>input_sequence_47295
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---------------------------------------------------ATGGGCCGCAACATGGCGCTTCCCCTGCT
CCTGGCGCTGGCGGCCCTAGTGGCGTCGCTGCCGTCGGGTTCCGTCGCGACGGCGGGGACGGCTGGTGCGTTCGACAGCT
GGTTGTCGGCGAACCAGAAAGACTTCGCGATCAACCAGGCGTTGTACGCGAAGAAGGCGGTGGGTGACACCGGCAGCACC
ATCGACGAGTCCCTGTCCAAGGCGGAGGATAACAAGACCACCTACGTGGTGGACCCCAAGGGCGGTGGTGACTACAAGAC
CATCACGGCCGCGATCGACGCCATCCCGGAGGGCAACACCGGTCGCGTAATCCTGGACCTGAAACCCGGCGAGTACCGTG
AGAAGATCTTCCTCAACCTCAGCAAGCCCTACGTGACTTTCAAGTCCGATCCCAAGAACCCGGCCATCATCGCCTGGAGC
GACACCGCTGCGACGCTAGGGAAAGACGGGAAGCCGGTGGGCACGGTGGGGAGCACCACCTGCGCCATCGAGTCCGACTA
CTTCGTGGCGTACGGCGTCGTGTTCAAGAACGACGCGCCACTGGCCAAGCCGGGGGCCAAGGGCGGGCAGGCGGTGGCGC
TGCGTACGTTCGGCACCAAGCAGGCCTTCTACAACTGCACCATCGACGGCGGGCAGGACACGCTGTACGACCACAAGGGG
CTGCACTACTTCAAGGACTGCGTGATCAAAGGGAGCGTGGACTTCATCTTCGGGTTTGGGAGGTCCTTGTACGAGAACTG
CCGCATCGTGTCCATCGTGAAGGAGATCGCCGTTCTCACGGCGCAGCAGCGGACCAAGACCATCGAGGGCGCTATCGAGA
GCGGGTTCTCATTCAAGAACTGCAGCATCATGAGCGAAGGCGGGGGGGATATCTAT------------------------
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----------------CTTGGCAGGGCGTGGGGGGACTCGTCGCGTGTCATCTACGCCTACACCGAGATGAGCAAGGAGG
TGGTGCCAGTTGGATGGGACGGATGGAACATCAAGCAGCCTGAGAGGTAAGGTCACATCTAA-CA-TGCATGCATGGGAC
TCCTTTTTTA-CATTATGGATGGATGGAGGATCAAGCAAGTTCATTGTGGACATTCTCGCTCATGCATGTTCTTTAT---
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-------------------------------------------------------------------------TAAGGGA
TC---------CCATCACTCATG----TTTATCGAATGCATGCGTACGTGCGTGCAGTAGCGGGATCTACTACGGCGAGT
TCAAATGCAGCGGGCCGGGGTCGGACGCGAGGAAGAGGGTCGGGTGGGCTGTGGATCTCACCGAGGCCCAGGCCAAGCCC
TTCATCGGCACACACTACATCTTCGGCGACTCTTGGATTCTGCCACCGCCAACTGGGAACTCTCCTCCCTCTAAAAAAGG
CTCCAGTGGAGGAGCCCCCGCCA-------------CATCTCCCGCCTCATCGCCCGAGTCGGCAGATTCAGCCTCATCG
CCCGAGTCGGCGGATTCAGCCGCGTCGCCCAAGTCGGCGTCCTCAGCCTCGTCGCCCAAATCCGCCTACTCAGCTGCATC
CAAGGTATGTACATGCATGTTCGAGCTACCCCGCGGCA---TACT-----TTCTTGTAGCGTTAAAAGTCCGCCCTGACA
ACGTTGCGGATTATTTAATTTGCAGACGAAGAAGAAAGAATTATAG----------------------------------
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--------------------------------------------
>chr4A_1_TraesCS4A01G172100
AGTGTCAAAAAAAGAAAAAAAATTATGAGGCCAAAAAAGGAAGCAAATTCTAAGAAAGGGCCAAATAAGAAATTCTCTCT
AGCTTTATTGGTTGGAGATTCCCATGCATGCATGGTTTAGACATTGATTATTTTTGTGGGCCCAACATGCAACTTTTGAC
AGAGATGACATACTCCACCCATCCAACCATGTTT----TTTATTTTAGTTTTCAAATTTGAATATACTGTATCTTTCCAA
TCAAAAGTCCAAATTAAATTTTGTTTGCATATTCTTGTTCGTTGCGACGAGAACATTCAAACTAGATCACTCTTGAATGC
ATT---------AATTTTATTAATTAGTATCA------------------------------------------------
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----------------------------------AATA------------------------------------------
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---------------TTAAAACTTAATAGTCATAATATTAAGTTCTTTACCATGTTTCGTTTGTTT--------------
