>input_sequence_47419
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-------------------------------------------------------TTATCCCGCGAGGTGGTTACTGCCG
AACGCCGCCGCA---ATGGGCTTTACCCTCCCAGCCGCCATGGCATCCACCAGCG------CCACCTTGCCTGGTTGGTC
GATGCTGGATCGCTTCGTGTTCTGGAGCGAGAACTTCGCCTTCCCCAAGGACGCCGCCTCAACCCTGGCCCCCGGCACCA
ACTCCATGGACCAAAAGTTCCGGATCTGCTTCAAACTCGTCGACCCGCCGGGGGTGTCCCGCCTTTATCTGCAGATGGAG
GACGGCCTGTGGCAGTCCCATAGCTTCGACATCGTCGCCGCCCACCGCGCCGCGCTTCTCCTCCAGATGAGCTACCCTAT
CCAGGTGCCAGGCTACGACGCCATCATCCCGATGATCGACCACTTCCTCTACCGCGCCGCCGGCGGTGGCTCTCCGCCGT
CTCTGGAGCGGCTCCCCCCTCTTGACGGGACCATCGCCCAGCTCCAGGACCGAATCAAGGCCCGGGCCAGTGACGACGCC
ACCACGAATCAGCTTTTGCGCAGGCTGCGGGGCCTGGACCTAGGCGTCCTGTGCCGCGGAGGGGACGAGGTCGCCGTCGC
AGAGCTCGAGATCACCGGGTCCATGGCGCCGCCCAAGCTCCACGTACTCTGCCCGTCCACCTCCAGCAGTTGGGAGGTCA
AGCATCCGCCCATCGTACCCTGCGACGCCGCCAAGGAATTTGATCTGGGGGAGTTCTTTAGGTGCTTTGATGCTCACGCG
GTCGTCTCCTTCAGGAGTTATCTGTGCTGGGTCGATTACTCCCTTGGCATCCTGTTCTGCGATGTGTTTGACGAGAGCCC
CAAGCTCCTAAACCTGGAACTCCCAGCTCAATTGCCCCAATTGCATCGCGAAGTCATGGGCCGAGCATGGGCCGAGGCGT
ACCACGCCGTGGGCGTCACAGAGGGCGAGGTCATGAAATTTGTCAAACTTGTCCGTGACAAGGACGAGCTTTCTGAAACC
ACTGGACCTGCCACCGATGCTTTCACCATCACCTCATGGTCACTCAAAATAACAGAAAGCAACGGCATGATGAAGTGGGA
GCAGGATGCATTTCTTAGATCCAGCGAGATCGGGTTTGATGGATTCACGCATCTTCCTCGTACCCCGTTGGAATTCCCTC
TCATCAGCATGTATGAGCCCAGTGTCGTTTACTTCATGATCGGGCATGACCAGGCGTCGTACATGTATAATAAGGTGTGG
ATTGTTGCCGTTGACATTAGCAATGGCAAGGTGAAGTCGTCGTCTGCATACATCAACGGTGTAGAACAGGTGGGGGACCT
CTGTGGTGAGGAAGCTTTGTACTTTGCCAAAGAAAAACCCCAGTGTTACACTAGCTTTCTT-CCTGCCGACTTCGCCAAG
CACCTCAATTTGTTTGGAACCAGGTAATTGCTTCTCATGTACTCACTCTATAAAGAAATATAAGAGCGTTTAGATCACTA
AAGTG-------------------CAGAGGGAGTAG---GTATGTATTTCGTTGTTTGTGCACAATATTCATTTAGATTG
TTTGTTTTCTCAGCTACTTATGTTTG----------CTGCCCCATTTGGTGTTTGTGTCAATCAAGGGTAGTCTTGATCT
TACTTCCAGTAAA-------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr1D_1_TraesCS1D01G169000
GCACAACAAATTATGCGCTGTTTAAATATGAAAAATTAAAAAGAACAAAGAAAATGCCACCTAAAAAATATCAGAGATGC
CCCTATGAACTACCAATCGCTATGTTTTTTTCCTCCTTATATTAATTCATAAGGAAAAACCTTATGTTTTAGTAACTATT
CATGTTCTTATAGTGGAGAGTAAACATCTACGTAGGAGGATCCAAAAATTTATGCGGACAAACTATGAGGAAAACAAAAA
AAAGGAAAATAAATATAAGGAAACATCACGCCACAACCTACAGCCCACATAGAAAAGGCCCAAGATGGGTGGACAATGAC
CACAACGGCACAACTGATGGGCCACCGTCTGCTACGGTAGAAACAGGGCGAGTAAACATAGACAATAACGCGCAGATTAA
TCAAATTGGATTGGCTAACCTCGGTCGACTGAGACTTCACTAAATCTCAGTCGACTGAGATTTAGCACAACCGTTTTTCT
