>input_sequence_47328
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------ATGTCGGAACATTCTGAGAGCACGGCCGAGAAGCTCATGGGCA
ACATCATGGATACCATTGCTGACAGGCTCCCCAAGCAGAAGTCTGACAACATCATGAGCAACATCATGGATACCATTTCT
GACAAGCTCCCTAAGCAGAGATCTGGCCGTTTCGATCCAGGCTCAGTCGCTGATGTGAAGAACAAGATGTTTGGTCGTCA
GAGGTCTCTCCATGGAGTTTTGGGTGGTGGAAAGTGTACGT-----TATCTGCTCATCTGCTTACTTACGTTTTCTTCTC
CTGGGCATCTCTGAGGCTTTTC-TTTTGTCATTGTAGCTGCTGATGTGTTGTTATGGAGGAACAAGAAGATATCTTCCAG
TGTTTTGGGTCTTGCAACAGCTATCTGGGTCTTCTTTGAGTGGCTTGATTACCACTTCTTGACAATCATTTCATTTGCCC
TTGTTCTTGGAATGGTGGTTCAGTTTGTTTGGTCCAACTTTTCAAGGTATGGAATTTTTGAAGTGTATGCACACTATGTG
TCCTTTTCAGCAACATAGCAATAATAATAATAGAAAATGCATTGTCTACATGTAGGTCTTCTGAAATACCCCGGGTTAAG
TTGCCAGAGGACCTGTTTGTGAACATTGCTGTTGCCATCGGTGCCCAAGTAAACAAGTTCCTTGGTTTCCTTCAAGATGT
GTCTTGTGAAAGAAACTTGAAGCATTTTGTATTGGTACGTAGAGCTTTACTGTGTTCTTTTTGTATTCCCTCATT-GTGA
TCATTACATCAAATAGGAAAATATAAAGAAAACCAGTTCTGCCTAACAATGCTCATTCTGCCTAACTGTTTTGCCCTTGA
TATCATCATCATGGCTTGCTGGAATATCTGGATTCAGAGAAACTAAAAAATCTTCAAAAATGGTCTGCCCAGTGTCTCTA
TTTGGAGGCACTTGCTTAAGAACTATCTGCTTCTCATATCACACATAATCAAAAGCAAGCATATCAGAGTTCAGGAATTG
GATTGATCTTCATCTCTGTTTAAACCTAGATGGATTTCCACAAAACTGGAATTGGTGGAGCCCAAGGCTTTTTTTAGGGT
TGTACATATACTTTATTTATATATGAAAATACCGTAGAATGCATCTTCTATGGTTCAGGGTTCAAAAAAGGAAAAACATA
AAAATCAATTCTGCATGTGGATAT--TGTGTCTGTTCATCATCAAGAGATGTTTTGATATCACGCTATGTTTTATTTCAG
GCAATTGTTGGGTTGTGGTCTGCTTCTGTAGCTGGTAGCTGGTTCAATTTCCTGACCGTTATTTACATTGGTAAGAAGCT
ATAACATTTATTTCTCTCCC--------C--TTTTTTTGCAACTGAGAAACAACATAACTGTTCCTATTTCGCGAAAGCA
TGCGTTCCGCTGCTTGCATTGATGAAAACAACACCTGGTTTTGCCTGGAACAGGGTTTGTGTGCGCTCACACGCTCCCTG
TGCTTTACGAGAAGTACGAGGACCAGGTCGACGACTTCCTCTACAGCATCCTGGGCCTGCTCCGGGACCAGTACCAGAAA
CTCGACAGCGGCGTCCTGAGCAGGATACCCACCAAGAGGAACAAGAAGAGAGAGTAG-----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>chr5B_1_TraesCS5B01G420300
CGGGAGCGGGAGCCGCCTGCTAAGCTCCCTCGCGCCCCTCCTCGGTACGGTCTCTCTCCGGCGGCTCTGCTGCTGGAGCC
CAAGTTGTTTTGCTGCCGCGATG----TGGAATCTGAGCCGCTTTCCTTGGTTA----TTTGTTGTTTTTCTTGAAAGC-
---GATAGAGCGGCTTTGCTGGACGGAAAGCTAGGTAGATTTGTGAGTTCTTTATAGGATAAGA--AAACT--TTCGGGG
TAAACATGGTTTGCCTGGGTAGTTTGTTTTTTTTTTTTTTTTTTTCGTCCCTTTTTTGCTGACCGGG---TTAGCAGATG
GGTTCTGAATATGCTTCTATTGCGGGTAAGAAGAAGAGATGAACGGCCTTCTCTGGCGATTTTGCCCTCCTTCCC-TCGG
TTGCTTCGCCAATCAATCCAACGAGTTCTTAGTTTG----ATGTTTGATCCATAAAGTACTGGTCTTTATCTTGTTAGAT
TCGGTTGAACGGGACGGTTATGTTGTTG-TTGCAGTGATTTTGGTGGTACATAACTGAATGCCGATTTCAATGTTGATCC
ATAA------------------------AGTATATGTTTGGACAATAATTGCT--AAAAAGTGTTTGTCAAGTCATATAT