-TAGGGTTTAGAGTTTACTATTTTAGGGTTGAGGACTTAGAGCTTATGATTGGGGGTTAGGGTTTTTATGTTTAGTATTT
AT---AACTTGATGATTTTATCCTTCCTCATATCAAGTTCTAACAGATGAAACTT-------------------------
----AGTGAAGAATTCTAAAACATGTCAAAACGAATTCACTAGTGCTCTTA-----------------------------
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-----------------------TTTGAAAGCCCTCGTCTCAAGGAGCACAAATATGCAAATGAAACATAAATTATACTT
TTAGTTCAAGGGATGCAGTAGATTCAAATTTAAAAGGTAAAATAAAAGGCGTGGATGGGTGAAGCAGGTCATCTCTATCA
AAAGCTTCATGCGGTGACCCCATCCAAAATAATCAATGGACTAATGCATGCACCAGAGAGAATCCATTCTCCTAAGAATA
GGTACATCTTACCCTACATGTGCGGACGGAGACGAGACATCGCGCGCTGTTAGACCTCCACCTCCACTAGCTTCCACTCC
AAAAATGGCGACCAGCCAGGGCCAGGCGGCCATACATTTGCCAAGACGCACTACATATACGCCAACACCATTCCGCCAGA
ACCTAGGAGAGGGAGACGACGATCGACGGGCTACCAGTGAGTTAGTTACCCATGGGCCGCAACATGGCGCTTCCCCTGCT
CCTGGCGCTGGCGGCCCTAGTGGCGTCGCTGCCGTCGGGTTCCGTCGCGACGGCGGGGACGGCTGGTGCGTTCGACAGCT
GGTTGTCGGCGAACCAGAAAGACTTCGCGATCAACCAGGCGTTGTACGCGAAGAAGGCGGTGGGTGACACCGGCAGCACC
ATCGACGAGTCCCTGTCCAAGGCGGAGGATAACAAGACCACCTACGTGGTGGACCCCAAGGGCGGTGGTGACTACAAGAC
CATCACGGCCGCGATCGACGCCATCCCGGAGGGCAACACCGGTCGCGTAATCCTGGACCTGAAACCCGGCGAGTACCGTG
AGAAGATCTTCCTCAACCTCAGCAAGCCCTACGTGACTTTCAAGTCCGATCCCAAGAACCCGGCCATCATCGCCTGGAGC
GACACCGCTGCGACGCTAGGGAAAGACGGGAAGCCGGTGGGCACGGTGGGGAGCACCACCTGCGCCATCGAGTCCGACTA
CTTCGTGGCGTACGGCGTCGTGTTCAAGAACGACGCGCCACTGGCCAAGCCGGGGGCCAAGGGCGGGCAGGCGGTGGCGC
TGCGTACGTTCGGCACCAAGCAGGCCTTCTACAACTGCACCATCGACGGCGGGCAGGACACGCTGTACGACCACAAGGGG
CTGCACTACTTCAAGGACTGCGTGATCAAAGGGAGCGTGGACTTCATCTTCGGGTTTGGGAGGTCCTTGTACGAGAACTG
CCGCATCGTGTCCATCGTGAAGGAGATCGCCGTTCTCACGGCGCAGCAGCGGACCAAGACCATCGAGGGCGCTATCGAGA
GCGGGTTCTCATTCAAGAACTGCAGCATCATGAGCGAAGGCGGGGGGGATATCTAT------------------------
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----------------CTTGGCAGGGCGTGGGGGGACTCGTCGCGTGTCATCTACGCCTACACCGAGATGAGCAAGGAGG
TGGTGCCAGTTGGATGGGACGGATGGAACATCAAGCAGCCTGAGAGGTAAGGTCACATCTAA-CA-TGCATGCATGGGAC
TCCTTTTTTA-CATTATGGATGGATGGAGGATCAAGCAAGTTCATTGTGGACATTCTCGCTCATGCATGTTCTTTAT---
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-------------------------------------------------------------------------TAAGGGA
TC---------CCATCACTCATG----TTTATCGAATGCATGCGTACGTGCGTGCAGTAGCGGGATCTACTACGGCGAGT
TCAAATGCAGCGGGCCGGGGTCGGACGCGAGGAAGAGGGTCGGGTGGGCTGTGGATCTCACCGAGGCCCAGGCCAAGCCC
TTCATCGGCACACACTACATCTTCGGCGACTCTTGGATTCTGCCACCGCCAACTGGGAACTCTCCTCCCTCTAAAAAAGG
CTCCAGTGGAGGAGCCCCCGCCA-------------CATCTCCCGCCTCATCGCCCGAGTCGGCAGATTCAGCCTCATCG
CCCGAGTCGGCGGATTCAGCCGCGTCGCCCAAGTCGGCGTCCTCAGCCTCGTCGCCCAAATCCGCCTACTCAGCTGCATC
CAAGGTATGTACATGCATGTTCGAGCTACCCCGCGGCA---TACT-----TTCTTGTAGCGTTAAAAGTCCGCCCTGACA
ACGTTGCGGATTATTTAATTTGCAGACGAAGAAGAAAGAATTATAGAGGAAGAAGATCTGACTCTTCTTCGTGTGTTAGA
GACAACGCTTCACCATCTTGCTCTGCAAGAGGCTAATTGGCTTCGATCCATCGGGCTTTAGGACCAGACAGCATGCATCC
