>input_sequence_47396
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------------------------------------------ATGGCATTGGAGGCCGCGGTGCTCTCCCGCGCTGCTGC
TGGTCTCTTCGGTCGCTGCGCCATGGCGGGGGCGGGGGCGGGGGGAGCTTGGAATGGTCTGTTCGGCGGCGGCGAAGGGC
TGGCGGGCTTGGACGGCGGGGACTGGGACGCCGCCGTCGCGGCGGCGTGCTCGTCGATGCTGCTGCCTCAAGCTGCGTTC
CAGGAGCTGGACATCTCCGCCGTCGCCGCCACTGCCGCTCCGCAGGAGGAGTCCGGAGGTCGCGGCGAGATGAGCGCGGC
CGGCGTGGGTCAGGATGATGCTGCGCCCGTGGCGGCGGCGGCGACGGGGCGGAGGAAGCGGCGGCGGACGAGGATGGCCA
AGAACTCGGAGGAGGTGGAGAGCCAGCGGATGACCCACATTGCCGTCGAGCGCAACCGCCGCAAGCAGATGAACGAGTAC
CTCGCCGCGCTCCGCTCTCTCATGCCGCCCTCCTACGCGCAAAGGGTACG--TTAACAGCCGCCATTGACCTCCTCGACC
CCTTTCCTCGGTTGTTTATGGAGTAGTTGACACTGAAGTGTGTGCTATTGCTGCGTACTACGTAGGGTGATCAGGCGTCC
ATCGTCGGAGGTGCGATCAACTTCGTCAAGGAGCTGGAGCAGTTGCTCCAGACGCTGGAGACGCACAGGCAGGCCCGGGA
ACGC---GCGGCCGCCGTCGACGGCGGGGAAGCGCCGCCACCGCCGTTCGCCAACTTCTTCACCTTCCCGCAGTACTCGA
TGAGCGCCACCCCGGCACCGGCACCAGCACCTCCGGCGAACAACGAC---GAGGGCGCCGACGGCTGCGCCGAGGCGGAG
GCGTCGGGATCAAAGCCGTCGGCGGTGGCGGACGTGGAGGTGACGATGGTGGAGAGCCACGCGAACCTGCGGATGCTGTC
CCGGCGGCGGCCGAGGCAGCTGCTGCGGCTGCTGGTGGGGCTGCAGGGCCACCGGCTCACGGTGCTGCACCTCAACATGA
GCAGCGCCGGCCACATGGTGCTCTACTCGCTCAGCCTCAAGGTACGTTACGTAGC---ACGCCTAGC-----------TA
CAAGTAAACAACTCCGGCTTTTGTGATATGCATGCATATGGCCCTCAGTCCAAGGAGGTTTACGGCAGCAGTGCCTCTAT
ATCTGGTTAGCAATATCATACCGCTTCAGCCTGAAACAAGCTGGTGCCTAGGTTTCCGTGCTTTTTGTATTTTGCGTTGT
CCTCGACAGCAAACGCCTCCAAATTCTCCCAGCTGTTTACTCTAATGGACCTCAGCAAACCTAGCTAAAAC-GTCCGGCG
TGTTTCCAGTTGGAATCGCTGTCTTAGTAGTAACTTAAATTACTGATGAGATCGTACGATGTGAGTCGGGGCTATAACCC
TAGGCCTAGTAACAATAG-----CCTTTGTGATTCCTTCCTAAAAAAAAATACAAAATCACTGAAGTGCATCATTCAAGC
TAATTTAGCCCTAGGCGTAATCTGAT----------GCTGGAAATATTTGCAGGTGGAGGACGATTGCCAACTTACCTCC
GTGGACGAGATCGCCACCGCGGCCCATCAGATCGTCGAGAAGATCCAGGAAGAGCAAGAGCTTACTGCGGCGGCTTAG--
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-------------------------------------------------------------------
>chr5A_1_TraesCS5A01G248200
AAGAAACTTATAAACATGTACTGAATGTCAAGTAACTCCTGGGTTTTGTGATTAGAACATCAGCATTAGGGGAGAGGGGC
GGACACTACCCATTTTTTTGAATAAACAACGCTTTTAATTGCTTATAAAGTACTAGTA---AGGAAATATAAACAGTACA
CAACCGG--CCGGCATCTGCACGATTGGGATACACAAAACCAATATCAACGCACATACATCAAGGATCACGCTGGTAAAG
GGCAAAGATATACAAGA---------TGGCTAAACGGATTGAATGAAAAACAAAA-------------------------
-------AGAAAGAGAGAAAAGGTAGAGCCTGTTGT--------------------------------------------
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------TTTTTTTAGACAAAAA-CCGCCGGCATTGCCTCGCGGTGGCCGGCGATGGCGTCGATCCTCGTTTTCCTCGGCA
CCTCGCTGGAATCGGCAGGAG-GAAGGGTTTGGGGAATGTTGAGGTCATCACCTCAGCACAAGCCAGACACACGTTTATA
CGGGTGGTGCCAGGGAAACCATGCCAAAGCCGAAGTTACATTCGTTGCCCCGATCATGGCACGTAGAACGAGGTTTCGGC
TCCCCCC-------------------------------------------------------------------------
