>input_sequence_47296
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ATGGCGACTGCGGGCCTGCTGCGGAGGGAGA
AGGAGCAGTTCGGCTCTTCCCCCTTCACTGGACAGACGACGATCGAAAGCAAGATCCAGGCCCTGGAAGACCACATTGGC
GCCACCAAGGTACGTACATGGTTTGTTAAGTTAACAATGTCAAAACTCGATGGCGCGTGAACGTAATTGGAGCAAAAGTA
ACAACTCGATGGAGTTAACACTCATGTAGTATTTACA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TACAGTTGCAGTTGATTGATTCGTGTGCGTCAGGAATA---TGCT
GCTTATTAACAAATGCCAAAACGCACCGTATATGAATAATGTGCAGGTTAGCAACAGGAGATCGTGCCGGTGGCTCAACG
ACCGGCTGCTGCTGGAGCTGGTCCCCCGTCTTGGCGCCGACGAGATCAAAGGCCTCTTCGCTCCGCCACCATGGGGTAAT
CCA----TCAGTCAGTCAAACAAATAAATTCTGGTCCATAGCCGACCTCACAGCTCAATTCTAATACTATGTATATTCTG
ATCGATCATGTGCATGCGCATGCGCGCTTGTTATGTAGGTGAGGAGCTGCCCCTGTCTGCATTCTGCATGACAAGTTCTG
CTGCTGCATGGGATGTCTTCAGGACCATCGACATGGATGTTCAGGTATGCCGCCATATACTGGAGTAGAATACAGT----
-ATATACCAGGCCCAGATGCATGGATGCAGAGATAAATTATAGTACTAAGATGTGTGTCTTATCTTCATGGGTCATTTAC
AGTTGACAAATTTTAATGGTGTCTAGGCAAACTTGTTGCAATTTCACATGAGACAATCATGCGCGGATCGGAAGAGCAGT
CGTCTGGACGAAGACGAGGAGATTGCGCTGAACGCTTGGCACCGTATCGGTCGCCAGACAAGAGAAGTTATCAAGAGGAA
CTTCCTGCCTGACCTGCTTCGGATGTACGAAGTATGTGTACCGTCTTGTGTCTTCTACTGAACCTATGTTTTCTGTTTTC
TCAACCAAATATATAGTAC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GTACAATGCATTTTCAGCTCTGTGTGTGACCATGCTTAGG
AAGATAGTAGTACAACACATGTAGCTAGTGTCCTTTGAAAACTCTGAAATCTTTCAGCAATGTCACCCAAAGTAACTGCA
GTAGTTACCCAATTGGAGTAAATTAC------------------------------------------------------
-----------------------------------------------AGTAGTTATCCAACTGGAAGCCATGTGCGGATG
TGCGCATGTCTATATGAAAAAACTGGAAGCCATGTGCATATTTCAGTGTCAGTGTTGATTCCATGGTTGTTTAGTAT---
--------------------------------AGTTTTTTTTTGCGGGGAGGTTAACAGTAAAGTGTCTCGGATTCAATT
TGGCAGGAACGAGTGAGGGCCTTCATCCAAGACACGAGGG---------ACTTGCTTGCACTCGATGTCCAGGACCCATT
CCAGAGGCTGCTCCTACACGGCGTGTGCGAGGTAACTAAAAACATCTGACGAAAGCCGTGTAAAATTCAAGACTTCATAA
TTTGGACAG------------------TCGCCACTTCATAATTTGGA--------------------------GTACTAC
------GTAGCGTCGATTGATTTTGAAGGCTAGCCTACTTGTATCAATCATCAATCTAAAATAAGAAGTTAATTTGTGTG
CCTGCAGTTCTACAATGTGGCA----------GGAGCAGCACCGTGA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr4A_1_TraesCS4A01G184800
TGACTCTTTCGGAAGTAAAACCGTAGCTCCCGCGAAAGAAAAAAATAGAAAACACATTTTTTCCCTTTCCGAGAGGCACA
ACCATGCTTCTCCCGAAAGCAAAATCGTGACTCTCGCGAAAGAAAAAAAAATAAAAAACGCGTTTTTTTCGTTTCCGAGA
GGCACGACCGTGACTCTCGCGAAATCACACCCGTGCCTCTCGCGTAAGCAAAACCGTGACTCTCATGAAAGAAAAGAAAA
AGAAAACGCATTTTTTCGCGCAAAATATTTTTTTCCTAAATTTTTTTTGATTGAAAAGCTAAGGAAGACTAGTGAAAAAC