CTAGATGAGCTTATTTTCATAGTTTCTTCAGGGTCGAAATGAAACACGTACTGCTCAAGATTGAGAGATAGAGACTTCAT
ATTTTAGATATTTCCGTATTCTCTTCTTTTTA----TACCTTCAAATTGTATG-----TACTGAAGGCAACCAGTGCACC
TGATTCAACTGTTTTTAGTTTGGCGACTGTGATTCTGCCATATAGAGATATAGTACTAGTACATCGCACGTGCCATGCAC
GTGTAGGTTTAAGGATTATTATTCTGATGAAAAATGTTGTGCCTTCAGAGTGATTGAAGGCATTTTTGTTTAGTACATAA
TCATATTATTAATATATTTAACAAATAGCAAGATCAGGTAAATTCCATACGCATGTATC--ATACACTGATTAGAACGAT
CAATTAGAAGTGTATGCAAAGTATTGGTGAAACAAAGGAAAACTTGAGTCATGATATTTTATTTTTGAATAATACAATGA
TTGACGAAGTCATCACAGGTGACTTGCTAACACGGAAACGCCACCTCCACTGAAAGAATATTCCGTCTTAATGAGACAAA
CATATGTCAAACCCGAAGTTTGATC-------------GAGTATAACCA------------TCCAACTCGGTTCATAATT
TTGTGAAACTTGTTTATAAGATAAAGTAATAATGTTGTTTAGTTACAACACATATTAAGTTCTC-TTTTTTCTATCTAAA
GCACTTGAATGTGAACTGTCGGAGGGTGCGTTGTTGTATGCAGTTTTTTCTCTCTCTCTCTCTCACCACGTTGCCTAGTA
CGTACATTAGTAGTACTTTTTTCCAGATGAATGGTGCTACACTGCTACTGGTGGGCATCACTCTCTCACGGGCACCGTGC
CAGAGATTTC-TTTCTAGTAGCAGTAGCAAGAGGAAGAATCACG
>chrUn_91
--------------------------------------------------------------------------------
----------GTTGGAGATTTTCATGCATGCATGAT---GACATTGATTATTTTTGTGGGCCCGACATGCAACTTTTGGC
AGAGATGACATGCTCCACCCATCCAACCTCTCATTCTTTTTCAAATTTTTTTCAAATTTGAATCTACTGTATCTTTTGAC
-CGAAAGTCCAAATTAAATTTCATTTGCATATTCGTGTTCCTTGCGACGAGAACATTCAAACTAGATCACTCTTGAATAC
ATT---------AATTTTACTACAAATATTAAAACTTAATAGTCATAATATTAAGTTTTTACCAAGTTTCGTTTGTTTAA
GGTTTAGAGTTTACTATTTTAGGGTTAAGGGCTTAGGGCTTATGATTGGGGGTTAGGGCTTTTAGTTTTAGTATTTAAAA
CTTGATGATTTTATCCTTTGTCGTATCAAGTTCTAATAGATGACCCTTGCAAAAAAAAGTTATAATAGATGAAAGTTAGT
GAAGAAATTTTAAACTTGTCAAAACGGATTCACGATTGCTCTTATTTGTCAAGGAGCACAAATCCGCAAACGAAACATAA
ATTATACTTTTAGTTCAAGGGATGCAATAGGTTCAAATTTAAAAGGTAAAATAAAAGGCGTGGATGGGTGAAGCATGTCA
TCTCTATCAAAAGCTTCATGCGGTGACCCCATCCAAAATAATCAATGGACTAATGCATGCACCAGAGAGAATCCATTCTC
CTAAGAATAGGTACATCTTACCCTACCTGTGCGGACGGAGACGAGACATCGCGCGCTGTTAGAGCTCCACCTCCACTAGC
TTCCACTCCAAAAATGGCGACCAGCCAGGGCCAGGCGGCCATACATTTCCCAAGACGCACNNNNNNNNNNTCCAAACGGC
GATTAGGTGGCGATTATCTTACATGGCACTTTTACGGAAAGGGCCATCTTACCCTAGATGGAAGGGGTGTTTTGGAGAAT
ATACGAGACCCCGTAACGTTTACGACAACTGCTGGAGAGTTTTTTTTTTTTTTGCCCAACTTCCTCTAAACCTTGGTTAT
TTTATGGATATGGAAAGTGTTGAAGATGCTCTGAGAACGGGAAAAAAATCTCCCATGCATAGGAGGTCCCATGCGTGCCT
CATTTGTCCATTTGGTTGGAGATGAGCTTTGCTACACCCACGTAAAATCCTTACCCTTTTTTTACAAACCTGTTGACTTG
ACCTTATTTGATTTGAAGGGAAAAAAAGCCCAGGCCGACCCGTTGAATTCAGGGGGGTTGATTAATTAGTTGAGGAAAAG
AAACTACATAGCTTTATTAGGTATAGTAAGGTTACCTAATTTTCCTCTTTTGTAAAAGTAGCACCTAAGAGCATCTCCGT
AAAAATGGATTTACGGGTGTCCATATAATTTAGAGGAAGTTTTAGGTGATGTATTTTCTTAGTTTCATGTAAGACCTTCC
CATAAAAGTGGTTTTTGATGATGGGGCGACGACGAAGGCAAACTCTAGTGACAACTGACAGCGGACGACGGTGGTCGACG
GAGGCGGGCGACGACGCGGCGCCGATGGTCCTTGATGCCAGCATGGCTCCAAACGGCAATTAGGTGGCGGTTATCTTACA
TGGCACTTTTACGGAAAGGGCCATCTTACCCTAGATGGAAGGGGTGTTTAATTTGGAGAATATACGAGAATTTACGACAA
CTGCTGGATTTTTTTTTTTTGCCCAACTTCCTCTAAACCTTGGTTATTTTATGGATATGGAAAGTGTTGAAGATGCTTTA
