTGTCGGTGATGAGATCGGCGCGGGTGATCGATGGCGGTGAAGACGGGGACGGGGCGTGACGGA
CCGCTAAATCTAGACAAATCTCGAGGAAAATGGAGCTTGAAGGTCGAGCTTCGAGAGGAGAAAGCTTAAGTAGTGTGGCT
CGGGCATTCCATCGAACACCTCATGTGCATAGGAGGTGAGCTAAAGCACCACAAAGCCCTTTCCCCCTCGGCCAGAAAAA
ACAGAGCACTGTGCTCTGCTCTTGCGCGAGGGGGTATATATAGGCACCTCATTGGTCCCGGTTGGTGGCATGAACCGGGA
CTAAAGGGGAGCCTTTGGTCCCGGTTCAAGCCACCAACCGGGACCAATGGTGGTGGGCCAGGAGCGAGGCCCATTAGTCC
CGGTTCGTCCCACCAACCGGGACCAAAAGGTCCAGACGAACCGGGACCAATAGCCCACGTGGCCCGGCCGGCCCCCTGGG
CTCACGAACCGGGACCAATACCCACATTGGTCCCGGTTCTACACTGAACCGGGACTAATGGGCTAAGCCGGCCTGGACCA
TAGCCCTGTTTTCTACTAGT------------------------------------------------------------
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>chr6A_1
CAAATTGTTTTCTTCTTCAACTAAATTTAACCTCTCGACAA-TAGGGTCGGTTGGCATTTCCGATTCACATACATCCTAG
ATAAATAAAATCTATGTCACGTTGGTCGGCATAATTTTCATAAACAATAAATGAACCAATAGTTATAAAGATAATATACA
TACCAAATCTGAATCATAGACAGGACGAGGGCCGACGGGGGCGGATACCAAAACCATCGCACTATATAAGATGCAATAAT
AAATGTAAGAAAATGATACAAGTATCTTTCTAAACATACAAGTAAGAATATTTTTCCTTTCAGAAAGAAGATAAGAACAA
GAGGCTCACCACGGTGGTGTCGGTGATGAGATCGGCGCGGGTGATCGACGGCGGTGAAGATGGGGACGGGGCGTGACGGA
CCGCTAAATCTAGACAAATCTCGAGGAAAATGGAGCTTGGAGGTCGAGCTTCGAGAGGAGAAAGCTTAAGTAGTGTGGCT
CGGGCATTCCATCGAACACCTCATGTGCATAGGAGGTGAGCTAGAGCACCACAAAGCCCTCTCCCCCTCGGCCAGAAAAA
ACAGAGCACTGTGCTCTGCTCTTGCGCGAGGGGGTATATATAGGCACCTCATTGGTCCCGGTTGGTGGCATGAACCGGGA
CTAAAGGGGAGCCTTTGGTCCCGGTTCAAGCCACCAACTGGGACCAATGGTGGTGGGCCAGGAGTGAGGCCCATTGGTCC
CGGTTCGTCCCACCAACCGGGACCAAAAGGTCCAGACGAACCGGGACCAATGGCCCACGTGGCCCGGCCGGCCCCCTGGG
CTCACGAACCGGGACCAATGCCCACATTGGTCCCGGTTCTACACTGAACCGGGACTAATGGGCTGAGCCGGCCTGGACCA
TAGCCCTGTTT-CTACTAGTCACC--------------------------------------------------------
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>chr6A_1
CAAATTGTTTTCTTCTTCAACTAAATTTAACCTCTCGACAA-TAGGGTCGGTTGGCATTTCCGATTCACATACATCCTAG
ATAAATAAAATCTATGTCACGTTGGTCGGCATAATTTTCATAAACAATAAATGAACCAATAGTTATAAAGATAATATACA
TACCAAATCCGAATCATAGACAGGACGAGGGCTGACGGGGGCGGATACCAAAACCATCGCACTATATAAGATGCAATAAT
AAATGTAAGAAAATGATACAAGTATCTATCTAAACATACAAGTAAGAATATTTTTCCTTTCAGAAAGAAGATAAGAACAA
GAGGCTCACCACGGTGGTGTCGGTGATGAGATCGGCGCGGGTGATCGACGGTGGTGAAGACGGGGACGGGGCGTGACGGA
CCGCTAAATCTAGACAAATCTCGAGGAAAATGGAGCTTGGAGGTCGAGCTTCGAGAGGAGAAAGCTTAAGTAGTGTGGCT
CGGGCATTCCATCGAACACCTCATGTGCATAGGAGGTGAGCTAGAGCACCACAAAGCCCTCTCCCCCTCGGCCAGAAAAA
ATAGAGCACTGTGCTCTGCTCTTGCGCGAGGGGGTATATATAGGCACCTCATTGGTCCCGGTTGGTGGCATGAACCGGGA
CTAAAGGGGAGCCTTTGGTCCCGGTTCAAGCCACCAACCGGGACCAATGGTGGTGGGCCAGGAGCGAGGCCCATTGGTCC
CGATTCGTCCCACCAACCGGGACCAAAAGGTCCAGACGAACCGGGACCAATGGCCCACGTGGCCCGGCCGGCCCCCTGGG
CTCATGAACTGGGACCAATGCCCATATTGGTCCCGGTTCTACACTGAACCGGGACTAATGGGCTGAGCCAGCCTGGACCA