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----------------------------------------------TTTTCTCTTCACGAGCCGAGATCAACAAATTCCA
ACACTGGAAAGTCGAGACTTTCTCCGTATGCT---CTTTCCCACGAGGCCATGATGAGCTTTCCGGCGACGAGGCAGTAG
TACGACCCACTCCGACTCCGACCAAATCATGGCCTAATCACACGCAAATCCGCAACCTTCCAAGCCCTCCCATCAATCAA
AAATCATCCTATATAGCA-----------CCCTCGCCACCGGCTCACCGCAACACGCCTCCCC-----CAGTCCCACTCC
GTTTCCCGAGCACACACGCAGCATCATTCACTCACTCACAGGAGCGCTG------GCTGGCTAGCTAGCTCCCTTCGCTT
CACGTGTCCGTCTCCATCCCCGGCCACCAACCGTCGCCAACTTGCCATGGAGAAGACCTAGCCAGCTCGCGCCCTTTGGT
CATTGGGAGTTGGGGGAGAGATCCACCGGAGGTAGACAAGGCATGGCATTGGAGGCCGCGGTGCTCTCCCGCGCTGCTGC
TGGTCTCTTCGGTCGCTGCGCCATGGCGGGGGCGGGGGCGGGGGGAGCTTGGAATGGTCTGTTCGGCGGCGGCGAAGGGC
TGGCGGGCTTGGACGGCGGGGACTGGGACGCCGCCGTCGCGGCGGCGTGCTCGTCGATGCTGCTGCCTCAAGCTGCGTTC
CAGGAGCTGGACATCTCCGCCGTCGCCGCCACTGCCGCTCCGCAGGAGGAGTCCGGAGGTCGCGGCGAGATGAGCGCGGC
CGGCGTGGGTCAGGATGATGCTGCGCCCGTGGCGGCGGCGGCGACGGGGCGGAGGAAGCGGCGGCGGACGAGGATGGCCA
AGAACTCGGAGGAGGTGGAGAGCCAGCGGATGACCCACATTGCCGTCGAGCGCAACCGCCGCAAGCAGATGAACGAGTAC
CTCGCCGCGCTCCGCTCTCTCATGCCGCCCTCCTACGCGCAAAGGGTACG--TTAACAGCCGCCATTGACCTCCTCGACC
CCTTTCCTCGGTTGTTTATGGAGTAGTTGACACTGAAGTGTGTGCTATTGCTGCGTACTACGTAGGGTGATCAGGCGTCC
ATCGTCGGAGGTGCGATCAACTTCGTCAAGGAGCTGGAGCAGTTGCTCCAGACGCTGGAGACGCACAGGCAGGCCCGGGA
ACGC---GCGGCCGCCGTCGACGGCGGGGAAGCGCCGCCACCGCCGTTCGCCAACTTCTTCACCTTCCCGCAGTACTCGA
TGAGCGCCACCCCGGCACCGGCACCAGCACCTCCGGCGAACAACGAC---GAGGGCGCCGACGGCTGCGCCGAGGCGGAG
GCGTCGGGATCAAAGCCGTCGGCGGTGGCGGACGTGGAGGTGACGATGGTGGAGAGCCACGCGAACCTGCGGATGCTGTC
CCGGCGGCGGCCGAGGCAGCTGCTGCGGCTGCTGGTGGGGCTGCAGGGCCACCGGCTCACGGTGCTGCACCTCAACATGA
GCAGCGCCGGCCACATGGTGCTCTACTCGCTCAGCCTCAAGGTACGTTACGTAGC---ACGCCTAGC-----------TA
CAAGTAAACAACTCCGGCTTTTGTGATATGCATGCATATGGCCCTCAGTCCAAGGAGGTTTACGGCAGCAGTGCCTCTAT
ATCTGGTTAGCAATATCATACCGCTTCAGCCTGAAACAAGCTGGTGCCTAGGTTTCCGTGCTTTTTGTATTTTGCGTTGT
CCTCGACAGCAAACGCCTCCAAATTCTCCCAGCTGTTTACTCTAATGGACCTCAGCAAACCTAGCTAAAAC-GTCCGGCG
TGTTTCCAGTTGGAATCGCTGTCTTAGTAGTAACTTAAATTACTGATGAGATCGTACGATGTGAGTCGGGGCTATAACCC
TAGGCCTAGTAACAATAG-----CCTTTGTGATTCCTTCCTAAAAAAAAATACAAAATCACTGAAGTGCATCATTCAAGC
TAATTTAGCCCTAGGCGTAATCTGAT----------GCTGGAAATATTTGCAGGTGGAGGACGATTGCCAACTTACCTCC
GTGGACGAGATCGCCACCGCGGCCCATCAGATCGTCGAGAAGATCCAGGAAGAGCAAGAGCTTACTGCGGCGGCTTAGGG
CA-GCATCTCACCTCAC---------ATTATGCAATGCGCAACATTAGTTTATTCTAGCAAGTTAGGCGACTCGTGTGCA
AACCAATAAAGTCCATCTCTGCAATGCAAT--------------------------------------------------
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---------------------------------------------------------------------------GCTTA
GTGCTGAATCCATGGATGAAAAATAATGAATTTGTTCAT--AATGTGCATCGGTAG-AGATGTTCCATGTAGAGT----A
