>input_sequence_47283
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----------------------------------------ATGGGCGCACCTCGTCCACCCGCGCGGCAAGCCAGCAAGA
AGCCTGCGGCTGCTCCACTCTACTCCCCTGGACGCGGCTACAAGCCCGGTACCGCGCCTCCACACGCGGCGTCACTCCGT
CGCGGCGGCGCACCTCACGACGCCGGCGAGCTCCGGGTCCTTCTGAAGCGCTTGGCCGACGCGTCCCCGGCACCCAGCGA
GGCCGCGCCGGCGCTGCACGCCCACGCCGCAAAGCTCGGCCTCGGCAGCCGCCACCGCGGCGTCCGCGACGCCCTCGTCG
CGCTCTACCTCGCGTGCGGCCGGCGCGGCATTGCGCGCGCCTTGCTGTC---CGCCGGTGGCGGCCCAGCGCCCGACGTG
GTTTCTTGGACGGTCCTGGTGACCGGCCACGCGCGGCTGGGGCTGTTCCGCGAGGCCGCGGCGCTGTTCCTTGCCATGGC
GGACGACGGCGCGCTCGTCATCGACGCCGTGGCCGCCGCCGCGGCGTTCGCGGCCTGCGCCGGTGCCGCGGACCTCGCGC
TGGCCAGGGAGGTGCACCGGCGCGTCCTAGAAGCGGGAGTGGCTCTCGACGTCGTCGCGTGCAACGCGCTGGTCGACATG
TACGCCAAGTGCGGCGACGCGGCGGCCGCGCTCCGTTGCTTCCGTGCGATGGTGCCGGCCAAGAACGTGGTGACCTGGAA
CACGATGATCTCCGCGCACGCGCGCGCGGGCGAGGTCCAGGAGGCGCTGGAGCTGTTCCGGGAGATGCTGCAGCAGCAAG
GCTGCGCGCCCTCGCCGCTTCCCGACGACGCCACGTTCGTCGCGGTCCTCGGCGCGTGCGCGCGGCTCGGCGCACTGGAC
GCCGGCAGGTGGGTGCACGCCTACATGGGCAGGACCGGACGGGATGCCGCCGACGGCGTCGTGGGCAACGCGCTGATCGA
CATGTACGCCAAGTGCGGGGCCGTCGAGCAGGCCGCGGACGTGTTCGACGCAATGACGCGGCGAGACGTGTACACCTACA
CGTCCATGATCTGGGGGCTTGCGATGCACGGCCGGGGCGAGGAGGCGCTGGCGCTCTTCGGCGACATGCGACGGGCCGGC
GTGAGGCCGAACGAGGTGACCTTCCTCAGCGTCCTCTCCGCCTGCTGCCACGCCGGAAACATCGAAGACGGTCTCCGGCA
TTTCGACGCCATGGTGGAGCTGCACGGCGTTGCGCCAGGCATCGCGCACTACGGATGCGTCGTCGACATGCTCGGCCGCG
CCGGGAGGCTGGACGAGGCGGAGGATCTCGTCTCCGCGATGCCGATCCGGCCCGACGCGCTCATCTGGGGCTCGCTGCTC
GCGGCCTGCCGGGCGCACGGCCATGTCAACCGCGCCGAGCGCGTGATGCGGCGGATGGCCGAGGACGAGGCCGACGCCGG
GGACTACGTGCTCATGTCGAACATGTACGCACACGAGGGCCGACACGGGAAGGCGGTGCAGGTGAGGCGGCAGATGAGGA
GAGGCAAGGTGGACAAGGTACCCGGCTGCAGCCTCATCGAGATCGACGGCGTGGTGCACGAGTTCCAAGCAGTTCCGGCG
AACTCCCTCGAAATCTCCGATGACGCATCAGACTTTTTTAGCTGA-----------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
>chr1D_1_TraesCS1D01G360800
CCACCGTCGATCCGGTGACCGCAAGGGCAAGCGCCTGGCGTGAAAATGGTGAAGTCTGGCACCCCCTCTGTTTATTTCTA
GTATCTATGTAGTGCCCAGGTCGAGTGATGAACTGCCTCTTTTGGTTCGTTTGTACATGTCTGGTGATGAATTTTTTGTT
CTTATGACTTATGTTCTTAAATTGTATGTCTGTTTCTTTCTATATTGTTGATGATCTACGTAGTTTATCTCGCGGCGCAT
GCATTGCATGGATTTGGGAAGAGGGGGAGGGGAATGAAGATAACGATTGCGAACGCTAAGATCCGTGGACACGTTCGCGG
ACCTATAGAAAGTCAATTTTGTGAAGTCGAGTTGTAAATGCTCTAACGACCAAAACGACTTCCCAGGTCATAAAATGAGT
TTCATTTTTGTTTCTCGAGTTGTAGGGCATTTTTTTACTCAAAGTGGCCAAAATGGCAGAGGAGTGATCGAGCTGTAGGG
CATTTTGAATCTGACCTTTTGCGGCATGATACATATATACCACATCTAGGTGCTAAATCATTTCATTTTTTTAATGGAGC