ATTTTCTCTTCTACATTATTTATTTATTTTTCAAGAAATGTTCAAACTTTCAAAAATTCTTCATGTTTTTAAAAATTATT
CGTGTTTTTTTTCTTCAAAAAATTCTTGAATTTGAGAGAAGTTCACAATTTTAAAAATCTTTGGAATTTTCAAAATTATT
CATGATTATAATC-------TTTTTTTTAAGTCGTGGACATTTTGGAATTTCATTATTTTTTGAATTCATGAACACTTTT
CTAATTCACATA-TTTTTTGAATTTGGCAAGAATTTTTGTATTTCATGAACCTTTTTGAATTTACGGATTTTTAGTAC--
-GCCCACATTATTTTAGTTTTTTTATTCACATTTTTTTTCTAAAACCATAACCTTTTCTTGTAGTCGTGTTTTTTTTT--
-CAAATTAAAATTGAACTGGCCGAAAAAAACGAAATGAGAAAAACAAAAACAGACTTGCGGCATCTCGATGGGCCAGGCC
C-ATCTCGCGCGGTCTATATAAAAGCAGCGCCCCTCGTGGGTGCTTTCTGTCTTCTTATCCCGCGAGGTGGTTACTGCCG
AACGCCGCCGCA---ATGGGCTTTACCCTCCCAGCCGCCATGGCATCCACCAGCG------CCACCTTGCCTGGTTGGTC
GATGCTGGATCGCTTCGTGTTCTGGAGCGAGAACTTCGCCTTCCCCAAGGACGCCGCCTCAACCCTGGCCCCCGGCACCA
ACTCCATGGACCAAAAGTTCCGGATCTGCTTCAAACTCGTCGACCCGCCGGGGGTGTCCCGCCTTTATCTGCAGATGGAG
GACGGCCTGTGGCAGTCCCATAGCTTCGACATCGTCGCCGCCCACCGCGCCGCGCTTCTCCTCCAGATGAGCTACCCTAT
CCAGGTGCCAGGCTACGACGCCATCATCCCGATGATCGACCACTTCCTCTACCGCGCCGCCGGCGGTGGCTCTCCGCCGT
CTCTGGAGCGGCTCCCCCCTCTTGACGGGACCATCGCCCAGCTCCAGGACCGAATCAAGGCCCGGGCCAGTGACGACGCC
ACCACGAATCAGCTTTTGCGCAGGCTGCGGGGCCTGGACCTAGGCGTCCTGTGCCGCGGAGGGGACGAGGTCGCCGTCGC
AGAGCTCGAGATCACCGGGTCCATGGCGCCGCCCAAGCTCCACGTACTCTGCCCGTCCACCTCCAGCAGTTGGGAGGTCA
AGCATCCGCCCATCGTACCCTGCGACGCCGCCAAGGAATTTGATCTGGGGGAGTTCTTTAGGTGCTTTGATGCTCACGCG
GTCGTCTCCTTCAGGAGTTATCTGTGCTGGGTCGATTACTCCCTTGGCATCCTGTTCTGCGATGTGTTTGACGAGAGCCC
CAAGCTCCTAAACCTGGAACTCCCAGCTCAATTGCCCCAATTGCATCGCGAAGTCATGGGCCGAGCATGGGCCGAGGCGT
ACCACGCCGTGGGCGTCACAGAGGGCGAGGTCATGAAATTTGTCAAACTTGTCCGTGACAAGGACGAGCTTTCTGAAACC
ACTGGACCTGCCACCGATGCTTTCACCATCACCTCATGGTCACTCAAAATAACAGAAAGCAACGGCATGATGAAGTGGGA
GCAGGATGCATTTCTTAGATCCAGCGAGATCGGGTTTGATGGATTCACGCATCTTCCTCGTACCCCGTTGGAATTCCCTC
TCATCAGCATGTATGAGCCCAGTGTCGTTTACTTCATGATCGGGCATGACCAGGCGTCGTACATGTATAATAAGGTGTGG
ATTGTTGCCGTTGACATTAGCAATGGCAAGGTGAAGTCGTCGTCTGCATACATCAACGGTGTAGAACAGGTGGGGGACCT
CTGTGGTGAGGAAGCTTTGTACTTTGCCAAAGAAAAACCCCAGTGTTACACTAGCTTTCTT-CCTGCCGACTTCGCCAAG
CACCTCAATTTGTTTGGAACCAGGTAATTGCTTCTCATGTACTCACTCTATAAAGAAATATAAGAGCGTTTAGATCACTA
AAGTG-------------------CAGAGGGAGTAG---GTATGTATTTCGTTGTTTGTGCACAATATTCATTTAGATTG
TTTGTTTTCTCAGCTACTTATGTTTG----------CTGCCCCATTTGGTGTTTGTGTCAATCAAGGGTAGTCTTGATCT
TACTTCCAGTAAACAAAAATAACCTGGGATCTAGAGTTTGGAATTTGAATCAAAATTTTGAAG--AGATGTTAGTTGGCT
GTGACCAAAAGGAGTACTGTCTTCCTCTCTAAGTTGTTCTCATCGTATTACCTGT-CACATCTGTATGATGGCCATCCTT