GCTAGGCATGTGTTGCTTCTTCTGTTCAAAATGGGGGGC------ATGCAATATTGCAATGCAATGCAATGCTTCCAAAC
CGCTTGAAAGTTGAAGGCAGAGAACAATTCCATGCATGGCA------------GACATGACATATGGCATTCCCTGTGGC
CTACCGTGCTCCATAGGATCGGGCACTGTTGTCCGCT--GCTGTTCCTCAACCTCCTCGGTGCATCCTGTTCCCCCCGTG
AAGCGCCATTCCCTGCCAAAACACCAACAGACACCATCTCCCTTTTAGTTCCAA-ACGAGTAGCACGATTGATTACATCC
TTAATCGGTTATACTCCTGGAGTATT-------------TTTCATGTCTTCAGCGTGCCATAGTAATGACAAGTCCGTTT
CTGTAAAGAAGGCAGAGCCTTTTAGAGAAAGCAGCGTAGCACAGGGACACGAACACAGGCCAGGCAGGCATGCAGTACTG
CAAAGCCAATCGATG---GATGCCAAGACAAGCAGAAGAGAGGAGCTCCAAAACGCAGGACGCTTTACCTGTGCCGTGTC
GTCCCATTGACCCAGGGAAAAAGATTCTAGAACAGGGCGCTTTACCGGAATAGCCTTTTACCATTTCCATGTAAGCATGA
TTGACCGAATAGTGGAGCG----------GGGGCTGCAGAGGCCGCCCCGTTTCTGCGAACAGCGATGCTCCGCACCCGG
CCGATTCGACCGACGGGACAAAGCACATGCGCAGCTTTGCTCCCATGCAGCGTGTCGCGTTCCGGCCCCGAGATGTTCTG
CTCCAATCGATGTAAACTCCGTCCAGGTAAAAGGGTGGCGTCTCCGTCTCGCCTGGGAGTAAAAAAA
>chr5B_1
AAGAAACTTATAAACATTTACTGAATGTCAAGTATCTCCT-GGTTTTGTGATTAGAACATCAGCATTAGGGGAGAAGGGC
AGACACTAACCATGTT-TTGAATAAACAGCCCTTTTAATGGCTTATAAAGTACTAGTACCAAGGAAATATAAACACAATA
AGTACACAACCGGCATCTACACGATTGGGATACACAAAACCAATATCAACACACATACATCAAGGATCACGTTGGTAAAG
AGCAAAGATATACAAGACGAAAGCTATGGCTAAACGGATTA----AAAAACAAAA-------------------------
-------AGAAAGAGAGAAAAGGTACAACAACAATCCACGCCAAGCAGCTATTGAGCCAACGAAAAAGATGGAATCACAT
AGTCTGAACATGGACACAAACAAGCAAACTGGAAACCACGAACACACTGAGCAAAGCCACCGAGGGTTGTCCGAAACATC
CGTCGATGCACAAGTGACGCTAGTCACGAATCAATTGGTGAGAAGAGACGGTACCGCCAAAACCCCAGGTCATCCGCAGC
CCGCCAACGAAGGAGGCCGA---------------GCCCCACCGCCACCGTCATTGGCACCTGCACGAGCTTCGTTGATG
ACGGCTTCTTGCGGCGATGACATGAAAGGAAGGGGACATGTGTGTTGATGGTGGCAGGCTAGGGCTCCTCCGGGTCGCCG
GATGTGGGTACGCCGGGGGTTAGTTGGGGCGTCCGACACAAGCCTCTTGGGAAATGAGAGGCCATGGGTCGGACGCCGCC
ATAAGCGGTAGAGCCTGTTAGGGTGTGATCCCTCTCGATGGGCATGGCCCTCCTGCAGTGAAAGAGTTCCATGGAGGCCG
CCGGCATTTTTCTAGACAAAAGCCCGCCGGCATTGCCTCGCATTGGCCGGCGATGGCGTCGAT------------CGGCA
CCTCGCTAGAATTGGCAGCAG-GAA-GGGTTTGGGAATGTTGAGGTCATCACCTCAGCACAAACCAAACACACGTTTATA
CGGGTGGTGCCAGGGAAACCAGGCCAAAACCAAAGTTACATCTGGTGCCCCGATCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTTTTCTCTCTATACGAGCTGAGATCAACAAATTCCA
ACACAGGAAAGTCGAGACTTTCTTTGCATGTGCCGCTTTCCCACGAGGCCATGATGACCTTTCCGGCGACGAGGC---AG
TACGACCC------ACTCCGACCAAATCATGGCCTAATCACACGCAAATCCGCAACCTTCCAAGCCCTCCCATCAATCAA
AA-TCGTCCTATATAGTACCGTGCTCCACCCCTCTCCACCGGCTCACCGCAACACGCCTCCCC-----CAGTGCCACTCC
GTTTCCCAAGCACACGCGGCAGCA-------TCATTCACAGGAGAGCTA------GCT-------TAGCTCCCTTCGCTT
CACGTGTCCATCTCCATCCCCGACCACCAACCGTCGCCAACTTGCCATGGACAAGACCTAGCCAGCTCGTGCCTTTTGGT
CCTTGGGAGTTGGGAGAGAGATCCTCCGGAGCTGGCCAAGGCATGGCATTGGAGGCCGTGT---TCTCCCGCGCTGCTGC
TGGTCTCTTCGGTCGCTGCGCCATGGCGGGGACGGGGGCGGGGGGAGCTTGGAATGGTCTCTTCGGTGGGGGCGAAGGGT
TGGCGGGCTTGGACGGCGGGGACTGGGACGCCGCCGCCGCCGCCGCGTTCTCGTCCATGCTGCTGCCTCAAGCTGCGTTC