TAGCCCTGTTTTCTACTAGT------------------------------------------------------------
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>chr5D_943
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----------------------------------------------------------------CTCCCCATCCCGCTAT
ATAACTCCCAGCCCCACGCACCACTCATCACTCACCTCGCAACGCACCAGCGCCAAGTACATCCATTGGCCACCCACCCA
CCC-ACACACGACCCTCCACCCCCACTCCACTCCACTCCAAGAGTAGCTAGCTAGCTAGCAAGAGAGTCCCAGCGGGTGA
CCAGCTGCCACTGCTGCTCTCCTAAAGGCACTCAGGCGAGCTAGTCGATCTGCCCACGGCGACCTGCCGGCGCGCGGGGA
GGGGGAGGGGGAGCTGGCCGGCCAGTGGGGGCGCGTGAGGACAATGCATGGCATGTGTTAACATGTACAACCCGGAGCAC
CACCAGTCGTCGTCCTTCATGGCGCCGCGGATGTCCTTCTCCAGCGACTTCGCGCTGGAGCCGCCGCCCGCGTCGGCGCT
GTCGGCGCGCGGGCCCGGGGACGCCGACTTCGAGTTCTCCGTCGGCAGCCGCCCCATGATGGCCGCCGACGAGCTATTCT
CCAAGGGCCGCCTCCTGCCGCTCCGGGAGGCCCCGCACGGCCAGGCCGGCCGGCCCACGACGCTGCGCGAGGAGCTGCGC
GCCGACGACCGCCACGGGCGCGCGCCCCGCGCCCCCAACATCCGGTGGAAGGAGCTGCTCGGCTTCAAGAAGGCGAACAA
GAAGGCCGCCGCCGCCGCAGCCGCCGATGCTG---GCGCCGGCACGTCGTCGGCCGAGGCCCACACGGTAATTACC---A
ATTAATCTTATAGCTTAATTATCTTAAGCACCCAACCCGTAGTGG---CAGTAGG---ACACTGCATCGTACGCTCTGCA
ATAGTGGTATGCATTGTCCCATCTGCCCGTCGCATC-GACATTTTCCGAATCTTCAGAGCCACCTGCAACTGCGAGAGCC
TAGCTCTCTTGCGGCGC---CGTAGTACAATCTAGAGTACATTTCCTCTGCATCCAGGGCCGGATTT-CTCAAAGTCTGG
AGCCGCATATATGCATCGCATCGCATATTCTAGGCATGTGTACTTGGCAACAGAACGAACGTGTTCACCACACCACA---
---CCAGCCATGCATCTTGCACAGAGTTTCAGCGGCACA----TATCACCTGCGTTCCTTTCCGGTTTTAGTGACAGCAA
ACGCGTGCAACATTTTTCAGGATCTTGGAGGTCACGGAGGCACGAGAGAGTGAAGCAGCGAGC----GCTCGTTCACCAA
GCGAGACGGGGGCATGGTTAGGCAACTAGTTTGTGCGATTGGGTGGTGATTTGCCTCTCAGCTAGCTTGACGTCCATCAT
CTACCC--GGTGAAGACGGATCTGCGAGTAACCCAACATCCATCAGCGCTTCATTGGAGAAGCAGCAAGCAAACTGAAGC
TGTAGCTAGCTCTGGAGGCCATGCATGCATCAATGTGCATTTCATTTTACTGCCTGCTGCTTGTTACCCTT-TTTTGTTG
TTATTATTATTATTTCGGTGTAGTAAAAGGGAATTTTTGCTCCTGCTTTAGCTCTTG-----GGTCTGGTCGTCGGCGGG
TGGTTCCATTGCATCGCATGTAGATGTAGTAGTAGTGGTGGTCAAAGTAACTCCTCTCTCTAGTCTCTAGT---------
-----CTAGCTGTAGTGGCTCTGAATGTTTTGTATCGGAGGAAGGGGCCAGTTAAATGCACTAGCAGTATTTATTTTTTC
TC-------ACATGGTGATGGATGCT-----------GTGGTCCTTGTGGTAGTCGTAGTAGTAGTACGTGCTGGTTGTG
CGCTAGTAGCTGTTCCCATGCTTGTCTGCTACCGCCACGCCTCCTCCTG------CCCTCGCTTTGAATCCCTCCCCTCC
CTCGTCTACAAAAATCTCT----------------TCAATGAAGCCAGGCCGGCCTTTGCTTTCGATCGACACTCTGCCG
CCACATGCATGCATGCTGCTGCTTCTGGTACAGAAGTGCATGCCCGTTTTTGAACGGGGCGG---TGACCGCATGCACGG
AGCTAGCCGGCCGGTCAAAGCTGAGCTGGCCCGTTACGGAAG-------------GAGATTCAAAATACTCCAACGTATA
AGTAAAGTAGAGTGG-AGTGTGGAGTGGTTCTGAGACAGTGAGACCGAACCGCTCTCCTCCAAAGCTGGCGGATCTGTTA
ACAACCCGTCCACTAGCGCGCGGGGGCTGGACT------------------------GGGGCCTAGCACATCTCCCGCAC