CTTTTAGCAATCTCAGGTGCACCGGTTATACCCAGTAGATTATCCTTGAGGGCGAACTAACCTGTGGTTGGATGGTTAGA
GGGACAGTAGTATCCTCAGCCCAGCAGGGTTCAAATCCTGGTGCTTGCATTATTTCTAGATTTATTTCAGAATTTTCGAC
GATGCCTTTTCAATGAGAGAAGACGTTCCCGTCGATGAGGCAGCGATAGGATGTGCCTGTACCAGCGTTTGCGTCTTTAC
TGTGTTAAAAAAAAATCATCCTTACGGTGTTGGACTGTTGGCACATCTCCGCGCTGCGGTGCTTCCAAAAATATAGCAGG
CGACGTGGATCCCGTCCAAGTCAGCACGTCGGAATTTTCCAAGCTCTACGTACAGATATCACTACTGACTGGATGTCTGG
ATGACATTTTCTCTTCACGACCGGGGGAGAGGCCATCGCCATGGGCGCACCTCGTCCACCCGCGCGGCAAGCCAGCAAGA
AGCCTGCGGCTGCTCCACTCTACTCCCCTGGACGCGGCTACAAGCCCGGTACCGCGCCTCCACACGCGGCGTCACTCCGT
CGCGGCGGCGCACCTCACGACGCCGGCGAGCTCCGGGTCCTTCTGAAGCGCTTGGCCGACGCGTCCCCGGCACCCAGCGA
GGCCGCGCCGGCGCTGCACGCCCACGCCGCAAAGCTCGGCCTCGGCAGCCGCCACCGCGGCGTCCGCGACGCCCTCGTCG
CGCTCTACCTCGCGTGCGGCCGGCGCGGCATTGCGCGCGCCTTGCTGTC---CGCCGGTGGCGGCCCAGCGCCCGACGTG
GTTTCTTGGACGGTCCTGGTGACCGGCCACGCGCGGCTGGGGCTGTTCCGCGAGGCCGCGGCGCTGTTCCTTGCCATGGC
GGACGACGGCGCGCTCGTCATCGACGCCGTGGCCGCCGCCGCGGCGTTCGCGGCCTGCGCCGGTGCCGCGGACCTCGCGC
TGGCCAGGGAGGTGCACCGGCGCGTCCTAGAAGCGGGAGTGGCTCTCGACGTCGTCGCGTGCAACGCGCTGGTCGACATG
TACGCCAAGTGCGGCGACGCGGCGGCCGCGCTCCGTTGCTTCCGTGCGATGGTGCCGGCCAAGAACGTGGTGACCTGGAA
CACGATGATCTCCGCGCACGCGCGCGCGGGCGAGGTCCAGGAGGCGCTGGAGCTGTTCCGGGAGATGCTGCAGCAGCAAG
GCTGCGCGCCCTCGCCGCTTCCCGACGACGCCACGTTCGTCGCGGTCCTCGGCGCGTGCGCGCGGCTCGGCGCACTGGAC
GCCGGCAGGTGGGTGCACGCCTACATGGGCAGGACCGGACGGGATGCCGCCGACGGCGTCGTGGGCAACGCGCTGATCGA
CATGTACGCCAAGTGCGGGGCCGTCGAGCAGGCCGCGGACGTGTTCGACGCAATGACGCGGCGAGACGTGTACACCTACA
CGTCCATGATCTGGGGGCTTGCGATGCACGGCCGGGGCGAGGAGGCGCTGGCGCTCTTCGGCGACATGCGACGGGCCGGC
GTGAGGCCGAACGAGGTGACCTTCCTCAGCGTCCTCTCCGCCTGCTGCCACGCCGGAAACATCGAAGACGGTCTCCGGCA
TTTCGACGCCATGGTGGAGCTGCACGGCGTTGCGCCAGGCATCGCGCACTACGGATGCGTCGTCGACATGCTCGGCCGCG
CCGGGAGGCTGGACGAGGCGGAGGATCTCGTCTCCGCGATGCCGATCCGGCCCGACGCGCTCATCTGGGGCTCGCTGCTC
GCGGCCTGCCGGGCGCACGGCCATGTCAACCGCGCCGAGCGCGTGATGCGGCGGATGGCCGAGGACGAGGCCGACGCCGG
GGACTACGTGCTCATGTCGAACATGTACGCACACGAGGGCCGACACGGGAAGGCGGTGCAGGTGAGGCGGCAGATGAGGA
GAGGCAAGGTGGACAAGGTACCCGGCTGCAGCCTCATCGAGATCGACGGCGTGGTGCACGAGTTCCAAGCAGTTCCGGCG
AACTCCCTCGAAATCTCCGATGACGCATCAGACTTTTTTAGCTGACTGCATATCCTGCTTACGCTAACGAACACTGTAAA
TTCCACTGACTAGTGAACTATGTACTTCACATGTACTCTAGTAGCTTC--------------------------------
--------------------------------------------------------------------------------