CAGGAGCTGGATATCTCCGCCGTCGCCGCTGCTACCGCTCCGCAGGAGGAGTCCGTAGGTGGCGGCGAGATGAGCGCGGC
CGGCGTGGGTCAGGATGACGCTGCGCCCGTGGCGGCGGCGGCGACGGGGCGGAGGAAGCGGCGGCGGACGAGGACGGCCA
AGAACTCGGAGGAGGTGGAGAGCCAGCGGATGACCCATATTGCCGTCGAGCGCAACCGCCGCAAGCAGATGAACGAGTAC
CTCGCCGCGCTCCGCTCCCTCATGCCGCCCTCCTACGCGCAAAGGGTAA-CATTCACAGCCGCCATTGGCCTCCTCGACC
CCTTTGCTT-----------------TTGTTACTAAAGTGTGCGCTATTGCTGTGT-CTACGTAGGGTGATCAGGCATCT
ATAGTTGGAGGTGCGATCAACTTCGTCAAGGAGCTGGAGCAGTTGCTCCAGACCCTGGAGACGCACAGGCGGACACGGGA
ACCCGCGGCAGCCGTCG---ACGGCGGGGAAGCGCCGCCACCGCCGTTCGCCAACTTCTTCACCTTCCCTCAGTACTCAA
TGAGCGCTACCTCGGCACCGGCGCCT---CCTCCGGCCACCGATGAGGGTGAGGGTGCCGACGGCTGCCCCGGGGCGGAG
GCGTCCGGATCAAAGCCGTCGGCGGTGGCGGACGTGGAGGTGACCATGGTGGAGAGCCACGCTAACCTGCGGATGCTGTC
CCGGCGGCGGCCGAGGCAGCTGCTGCGGCTGCTGGTGGGGCTGCAGGGCCACCGGCTCACGGTGCTGCACCTCAACATGA
GCAGCGCCGGCCACATGGTGCTCTACTCGCTCAGCCTCAAGGTACGT-----AGC---ACGCCTACACGTTCTCCCCGTA
CAAGTAAACAATTCCGGCTTTTGTGATATGCATGCATATGGCTCTCAGTCCAAGG-GGTTTACGGCAGTAC-----CTAT
ATCTGGTTAGCAATATCATACTGCTTCAGTCTGAAACAAGCTGGTGCCTAGGTTTCCTTGCTTTTTGTATTTTGCGTTGT
CCCGGACAGCAAACGCCTCCAAATTCTCCCAGCTGTTTACTTTAATGGACCTCAGCAAACCTAGCTAAAATTGTCCGGCG
TGTTTCCAGTTGGAACCGCTGTC----TAGTAACTTAAATTACTGATGGGATCGTACGATGTGAGCTGGGGCTATAACCC
TAGGCCTAGTAACAACAG-----C-TTTGCGATTCCTTCCTAAAAATATATACAAGATCACTTAAATGCATCATTCAAGC
TAATTTAGCCCTAGGCGTAATCTGCGTAATCTGATGGCTGGAAATATTTGCAGGTGGAGGACGATTGCCAACTTACCTCC
GTGGATGAGATCGCCACCGCGGCCCATCAGATCGTCGAGAAGATCCAAGAAGAGCAAGAGCTTACTGTGGCGGCTTAGGG
CA-GCATCTCACCTTAC---------ATTATGCAATGCGCAACATTAGTTTATTCTAGCAAGTTAGGTGACTCGTGTGCA
AACCAATAAAGTCCATCTGTGCAATGCAAT--------------------------------------------------
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---------------------------------------------------------------------------GCTTA
CTGCTGAATCCATGGATGAAAAATAATGAATTTGTTCAT--AATGTGCATC---AGTAGATGTTGCATGTAGAGT----A
GCTAGGCATGTGTTGTTTCTTCGGTTTAAAACGCGGGGC------ATGCAAT-------------GCAATGCTTCCAAAC
CACTTCAAAGATGAAGGCAGAGAACAATTCCATGCATGGCA------------GACATGACATATGGCATTCCCTGTGGC
CTACCGTGCTCCATAGGATCGGACACTGTTGTCAGCTGCGCTGTTCCTCAACCTCCTCGGTGCATCCTGTTCCCCCCGTG
AAGCACCATTTCCTGCCAAAACACCAACAGACAACATCTCCCTTTTAGTTCCAAAACGAGTAGTATGACTGATTAGATCC
TTAATCGGGTATACTGGATACTGGATATTAGAGTAATGCATACATATCTTCAGTGTGCCATAACAA----AAGTCCGTTT
CTGTAAAGAAGGTGGAGCCTTTTAGAGAAAGCAGCATAGCACAG--ACATGAGCACGGGTCAGGCAG--------TACTG
AAAAGTGAAAAGCCAATCGATGCCAAGACAAGGAGAAGAGAAGAGCTCCAGAACACAGGGTACGAGT--TGTGCCGTGTC
GTCCCATTGACCCAAGGAAAAAGATTCTAGAACAGGGCGCTTTACCGGAATAGCCTTTTACCATTTCCATGTAAGCATGA
TTGACCGAATAGTGGAGAG----------GGCT-----------GCTCCGTTTCTGCGAACAGCGATGCTCTGCACCCGG
CTGATTCGACCGACGGGACAAAGCACATGCGCAGCTTTGCTCCCATGCAGCATGTCGCGTTCCGCCCCCGAGATGTTCTG