CAAAAAGTAAAAAAAAAACGTTGAAAAAGCCGAAAACGCGTGCAGAAAAATAAAAATAAAATAAAATCCAGAGAGAGTTT
CCAGAGCGCAACACGTGACGAATGACTGAAAGCGCGTCAAGTGACGCTGATCATTGCGAGACTCGCGAAAAAACGCTAGT
TAACTACTCCCTCCGTTCCTAAATACTTGTCTTTCTAGACATTTCAAATGACTACTATATACGGATGTATGTAGACATAT
TTTAGAGTGTAGATTCACTCATTTTGCTCCGTATGTAGTCATTTGTTGAAATGCCTAGAAAGACAAGTATTTAGGAACGG
AGGGAGTAGTTGCTTTGGTATCATCCTTCTCTGGTGAGACAGGCTCGGATTTGTTATGAATTCATAGGCGGGCCCAGTAC
GTATCCGTGCCGT--------TTCCGTGGTCCTCAATCGACCTCTCCTTGTAGGCTTTCGTGCCGGTTCCGTGGCCCTCA
ATCTACCAAACCAAACGTGCGCATATAAGGGACCGGTCGCACCACACTACTC-GCTGCGCCCGCTCTGTCCCGCCGTCTC
CGTCTCCGGCCACCCAAGCCCTTCCTTCTCGCCGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGGGAGGGAGAGGGAGAGGGAGAGAGTTCGTGCCAAGAATCCATGGCGACTGCGGGCCTGCTGCGGAGGGAGA
AGGAGCAGTTCGGCTCTTCCCCCTTCACTGGACAGACGACGATCGAAAGCAAGATCCAGGCCCTGGAAGACCACATTGGC
GCCACCAAGGTACGTACATGGTTTGTTAAGTTAACAATGTCAAAACTCGATGGCGCGTGAACGTAATTGGAGCAAAAGTA
ACAACTCGATGGAGTTAACACTCATGTAGTATTTACA-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------TACAGTTGCAGTTGATTGATTCGTGTGCGTCAGGAATA---TGCT
GCTTATTAACAAATGCCAAAACGCACCGTATATGAATAATGTGCAGGTTAGCAACAGGAGATCGTGCCGGTGGCTCAACG
ACCGGCTGCTGCTGGAGCTGGTCCCCCGTCTTGGCGCCGACGAGATCAAAGGCCTCTTCGCTCCGCCACCATGGGGTAAT
CCA----TCAGTCAGTCAAACAAATAAATTCTGGTCCATAGCCGACCTCACAGCTCAATTCTAATACTATGTATATTCTG
ATCGATCATGTGCATGCGCATGCGCGCTTGTTATGTAGGTGAGGAGCTGCCCCTGTCTGCATTCTGCATGACAAGTTCTG
CTGCTGCATGGGATGTCTTCAGGACCATCGACATGGATGTTCAGGTATGCCGCCATATACTGGAGTAGAATACAGT----
-ATATACCAGGCCCAGATGCATGGATGCAGAGATAAATTATAGTACTAAGATGTGTGTCTTATCTTCATGGGTCATTTAC
AGTTGACAAATTTTAATGGTGTCTAGGCAAACTTGTTGCAATTTCACATGAGACAATCATGCGCGGATCGGAAGAGCAGT
CGTCTGGACGAAGACGAGGAGATTGCGCTGAACGCTTGGCACCGTATCGGTCGCCAGACAAGAGAAGTTATCAAGAGGAA
CTTCCTGCCTGACCTGCTTCGGATGTACGAAGTATGTGTACCGTCTTGTGTCTTCTACTGAACCTATGTTTTCTGTTTTC
TCAACCAAATATATAGTAC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GTACAATGCATTTTCAGCTCTGTGTGTGACCATGCTTAGG
AAGATAGTAGTACAACACATGTAGCTAGTGTCCTTTGAAAACTCTGAAATCTTTCAGCAATGTCACCCAAAGTAACTGCA
GTAGTTACCCAATTGGAGTAAATTAC------------------------------------------------------
-----------------------------------------------AGTAGTTATCCAACTGGAAGCCATGTGCGGATG
TGCGCATGTCTATATGAAAAAACTGGAAGCCATGTGCATATTTCAGTGTCAGTGTTGATTCCATGGTTGTTTAGTAT---
--------------------------------AGTTTTTTTTTGCGGGGAGGTTAACAGTAAAGTGTCTCGGATTCAATT
TGGCAGGAACGAGTGAGGGCCTTCATCCAAGACACGAGGG---------ACTTGCTTGCACTCGATGTCCAGGACCCATT
CCAGAGGCTGCTCCTACACGGCGTGTGCGAGGTAACTAAAAACATCTGACGAAAGCCGTGTAAAATTCAAGACTTCATAA