TTCGCTTGGATGGGGTGCTCTGGTGTACCAGATTGTTCATTTA---TGAAAGCG---TTGGTCAGAAATGAATGATGAAA
GGCTGGTCCCTGAATGAATGGCTATTGATTGTTAAACAGTCATCCAACTCAACTTACC----------------------
------------------------------------------------------------AGTCAGCCTGAGAGTCATAG
CAAACAGTAATAACATAATCGTGTACTCCACGCTTTAGGCCGAAAGGTTGAAT--ATAGTTCTAAACTTCCAG----TGA
AGTATGTCGAAGCAAAGTG-ATTGGCCCAATTTCTTATACCAGACTTAATATTCTCATTTATCATGTTTTTTTCTGTCCT
GCTTCCCTCTATATGCTCTTGTCAG-TTGGTCTGTCCTATACATTTCTTGGATATCA----------TAGTGTTTGACAT
ACCATCCTACTCCACAGCGAGCTCGAAATACCTGAAGATGTCGGAACATTCTGAGAGCACGGCCGAGAAGCTCATGGGCA
ACATCATGGATACCATTGCTGACAGGCTCCCCAAGCAGAAGTCTGACAACATCATGAGCAACATCATGGATACCATTTCT
GACAAGCTCCCTAAGCAGAGATCTGGCCGTTTCGATCCAGGCTCAGTCGCTGATGTGAAGAACAAGATGTTTGGTCGTCA
GAGGTCTCTCCATGGAGTTTTGGGTGGTGGAAAGTGTACGT-----TATCTGCTCATCTGCTTACTTACGTTTTCTTCTC
CTGGGCATCTCTGAGGCTTTTC-TTTTGTCATTGTAGCTGCTGATGTGTTGTTATGGAGGAACAAGAAGATATCTTCCAG
TGTTTTGGGTCTTGCAACAGCTATCTGGGTCTTCTTTGAGTGGCTTGATTACCACTTCTTGACAATCATTTCATTTGCCC
TTGTTCTTGGAATGGTGGTTCAGTTTGTTTGGTCCAACTTTTCAAGGTATGGAATTTTTGAAGTGTATGCACACTATGTG
TCCTTTTCAGCAACATAGCAATAATAATAATAGAAAATGCATTGTCTACATGTAGGTCTTCTGAAATACCCCGGGTTAAG
TTGCCAGAGGACCTGTTTGTGAACATTGCTGTTGCCATCGGTGCCCAAGTAAACAAGTTCCTTGGTTTCCTTCAAGATGT
GTCTTGTGAAAGAAACTTGAAGCATTTTGTATTGGTACGTAGAGCTTTACTGTGTTCTTTTTGTATTCCCTCATT-GTGA
TCATTACATCAAATAGGAAAATATAAAGAAAACCAGTTCTGCCTAACAATGCTCATTCTGCCTAACTGTTTTGCCCTTGA
TATCATCATCATGGCTTGCTGGAATATCTGGATTCAGAGAAACTAAAAAATCTTCAAAAATGGTCTGCCCAGTGTCTCTA
TTTGGAGGCACTTGCTTAAGAACTATCTGCTTCTCATATCACACATAATCAAAAGCAAGCATATCAGAGTTCAGGAATTG
GATTGATCTTCATCTCTGTTTAAACCTAGATGGATTTCCACAAAACTGGAATTGGTGGAGCCCAAGGCTTTTTTTAGGGT
TGTACATATACTTTATTTATATATGAAAATACCGTAGAATGCATCTTCTATGGTTCAGGGTTCAAAAAAGGAAAAACATA
AAAATCAATTCTGCATGTGGATAT--TGTGTCTGTTCATCATCAAGAGATGTTTTGATATCACGCTATGTTTTATTTCAG
GCAATTGTTGGGTTGTGGTCTGCTTCTGTAGCTGGTAGCTGGTTCAATTTCCTGACCGTTATTTACATTGGTAAGAAGCT
ATAACATTTATTTCTCTCCC--------C--TTTTTTTGCAACTGAGAAACAACATAACTGTTCCTATTTCGCGAAAGCA
TGCGTTCCGCTGCTTGCATTGATGAAAACAACACCTGGTTTTGCCTGGAACAGGGTTTGTGTGCGCTCACACGCTCCCTG
TGCTTTACGAGAAGTACGAGGACCAGGTCGACGACTTCCTCTACAGCATCCTGGGCCTGCTCCGGGACCAGTACCAGAAA
CTCGACAGCGGCGTCCTGAGCAGGATACCCACCAAGAGGAACAAGAAGAGAGAGTAGACTAGATCAGATCAGATGGACAC
TCATGATTTATCGAGTGAAATCCC------------TGCTATTATTCTGCCTAGTTTGTGTGCTGCAGCCCTGTAGTGTG
TCTCAATTGTCATGTGAGAGCATTTGTGCTCAGGTGCTTCCTGAACAGAACCAGAACGCTGGTTTAAATTCAACCGCGAC
GCATGCGTCTGTTCTCCCAT---TTATTTGTGGGATGCTGCTCAACAAAATTGGTGAGACCATAAGTTGTCTGCATATAC