CTCCCATCGATGTAA-CTTCGCCCACGTAAAAGGGTGGAGC------CTCGCCTGGGAGTAAAA---
>chr5D_1
AAGAAACTTATAAACATTTACTGAATGTCAAATAACTCCT-GGTTTTGTGATTAGAACATCTGCATTAGGGGAGAGGGGC
GGACACTAACCATTTTTT-GAATAAACTACCCTTTTAATGGCTTATAAAGTACTGGTACCAAGAAAATATAAACGCAATG
AGTACACAACCAGCATCTACACGATTGAGATACCCAAAACCAATATCAACGCACATACATCAAGGATCACCCTGGTAAAG
AGCAAAGATATACAAGACCTAAGCTATGGCTAAACGGATTA----AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAAGGTACAACAACAATCCACGCCAAGCAGCTATTGAGCCAACGAAAAAGATGGAATCACAT
AGTCTGAACATGGACACAAACAAGCAAACTGGAAACCATGAACACACTAAGCAAAGCCAGCGAGGGTTGTCCG-AACATC
CGTCGATGCACAAATGACGCTAGTCATAAATCAATTGGTGAGAAGAGACGGTACCGCCAAAACCCCAGGTCATCCGCAGC
CCGCCAACGAAGGAGGGCGAGCCCCACCAACAAGCGCCCCACCGCCACCGTCATTGGCACCTGCGCGAGCTTCGTCGATC
ACGGCTACTTGCGGCGGCGACATGGAAGGAAGGGGACATATGTGTTGATGGTGGCGGGCTAGGGCTCCTCCGGGTCGCCA
GATGTGGGTACGC------------GGGGCGCCTCACACTAGCCTCTTGGGAAATTAGAGGCAATGGGTCGGACGCTGCC
ATAAGCGGTAGAGCTTGTTAGGGTGTGATCCCTCTCGATGGGCATGGCC-TCCTGCAGTGAAAGAGTCCCATGGAGGCCG
CCGGCATTTCTTTAGACAAAAG-CCGCCGGCATTGCCTCGCAGTGGCCGGCGATGGCGTCGAT------------CGGCA
CCTCGCTAGAATCGGGCAGCGAGAA-GGGTTTGGGAATGTTGAGGCAATCACCTCAGCACAAGCCAAACACACGTTTATA
CGGGTGGTGCCAGGGAAACCAGGCCAAAACCAAAGTTACATTCGTTGCCCCGATCATGGCACGTAGAACGAGGTTTCGGC
T-CCCCC-------------------------------------------------------------------------
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----------------------------------------------TTTTCTCTTCACGAGCTGAGATCAACAAATTCCA
ACACTGGAAAGTCGAGACTTTCTTTGTATGTGCCGCTTTCCCACGAGGCCATGATGACCTTTCCGGCGACGAGGC---AG
TACGACCCACTCCGACTCCGACCAAATCATGGCCTAATCACACGCAAATCCGCAACCTTCCAAGCCCTCCCATCAATCAA
AA-TCATCCTATATAGTG-----------CCCTCGTCACCGGCTCACCGCAACACGCCTCCCCTCCCCCAGTTCCACTCC
GTTTCCCGAGCACACGCAGCATCA-------TTCATTCATTCACAGCACAGGAGCGCTAGCTAGCTAGCTCCCTTCGCTT
CACGTGTCCATCTCCATCCCCGGCCACCAACCGTCGCCAACTTGCCATGGAGAAGACCTAGCCAGCTCGCGCCTTTTGGT
CCTTGGGAGTTGGGAGAGAGATCCTCCGGAGCTGGCCAAGGCATGGCATTGGAGGCCGCGGTGCTCTCCCGCGCTGCTGC
TGGTCTCTTCGGTCGCTGCGCCATGGCC------GGGGCGGGAGGAGCTTGGAATGGTCTCTTCGGTGGGAGCGAAGGGC
TGGCGGGCTTGGACGGCGGGGACTGGGACGCCGCCGTCGCGGCGGCGTGCTCGTCGATGCTGCTGCCTCCAGCTGCGTTC
CAGGACCTGGATATCTCCGCTACTGCG------------CCGCAGGAGGAGTCCGGAGGTCGCGGCGAGATGAGCGCGGC
CGGCGTGGGTCAGGACGATGCTGCGCCGGTGACGGCGGCGGCGACGGGGCGGAGGAAGCGGCGGCGGACGAGGACGGCCA
AGAACTCGGAGGAGGTGGAGAGCCAGCGGATGACCCACATTGCCGTCGAGCGCAACCGCCGCAAGCAGATGAACGAGTAC
CTCGCCGCGCTCCGCTCCCTCATGCCGCCCTCCTACGCGCTAAGGGTAACCATTAACAGCCGCCATTGACCTCCTCAACC
CCTTTCCTTGGTTATTTACGGAGTAGTTGACACTGAAGTGTGCGCTATTGCTTGGTACTACGTAGGGTGATCAGGCGTCT
ATCGTCGGAGGTGCGATCAACTTCGTCAAGGAGCTGGAGCAGCTGCTCCAGACCCTGGAGACGCAGAGGCAGACACGGGA
ACGC---GCGGCCGTCG---ACGGCGGGGAAGCGCAGCCACCGCTGTTCGCCAACTTCTTCACCTTCCCGCAGTACTCAA
TGAGCGTTACCTCGGCACCGGCGCCT---CCTCCGGCGAACAACGAC---GAGGGTGCCGACGGCTGCGCCGAGGCGGAG