TTTGGACAG------------------TCGCCACTTCATAATTTGGA--------------------------GTACTAC
------GTAGCGTCGATTGATTTTGAAGGCTAGCCTACTTGTATCAATCATCAATCTAAAATAAGAAGTTAATTTGTGTG
CCTGCAGTTCTACAATGTGGCA----------GGAGCAGCACCGTGAGAGAGTACGGCGAGGACAGGCTGTGGAAGACGA
CGACGATCAGGAAGAAACCAGGCACGGGCGATCCACCCAGTATCACGTTGGTTGACTTCCTGACAAGGAAGAAGAATGGG
TGCCACTGAA-ATTTCATTTTGTGCCACTAGCTAGCACCTTCCTTCCTTTGAGATCAGGCACGGGCGCTCCATCCAGGAA
GAAGTGGTTGTGCTTGATTT------------------------------------------------------------
--------------------------------------------------------------GTACTGGTATGCTAGCTA
GCCATCTAT---------ACTCCTTAATTTGAAGTGCTACTTAATCACTGGAGTAGTAGCTTATTTGATGATTACTACAG
TATATGACAC-TACTAGCTGTACTATGATTGTCGGTCTTTGTCGTTTCATACATGGATGGATCTGGGTTGTAGTACTACG
CACACTAGCTGCTACACGACCGCGCTGCTGGCAACAGTGTTTAC------ATCAGTGATTAAGTAAATGGTCTGCGTATA
CATGGCGTACTGCCAACGTACTACTGTACGTGCTTGCTGTTTTCTGTTTTTGAGGTCAGTGTACGAGTCCCGAATAAAAA
GATCAGTGTACGCGTATGAGGCCCGCGTATCCTCGGAAGGCCCTTTTGAGAGGCTGTA---AGAGGAGAGACTGGACCAG
CTGGGCTCTCGAGTGTAAACG-TAGATGACGGAGGCCGATGTAAAGAAGAAAATTTCTCAAAAAAAATGTAAAAAAGAAA
AGATAGGCCAGAAAGGCCGAGAGTTGGAGTGTTTACAATAAACTACCACTTTAGGCCTTGTTTGGCACAATGGGTTTTCA
AACCCCCAAAAGGGCTGGGGATTATTAGGGATTTGGTGAATCCCTCCCTTGCACCAAATCCCCTGAAATCCCCGCTCTTC
CCCAACCTCTTCCAGCCCGAATCCTCTTTCTCTAAAATTTACTTGTTTGGTCACAACCATGATGGGGAGAGAAGAAACCC
TAGGGAAGGGTACGAGAGGGGAGGGGAGGTGGGGGTGATGGCATACCCTAGAAGCCTTTTGGCGGTTCGG
>chr4B_657
GGTG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TCATCCTTCTCTGGTGAGACAGGCTCGGATTTGTTATGAATTCATATGC-GGCCCAGTAC
GTATCCGTGCCGGTTCCGACGTTCCGTGGTCCTCAATCAACCTCTCCTTGTAGGCTTTCGTGCCGGTTCCGTGGCCCTCA
ATCTACCAAACCAAACGTGCGCATATAGGGGCCCGGTCGCACCACACTACTCCGCTGCGCCCGCTCTGTCCCGCCGTCTC
CGTCTCCGGCCACCGAAGCCCTTCCT--TCGCCTGAAAAAGAGAGAGAGAGAGAGAGAGAGAGCGAC-------------
-------------------------------AGTTCGTACCAAGGATCCATGGCGACTGCGGGCCTGCTGCGGAGGGAGA
GGGAGCAGTTCGGCTCTTCCCCCTTCACTGGACAGACGACGATCGAAAGCAAGATCCAGGCCCTGGAAGACGACATTGGC
GCCACCAAGGTACATACATGGCTTGTTAA-----CAATGACAAAACTCGATGGTGCGTGGACGTAATTGGAGTAAAATTG
CCAATTCGATGGAGTTATTACTCATGTAGTATTACATACTCCCTCCATTCCACAATGTAGTGCTTCCTCTATCCCCGTGC
TTCAACTTTGACCGCCAATTTAACTACCAAGACCGATTGCGACGGGAGCAAAAATTATATCAGTGAATTCGTATTCAAAA
GAAGTTTTCAATTATATATTTTTTTCTCCCGCCGCAGTTGGTCTCGTTGGTTAAACTTATGGTCAAAGTTGGACCTCGAA
AAGCGTGGGCGCACTATATTTTGGAATGGAGGGAGTACAGTTGCAGTTGATTAATTCGTGTGCATCAGGAATCTGCTGCT
GCTTATTAACAAATGCCAAAACGCACCGTATACAAT--ATGTGCAGGTTAGCAACAGGAGATCGTGCCGGTGGCTCAACG