CAAGGCTTCAACCAAATCTCTCAACCTGCAATTTCCAGCAAGTTAAGCTGCACCTGCTACCACCGAGGCTTTGGGTACTT
ATTTTTGAGACGCAACCATTTATATGGCACTGCGCCACCTTGTTACTGTAGAACGTGTAATTTGTCCGTCTAAGAGCATC
TCCGGCTGTTGCCTCCCAGGAGGCATAAAAATCGCTGCCTGAAGGCGAGCCGGCGGTACAATCGGCGCTGGGGGCGGTTG
GGCGTCTAGCCGTCGCCCCCAGGCGTCGATATTGGCCCAGTTTTCGGCCCACTTTCGGCGAATAAAGGCCCCATATGGGC
GAGAATCGGCCCATATTCGGTGTGGTTCGTCGTGGTTCGGCATTGAATTCTTAACATGAATATTTTTTTATCACATAGTT
CATCGCAGAAAATCAAATAGTTCAACAAAATAGTGCAACAACAAATAGTTCAATACACATTATATAGTTCAACAAATAAA
AACTCATATTCACCACACGTCGCGCCCGGCGTCGCCCTTGAGCCTTCATAGGTGCTCCACCAGATCCTGCTGCAGTTGAT
GCTGCACCTGTGGGTCTCGGTGTTGGGAATCGTAGCATAATTTTAAAATTTTCCTACGCTCACCAAGATGCATCTATGGA
GTATACTAGCAACGAGGGGAAAGGAGTGCATCTACATACCCTTGTAGATCGCGAGCGGAAGCGTTCCAATGAACGTAGAT
GACGGAGTCGTACTCGCCGTGATCCAAATCACCGATGACCGAGTGCCGAACGGACGGCACCTCCGCGTTCAACACACGTA
CAGTGCAGCGACGTCTCCTCCTTCTTGATCCAGCAAGGGGGAAGAAGAGGTTGATG
>chr1B_474
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TTTTTCT
ATTTTCTCTTCTACCTTATTTATTTATTTTTCAAGAAATGTTCAAACTTTCAAAAATTGTTCATGTTTTTCAAAATTATG
TG---TTTTTTTCTTCAAAAAATGCTTGAATTTGAGAGAAGTTCACAATTTTAAAAATCTTTGGAATTATAAAAATTGTT
CATGATTACAAAAAATCGTTTTTTTTTCAAGTCGTGGACATTTTGGAATTTCATTATTTTTTGAACTCATGAACACTTTT
CTAATTCACAAATTTTTTTGAATTTGGCAAGAATTTTTGTATTTCATGAACCTTTTTGAATTTACGGATTTTTTTGAGCA
TGCACACATTATTTTAAATTTTTTATTCACATTTTTTTTCTAAAACCATAACCTTTTCTTGTAGTCGTGATTTTTTTTCT
CCAAATTAAAATTGAACTGGCCGAAAAAAGCGAAATGAGAAAAACAAAAACAGACTTGCGGTCTCTCGATGGGCCAGGCC
CAATCTCGCGCGGTCTA--TAAAAGCAGCGCCCCTCGTGGGTGCTTTCTGTCTTCTTACCCCGCGAGGTGGTTACCGCCG
AACGCCGCCGCC---ATGGGCTTTACCTTCCCAGCCGCCATGGCATCCACCAGCG------CCACCTTGCCTGGTTGGTC
GATGCTCGACCGCTTCGTGTTCTGGAGCGAGAACTTCGCCTTCCCCAAGGACGCCGCCTCAACCCTGGCCTCCGGCACCA
ACTCCATGGACCAAAAGTTCCGGATCTGCTTCAAACTCGTCGACCCGCCGGAGGTGTCCCGCCTTTATCTGCAAATGGAG
-AAGGCCTGTGGCAGTCCCACAGCTTCGAAATCGTCGCCGCCCACCGCGCCGCGGTCCTCCTCCAGATGAGCTACCCTAT
CCAGGTGCCAGGCCACGACGCCATCATCCCGATGATCGACCACTTCCTCTACCGCACCGCCGGCGGTGGCTCCCCGCCGT
CTCTGGAGCGGCTCCCCCCTCTTGACGGGACCATCGCCCAGCTCCAGGACCGAATCAAGGCCCGGGCCAGTGACGACGCC
ACCACGAATCAGCTTTTGCGCAGGGTGCGGGGCCTGGACCTAGGCGTCCTGTGCCGCGGAGGGGACGAGGTCGCCGTCGC
AGAGCTCGAGATCACCGGGTCCATGGCGCCGCCCAAGCTCCACGTCCTGTGCCCGTCCACCTCTAGCAGCTGGGAGGTCA
AGCATCCGCCCATCATTCCCTGCGACGCCGCCAGGGAATTTGATCTGGGGGAGTTCTTGAGGTGCTTTGATGCTCACGCG
GTCGTCCCCTTCAGGAGCTACCTGTGCTGGGTCGATTACTCCCTTGGTATCTTGTTCTGCGATGTGTTCGATGAGAGCCC