GCGTCCGGATCAAAGCCGTCGGCGGTGGCGGACGTGGAGGTGACCATGGTGGAGAGCCACGCCAACCTGCGGATGCTGTC
CCGGCGGCGGCCGAGGCAGCTGCTGCGGCTGCTGGTGGGGCTGCAGGGACACCGGCTCACGGTGCTGCACCTCAACATGA
GCAGCGCCAGCCACATGGTGCTCTACTCGCTCAGCCTCAAGGTACGT-----ACGCCTACGCCTACACGTTCGCCCCGTA
CAAGTAAACAACTCCGGCTTTTCTGATATGCATGCATATGGCTCTCAGTCCAAGG-GGTTTATG---GCAGTACCTCTAT
ATCTGGTTAGCAATATCATACCGCTTCAGTCTGAAACAAGCTGGTGCCTAGGTTTCCGTGCTTTTTGTATTTTGCGTTGT
CCCGGACAGCAAACGCCTCCAAATTCTCCCAGCTGTTTACTTTAATGGACCTCAGCAAACCTAGCTAAAAC-GTCCGGCG
TGTTTCCAGTTGGAACCGCTGTC----TAGTAACTTAAATTACTGATGGGATCGTACGATGTGAGCTGGGGCTATAGCCC
TAGGCCTAGTAACCATATATAGTC-TTTGCAATTCCTTCTTAAAAAATACACAAAATGCAT-------------------
-------------GGCGTAATCTGAC----------GCTAGTAATATTTGCAGGTGGAGGACGATTGCCAACTTACCTCC
GTGGATGAGATCGCCACCGCGGCCCATCAGATCATCGAGAAGATCCAAGAAGAGCAAGACTTCACTTCAGCTTAGAGTAG
CATGCATCTTACCTTATAGTAGTATTATTATGCAATGCGCAACATTAGTT-ATTCTAGCAAGTGAAGTGACTCGTGTGCA
AACCAATAAAGCTCATCACTGCCTACTGTTGGAATAAGCCACGGCGTGTGTGGTCGAGCTCGTCGGGCGCGTCGGATGCG
CGCGGGACGGGCGGGATACACTGGTGCCGTCGGGCTCGTCGGGTTCGTCTGGCGTGTCGGTGACGCGCGGAATGGGCGGG
ACGTGCGGGGCGCAGCGAAAGCATGGCGAGTGTGCGTGTGTAGCATGTGTGTGCATGTAGTGGTAGTCAGTGCATGCATT
GTTGATTAGTCCGTGCATGCAACGGATAGATAAGCTACCTACTTGCGTGGGCCGGTCGAGTAAGTTTGTTAGTGCATGGG
TGGATTAGTTAGCTAGTGGCCGGAAGTGGTGCGTGCATGCATGGATTAGTGGCAATGGCCGGGCTGAGTTTGTGCTAAGG
GAAAAAGGTGTTCGTGCGCCTGGAAACTTGCCGTGTCCTTGTTCTTCCTTCTACTTCCTCCTTCTTCTTCTGTTGATCTA
GTTCAGAGAAAGAGAGAGAGGTGCAGCGTGAGGGAGAGGTAAAGCTAGGGCATAACCACGGCAACAACAATTGGTATACA
GAGCTTCGGTTCGGACGATCACCGGCGACCATGGCGCTCGTCCCACACGGCGGCGGCGCGGGCGGATCGCTGACGATGGC
AATGCCGATGCTGACCGCGGACAACTACACGGTCTGGGCCATCAAGGCGCAGGCGATCCTCGACGTCCACACCGTATGGG
AGGCGGTGGCGCCGGGCGACGCGGCGGTGAACGCGCGGAAGGACAAGATGGCGCGCGCGTTGCTTCTCGGGGCGTTGCCG
GAGGATGTGCTGCTGCAGGTGTCGACGAAGCTCACCGCCAGGGAGGTATGGGACTCCCTGAAGGTGAGGTTCATCGGCGC
CGATCGGGTCCGTGCGGCGAGGCTGGCGACGCTGCGCGGCGAATTTGACCGCCTAAAGATGGCGGACGGTGAGGAGCTCG
ACGTGTACGGCGGGAGGCTCGCGGCGATGGCGGCGAGGTACGCCAACCTCGGGGAGACGCTGGGCGACGCGGCGCTCGTC
AAGAAGCTGCTGGATACAGTGCCGGATCGGCTCTTCCCCGTCGTCGCCGGCATCGAGCAGTTCCACGACGTTACGACGAT
GGCGTTCGACGAAGTGCTCGGGCGGCTGCATGCGTTCGACGAGCGAGTTCGGCGTCGACGGCAGGACAGCGGCGAGTGGG
CGGACGGACAGCTCCTGTTCACGGCGGCACAGTGGCGGGCGCGAGAGCGGCAGCAAGGCGGAGCACGGGACGATGACAAC
GGGTGCAGCGTGGCGTCGGGGAGCGGCGGCAACAGCTGCAAGCGCTGCTACAAGTGCGGGGAGCACGGGCACTTCCGGCG
CGAGTGCCCACAGCTGCGGAAAGGACTGGCGGCGGAGCAGGCTCTCTTGACCGGTGCCAACGTCGACGACAACAGACTCC
TCTTGGTCGTGGCTTAGGGGGTGTGTGTTGGAATAAGCCACGGCGTGTGTGGTCGAGCTCGTCGGGCGCGTCGGATGCGC
GCGGGACGGGCGGGATACACTGGTGCCGTCGGGCTCGTCGGGTTCGTCTGGCGTGTCGGTGACGCGCGGAATGGGCGGGA
CGTGCGGGGCGCAGCGAAAGCATGGCGAGTGTGCGTGTGTAGCATGTGTGTGCATGTAGTGGTAGTCAGTGCATGCATTG
TTGATTAGTCCGTGCATGCAACGGATAGATAAGCTACCTACTTGCGTGGGCCGGTCGAGTAAGTTTGTTAGTGCATGGGT