ACCGCCTGCTGCTGGAGCTGGTCCCCCGTCTTGGCGCTGACGAGATCAAAGGCCTCTTCGCTCCGCCACCATGGGGTAAT
CAATCAGTCAGTCAGTCAAACATACAAATTCTGGTCCATAGCCGACCTCACAGCTCAATTGTACTACTATGTATATTCTG
ATCGAGATCGATCATGTGCATGCGCGCATGTTATGTAGGTGAGGAGCTGCCCCTGTCTGCATTCTGCATGACAAGTTCTG
CTGCTGCATGGGATGTCTTCAGGACCATCGACATGGATGTTCAGGTACGCCACCATATAC-----TAGAATACAGT----
-ATATACCAGGCCTAAATGCATGGATGCAGAGATAAATTATA---CCAAGATGTGTGTCTTATCTTCATGTGTCATTTAC
AGTTGACAAATTTTAATGGTGTATAGGCAAACTTGTTGCAATTTCACATGAGACAATCATGCGCGGATCGGAAGAACAGT
CGTTTGGACGAAGACGAGGAGATTGCGCTGAACGCTTGGCACCGTATTGATCGCCACACTAGAGAAGTTATCAAGAGGAA
CTTCCTGCCTGACCTGCTTCGGATGTACGAAGTATGTGTACTGTCTTGTGTTTTCTTCTGAACCTACGTTTTCTGAATCA
AATTTATACTCTCTCCGTCCCAAAATAAGTCTCAACTTTGTATTAAATTTTGTCTTAACTTTAGTACTCCCTCCATTTCA
AAATATAGTGTGCCCACATTTCCCGAGGTTCAACTTTGACCATAAATTTGAACAACGAGACCGACTGCTGCAGGAGCAAA
AATTATACAATTGAAAAGTTCTTTTGAATATGAATTCATTGGTATGAATTTTGCTACCGCCGCAGTTGGACACGTTGGTT
AAATTTATGGTCAAAGTTGAAGTGCGGAAACCAAGGACGCACTATATTTTGAAACGGAGGGAGTACAGTTTTATACTAAG
TTTAGTATAAAATTGAGACACTTATTTTGAGACGGAGGAAGTACAATGTATTTTCAGCTCTGTGCGTGAATATAT-----
-------------AACACATGTAGCTAGTGTTCTTTGAAAACTATGAAATCTTTGGGCAATATTAT-CAAAGTAATTGCA
GCAGTTACCCAACTGGAATAACC-AC------------------------------------------------------
-----------------------------------------------AGTAGTTACCCAACTGGACAGC-----------
----CATGTCTATATGAAAAAACTGGAAGCCATGTGCATATTTCTATGTCAGTGTTGATTCCCTGGTTGTTTAGTAC---
--------------------------------AG------------------CTAGCATTAAAGTGTCCCCAATTCAATT
TTATAGGAACGAGTGAGGGCCTTCATCCAAGACACGAGGG---------ACTTGCTTGCGCTGGATGTCCAGGACCCGTT
CCAGAGGCTGCTCCTACACGGCGTGTGCGAGGTAACTAAAAACAACTGACGAAAGCCCTGTAGAAGTAAGAAGATGACCT
GTC----------------------GATCGCCACTTCTTAATTTGCATA---CGCAGCTTCCTGGGCTATAGCTAATTAC
CTATAGGTAGCGTCGATCAATTTTGAAGGCTAGACTACTTGTATTGTATCGATCACTCAGCACTC-ACTTGATTTGTATG
CTTGCAGTTCTACAATGTGGCATCTGAGACGACGAGCAGCACAGTGAGAGAGTACGGCGGGGACAGGCTGTGGAAGACGA
CGACGATCAGGAAGAGATCGGGCACGGGCGCTCCACCCAGGATCACCTTGGTTGACTTCCTGACAAGGAAGAAGAATGGA
TGCCACTGAA-ATTTCATTTTGTGATCAG-----GCACCTTCTTTCCTTT-AGATCAGGCACGGGCGCTCCATCCAGGAA
GAAGTGGTTGTGCTTGATTTGTAGTACTACTCCCTCCGTCCGAAAAAGCTTGTCCCTTAAATGGATGTATCTAGCATCAA
GTTAGTGCTAGATACATTCATTTGAGAGACAAGTTTGGGACAAGTTTTATCGGACGGAGGGAGTACTAGTATGCCAGCTA
GCAATCTAT---------ACTCCTTAATTTGAAGTGCTACTCAATCAGTGGAGTAGTAGCGTACTATTTGATGGTTAA--
TATATGACACTTACTAGCTGTACTATGATTGTCGGTCTTTGTCGTTTCATACATGGATCGATCTCGGTTGTAG-------
-----TAGCTGCTACACGACCGCACTGCTGGCAATAGTCTTTACTCCTACATCAGTGATTACCTAAATGGTCTGCGTTCA