CAAGCTCCTACACCTGGAACTCCCAGCTAAATTGCCCCAATTGCATCGCGAAGTCATGGGCCGAGCATGGGCAGAGGCAT
ACCACGCCGTCGGCGTCACAGAGGGCGAGGTCATGAAATTTGTCAAACTTGTCCGTGACAAGGACGAGTTCTCTGAAACC
ATGGCGCCTGCCACCGATGCTTTCACCATCACCTCCTGGGCACTGAGAATAACAGAAAGCGACGGCATGATGAAGTGGGA
GCAGGATGCATTTCTCAGATCCAGCGAGATCGGGTTTGATGGATTCACACATCTTCCTCGTACCCCATTGGAATTACCTC
TCTTCAGCATGTATGAGCCCAGTGTCGTTTACTTCATGATCGGGCAGGACCAGGCGTCGTACATGTATAATAAGGTATGG
ATTGTTGCCGTTGACATTAGCAACGGCAAGGTGAAGTCTTCATCTGCATACATCAATGGTGTAGGACAGGTGGGGGACCT
CTGTGGTGAGGAAGCGCTGTACTTTGCCAGAGAAAAACCCCAGTGTTACACTAGCTTTCTTACCTGCCGACTTCGCCAAG
CACCTTAATGTGCTTGGAACCAGGTAATTGCTTCTCATGTACTAACTCTGTAAAGAAATGTAAGAGCGTTTAGATAGTGA
TCTAAACCCTCTTATATTTCTTTACAGAGGGAGTAC---GTATGTATTTCGTGGTTTGTTTACAATATTCATTTGAACTG
---------------------------------------CCCCCTTTGGTTTTGTGTC----CAAGGGTAGTCTTGATCT
TACTTCCAGTAAACAAAAATAACCTGGGATCTAGAGTTTGGAATTTGAATCAAAATTTTGAAGAGAGTTGTTAGTTGGCT
GTGACCA-GAGGAGTACTGTCTTCCTCTC--AGTTTTTCTCATCGTATTACCTGTGCACATCTGTATGATGGCCATCCTT
CAAGGCTTCAACCAAATCTCTCAACCTGTAATTTCCAGCAAGTTAAGCTGCACCTGCTACCACCGAGGCTTTGGGTACTT
CTTTTTGAGATGCAACCATTTATATGGCACTGCGCGGCCTTG--------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr1A_1005
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-----------------------------------------------------------CCCGGGAGGTTGTTACCGCCG
AACGCCGCCGCCGCAATGGGCTTTTCCTTCGCCGCCGCCGCTGCCCGACCTGCCATGGCATCCACCCTCCCTGGTTGGTC
GATGCTTGACTGCTTCGTGTTCTGGAGCGAGAACTTCGCCTTCCCCAAGGACGCCGCCTCAACCCTGGCCTCCGGCACCA
ACTCCATGGACCAAAAGTTCCGGATCTGCTTCAAACTCGTCGACCCGCCGGAGGTGTCCCGCCTTTATCTGCAAATGGAG
GAAGGCCTGTGGCAGTCCCATAGCTTCGAAATCGTCGCGGCCCACCGCGCCGCGGTGCTCCTCCAGATGAGCTACCCCAT
CCAGGTGCCAGGCTACGACACCATCATCCCGATGGTCGACCACTTCCTCTACCGCGCCGCCAGC--TGGCTCCCCGCCGT
CTCTGGAGCGGCTCCCCGCTCTTGACGGGACCATCGCCGAGATCCAGGACAGAATCAAGGCCAGGGCCAGTGACGACGCC
ACCACGAATCAGCTTTTGCGCAGGCTGCATTGCCTGGACCTAGGCGTCCTGTGCCGCGGAGGGGGCGAGGTCGCCGTCGC
AGAGCTCGAGATCACCGGGTCCATGGCGCCGCCCAAGCTCCACGTCCTGTGCCCGTCCACCTCTAGCGGTTGGGAGGTCA
AGCATCCGCCCATCATTCCCTGCGACGATGCCAGGGAATTTGATCTGGAGGAGTTCTTGCGGTGCTTTGATGCTCACGCC
GTCGTCCCCTTCAGGAGCTACCTGTGCTGGGTGGATTACTCCCTTGGCATCCTGTTCTGCGATGTGTTCGACGAGAGCCC
CAAGCTCCTATACCTGGAACTCCCAGCTCAATTGCCCCGATTGCATCGCGAAGTCATGGGCCGAGCATGGGCGGATGCGT
ACCACGCCGTCGGCGTCACAGAGGGCGAGGTCATGAAATTTGTCAAACTTGTCCATGACAAGGACAGGTTCTCTGAAACC
ATCGGACCTGCCACTGATGCTTTCACCATCACCTCCTGGGCACTTAGAATAACAGAAAGCGACGGCATGATGAAGTGGGA