TGTCGTGTAATGCTCCGCGCCCCATCATCCCACCTGGTGGCGATCACCGGCACAGCGTT-AAATTTATTGAGGTGACTTA
GCTGTCTGTCGATCGCTGCCGCGC------------CCGGCCTGCCGGTCGCCGCTGCGGCGGTGGGGCGGGGCGGGGCG
GGGCGGACAAAAACAAATGCCTGCCC-------------CTGCCCGGCACAGTAGTAGCTTGGGGGGAAATGGAAATGGA
GATTCATGGCGGGGGCGGGGGCAGGCGGCAGCTAGCGGGAGCCGAGAGCGATCGAGGGGGGGCCGGCGCCGGCTGCAAT-
---GCAGACGGGCATGCATGGATCGACCGCTCTGGATGAATTCTGGTTCTGATTTGAAGCCAGCCAGCCAACTGGTCCAA
AAGATGTA--------TGGCGGGGCATGCCCTGAT-----TCTGGGCCGGTGTGTGCGACTGCGTGGTTAGTACAGGCGC
ATGCAGTAGTGCAGTGCAGT-----GCAGTGCATGCGTGCAGCTGCGTCGCGTGCCCCGGCTTAAAGGCCAGGTGCTACC
TCTGCGCCTCCGCGCTCC-GCGCTGCGTGTGTACTAGCTAGGGTTAGGGGGGGTCATCTTGGTCAGATCCTGTTGGA
>chr5B_943
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----------------------------------------------------------------CTCCCCATCCTGCTAT
ATAACTCCCAGCCCCACGCACCACTCATCACTCACCTCGCAACGCACCAGCGCCAAGTACATCCATTGGCCACCCACCCA
CCCCACACACGA-CCTCCACCCCCACTACACTCCACTCCGCGAG----TAGCTAGCTAGCAAGAGAGTCCCA--------
---GCTGCCACTGCTCCTCTCCTAGAGGCACTCAGGCGAGCTAC----TCTGCCTGCGGCGGCCTGCCGGCGCGCGGGGA
GGGGGAGT------TGGCCGGCCAGTGGGGGCGCGTGAGGACAATGCATGGCATGTGTTAACATGTACAACCCGGAGCAC
CACCAGTCGTC---CTTCATGGCGCCGCGGATGTCCTTCTCCAGCGACTTCGCGCTGGAGCCGCCGCCCGCGTCGGCGCC
GTCGGCGCGCGGGCCCGGGGACGCCGACTTCGAGTTCTCCGTCGGCAGCCGCCCCATGATGGCCGCCGACGAGCTCTTCT
CCAAGGGCCGCCTCCTGCCGCTCCGGGAGGCCCCGCACGGCCAGAGCGGCCGGCCCACGACGCTGCGCGAGGAGCTGCGC
ACCGACGACCGCCACGGGCGCGCGCCCCGCGCGCCCAACATCCGGTGGAAGGAGCTGCTCGGCTTCAAGAAGGCGAACAA
GAAGGC---CGCGGCCGCAGCCGCCGACGCC---GGCGCCAGCACGTCGTCGGCCGAGGCCCACACGGTAATTA------
----ATCTTATAGC----TTATCTTAAGCACCCAGCTCGTAGTAGTTTCAGTAGT---ACACTGCATCGTACGCTCTACA
ATAGTGGTATGCATTGTCCCATCTGCCCGTCGCATT-GACATTTTCCGAATCTTCAGAGCCACCTGCAACTGCAAGAGCC
TAGCTCTCTTGCGGCGC---CGTAGTACAATCTAGAGTACATTTCCCCTGCACCCAGGGCCGGATTT-CTCAAAGTCTGG
AGCCGGATATATGC-----ATCGCATATTCTAGGCATGTGTACTTGGCAACAGAACGAACGTGTTCACCACACCACA---
---CCAGCCATGCATCTTGCACAGAGTTTTAGCGGCACATAG-TATCACCTGCGTTCCTTTCCGGTTTTAGTGACAGCAA
ATGCGTGCAACATTTTTCAGGATCTTGGAGGTCACGGAGGCACGAGAGAGTGAAGCAGCGAGC----GCTCATTCACCAA
ACGAGACGGGGGCATGGTTAGGCAACTAGTTTGTGTGATTGGGTGGTGATTTGCCTTTCAGCTTC----ACGTCCATCAC
CTACCCGCGGTGAAGATGGATCTGCCAGGAACCCAACATCCATCAGCGCTTCATTGGAGAAGCAGCAAGCAAATTGAAGC
TGTAGCTAGCTCTGGAGGCCATGCATGCATGAATGTGCATTTCATTTTACTGCCTGCTGCTTGTTACCCTTTTTTTGTTA
TTATTATTATTATTTCGGTGTAGTAAAAGGGAATTTTTGCTCCTGCTTTAGCTCTTG-----G-TCTGGTCGTCGACGGG
TGGTTCCATTGCATCGCATGTAGAT---GTAGTAGTAGTGGTCAAGGTAACTCCTCTCT--AGTCTCTAGTCTCTAGTCT
CTAGTCTAGGT---GTGGCTCTGAATGTTTTGTATCGGAGGAAGGGGCCAGTTAAATGCAGTAGCAGTATTTATTTTTTC
TC-------ACATGGTGATGGAT---TGGATGGTGTGGTCCTT---------GTGGTAGTAGTAGTACGTGCCGGTTGTG