GGATTAGTTAGCTAGTGGCCGGAAGTGGTGCGTGCATGCATGGATTAGTGGCAATGGCCGGGCTGAGTTTGTGCTAAGGG
AAAAAGGTGTTCGTGCGCCTGGAAACTTGCCGTGTCCTTGTTCTTCCTTCTACTTCCTCCTTCTTCTTCTGTTGATCTAG
TTCAGAGAAAGAGAGAGAGGTGCAGCGTGAGGGAGAGGTAAAGCTAGGGCATAACCACGGCAACAACACCTACCAGCTTA
GTGCTGAATCCATGGATGAAAAATAACGAATTTGTTGATAAAATGTGCATC---AG-TGGTGTTGCATGTAGAGTAGCCA
GCTAGGCATGTGTTGCTTCTTCGGTTCAAAATGGGGGGGCATGCAATGGAAT-------------ACAATGCTTCCAGAC
CAGTTGAAAGTTGAAGGCAGAGAACAATTCCATGCATGGTGGACAACTGGCTGGACATGACATATGGCATTCCTTGTGGC
CTACCGTGCTCCATAGGATCGGGCACTGTTATCAGCTGCTCT-TTCCTCAACCTCCTCGGTGTATCCTGTTCCCCCCGTG
AAGCGCCATTTCCTGCCAAAGCACCAGCAGACACCATCCCCCTTTTAGTTCC-AAACGAGTAGCATGATTGATTAGATCC
TTAATCGGGTATACCGGATACCGGAGTAGTGTAGGAGTATTTCATATCTTCAGTGTAC---AACAA----AAGTCCGTTT
CTGCAAGGAAGGCGGAGCCTTTTAGAGAAAGCAGCATAGCACAGGGACACGAACACAGGCCAGGCAG--------TACTG
AAAAGCCA----ATG---GATGCCAAGACAAGCAGAAGAGAGGAGCTCCAAAACACAGGACGCTTTACCTGTGCCGTGTC
GTCCCATTGACCCAGGGAAAAAGATTCTAGAACAGGGCGCTTTACCGGAATAGCCTTTTCCCATTTCCATGTAAGCATGA
TTGACCGAATAGTGGAGGGGGGCTGCAGAGGCA-----------GCCCCGTTTCTGCGAACAGCGATGCTCCGCACCCGG
CTGATTCGACCGACGGGACAAAGCACATGCGCAGCTTTGCTCCCATGCAGCATGTCGCGTTCCGGCCCCGAGATGTTCTG
CCCCAATCGATGTAAACTTCGTCCAGGTAAAAGGGTGGAGC------CTCGCCTGGGAGTAAAAAA-
>SNPs
-----------------S----------------------S---------------------------------------
--------S---------------------S--------S-----------------------------------SS-S-
SSSS-SS-----------S-------------------------------------------------------------
S---------------------------------------SSSSS-----------------------------------
-------------------------S-S-SSSSSSS--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S-------------------S---------------------SSSSSSSSSSSS-----
-------S-----------------S--S--S----------------------------------S-------------
---------------------S------S--S------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
-----------------------SS-----SS-------------------------S-----------------SSS--
--------------------------------------------------------------------------------
--S-------------S-------------------------------------------------------S-------
---------------S--SSSSSSSSSSSSS---S---------S---S---------S---------------------
---------S---------------------------------------------------------------S------
-S------------S---------S------S-S-S--------------------------------------------
-------------------------------S----------------------------S-----S--S----------
--------------------------------------------------------------------------------
-----------S-----------------SS--S----------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
-----------------S------------------------------SS------------------------------