TGGAAGTTGAGCTCAAATTCGTTGTGCTTTGTCAGAAA--------------------AGAATTGCTCGCTGCCAGGTCC
AAATTTGTGATCGCG---ATTTTA-TTTTCGGGGATTGAGATCCACATCCATTCTGTCCATGCCCAAATTTTTTGCATTC
TGTCGAAAAATCTGGTCAAAGGGTGCAGATTAAGCACCAGATTTGGGAGGCAGAAGCTGACCCAGGTTGTTAGTTTTCAG
GTGGTGTTGCGGCTGCACGCCTCCGGCATGCACCCTGAGCTGCTGTAAAAAACCATGAGATGATTGAG-AAATCGGAGTG
CAGGGCAGCTCACCATGATCCAACCTACCCCCAGCTCCAAGCTCCTAAATTACCTCGCTATAAAACCTGCGTTGCCCACT
CCTCTCCTCCTCACCACCTCGCCGGCGAGAACAGCCAAGGAGCCAG--AGAGCAGAGCGAGCCATGGAGCAGAGCAAGCC
GTCCGTCTTCCTCGGCCTCCTCGTGCTCCTGGCCTGCGCCGGGTGGGGGCACGGCATGCGCCTCCTCCACGAC------G
ACAGCGTCGGCGACGAGGAGTACGCCCGGGAGTTCGCCTTCGGCTCCATGGAGGCCGCGGCGACCGAGACCGCGCCGCAG
GACGCGTCCTTGGACGACTACGAGGACGAGATCAGCCGGGTGGAGTTCGAGCCGGGGCGCGGCGCGTCCTACGACGCCAC
GGTCGC---------GCCCGGGCCTGCCCCGGGGCCGGCGACGGCGGGGAGCGACGCGGCCGCCGCAAGGACAG
>chr5A_15
--------------GCCCGCTGAGCTCCCTCGCGCCCCTCCTCGGTACGGTCTCTCTCCGGCGGCTCTGCTGCTAGTTTG
GGTTGT-TTTTCCTGCGGCGATGTGGATGGAATCTGAGCCGCTTTTCCTGTTTGCTCGTTTGTTGTTTTTCCTGAAAGCG
ATGGAGAGAGCGGCTTTGCCGGACGGAAAGGTAGGTAGATTCGTGAGTTCTT--TAGGATAAGAAGAAACT--TTCGGGG
TAAACATGGTTTGCCTGTGTAGTTT---------------TTCTTCGTCCCTTTTCTGCTGATCGGATTATTAGCAGACG
AGCTCTGAATATGCTTCTGTTGTGGGTAA--AGAAGAGATGGGCGGCCTTCTCTGCTGATTGTGCCCTCG---------G
TTGCTTCCGCAACAAAGCCAAGGACTTGTAGATTGAT---ATTTTTGATCCATAAAGTACCGGTCTTTATCTGGTTAGAT
CCCCTTGAAGGGGACGGTTTTGGTGGTGTTTGCAGTGATTTTGGTGGTGCATAACTGAATGTCATTTTTCTCTCGCTTAA
CATGATTCAAAAAAAAATAGTACGTAGTAGTATATATTTGGACAATAATTGCTCAAAAAAGTGTTTGTCAGGTCATATAT
CATGCCTGAATGGGGTACCCTGGTGTACTAGATTGTTCATTTA---TGATGGAAGTTTTGGTCAGAAATGAATGATGAAA
GGCTGGTCCATGAATGAATGAATATTGAATGTTAAACAGGCATCCGACTCAACTTACCAGTCAGCCTGAGAGAGAGTCCT
AGCAAACAGTAATAACTTACAAGTCAGCCTGAGAGTCCTAGCAAACAGTAATAACTTACAAGTCAGCCTGAGAGTCCTAG
CAAACAGTAATAACATAAGCATGTACTACACGCTTTAGGCCCAAAAGTTGAATGTATGGTTCTAAACTCCCAG----TAA
AGTATGTCAAAGCAAATTGCATTGGTCCGATTTCTGATCAGACTCATATATTTTACTACCATGT--TTTTTCTCTGTCCT
GCTTCTCTGTATATGCTCTTGTCAGCTTGGTCTGCCCTATACACGTCTTGGATATCACGGGATCATA-----------AT
ACCATCCTACTTCACAGTGAGCTCGAAATACATGAAGATGTCGGAACATTCTGAGAGCACGGCTGAAAAGCTCATGGGCA
ACATCATGGATACCATTGCTGACAAGCTCCCTAAGCAGAAGTCTGACAATATCATGAGCAACATCATGGATACCATTTCT
GACAAGCTCCCTAAGCAGAGGTCTGGCCGGTTCGATCCTGGTTCAGTCGCTGATGTGAAGAACAAGATGTTTGGTCGTCA
GAGGTCCCTCCATGGAGTTCTGGGTGGCGGAAAGTGTACGTCATCTTATCTGCTCATGTGTTTACTTACGTTTTCTCCTT
GTGGGCATTTCTGATGCTTTTC-TTTTATCATTGTAGCTGCTGATGTGTTGTTATGGAGGAACAAGAAGATATCTTCCAG
TGTTTTGGGTCTCGCGACAGCTATCTGGGTTTTCTTCGAGTGGCTTGATTACCACTTCTTGACAATCATTTCATTTGCCC