CGCTAG---CTGTTCCCATGCTTGTCTGCTACCGCCACGCCTCCTCCTGCCCCA------GCTTTGAATCCCTCCCCTCC
CTCGTCTACAAAAATCTCTGCGTGCAGCCTTGAGTTCAATGAAGCCAGGCAGGCCTTTGCTTTCGATCGACACTCTGCCG
TCACATGCATGCATGCTGCTGCTGCTGGTACAGAAGTGCATGCCCGTTTTTGAACGGGGTGG---TGAATGCATGCACGG
AGCTAGCCAGCCGGTCAAAGCTGAGCTGGCCCGTTACAGAAG-------------GAGATTCAAAATACTCCAACGTAAG
TACTCCAAAGTGGAGTAGAGTGGAGTGGTAGTGAGACCGTGAGACCGAACCGCTCTCCTCCAAAGCTGGCGGATTTGTTA
ATAACCTGTCCACTA----GCGGGGGCTGGACT------------------------GGGGCCTAGCACATCTCCCGCAC
TGTCGTGTAATGCTCCGCGCCCCATCATCCCACCTGGTGGCGATCACCAGCACAGCGTTAAAATTTATTGAGGTGACTTA
GCTGTCTGTCAATCACTGCCGCGCCCGGCCCGCGAACCGGCCTGCCGGTCGCCGCTGCGGCGGTGGGGCGGGGCGG----
GGGCGGACAAAAACAAATGCCTGCCC-------------CTGCCCGGCACAGTAGTAGCTTGGGGGGAAATGGAAATGGA
GATCCAT------GGCGGGGGCAGGCGGCAGCTAGCGGGAGCCGAGAGCGATCAAGGGGGGGCCGGCTGCGGCTGCAAT-
---GCAGACGGGCATGCATGGATCGACCGCTCTGGATGAATTCTGATTCTGATTTGAAGCCAGCCA----ACTGGTCCAA
AAG----ATGTATGGCTGGCGGGGCATGCCCTGAT-----TCTGGGCCGGTGTGTGCG------TGGTTAGTACAGGCGC
ATGCAGTAGTGCAGTGCAGT-----GCAG-----GCGTGCAGCTGCGTCGCGTGCCCCGGCTTAAAGGCCAGGTGCTACC
TCTGCGCCTCCGCGCTCC-GTGCTGCGTGTGTACTGGCTAGGGTTAGGGGGGGTCGTCTTGGTCAGATCCTGTTGGA
>SNPs
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--------S-----------------------------------------------------------------------
-------------------------------------------S---------------------------S--------
--------------------------------------------------------------------------------
---------------S--------------------------------------------------S--------S----
---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------
--------------------------------------------S-----------------------------------
--------------------------------------------------------S----------------S---S--
-------------------S------------------------S-------------------------SS--------
-SS--SSSS-------------------S---S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-------------S---------------------
-----------------S--------------------------------------------------------------
--------------------------------SS-----------------------------S------------SSS-
------------------------------------------------S------SSS-----------------S----
------------------------------------S---------------------S--------S-SSS--SSSS-S
SSSSSSSSSSSS-SS-SSSS--------SS--S------------S---------------------S--S---------
------------------------------------------------------S---------S-S--------SSSSS
SSS---SS---S----------------S-----------SSS---------S-S---S---------S-----------
------------------------SS-----S--S--S---------S---------------SSSS---------S---