AGAACGAAAAAAAAAGATCTCCCGTGCATAGGAGGTCCCATGCGTGCCTCATTTGTCCATTTGGTTCGAGATGAGCTTTG
CTACACCCACGTAAAATCCTTACGGTTTTTTTTTACAAACCTGCTGACTTGACCTTATTTGACTTGAAGGGAAAAAAAGC
CCAGGCCGACCCGTTGAATTCAGGGGGGTTGATTAATTAGTTGAGGAAAAGAAACTACATAGCTTTATTAGGTATAGTAA
GGTTACCTATGTTGGAGATTTTCATGCATGCATGATGACATTGATTATTTTTGTGGGCCCGACATGCAACTTTTGGCAGA
GATGACATGCTCCACCCATCCAACCTCTCATTCTTTTTCAAATTTTTTTCAAATTTGAATCTACTGTATCTTTTGACCGA
AAGTCCAAATTAAATTTCATTTGCATATTCGTGTTCCTTGCGACGAGAACATTCAAACTAGATCACTCTTGAATACATTA
ATTTTACTACAAATATTAAAACTTAATAGTCATAATATTAAGTT-TTTACCAAGTTTCGTTTGTTTAA------------
----GGTTTAGAGTTTACTATTTTAGGGTTAAGGGCTTAGGGCTTATGATTGGGGGTTAGGGCTTTTAGTTTTAGTAT--
-TTAAAACTTGATGATTTTATCCTTTGTCGTATCAAGTTCTAATAGATGACCCTTGCAAAAAAAAGTTATAATAGATGAA
AGTTAGTGAAGAAATTTTAAACTTGTCAAAACGGATTCACGATTGCTCTTA-----------------------------
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-----------------------TTTG------------TCAAGGAGCACAAATCCGCAAACGAAACATAAATTATACTT
TTAGTTCAAGGGATGCAATAGGTTCAAATTTAAAAGGTAAAATAAAAGGCGTGGATGGGTGAAGCATGTCATCTCTATCA
AAAGCTTCATGCGGTGACCCCATCCAAAATAATCAATGGACTAATGCATGCACCAGAGAGAATCCATTCTCCTAAGAATA
GGTACATCTTACCCTACCTGTGCGGACGGAGACGAGACATCGCGCGCTGTTAGAGCTCCACCTCCACTAGCTTCCACTCC
AAAAATGGCGACCAGCCAGGGCCAGGCGGCCATACATTTCCCAAGACGCACTACATATACGCTAACACCAGTCCGCCAGA
AGCTAGGAGAGGGAGACGACGATCGACGGGCTACCAGTGAGTTAGTTACCCATGGGCCGCCACATGGCGCTTCCCCAGCT
CCTGGCGCTCGCGGCCCTAGTGGCGTCGCTGCCGTCGGCTTCCCCCGCGGCGGCGGGGACGGCTGGTGCATTCGACAACT
GGCTGTCGGCGAACCAGAAAGATTTCGCGATCAACCAGGCGTTGTACGCGAAGAAGGCGGTGGGTGACACGGGCAGCACC
ATCGACGAGTCCCTGTCCAAGGCGGAGGATAACAAGACCACCTACGTGGTGGACCCCAAGGGCGGTGGTGACTACAAGAC
CATCACGGCCGCGATCGACGCCATCCCGGAGGGCAACACCGGTCGCGTAATCCTGGACCTGAAACCCGGCGAGTACCGTG
AGAAGATCTTCCTCAACCTCAGCAAGCCCTACGTCACTTTCAAGTCCGATCCCAAGAACCCGGCCATCATCGCCTGGAGC
GACACCGCTGCGACGCTAGGGAAAGATGGGAAGCCCGTGGGCACGGTGGGGAGCACCACCTGCGCCATCGAGTCCGACTA
CTTCGTGGCGTACGGCGTGGTGTTCAAGAACGACGCGCCACTGGCCAAGCCGGGGGTCAAGGGCGGGCAGGCGGTGGCGC
TGCGTACGTTCGGCACCAAGCAGGCCTTCTACAACTGCACCATCGACGGCGGGCAGGACACGCTGTACGACCATAAGGGG
CTGCACTACTTCAAGGACTGCGTGATCAAAGGGAGCGTGGACTTCATCTTCGGGTTTGGGAGGTCCCTGTACGAGAACTG
CCGCATCGTGTCCATCGTGAAGGAGATCGCCGTGCTCACGGCGCAGCAGCGGACCAAGACCATCGAGGGCGCTATCGAGA
GCGGGTTCTCGTTCAAGAACTGCACCATCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNCTTGGCAGGGCGTGGGGGGACTCGTCGCGCGTCATCTACGCCTACACCGAGATGAGCAAGGAGG
TGGTGCCAGTTGGATGGGACGGATGGAACATCAAGCAGCCTGAGAGGTAAGGTAACATGCATGCATTGCATGCATGGGAC
TCCTTTACATGCATTATGGATGGAGG----------------------------------------ATGTTCTTTAT---
--------------------------------------------------------------------------------
-------------------------------------------------------------------------TAAGGGA
TCATCTTCATCCCATCACTTATGTCTTTTTATCGGATGCATGCGTACGTGCGTGCAGTAGCGGGATCTACTACGGCGAGT
TCAAATGCAGTGGGCCGGGGTCGGACGCGAGGAAGAGGGTCGGGTGGGCTGTGGATCTCACCGAGGCCCAGGCCAAGCCC
TTCATCGGCACACACTACGTCTTCGGCGACTCTTGGATTCTGCCACCGCCAACTGGGAACTCTCCTCCCTCCAAAAAAGG