TTGTTCTTGGAATGGTGGTTCAGTTTGTTTGGTCCAACTTCTCAAGGTATGGAATTTTTGAAGTGTATGCACAGTGTGTG
TCCTTTTCAGCAACATAGCAATAATAATAATAGAAAATGCCTTGTCA--ATGTAGGTCTTCTGAAATACCCCGGGTTAAG
TTGCCAGAGGACCTGTTTGTGAACATTGCTGTTGCCATCGGTGCCCAAGTAAACAAGTTCCTTGGTTTCCTTCAAGATGT
GTCTTGTGAAAGAAACTTGAAGCATTTTGTATTGGTACGTAGAGCTTTACTGTGTTCCTTGTGTATTCCGTCATTGGTGA
TCATTACATCAAATAGGAAAGTATAAAGAAAA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----TCAATCCTGCATGTGGAAATACTGTGGCTGTTCATCATCAGGCGATGTTTTGATGTCACGCCATGTTTTATTTCAG
GCAATTGTCGGATTGTGGGCTGCTTCTGTGGCTGGGAGCTGGTTCAACTTCCTGACTGTCATTTACATTGGTAAGACCGT
AAGAAGCTGTAGCCTCTCATTTCTCTGACTTTTTTTTTGCCATCGAGAAATAACAT-ACTGTTCCTGTTTTGCGAATGCA
TGTATTAA----CTTGTAAA--------CATTTTCTGATCA--CCTGGAACAGGGTTCGTCTGTGCGCACACGCTCCCTG
TGCTGTACGAGAAGTACGAGGACCAGGTCGACGACTTCCTCTACAGCATCCTGGGCCTGCTCCGAGAGCAGTACCAGAAA
CTCGACAGCGGCGTCCTGAGCAGGATGCCCACCAAGAGGAACAAGAAGAGCGAATAGATTAGATCGGAGGG------CAC
TCATGATTTATCGAGTGAAATCCC------------T--------TCTGCCTAGTTTGTGTGCTGCGGACCTGTAG----
-------TGTCATGTGAGAGCATGTGTGCTCAAGTGCTTCCTGAACAGAACCAGAACGCTGGTTTAAATTTAACCGCGAC
GCTTGCGTCTGTTCTCCCAG---TTATTTGTGGGATGCTGCTCATATATTG-----------GAAGTTGTCTGCATATAT
TGGAAGTTGAGCTCAGATTCGTTGTGCTTTGTCAGAATG-------------------AGAATTGCTTGCTGCCATATCC
AAATTTGCGATCGCGGTGATTTTA-GTTTCGGCGATTGCGATGAACACTCATGCTCTCCATGCGCAAATTTCTTGCGTGC
TGTCGAAA-ATCTGGTCAAAGGGTGCAGGTTAAGCACCGGATTTGGAAGTCAGAAGGTGACCCAAGTTGTTAGTTTTCAG
GTGGTGTTGCTGTTGCACGCCTCCGGCATGCACCTGGAGCTGCTGGAAAAACCCATGAGATGATTTAC-AAATCGGAGTG
CA-GGCAGCTCACCATGATCCAACCTACCCCCAGCTCCAAGTTACCAGTC-ACCACGCTATAAAACCTGCACCGCTCACG
CGTCTCCCACTCACCACCTCGCCGGCAAGAACAGCACCCACGGAGCTAAGAACAGAGCGAGCCATGGAGCAGAGCATGCC
GTCCGTCTTCCTCGGCGTCCTCGTCCTCCTGGCCTGCGCCGGGTGGGGGCACGGCGTGCGTGTCCTCCACGACAACGACG
TCGACGCCGAGGG------GTACGCCCAGGAGTTCGCCTTCGGCTCCATGGCCGCCGCG------GAGACCGCGCCGCAG
GACGCGTCCTTGGACGACTACGAGGACGAGATCAGCCGGGTGGAGTTCGAGCCGGGGCGCGGCGCGTCCTACGACGCCAC
GGTCGCCGCAGCCGCGCCCGGGCCTGCCCCGGGACCGGCGACGGCGGGGAGGGACG------------------
>chr5D_143
--------------------------------------------------------------------------------
----------------------------------------------------------------------CTTGAAAGC-
---GATAGAGCGGCTTTGCTGGACGGAAAGGCGGGTCGATTT----GTTCTT--TAGGATAAGAAAAAAAAACTTTAGAG
TACCTATACTTAGCCTGGTTAGTTATTTTTTTTTTCTGACTGG--------------------------ATTAGCAGATG
GGTTCTGAACATGCTTCTGTTGTGGGTACAC--AAGAGATGGATGGCCTTCTCTGCCGATTTCGCCCTCGTTCCCTTCGC