----S-S----S----S------S-S----S----S-----------------SSS---SSSS-------S---------
--S------S---S---S----S--SS-S-S-----------S-------------------------------SS----
----------------------------SSSS-------S---S----S--SSS--------------------------
---------------S-----S---------S----------S-SSSS---------SSSSS------------------
---S-SSSSS-S--S-SS-SSS-----S----S-----S-------------------------------S---------
---------S----------------------------------------------------S-S-S--S-SS------S
--SSSSSSS---------SSSSSSSS---------------------SS--S--S-------------------------
-----------S-----------------------------------S-----SS------------------------S
-S-------S-------------------S--S-----------------------------------------------
------------------------------------------S-------------S-SS-SSSS--S------------
-S--------------------------------------S-SSSSSSSSSSSSS---S-------------------SS
-SS--------------S---------------------S----------------------------------------
-----------S------------------S--SSSSSSSSSSSSSSSSSSSSSSSS-----------------------
---------------S----------------------------------------S----------S-----S------
------SS---S--------------------------------------------------S-----------------
-----------------------S--SSSSSSSSSSSSS-----------------------------------------
----------------S---SSS-SS-S----------------------S----------------------S--S-SS
SSS----S-------------------------------------------------------------------S----
S----------------------------------SSSSS------------S---------------------------
-------S-----------SSSSSS--------S-------------------------------S--------------
------------------S------------------------S---------------------------------
>forward_916
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----------------TAGTCTCCTCACTCCTCCCG--------------------------------------------
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>reverse_1852
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-----------AGAGGAGCACGTAGTACCGT-------------------------------------------------
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>forward_1830
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--------------------------------------------------TCTTCAGAACCACCTGCGAG----------
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>reverse_3157
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------------------------------------CAGTGGAGAGAAGGGAGGGA------------------------
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-----------------------------------------------------------------------------