CTACAGTGGAGGAGCCCCCCGCCACATCCCCCGCCGCATCCCCCGCCTCATCGCCCGAGTCCGCAGATTCGGCCTCGTCG
CCCGAGTCGGCGGATTCGGCCGAGTCGCCCAAGTCGGCGTCCAAAGCCTCGTCGCCCAAATCCGCCTACTCAGCTGGATC
CAAGGTATGTACATTCATGTTCAAGCTACACCGCGGCATACTACT-----TTCTTGTAGCGTTAAAAGCCCACGCTGACG
GCGTTGCGGATTATTTAATTTGCAGACGAAGAAGAAAGAATTATAGAGGAAGAAGATATCACTCTTCTTCGTGTGTTAGA
GGCAACGCTTCACCATCTTGCTCTGCAAGAGGCTTCG------------ATCGGGCTTTAGGACCAGACAGCATGCATCC
CTAGATGAGCTTATTTTCATAGTTTCTTCAGGGTCGAAATGAAACAC----TGCTCAAGATTGAGAGATAGAGACTTCAT
ATTTTAGATATTTCCGTATTCTCTT-TTTTTA----TACCTTCAAATTGTATT-----TACTGAAGACAGCCAGTGCACC
TGATTCAACTGTTTTTAATTTGGCGACCGCGATTCTGCCATATAGCGATGTACTACTAGTACATCGCACGTGCCATGCAC
GTGTAGGTTTAAGGATTATTATTCTGATGAAAAATGGTGTACCTTCAGAGTGATTGAATGCATTTTTATTTAGTACATAA
TCATATTATTAA--------------------------------------------------------------------
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>chr5D_123
ATTAATTACT----------------------------------------------------------------------
--------------------------------------------------TTTTGATGGGCACCGAATACAACTTTTGGC
AGAGATGGCATGCTCTATCCATCCAACCTCTCATGTTGTTTATTTTAGCTTTCAAATTTGAATATACTATATCTTTTAAA
TCGAAAGTCCAAATTAAGTTTCTTTTTTATATTTGCGTTTGTTGCGACGAGGACATTCGAACAAGGTCACCCGAACATTT
TGACAACTTTTAAATTTTACT-----------------------------------------------------------
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---------------------------AAGTTCTAATA------------------------------------------
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---------------TTAAAACTTAATAGTCATAATATTAAGTT-TTTACCAAGTTTCATTTGTTGTTATGGTTTATGGT
CTAGGGTTTAGAGCTTAGTGATCTAAATGCTCTTATATTTCTTTACAGAG------------------GTAGTACTAT--
-TTAAAACATGGTCATTTAGGCC-TCATCGTGTCAAGTTCTAACAAATGAAACTT-------------------------
----TGTGAA-AATTCTAAAACTTGTCAAAACGTATTCAAGAGTGGTCTTA-----------------------------
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-----------------------TTTGAAAGCCATCATCACACGAAAAACAAATATTCAAATGAAATGTAAATTGGACTT
TCAGTTCAAAAGATACACTAGATTCAAATTGAAAGT-TAAAATAA-----------------------------------
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>chr4D_359
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------------------------------CATAATATTAAGTT-TTTACCAAGTTTCGTTTGTTT--------------
-TAGGGTTTAGAGTTTACTATTTTAGGGTTAATGGCTTAGGGCTTATGATTGGGGGTTAGGGTTTTTAGTTTTAGTATTT
ATTAAAACTTGATGATTTTATCCTTTGTCGTATCAAGTTCTAATAGATGACCCTTGCAAAAAAAAT---TAATAGATGAA
ACTTAGTGAAGAATTTTTTAACTTGTCAAAACGGATTCACGATTGCTCTTAGGCGGCTGCTACGAATCATTCGACAGTCG
AGTCCCCAACCGTCCGATCAAATCCCTCGATACGTTGGATTAGTCAACATAGACCGCGTCGCTCTCACACAATAGAAGAC
CGCACGTGGCCTCGTCTTCCTCGCGTCGCAGCCAATTCAAAAAAATCCCCACGCACACGCGATTCCTGAGATAGACGCGG
TGAGCTCCAGCGAGCGGCCCTGATCTAGCTCGCAGTCGCAGCCGCCATGCCGCGCTCGCTCGCAGCACCAGGCTCGGCCC
AGCTCGTTCCTCGCCTTGCAGCAAAGCCGTTCCTCGCCTTGCAAACACATTACCGCCGCCAGTCGTGCAACACCATAGAC