--------S----S----S-----------------------S----------S-------------------------S
-----------------------------------------------------S------------------S-S-----
--------------S--SSS----------------------------------------------------------S-
-------S---S----------S--SSSS--------------------------S------------------------
-----S--------------------------------------S-----------------S-----------------
--------------------------------------------------------------------------------
-----------------------------------------------SSSSS-------------SS-------------
------------------------------------------S------------S----------------S-------
-----------------------------S--------------------------------------------------
--SS-------------------------------------S--------------------------------------
---------------S-------SSSS---------------------S----------------SS-------------
------------------------S----S--------------------------------S--S--------------
-------------------------S------------------------------------------------------
-----S-----------------------------------------S--------------------------------
--------------S----------------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------SSS----------S---------------
----------------------S-----------------------------SSSSSSSSSSSSS---------------
-S------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
----------S------------------------------------------------------S---------S----
--------S------SSSSSSSSSS--------------------S-------S--------SS--SSSS----------
-------------S---------------------S-------------------------------SSSSSSSS-----
S--------SS-------------------------------------------S-------------------------
--------------------------------------------------------------------------------
-----------------S-------------SSSSSSSSSSSSS------------------------------------
-S-------------------------------------------------S----------------------------
------------------S-------------------S-SSSSSSS-------------------S
>forward_952
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------ATGGCGTCGATCCTCGTTTT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>reverse_2450
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------GTTAACAGCCGCCATTGACC-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>forward_1935
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------------------------------TTGGT
CATTGGGAGTTGGGG-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------
>reverse_3668
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------CGACTCGTGTGCA
AACCAAT-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------