TTGCTTCGGCAATAAATCCAACGAGTTCTTAGTTTGATCGATGTTTGAACGATATAGTACTGGTTTTTATCTGGTTAGAT
TCGGTTGAACGGGACGGTTATGTTGTTGTTTGCAGTGATTTTGGTGGTACATAACTGAATGCCGATTTCAATGTTGATCC
ATAA------------------------AGTATATATTTGGACAATAATTGCTCAAAAA-GTGTTTGTCAAGTCATATAT
TATGCCTGAATGGGGTACCCTGGTATACCAGATTGTTCATTTATGATGAAAGCG---TTGGTCAGAAATGAATGATGAAA
GGCTGGTCCATGAATGAATGCCTATTGATTGTTAAACAGCCATCCGACTCAACTTGCCAGTCAGCCTGAGAGAGAG----
------------------------------------------------------------------------AGTCCTAG
CAAACAGTAATAACATAAGCATGTACTACACGCTTTAGGCCGAAAGGTTGAATGTATACTTCTAAACTTCCAGTAAATAA
AGTATGTCAAAGCAAAGTGCATTGGCCCAATTTCTTATATCAGACTAAATATTCTACTTTATCATG-TTTTTTCTGCCCT
GCTTCCCTGTATATGCT--------CTTGGTCTGCCCTATACATGTCTTGGATATCAATGGATATCATATTGTTTGACAT
ACCACCCTACTCCACAGTGAGCTCGAAATACCTCAAGATGTCGGAGCATTCTGAGAGCAAGGCTGAAAAGCTCATGGGCA
ACATCATGGATACTATTGCTGACAGGCTCCCCAAGCAGAAGTCTGACAATATCATGAGCAACATCATGGATACCATTTCT
GACAAGCTCCCTAAGCAGAGGTCTGGCCGTTTCGATCCAGGCTCAGTCGCTGATGTGAAGAACAAGATGTTTGGTCGTCA
GAGGTCCCTCCATGGAGTTTTGGGTGGCGGAAAGTGTACGTC-----ATCTGCTCATGTATTTACTTGCGTTTTCTTCTT
GTGGGCATTTCTGAGGCTTTTCTTTTTATCATTGTAGCTGCTGATGTGTTGTTATGGAGGAACAAGAAGATATCTTCCAG
TGTTTTGGGTCTCGCAACAGCTATCTGGGTTTTCTTCGAGTGGCTTGATTACCACTTCTTGACAATCATTTCATTTGCCC
TTGTTATTGGAATGGTGGTTCAGTTTGTTTGGTCCAACTTCTCAAGGTATGGAATTTTTGAAGTGTATGCACAGTGTGCG
TCCTTTTCAGCAACATAGCAATAATAATAATAGAAAATGCCTTTTCTACACGTAGGTCTTCTGAAATACCCCGGGTTAAG
TTGCCAGAGGACCTGTTTGTGAACATTGCTGTTGCCATCGGTGCCCAAGTAAACAAGTTCCTTGGTTTCCTTCAAGATGT
GTCTTGTGAAAGAAACTTGAAGCATTTTGTATTGGTACGTAGAGCTTTACTGTGTTCTTTTTGTATTCCGTCATT-GTGA
TCATTACGTCAAATAGGAAAGTATAAAGAAAA------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----TCATTCCTGTATGTGGAAATACTGTGTTTGTTCATCATCAGGAAGTGTTTTGATGTCACGCAATGTTTTATTTCAG
GCAATTGTTGGATTGTGGGCTGCTTCTGTAGCTGGGAGCTGGTTCAACTTCCTGACTGTCATTTACATTGGTAAGACCGT
AAGAAGCTGTGGCCTCTCATTTCTCTGAC--ATTTTTTGCCACCAAGAAATAACAT-ACTGTTCCTGTTTCGCGAATGCA
TGTATTAA----CTTGTATTAATGAAAGCATTTTCTGATCA--CCTGGAACAGGGTTTGTCTGCGCGCACACGCTCCCTG
TGCTGTACGAGAAGTACGAGGACCAGGTCGACGACTTCCTCTACAGCATCCTGGGCCTGCTCCGAGAGCAGTACCAGAAA
CTCGACAGCGGCGTCCTGAGCAGGATACCCTCCAAGAGGAACAAGAAGAGCGAGTAGATTGATT-AGATCAGATGGACAC
TCATGATTTATCGAGTGAAATCCCAGCTATTATTTAT--------TCTGCCTAGTTTGTGTGCTGCAGACCTGTAGTGTG
TCTCAACTGTCATGTGAGAGAATGTGTGCTCAAGTGCTTCCTGAACG------GAACGCTGGTTTAAATTCAACCGCGAC
GCATGCGTCTGTTGTCCCATTTATTATTAGTGGGATGCTGCTCAACAAAC-TGGTGAGACCAGAAGTTGTATGCATATAT
TGGAAATTGAGCTGAAATCCGCTGTGCTTTGTCAAAAACCATGTTCCCGCGAGGAACCAGGATTCTTCACTAACATGTCC