GCAGGATGCATTTCTTAGATCCAGCGAGATCGGGTTTGATGGATTCACGCATCTTCCTCGT-------------------
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>chr1B_1057
--------------------------------------------------------------------------------
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----------------------------------CCGCCATGGCTTCCACCAGCA------CCACCTTACCTGATTGGTT
GATGCTCGACCGCTTCGTGTTCTGGAGCGAGAACTTCACCTTCCCCAAGGACGCCGATTCAACCCTGGCCACCGGCACCA
ACTCCATGGATAAAAAGTTCCAGATCTGCTTCAAACTCGTTGAGCCGCCGGAGGTGTCCCGCCTTTATCTGCAGATGGAT
GAAGGCTTGTCGCAGTCCCATAGCTTCGACATCGTCGCCGCCCACCGCGCCGCGGTGCTCCTCTAGATGAGTTATCCTAT
CCTTGTGCCAGGCTACGAGAACACCATCCCGATGATCGACTACTTCCTCTACTATACCGCCGGTGGTGGCTCTCCGCCGT
CTCTACAGCGGCTACCCCCTCTTGACGGGACCATTGCCCAGGTCCAGGACCAAATCAAGGCCAGTGCT------GACGTC
ATGACGAATCAGTTTTTGCGCAGGCTGAAGTGCCTTGACCTAGGCGTCCTGTGCCGCGGAGAGGATGAGGTCGCCGTCGC
ACAGCTCGAGATCACCGAGTCCGGGGCGCCACCTAAACTCCAGGTCCTGTGCCCGTCTATCTCTCGCAGTTGGGAGGTCA
AGCATCCGCCCATCGTACCCTGCGACGATGTGAAGGAATTTGATTTGGAGGAGGTCTTTAAGAACTTTGATGCTCACACA
GTCATCCCCTTCAAGAGTTACCTGTGTTGGGTTGATTACTCCTTTGGTATCTTGTTCTGCGATGTGTTCAATGAGAGCCC
CAAGCTCCTATACCTGGAACTCCCGGCTAAATTGCCCATATTATGGGCCGGACACAAGGGCCGAGCATGGGTAGAGGCGT
ACCACACCGTTGGTGTCACAGAGGGTGAGGTTATGAAATTTGTCAAAGTTGTCGATGGCAATGATGAGTTTTTTGAAACC
ACTGAACCTGCCAGTGATGATTTCACCATCACCTCCTGGGCACT---AATAACAGAAAGCAACGGCGTGATGAAGTGGAA
GCAGGATGCATCTATTAGATCCAGTGAGATAGGGTTTGGTGGACTCACACATCTTCCTCGTACCCCATTAGAGTACCCTG
TTATCAGCATGTATGAGCCCAGTGTCATTTACTTCATGATCGGGCATGACCAAGCATCGTACATGTATAATAAGGTATGG
ATTGTTGCCATTGACATTAGCAATGGCAAGGTGAAGTCGTCATCTGCATACATCAATGGTACAGAACAGGTGGGGGACCT
CTGTGCTGATGAAGCTTTGTACTTTGCCAGAGAAAAACCCCAGGTTTACTCTACCTTTCTT-CCTGCCGAGTTCTCCAAG
CACCTCAATTTGCTTGGAACAAGGTAATTGCTTCTCATGA----------------------------------------
-----------------------------------------ATTTACTTTGTGGTTTGTGCACAATATTCATATGGACTG
TTTGTTTTCTCAGCCACTTATGTGTCTAGACTCTTCCTGCCCCATTTGGTGTTTGTGTCAATCAAGGGCAGTCTTGATCT
TACTTCCAGGAAACAAAAATAACCTGGGATCTAGAGTTTGGAATTTGAATCAAAATTTTGAAGACAGATGTTAGTTGGCT
GTGACCAATAGGAGTACTGTCTTACTCTC--AGTTTTTCTCTTCATATTAGCTGT-CACATCTGTATGATGGCCATCCTT
CAAGGCTTCAACCAAATCTTTCTACCTGCAATTTCCAGCAAGTCAAGCTGCACCTTCTACCACCGAGTCTTTGGGTACTT
CTTTTTGAGAC---------------------------------------------------------------------
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>chr1B_1057