TCTAGGCATGGCAGCAGCGCTTCACTGCAACGGGCTGCCCCCAAGAGCCGCCGATGACGCTGCACTGAGCCACCCACAAG
CGCAGCGCTGCAGCACCGGGACCCCTCGCGGGAGTGGTGCATCGGAGCAGGGGGGGTAGGCGTCGACGAGCGCTCCATTG
CAGCTCCGTAGCCGGTGACTTGCAGCTTCCTTGCAGCTCCGCCACCTACGCCGAGCTGCTCCATTGCAGCTCCGTCGCCG
GCGTCCAGCGCTCCATTGAAGCTCCGCCGCCTGTGCCGAGCGGCTCCATTGCAACTACGTAGCCCGCGACTTGCAGCTTC
GCCGCTTGCGCCGAGCAGCTCCATTGCAGCTCCGCCGCCGGCGTCGAGCGCTCCATTGGAGCTCCGTCGCCTGCGCCGAG
CAGCTCCATTGCAGCTCTGCCGCCGTCGAGCAGCTCCATTTCAGCTCCGCCGCCGTCGCTCGAGTACTGCAACGGCACAC
GAGGTTGCATTGCATCACGGATGAGGTTGTAACGCACCATGATGGCCGTGGACAAGTTGTTGCGTTGCATACCGGCGGCC
ATGGACGCGTTGGTGCGTTGCAGCACCGGCGTTCATCGACGAGCGCCATTCGTATCGGCGGCATCACCTCCCGGTTCCCC
GCTGTTGTGGTGGTCCTCACCATGGCTCCCCTCCATGGGCGCTATGCCACCTCCAGCGATGCAACGGAGGAGCTCCGGCT
GTTGGTGCCGACGGCCGGCGTCTAACTCTTCCGTTTTCCTGTTGTGGTGGTGCTCGGCTGCTCGCCATGGCTAATCTCCT
GGCGATGGGATGTAAGAGGAAGAAAGAAGAAGAAACGAGTGGAGGAGCTGCGTTAGAGATAAGATAAGGTTGGGGCGAAG
CGGTGGGCAGCCGCAGCCTGACACAGACACATGGCGCATAGAGAAGGAGGCTTAAAAGAGAGGAAGATTAGTCGGATGAT
TATAAACGTTTTCCTTGCTCTTATTTCAAAGCCCTCGTCTCAAGGAGCACAAATACACAAACGAAACATAAATTATACTT
TCAGTTCAAGGGATGCAATAGATTCAAATTTAAAAGGT-AAATAAAAGGCGTGGATGGGTGAAGCATGTCATCTCTATCG
AAAGCTTCATGCGGTGACCCCATCCAAAATAATCAATGGACTAATGCATGCACCAGAGAGAATCCATTCTCCTAAGAATA
GGTACATCTTACCCTACCTGTGCGGACGGAGACGAGACATCGCGCGCTGTTAGAGCTCCACCTCCACTAGCTTCCACTCC
AAAAATGGCGACCAGCCAGGGCGAGGCGGCCATACATTTCCCAAGACGCACTACATATACGCCAACACCAGTCCGCCAGA
AGCTAGGAGAGGGAGACGACGATCGACGGGCTACCAGTGAGTTAGTTACCCATGGGCCGCCACATGGCGCTTCCCCTGCT
CCTGGCGCTCGCGGCCCTAGTGGCGTCGCTGCCGTCGGCTTCGCTCGCGACGGCGGGGACGGCTGGTGCGTTCGACAGCT
GGTTGTCCGCGAACCAAAAAGACTTCGCGATCAACCAGGCGTTGTACGCGAAGAAGGCGGTGGGTGACACGGGCAGCACC
ATCGACGAGTCCCTGTCCAAGGCGGAGGATAACAAGACCACCTACGTGGTGGACCCCAAGGGCGGTGGTGACTACAAGAC
CATCACGGCCGCGATCGACGCCATCCCGGAGGGCAACACCGGTCGCGTAATCCTGGACCTGAAACCCGGCGAGTACCGTG
AGAAGATCTTCCTCAATCTCAGCAAGCCCTACGTCACTTTCAAGTCCGATCCCAAGAACCCGGCCATCATCGCCTGGAGC
GACACCGCTGCGACGCTAGGGAAAGACGGGAAGCCCGTGGGCACGGTGGGGAGCACCACTTGCGCCATCGAGTCCGACTA
CTTCGTGGCGTACGGCGTGGTGTTCAAGAACGACGCGCCACTGGCCAAGCCGGGGGCCAAGGGCGGGCAGGCGGTGGCGC
TGCGTACGTTCGGCACCAAGCAGGCCTTCTACAACTGCACCATCGACGGCGGGCAGGACACGCTGTACGACCACAAGGGT
TTGCACTACTTCAAGGACTGCGTGATCAAAGGGAGCGTGGACTTCATCTTCGGGTTTGGGAGGTCCTTGTACGAGAACTG
CCGCATCGTGTCCATCGTGAAGGAGATCGCCGTGCTCACGGCGCAGCAGCGGACCAAGACCATCGAGGGCGCCATCGAGA
GCGGGTTCTCGTTCAAGAACTGCACCATCATGAGCGAAGGCGGGGGGGATATCTAT------------------------
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----------------CTTGGCAGGGCGTGGGGGGACTCGTCGCGCGTCATCTACGCCTACACCGAGATGAGCAAGGAGG
TGGTGCCAGTTGGATGGGACGGATGGAACATCAAGCAGCCTGAGAGGTAAGGTAACATGCATGCA-TGCATGCATGGGAC
TCCTTTACATGCATTATGGATGGAGGATGTTTTATTAAGGCCTTGTACAATGGAAGGTGCTTAGAGGGATGCTTAAAAAA
ATAAACCGGGTTTTTCTGAAGCACCGGCGTCTATTTTTATAGGAGGGACGCTTAGTTAAGCGTCTATCCTGTACAAATAA
GCATCGGTGCTTAAGAAAAGTCTGGTTTATTTCTCTAAGCACCTCCCCTAAGCACCTCCTATTGTACAAGGCATAAGGGA