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-----------------CTGGAGATATCTTACCGATG---------------------GC--------------------
---------------GTGCAGATTTTTATAGTTGTGCACAATTAAGCTGGCCGTTTTGTAGAGAAGAAACAAGGGGTGGG
TGCTATGGAGTTGCATTGTTACCGTTCTCAGTATACTTGCAACACTCCGGTCTAAAATGTTGTGCAAAGTTCAGGTCAAG
AATGTAGCTCTCCTGGAACTATCCGGTCAAATTTAGCATTTTCAT-------------------------------CAA-
-----------------------------CGTTACTTATGTGCTCAGGCACAACACGTTCGCCGCATACA----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------AAGACATGCTGCATACGAAGATTGACACATGAAAATGG------GCAGTGTGAA
TAAATTCCATGTTAGTGACTCAGTGTTGGTATATCCAGGATGTGCTTCTTGACTCTTGTTCACAATTGG-----GAATAG
ACACAACCAAATTACCATA-------TACTACTCCCTTCGTGCCAAAATAATTAAAGTTCTGATTTTGTTTTAAGTCAAA
CTTGCTTAAGTTTGATCAACTTTATAGAAAAATGTGTTAAGA--TTTACAACATAAAAAATATATTTAATAAAGAACCTT
ATGAGACTGATTTGATGGTCTAGATGTCAATCTTAAACAAATTTGACTTGGGGCAAACCCAGAGCTCCAA-TTATTTTGA
AAGAACGTAGTACACTTGAAGCCGATAAATCAAAGCAACACTAGCACTAAACTACCATTTCTTATTTATTT-TTCTAACT
GACAGTTGCAGCAATTTGTGTGTGTCTGGCTTCGAAGAAGGACCTCAATAGCGTTGCGGCGTACCTCGACTACCCTTGAT
CCAGTTCCTGTTGCCAGTCACAACCACATGGATGCACTAGTGCAGAACCGGGCTTTAGCGCCTGTTCGTAAGGACCTTTA
GTGCCGGTTCTGCAACCGGCACTAAAGAGTGGAGACTAAAGCCCCCCCCTTAGTACCAGTTCATCATGA
>chr1B_886
TGGATCCTGTGCTAA-----------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------TCAGCACGTCGGAATTTTCCAAGCCCTACGTACATATATGACTACTGACTGGATGTCTGG
ATGACATTTTCTCGTGACGTCCGGTGGAGAGGCCATCGCCATGGGTGCACCTCGTCCACCCGCGCGGCAAGCCAGCAAGA
AGCCTGCGGCTGCTCCACTCTACTCCCCTGGACGCGGCTACAAGCCCGGTACCGCGCCTCCACACGCGGCGTCACTCCGT
CGCGGCGGCGCACCTCACGACGCCGGCGAGCTCCGGGCTCTTCTGAAGCGCTTGGCCAACGCGTCCCCGGCACCCAGCGA
GGCCGCGCCGGCGCTGCACGCCCACGCCGCAAAGCTCGGCCTCGGCTGCCGCCACCGCGGCGTCCGCGACGCCCTCGTCG
CGCTCTACCTCGCCTGCGGCCGGCGCGGCATTGCGCGCGCCTTGCTGTC---CGCCGGTGGCGGCCCAGCGCCCGACGTC
GTTTCTTGGACGGCCCTGGTGACCGGCCACGCGCGGCTGGGGCTGTTCCGCGAGGCCGCGGCGCTGTTCCTTGCCATGGC
GGACGACGGCGCGCTCGTCATCGACGCGGTGGCGGCCGCCGCGGCGTTTGGGGCCTGCGCCGGTGCCGGGGACCTCGCGC
TGGCCAGGGAGGTGCACCGGCGAGTCCTCGAAGCGGGAGTGTCCCTCGACGTCGTCGCGTGCAACGCTCTGGTCAACATG
TACGCCAAGTGCGGCGACGCGGCGGCCGCGCTCCGTTTCTTCCGTGCGATGGCGCCGGCCAAGAACGTGGTGACCTGGAA
CACGATGATCTCCGCGCACGCGCGCGCGGGCGAGCTCCAGGAGGCGCTGGAGCTGTTCCGGGAGATGCTGCAGCAGCAAG
GCTGCGCGCCCTCGCCGCTTCCTGACGACGCAACGTTCGTCGCGGTCCTCGGCGCGTGCGCGCGGCTCGGCGCACTGGAC
GCCGGCAGGTGGGTGCACGCCTACATGGGCAGGACCGGACGGGATGCCGCCGACGGCGTCGTGGGCAACGCGCTGATCGA
CATGTACGCCAAATGCGGGGCCGTCGAGCAGGCCGCGGAGGTGTTCGACGCAATGACGCGGCGAGACGTGTACACCTACA