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----------------------------------CCGCCATGGCTTCCACCAGCA------CCACCTTACCTGATTGGTT
GATGCTCGACCGCTTCGTGTTCTGGAGCGAGAACTTCACCTTCCCCAAGGACGCCGATTCAACCCTGGCCACCGGCACCA
ACTCCATGGATAAAAAGTTCCAGATCTGCTTCAAACTCGTTGAGCCGCCGGAGGTGTCCCGCCTTTTTCTGCAGATGGAT
GAAGGCTTGTCGCAGTCCCATAGCTTCGACATCATCGCCGCCCACCGCGCCGCGGTGCTCCTCCAGATGAGTTATCCTAT
CCTTGTGCCAGGCTACGAGAACATCATCCCGATGATCGACTACTTCCTCTACTATACCGCCGGTGGTGGCTCTCCGCCGT
CTCTACAGCGGCTACCCCCTCTTGACGGGACCATTGCCCAGGTCCAGGACCAAATCAAGGCCAGTGCT------GACGTC
ATGACGAATCAGTTTTTGCGCAGGCTGAAGTGCCTTGACCTAGGCGTCCTGTGCCGCGGAGAGGATGAGGTCGCCGTCGC
ACAGCTCGAGATCACCGAGTCCGGGGCGCCACCTAAACTCCAGGTCCTGTGCCCGTCTATCTCTCGCAGTTGGGAGGTCA
AGCATCCGCCCATCGTACCCTGCGACGATGTGAAGGAATTTGATTTGGAGGAGGTCTTTAAGAACTTTGATGCTCACACA
GTCATCCCCTTCAAGAGTTACCTGTGTTGGGTTGATTACTCCTTTGGTATCTTGTTCTGCGATGTGTTCAATGAGAGCCC
CAAGCTCCTATACCTGGAACTCCCGGCTAAATTGCCCATATTATGGGCCGGACACAAGGGCCGAGCATGGGTAGAGGCGT
ACCACACCGTTGGTGTCACAGCGGGTGAGGTTATGAAATTTGTCAAAGTTGTCGATGGCAATGATGAGTTTTTTGAAACC
ACTGAACCTGCCAGTGATGATTTCACCATCACCTCCTGGGCACT---AATAACAGAAAGCAACGGCGTGATGAAGTGGAA
GCAGGATGCATCTATTAGATCCAGTGAGATAGGGTTTGGTGGACTCACACATCTTCCTCGTACCCCATTAGAGTACCCTG
TTATCAGCATGTATGAGCCCAGTATCATTTACTTCATGATCGGGCATGACCAAGCATCGTACATGTATAATAAGGTATGG
ATTGTTGCCATTGACATTAGCAATGGCAAGGTGAAGTCGTCATCTGCATACATCAATGGTACAGAACAGGTGGGGGACCT
CTGTGCTGATGAAGCTTTGTACTTTGCCAAAGAAAAACCCCAGGTTTACTCTACCTTTCTT-CCTGCCGAGTTCTCCAAG
CACCTCAATTTGCTTGGAACAAGGTAATTGCTTCTCATGA----------------------------------------
-----------------------------------------ATTTACTTTGTGGTTTGTGCACAATATTCATATGGACTG
TTTGTTTTCTCAGCCACTTATGTGTCTAGACTCTTCCTGCCCCATTTGGTGTTTGTGTCAATCAAGGGCAGTCTTGATCT
TACTTCCAGGAAACAAAAATAACCTGGGATCTAGAGTTTGGAATTTGAATCAAAATTTTGAAGAGAGATGTTAGTTGGCT
GTGACCAATAGGAGTACTGTCTTACTCTC--AGTTTTTCTCTTCATATTAGCTGT-CACATCTGTATGATGGCCATCCTT
CAAGGCTTCAACCAAATCTTTCTACCTGCAATTTCCAGCAAGTCAAGTTGCACCTTCTACCACCGAGTCTTTGGGTACTT
CTTTTTGAGAC---------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>chr1B_1057
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------CCGCCATGGCTTCCACCAGCA------CCACCTTACCTGATTGGTT
GATGTTCGACCGCTTCGTGTTCTGGAGCGAGAACTTCACCTTCCCCAAGGACGCCGATTCAACCCTGGCCACCGGCACCA
ACTCCATGGATAAAAAGTTCCAGATCTGCTTCAAACTCGTTGAGCCGCCGGAGGTGTCCCGCCTTTATCTGCAGATGGAT
GAAGGCTTGTCGCAGTCCCATAGCTTCGACATCGTCGCCGCCCACCGCGCCGCGGTGCTCCTCCAGATGAGTTATCCTAT