TCATCTTCGTCCCATCACTCATGTTTTTTTATCGAATGCATGCGTACGTGCGTGCAGTAGCGGGATCTACTACGGCGAGT
TCAAATGCAGCGGGCCGGGGTCGGACGCGAGGAAGAGGGTCGGGTGGGCTGTGGATCTCACCGAGGCCCAGGCCAAGCCC
TTCATCGGCACACACTACATCTTCGGCGACTCTTGGATTCTGCCACCGCCAACTGGGAACTCTCCTCCCTCTAAAAAAGG
CTACAGTGGAGGAGCCCCCGCCA-------------CATCCCCCGCCTCATCGCCCGAGTCCGCAGATTCGGCCTCATCG
CCCGAGTCGGCGGATTCAGCCGCGTCGCCCAAGTCGGCGTCCAAAGCATCGTCGCCCAAATCCGCCTACTCAGCTGGATC
CAAGGTCTGTACATTCATGTTCAAGCTACCCCGCGGCA---TACTTTTCGTTCTTGTAGCGTTAAAAGCCCGCCCTGACG
GCGTTGCGGATTATTTAATTTGCAGACGAAGAAGAAAGAATTATAGAGGAAGAAGATCTCGTCTGCAAGAGGCTAATTAA
TT----------------------------GGCTTCG------------ATCGGGCTTTAGGACCAGACAGCATGCATCC
CTAGATGAGCTTATTTTCATAGTTTCTTCAGGGTCGAAATGAAACAC----TTCTCAAGATTGAGAGATAGAGACTTCAT
ATTTTAGATATTTCCGTATTCTCTT-CTTTTTATACTACCTTCAAATTGTATGTTTCCTACTGAAGGCAACCAGTGCACC
TGATTCAACCGTTTTTAATTTG--------------GCCATATAGAGATAT-GTACTAGTACATCGCACGTGCCATGCAC
GTGTAGGTTTAAGGATTATTATTCTGGTGAAAAATGTTGTACCTTCAGAGTGATTGAACGCATCTTTACTTAGTACATAA
TCATCTTATTAATATATTTAACAAATAACAAGATCAGGTAAATTCCATAGACATGCATCATATACACTGATCAGTCCTAT
CAATTAGAAGTGTACGCAAAGTATTCCTGAAACAAAGGAAAATTTGGGTCATGATATTTTATTCTTGAATAAGATGGTGA
TTGATGAAGTCATCACAGGTGACTTGCTAACACGGGAACACCACCTCCCACTAAAAAATATTCCATCTTAATGAGACGAA
CATATAGCAAACTTGAAGTTTGATCTCGAATGGGCTGTGAGTATAACCATCCTCCCAACCATCCAACTCGGTTCATAATG
TTGTGAAACTTGTTTATAAGAGAAAGTAATAATGTTGTTTAGTTACAACACATATTAAGTTCTTTTTTTTTCTATCCAAG
GCACTTGAATGTGAACTGTCGGAGGGTGCGTTGTTGCATGCAGTTTTTTTCTCTCACACTGCTACTGTTACTGTTGGTAG
TACTTC------------TTTTCCAGATGAATGGTGCTACACTGCTACTGCTGGGCATCACTCTCTCACGGGCACGGGAG
CCTGGCAGAGATTTCTAGTAGCAGTGGCAAGAGAAAAAATAACG
>SNPs
-S-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS----------SS------------S-SSS------------------------S--------------S-
-----------S----------------SSSSS-------------------------------------------SS--
--S------------------SS-----------S-------------------------------------------S-
-------------------S--SSS-SSS-S-------------------------------------------------
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--------------------------------------------S-------S---------------------------
------------------------------S---------S---------------------------SS----------
--------------------------S--S--------------------------------------------------
----------------------S----------S------S---------------------------------------
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-----------------S------------------------------------------------S-------------
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-----------------S------------------------------------S-------------------------
---------------------------------------S------------------------------S---------
-S----------------------------------------------------------S-------------------
---------S----------------------------S----S------------------------------------