CGTCCATGATCTCCGGGCTCGCGATGCACGGCCGGGGCGAGGAGGCGCTGGCGCTCTTCGGCGACATGCGGCGAGCCGGT
GTGAGGCCGAACGAGGTGACCTTCCTGGGCGTCCTATCCGCCTGCTGCCACGCCGGAAACATCGAAGACGGTCTCCGGCA
TTTCGAAGCCATGGCGGAGCAGCACGGCGTGGTGCCGGGCATCGAGCACTACGGCTGTGTCGTCGACATGCTCGGCCGCG
CCGGGAGGCTGGACGAGGCGGAGGATCTCGTCTCCGCGATGCCGATCCGGCCCGACGCGCTCATCTGGGGCTCGCTGCTC
GCGGCCTGCCGGGCGCACGGCCATGTCGACCGCGCCGAGCGCGTGATGCGGCGGATGGCCGAGGACGAGGCCGACGCCGG
GGACTACGTGCTCATGTCGAACATGTACGCGCACGAGGGCCGACACGGCAAGGCGGTGCAGGTGAGGCGGCAGATGAGGA
GAGGCAAGGTGGACAAGGTCCCCGGCTGCAGCCTCATTGAGATCGACGGCGTGGTGCACGAGTTCCAAGCAGTTCCGGCG
AACTCCGTCGAAATCTCCGATGACGCATCAGACTTTTTTAGCTGAC----------------------CAACACTGTAAA
TTCCACTGACTAGTAAAGATAGCCTACAAAAGCATCTACATTTTGAGACGGAGGTACTCCCTCCAATCCCGATTTACTCG
TCTTAT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TTTTAGTTCAAATTTGAAATAAAACCACGACGAGTAAATCGGAATGGAGGGAGTA
GT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------AGTTATCTTAGCGATTGCTGAACTTATAGAAGAACTTGACGTGCAGATTTTTATAGTTT
TTTTTTTTTGACGAGGTGCAGATTTTTATGGTTGTGCACAATTAACCTGGCCCTTTTGTAGAGAAGAAACATGCGGTGGG
TGCAATGGAGTTCCATTGTCACCGTTCTCAGTGTCCTTACGACGCTCCAGTCTAAAATGTTGTGCAATGTTCAGGCCAAG
AATGTAGCTCTCCAG---------GGCCATATTTAGCATTTTCATGGACTTTACTTATATATTTTTTGTGAGAGATCAA-
-----------------------------CGTTACTTGTATGCTCAGGCACAACACGTTCACGGCACATAGAGACAGAGT
GGGTAGTATAATCACTAATGCTAAACGTACAAAGAGTTACACGCAATTACACGCTGACTTTCTAACTAACCTCTCCCCTC
TGATTTTCATGGGGGTGGGCCCCTCCCCCCCTTTAATCTTCAATCAAGACTCACGAGTTTGTAAATCCTGTGTAACTCTA
TGTATGTCTAGCATTACTCGTAGTATAACACATGCTACATGTGAAGATTGGCACATGAATGGGCA---------TGTGAA
CAAGTTCCATGTTAGTGACTCAGTGTTGGTATATCCAGGATGTGCTTCTTGGCTCTTGTTCACAATTA-----AGAATAG
ATACAACCAAATTACTATGTACTCCGTACTACTCTCTTCTTTCCAAAATAATTGAAATTCTAAATTTGTTTTAAGTCAAA
CTTGCCTG----------ACTCTATAGAAAAAAATTGTTAATTTTTTACAACACCAAAAATATATTTCATAAAGAATCTC
ATGAGGTTAATTTGATGTTCTAGATGTCAACCTTAAATAATTTTGACTTAGGGCAAACCCAGAACTTCCA-TTATTTTGA
ACGGAGGTAGTACATTTGGAGCCGATAAATCAAAGCAGCACTAGCACTAAACTACCATTT----------TTTTTCAACT
GACAGCTGCAATAA-TTTGTGTGTCCTGGCTCCA---AAAAACCTCAATGGCGGCGCAACGTACTTGGACGACCCTTGAT
CCAGTTCCTATTGCCAGCCACAA---------------------------------------------------------
---------------------------------------------------------------------
>chr1A_989
GAC-----------------------------------------------------------------------------
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-------------------------------GCCATCTCCATGGACGCACCTTATCCACCCGCGCGGCAACCTAGCAGCA