CATGGCGTACTGCCTCTGCTGC------------TGCTGTTTTCTGTTTTCGAGG-------------------------
--TCAGTGTACGCGTATGAGGCCCGCGATATCCTCCGAGGCCCTTTTGAGAGGCTGGAAACAGAGGATAGACTGGACCAA
CTGGGCTCTCGAGTGTAAACGATAGATGACGAAGGCCGA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>chr4D_671
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------CTGGTGAGACAGGCTCGGATTTGTTATGAATTCATAGGCG-GCCCAGTAC
GTATCCGCGCCGT--------TTCCGTGGTCCTCAATCAACGTCTCCTTGTAGGCTTTCGTGCCGGTTCCGTGGCCCTCA
ATCTACCAAACCAAACGTGCGCATATAAGGGCCCGGTCGCACCACACTACTG-GCTGCGCCCGCTCTGTCCCGCCGTCTC
CGTCTCCGGCCACCGAAGCCCTTCCTTCTCGCCGGAAAAA-------AGAGCGCGAGAGAGAGCGAC-------------
-------------------------------AGTTCGTGCCAAGGATCCATGGTGACTGCGGGCCTGCTGCGGAGGGAGA
GGGAGCAGTTCGGCTCTTCCCCCTTCACTGGACAGACGATGATCGAAAGCAAGATCCAGGCCCTGGAAGACGACATTGGC
GCCACCAAGGTACACATGGCTT-------GTTAACAATGTCAAAACTCGATGGCGCGTGAACGTAATTGGAGCAAAATTG
CCAATTCGATGGAGTTATTACTCATGTGGTATTACATAC-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------AGTTGCAGTTGATTAATTCGTGTGTATCAGGAATCTGCTGCT
A---ATTAACAAATGCCAAAACGCACCGTATATAAC--ATGTGCAGGTTAGCAACAGGAGATCGTGCCGGTGGCTCAACG
ACCGCCTGCTGCTGGAGCTGGTCCCCCGTCTTGGCGCCGACGAGATCAAAGGCCTCTTCGCTCCGCCACCGTGGGGTAAT
CGATCAGTCAGTCAAACAAATAT--AAATTCTGGTCCATAGCGGACCTCACAGCTCAGTTGTAGTACTATGTATGTTCTA
ATCGATCATGCGCATC--------CGCATGTTATGTAGGTGAGGAGCTGCCCCTGTCTGCATTCTGCATGACAAGTTCTG
CTGCTGCATGGGATGTCTTTAGGACCATCGACATGGATGTTCAGGTATGCCACCGTATAC-----TAGTAGAATACAGTA
CATACACCAGGCCCAAATGCATGCGTGTAGAGATAAATTATA---CTAAGAGGTGTGTCTTATCTTCATGGGTCATTTAC
AGTTGACAAATTTTAATGGTGT-TAGGCAAACTTGTTGCAATTTCACATGAGACAATCATGCGCGGATCGGAAGAACAGT
CGTTTGGACGAAGACGAGGAGATTGCGCTGAACGCTTGGCACCGTATTGATCGCCAGACAAGAGAAGTTATCAAGAGGAA
CTTCCTGCCTGACCTGCTTCGGATGTACGAAGTATGTGTACCGTCTTGTGTCT---------CCTATGTTTTCTGTTTTC
CCAACCAAATATATAGTAC-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------GTACAGTGCATTTTCAGCTCTGTGTGCGAACATGCTTAGG
AAGA---TAGTACAACACATGTAGCTAGTGTCCTTTGAAAACTCTGAAATCTTTCAGCAATGTTACCCAAAGTAACTGCA
TTAGTTACCCAATTGGAGTAAATTATACTCCCTCCGTCCCAAAATAAGTGACTCAATTTTATACTAACTTTGTAACCTTA
CAAAGTTAATATAAAGTTGAGTCACTTATTTTGGGGACGGAGGGAGTAGTAGTTATCC----------------------
--------------------AACTGGAAGCCATGTGCATATTTCTGTGTCAGTGTTGATTCCATGGTTGTTTAGTGTAGG
GTTTTTTTTTCAGGGAGGTTGTTTAGTATACTAG------------------TTAACATTAAAGTGTCTCGGATTCAATT
TTGCAGGAACGAGTGAGGGCCTTCATCCAAGACACGAGGGGCGACAAGGACTTGCTTGCGCTGGATGTCCAGGACCCGTT
CCAGAGGCTGCTCCTACACGGCGTGTGCGAGGTAACTAAAAACATCTGACGAAAGCCGTGTAAAATTTAAGACTTGACCT