----------------------------------------------------------------------S---------
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----------------------------------S---------------------------------------------
-----------------------------------S--------------------------------------------
------------------S-------------------------------------------------------------
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---------------------------------S----------------------------------------------
----------S-------------S-------------------------------------------------------
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---------------------------------------------S----------------------------------
-----------------------------------------------------S----SS-S------------------
------SSSS--------------S-SS-SS-S-SSS-S-SSSSS-SSSSSSSSSSSS---S-SSS--------------
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--S-------------------------------------S--------------------S--------S---------
------------------------------------------SS--------------------------------S---
--------------S-------S---------------------------------------------S----------S
S----------------------------------------------------------S--------------------
-S--------------------------------SSSSSSSSSSSSSSS-------------------------------
-----------------------------------------------SSSS-----------------------------
-------------------------S------------------------------------------------------
-----------------S---------S-S--------------------------------------------------
----------------------------------------S-----------------S--------S------------
---------------------------S---------------------SS----S---------------S--SS-S--
--------------S----------SS---------------S---S----------------S--------S-SSS---
----S------------------------------S---S--------SSSS---S--------S------------S--
-----SS-----SS-----------------------------------------------------------------S
---------------------S-----------------------------------------S------------S--S
------------------------------------S------------SSSSSSSSSSSS--SSSSSSSS--SSSSSSS
SSSSSSSSSSSSSSSSSS--------------------------------S------------------------S-SSS
-SSS-SSSSS---------------S-------S--S---S---
>forward_4322
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--------------------------------------------------------------CAACACCATTCCGCCAGA
AC------------------------------------------------------------------------------
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>reverse_6528
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-----------------------------------------------CCATCGGGCTTTAGGACCAG-------------
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--------------------------------------------