AGCCCGCCGCTGCTCCACTCCGCTCCCCTGGCCGCGCCTCCAATCCCGGCCCTGCGCCTCCGCACGCGGCGTCGCTCCTT
CGCGGCGGCGCACCGCACGACGCCGGCGCGCTCCGGGCCGTTCTGAAGCGCCTGGCCACCGCGGCCTCGGCTCCCTGCGA
GGCCGCGCCGGCGCTGCACGCTCACTCCGCGAAGCTCGGCCTCTACCGTCACCACCGCGGCGTCCGCGACGCGCTCGTCG
GGCTTTACCTCGCGTGCGGCCGGCGCGGCGTCGCGTGCGACCTGTTTGCCGGCGCCGGAGGTGGCCCGGCGCCGGACGTG
ATTTCCTGGACGGCCATGGTGACGGGACACGCGCGTATGGGGCTGTTCCGCGAGGCCGCGGCGCTGTTCCTCGCTATGGC
GGACGACGGCGCGCTCGTCATCGACGCCGTGGCCGCCGCCGCGGCCTTCGCGGCCTGCGCCGGTGCCGGGGACCTCGCGC
TGGCCAGGGAGGTGCACCGGCGCGTCCTCAATGCGGGAGTGTCCCTCGACGTCGTCGCATGCAACGCGCTGGTCGACATG
TACGCCAAGTGCGGCGACGCGGCGGCCGCGCTCCGGTGCTTCCGTACGATGATGCCGACCAAGAACGTGGTGACCTGGAA
CACGATGATCTCCGCGCACGCGCGCGCGGGCGAGCTCCAGGAGGCGCTGGAGCTGTTCCGGGAGATGCTGCAGCAGCAGG
GCTGCGCGCCCTCGCCGCTTCCTGACGACGCAACGTTCGTCGCGGTCCTCTGCGCGTGCGCGCGGCTCGGCGCACTGGAC
GCCGGCAGGTGGGTGCACGCCTACATGGGCAGGACCGGACGGGATGCTGCCGACGGCGTCGTGGGCAACGCGCTGATCGA
CATGTACGCCAAGTGCGGGGCCGTCGAGCAGGCCGCGGAGGTGTTCGACGCAATGACGCGGCGAGACGTGTACACCTACA
CGTCCATGATCTCGGGGCTCGCGATGCACGGCCGGGGCGAGGAGGCGCTGGCGCTCTTCGGCGACATGCGGCGAGCCGGC
GTGAGGCCGAACGAGGTGACCTTCCTCGGCGTCCTCTCCGCCTGCTGCCACGCCGGAAACATCGAAGACGGTCTCCAGCA
TTTCGACGCCATGGCGGAGCAGCACGGCGTGGTGCCCGGCATCGAGCACTACGGCTGCGTCGTCGACATGCTCGGCCGCG
CCGGGAGGCTGGACGAGGCGGAGGATCTCGTCTCCGCGATGCCGATCCGGCCGGACGCGCTCGTCTGGGGCTCGCTGCTC
GCGGCCTGCCGAGCGCACGGCCATGTCGACCGCGCCGAGCGCGTGATGCGGCGCATGGCCGAGGACGAGGCCGACGCCGG
GGACTACGTGCTCATGTCGAATATGTACGCGCACGAGGGCCGGCACGGCAAGGCGGTGCAGGTGAGGCGGCAGATGAGGA
GAGGCAAGGTGGACAAGGTCCCCGGCTGCAGCCTCATCGAGATCGACGGCGTAGTGCACGAATTCCAAGCAGTTCCGGCG
AACTCCGTCGAAATCTCCGATGACGCATCAGATCTTTTTAGCTGAC----------------------GAACACTGTAAA
TTCCACTGACTAGTATAACTAGCCTACAAAAACATCTACATTTTGAGACATGTAGTATCTTCCTGGAGATATATGAGAAA
AGGGTTTCCCCCGCTTCATATTATAAAGCAACGAAACAGGCATCCAACACATCAATACACAGTAAGAACAAGGTACAAAG
CCCTGTTTGGTTCGGTTGTGGATTTCTAAAAGCAGCTGTGAAAATTTTGCTGTGGAAAAACAGCTTTGAAAAATCTGATG
TGAAAAAGATGTAGGTCATTTGGCAAACCAGCTGATACAGTTTTTTTCAGATTTTGGCCCGCAGCGGAATCAGATTTTGG
AAAGCACATCCTGGGCTGCTTCTGCTTTTGGTTCAGATTTTGGCAGTGGATTTCTGAAATCGGATTCTGCCGGGTTCGCC
CTTTGGTTCAGAATCTTCTGCGTGACAGCGGAATCCATCGATAAAAACTGAACCAAACAGGGCCAAAATCATGCTGGGGC
ACAGCAGAACAAGCCCCAAAGAAATCTAAAAAAGAGCTAATCCGGCTCGAGGGTGGTGGCGGTGGAGCGAAAGCCGATGC
CGCGAAACGAAGACCTGCCATAGTGTTGTCGATGATGTCACGGTCACACCGCTTGCTAAGCGGTCTCCAGAGCTATAAAA
AACCACACATTTTATAGATAGCATCAGTCACACGGCATGAAATGACATGCTCGATGACTAGTTTATTGCGGGAACATCAA