CCTTGTGCCAGGCTACGAGAACATCATCCCGATGATCGACTACTTCCTCTACTATACCGCCGGTGGTGGCTCTCCGCCGT
CTCTACAGCGGCTACCCCCTCTTGACGGGACCATTGCCCAGGTCCAGGACCAAATCAAGGCCAGTGCT------GACGTC
ATGACGAATCAGTTTTTGCGCAGGCTGAAGTGCCTTGACCTAGGCGTCCTGTGCCGCGGAGAGGATGAGGTCGCCGTCGC
ACAGCTCGAGATCACCGAGTCCGGGGCGCCACCTAAACTCCAGGTCCTGTGCCCGTCTATCTCTCGCAGTTGGGAGGTCA
AGCATCCGCCCATCGTACCCTGCGACGATGTGAAGGAATTTGATTTGGAGGAGGTCTTTAAGAACTTTGAT---------
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--------------------------------------------------------
>chr1A_2112
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------CCTCGTACCCCATTGGAATTGCCTC
TCATCAGCATGTACGAGCCCAGTGTCGTTTACTTCATGGTCGGGCAGGACCAGGCGTCGTACATGTATAACAAGGTATGA
ATTGTTGCCGTTGACATTAGCAAGGGCAAGGTGAAGTCGTCGTCTGCAGACATCAATGGTGTAG----GGTGGGGGACCT
CTGTGGTGAGGAAGCTTTGTACTTTGCCAGAGAAAAACCCCAGATTTACACTAGCTTTCTT-CCTGCCGAGTTTGCCGAG
CACCTCAATTTGCTTGGAACCAGGTAATTGCTTCTCATGTACTCACTCTGTAAAGAGATATAAGAGCATTTAGATAGTGA
CG------CTCTTATATTTTTTTACAGAGAGAGTATGTAGTATGTATTTCATGGTTTGTGCACAATATTCATTTAGA---
------------------------------------CTGCCCCCTTTGGTGTTTGTGTCAATCAAGAGTAGGCTTGATCT
TACTTCCAGTAAACAAAAATAACCTGGGATCTAGAGTTTGGAATTTGAATGCAAATTTTGAAGAGTGATGTTAGTTGGCT
GTGACTAGGAGGAGTATTGTCTTCCTCTC---------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------
--------------S-------------------------------------------S-----------S--------S
S-SSS------------------S--------------------------------------------S-S------S--
--------S--SS--------------S-------------------------------------S--------------
----------S--------------------------------------------------------------SSS-S--
---S------------SS---------------------------------------------------S----------
-----------------------------S-------------------------------SS-----------------
-----------------SS---------------------------------------S----------------S----
-----------S---------------S----------------------------------------------------
------S--S------------------------------------------------------------S---------
---------------------------------------------------S----------------------------
--S---------------------------------------------------S-S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S--S--------------S----------------
--------------------------------------------------------------------------------
------S-------------S-----------------------------------------------S-----------
----------S-------------------------------------------------------------S-------
----------S---------------------------------------------------------S-----------
-----------------------------------S---S----S-S---------------------------------
------------------------------------------------------------------S-------------
----------------------------------------------------------------------------S---
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
------------S------------------------------------S-------------------------SSSS-
SSSSS------------------------------S----------------S------------------------S--
--------------S--------S-S------------------------------------------------------
--------------------------------------------------------------------------------
--------S--------------------SS----S--------------------------------------------
--------------------------------------------------------------------------------
S----------------------------------SS-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_301
--------------------------------------------------------------------------------
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-----------------------------------------AGCCCACATAGAAAAGGCCC-------------------
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>reverse_1127
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GGATCGCTTCGTGTTCTGGA------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>forward_339
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
CACAACGGCACAACTGATG-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_1252
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------GGGTGTCCCGCCTTTATCTG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>forward_433
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GCTAACCTCGGTCGACTGAG-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_2237
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GTGG
ATTGTTGCCGTTGACA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>forward_1130
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CTGGTTGGTC
GATGCTGGAT----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
>reverse_3078
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------CAGTTTTCGGCCCACTTTCG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------