AAATTTGAGATTGTG---ATTTTATTTTTCTGTGATTACGATCCACATTCATGCTGTTCGTGCCCAAATTTCTTGCATTC
TGTCGAAA-ATCTGGTCAAAGGGTGCAGATTACACACCAGATTTGGGAGTCAGAAG------CAAGTTGTTAGTTTTCAG
GTGGTGTTGCGGTTGCACGCCTCCGGCATGCACCTTGAGCTACTGAAAAAAACCATGAGATGATTGATAAAATCGGAGTG
CAGGGCAGCTCACCATGATCCAACCGACCCCCAGCTCCAAGCTACGAGC-TAGCTCGCTATAAAATCTGTACTGCCT---
CGTCTCCCACTCACCACCTCGCCGGCAAGAACAGCCAAGGAGCCAG--AGAGCAGAGCGAGCCATGGAGCAGAGCAAGCC
GTCCGTCTTCCTCGGCCTCCTCGTGCTCCTGGCCTGCGCCGGGTCGGGGCACGGCATGCGCCTCCTCCACGACATCGACG
ACAACGTCGGCGACGAGGAGTACGCCCGGGAGTTCGCGTTCGGCTCCATGGCGGCCGCGGAGACCGAGACCGCGCCGCAG
GGCGCGTCCTTGGACGACTACGAGGACGAGATCAGCCGGGTGGAGTTCGAGCCGGGGCGCGGCGCGTCCTACGACGCCAC
GGTCGCCGCAGCCGCGCCCGGGCCTGCCCCGGGGCCAGCGACGGCGGGGAGCGACGCGGCCGCCGCAAGGACAG
>SNPs
SSSSSSSSSSSSSS---S---S----------------------------------------------------S-SSSS
SSSSS-S----S----S----------------------------S-S--S--S--------------------------
------------------------------S---------------------SS--------------------------
-------------------------S---------S-SSS--S------------S------S---S-------------
------------------S---S------SS----------S-------------S-------------S----------
--------S----S----------------------------------------------------------S-------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
-SS--S--S-------S-S-------------------------------------------------------------
---------S----------S------------------S-----S----------------------------------
----------------------------------------------------------------------------S---
------------------S-S------S--------------------------------------------------S-
--------S------------------------------S----------------S-----------------------
--------S-------------------------S---------S------------------------S----------
-----------------S---------------------------------------------S--S-------------
-------------------------------------------------S------------------------------
--------------------S-----------------------------------------------------------
------S--------------------S-----------------------------S--S------------------S
S-------S------------------S----------------------------------------------------
------------S-----------------S-----S-------------------------------------------
----------------------------------------S--------------------------------S-S----
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--------------------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS-----S-----------S----------------------S-------------S------S--------------