GTCCATCATGAAGGATACTTTGCTTGATCGCCACTTCATAATGTGCATAGTACGCAGCCTCCTGCGCGGCAGTGTACTAC
------GTAGCGTCGAACGATTTTGAAGGTTAGCCTACCTGTATCAATCAATCA---AAAATAAGAACTTCATTCGTATG
CCTGCAGTTCTACAATGTGGCATCTGAGACGAGGAGCAGCACCGTGAGAGAGTACGGCGGGGACAGGCTGTGGAAGACGA
CGACGATCAGGAAGAGATCGGGCACGGGCGCTCCACCCAGGATCACCTTGGTTGACTTGCTGACAAGGAAGAAGAATGGG
TGCCACTGAATATTTCACTTTGTGCCACTAG-TAGCACCTTCCCTCA--T-AGATCAGGCACGGGCGCTCCATCCAGGAA
--AGTGTTTGTGCTTGATTT------------------------------------------------------------
--------------------------------------------------------------GTACTAGTATGCCAGCTA
GCAATCTACACTACTAGCACTCCTTAATTTGCAGTGCTACTTAATCACTGGAGTAGTAAGCT--TATTTGGTGATAAA--
TATATGACAC-TACTAGCTGTACTATGATTGTCGGTCTTTGTCGTTTCATACATGGATCGATCTCGGCTGCAGTACTACG
CACACTA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>SNPs
S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS------------------------------------------------------------
--------------------------------------S-----------------------------------------
-------------------------------S------------------------------------------------
--------------S---------------------S-S------------------------S--SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------S-----------------------------------
S----------------------------------------------------------------------S--------
-------------S---------------------------------------------------------------S-S
S---S------------SS--------------SSSS-------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S----------S--------S-------
---------------------------------S-SSS------------------------------------------
----S---------------------------------------------------------------------------
-S--------------------S-S-----------------------------------S--S----------------
----------S-----S----------S----------------------------------------------------
---------------------------------------------------S--------SSSSS---------------
---------------S--------------------------SSS-----------------------------------
----------------------S----------------------------------------------------S----
---S-------------------------------------------S-S------------------------------
--------------------------------------------------------S-----------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------S----------
----SSS--------------------------------------------------------S----------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------SSS-SSSSSSSSSSS