AGGGTCCAAGCAAGGGTGCCCAAAGCCACCCAAATTGGGGGGCGGCTAGAACCGGGGAGTCTAAGGGTCTTCCCAAATAG
GTCCGGGAGGTTGTCGTGGCATCAATTGCCGCCAACCACCTCCCGGAAGCAGCTCCAAAGGAACTGTGCTACAAGGCACC
GGAAGAAGATGTGGTTACAGTCTTTCGGGACCAAACAAATGGGACAGAGGACATCCCAGGGCCGTTACGTTTCTTGACCT
CCGTCCCCGACGGGAGACGGCCTCGGACCCATTTGCCAGAGAAAGATGTGTATCTTCAAGGGAAGTTTGATCTCCCAGAT
CATCGATAGTTCCACCGGGACAGGGGTGGGAACGTTCGCCTGGTAAAGTGACCTAGTCGAGAATCTGCCATTTGGCTCCA
GGTGTGATACGCGTCTACTGGAGATATCTTACCGATTGCTGAACTTATAGAAGAACTTGC--------------------
---------------GTGCAGATTTTTATAGTTGTGCACAATTAAGCTGGTCGTTTTGTAGAGAAGAAACATGGGGTGGG
TGCTATGGAGTTCCATTGTCACCGTTCTCAGTGTCCTTGCGACCCTCCAGTCTAAAATGTTGTGCAATGTTCAGGCCAAG
AATGTAGCTCTCGTGGAACTATCCGGTCAAATTTAGCATTTTCAT-------------------------------CAAT
GTTACTTATATTTTTTTGGGAGAGATCAACGTTACTTATATGCCCAGGCACAACACGTTCACGGCACACAGGGACAGAGT
GAG-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------TAACACATGCTACATGTGAAGATTGACACATGAATGGGCAGTGACGCAGTGTGAA
CAAATTACATGTTAGTGACTCAGTGTTGGTATATCCAGGATGTGCTTCTTGACTCCTGTTCACAATTGAGAATAGAATAG
ACACAACCAAATTACTATGCACTATTCT--------TTCGTTCCAAAATAATTGAAGTTCTAAATTTGTTTCAAGTCAAA
CTTGCTTAAGTTGACCAAACCCTATATAAAAATGTGTTAAGA--TTTACAAACCAAGGA--ATATTTCATAAAGAATCAC
ATGAGACTAATTTGATTTTCTAGATGTCAAGCATAAACAAATTTGACTTGGGGCAAGCCCATAACTTCAATTTATTTTGA
ACGGGGATAGTACATTTGAACTCGATAAATCAAAGCAACACTAGCACTAAACTACCATTTCTTATTTATTTTTTCCAACT
GATAGCCGCAACAA-TTGTGTGTGCCCGGCTCCGAAGAAGGACCTCAATGGAGACACGACGTACCTCGACGACCCCTGCT
CCAGTTCCCATTGCCAG---------------------------------------------------------------
---------------------------------------------------------------------
>SNPs
SSSSSSSS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS------------------------S---------S----S--------------------
-------------S-S---S----S-------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S-------------------S----------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------S-----------
----------------------------S------------S-S------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
----------------------S--------S------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------S----------------------------------------
------------S------S--------------------------------------------------S--S------
---------------------------S----------------------------------------------------
--------------S-----S---------S-S---S-------S---------S-------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