-----------S------S----------------S-----------S--------S--S----------------SSS-
-SS-SSS-SSSSS-----SS--------------------S--S------S-----S---------S---------S---
--SS--SSSSSS----S---S------S--SSSS---S-SSSS-----------------S-----S-------------
----S-----------------------------------------------------------S--S------------
--------------------------------------------------S-------S---------------------
-------------------------------------SSSSSSSS-----------------------S-----------
------S----------------S--------S-----------------------------------------------
-------------------------------------------------SS-----------S----------------S
---------------------------------------------------------------------------S----
-------S------------------------S-----S---------S---S------------------S--------
--------S----------------------------------------S------S-------S---------------
------------S---------------------S----------S---------------------S------------
-------------------------------------------S-S-SSS--------------------SS-------S
-S-----SS-----------------S-----------------------------------------------------
--------------------------------------------------------------------------------
---S-----------------------------------------------S--------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_128
--------------------------------------------------------------------------------
----------------------------GGAATCTGAGCCGCTTTCCT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_1301
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------ATCTGGCCGTTTCGATCCAG----------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------
>forward_877
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------ACCAGTCAGCCTGAGAGTCA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>reverse_2591
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ACACCTGGTTTTGCCTGGAA------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------
>forward_2080
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------TGGTCTGCCCAGTGTCTCTA
--------------------------------------------------------------------------------
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>reverse_3467
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------GAGAACAGCCAAGGAGCCAG----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------