SSSS----------------------------------------S-----------------------------------
----------------------------------SSSSSSSSSSSSSSSSSS------S---------------------
-S---------------------------------------------------------S--S--------------S--
-------------------------------------------------------------------S-------S-SSS
S-SSSS--S------------------------------------S----------------------------------
-----------------S--------------------------------SSS-S------------S--S------S--
-----------------------------------------------------------S--------------------
---------------S-S-S----------S---------S-----S---------------------------------
-------------------------------S------------------S-----------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------S-----
--S---------------------------------------------------------S--S-SSS----S-S--SSS
----------------------------------------------------------S-----S---------------
-----------------------S----------S---S----------------------SS--------------SS-
--------------SSS-SSSSSSSSSSSSSSSS----------------S----SSSSSSSSSSSSSSSSSSSSSSSSS
SS-------------------------SSSS-SSSSS-------------------S----------S-----------S
-------------------------------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_361
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TGAAAAAGCCGAAAACGCGT---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_3103
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CGATGTCCAGGACCCATT
CC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_413
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------AGAGTTT
CCAGAGCGCAACA-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_3118
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ATT
CCAGAGGCTGCTCCTAC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_653
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------GGAACGG
AGGGAGTAGTTGC-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_3201
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TTTGGACAGTCGCCACTTCA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>forward_952
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------GAGAGAGAGAGGGAGGGAGG--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
>reverse_3471
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------ATCCACCCAGTATCACGTTGG-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