------------------------------S-----------------S-------------------------------
-------------------S------------------------------------------------------------
------S---------------------------------------SSSSSSSSSSSSSSSSSSSSSS------------
--------------S--SSSS-SSSSSS-S-SSSS--SS-S-SSSSSS--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
-----------------------------------------------------------------------S--------
------------S------S------------S-S-----S--S----S------------------S-------S----
--------------------------------------------------------------------------------
---------------------------------------S--------------------S-S---S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-------S---SS-----------------SSS-S----------------
S-------------------------------------------------------------------S-----------
---------------S--S---------------S------S-----------S-------S-S----------------
------------SSSSS----S-------------------------------S-------------S--------S--S
--------S--------S------------S--------------------------------S--S-------------
-S-S-S--------S------------------------------------------------------------S----
-----S----S---S---------S------S-----------------S---SS---S-----------S---------
---------S-------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_481
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GAGTGATCGAGCTGTAGGG
C-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2215
--------------------------------------------------------------------------------
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------------------------------------------------------ATGCGTCGTCGACATGCTC-------
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---------------------------------------------------------------------
>forward_850
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------TGGACTGTTGGCACATCTCC------------------------------
--------------------------------------------------------------------------------
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>reverse_3955
--------------------------------------------------------------------------------
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----------------------------------ACTTGCAACACTCCGGTCTA--------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------
