>input_sequence_47217
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--GCGCAGCGGTGGAGCTCGGTGGATTGTCGGGGCAAATGGA------TTCCAGGGCCGCC------CTCTTCTGCTTCC
TGGCCGTCGCCTCCTCCCTCCTGCACCCCGCCAGATCTGACGGTAAGAGCAGGCGCTGCTCTTCTTTTCTT---------
-------------------TCGCTCGCTGCTGCATTTGTGATTCGGTTCAGCTCTTCGGCCGGATCTGATCCGCGCGGTG
TGGATTTGGAGGTTGGTTCTTGTAATC---TAACCGCTTAGGATGATGAGCA-----TAGTGTAGGCGTATGGCCTAGGA
ACCTGCTCCAGGCG-------AGGATGTTCGTCTGAATTTCATTTTCAGTGGTACATAGCATCCTAATTCCTGAATTCTA
CTTAGCTTGCCGTTGCCTACGGATG-------TGCCGAGTTCTTGGATGTCACTAAGCGGTTTCAGTGGGTTGGTGA---
-------------GAGATCTGGTCTTCCAAGATCTCTTGCTATTTTTTACCTTCATTTGGGACATGATAATTACTCCAAC
TGTTCCAGCGCACACA---------------------------------------------------------------A
GATTCAGCATGCATGATCTGATGGTCAGGTCTCGTTGGTCAACAATTGCAGTGTTCT---GTTCGCTCCAGCT-------
-------------GGTAGCTGGTACTCTGCTCATGTTCTGTTGCAGGGCACGGTCGTGGCGACAAATGAACGGGTCGCTG
TT-----------CAAGTGTACTAGGCACAAGACACACAGCTTAATTAGTACTATGATC---------------------
----------------------------------------------------------------------------AACT
TATACTGGAAGATTTAGCAAT------AAAAACTTGGGAGTGCTTTTGCCTCGTAGAATTCTGTTT-CTCACTCACAGCA
TA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GTTGCACTGCATGTTTAGACAGGAAATGAAGAGAACTC
TGCATCCGTTGTTTTGATGCTGCAGCCTATTACCTTGTTGCCCGCACGATCCTTTGAGTGTGCGCGTTGGTGTTGGCTGT
GTGCATCTTAGTACTGCAGAGGAGGACGGGGGTGTGTGTTAATTGTGTTTGTATCCCCTTGATGCTTCATTATGAGT---
---------------------------------------------------------------TAATTAAACCACCCTTG
ATCGGGAAAAAAATCACCTTTG-----TAAACTGCTTGCTTGATACTGGTTACTGTTTT-CAGGGGACGACAACCAGCTC
CTCAAGGGGATCAACAGCTACAGAGCTTCGCTCAAGGTCCCGGCGCTCACCGAGAACAGCAATGCCGACTGCCTGGCCGA
GCAGCTAGCAAAGAAGTTCAAGGGCCAGGAGTGCACCAACACCACCGGAGCCAACACCGTGCCCGGCACCGAGCCGCAGT
TCCCCGACTACCCCCAGTTTCTCGACCGCTGCCACCTCAACGCGTCGGTGACCGAGGACGGGCAGGTGATGCCGGCATGC
GTGCCCGGCCTTGTGGCCGACATTGTGCTGACCAACTACACCAAGTCCCAGCACAACCGGTTCCTCAACGACACCAAGTA
CTCCGGCATCGGGATCGCCAACGAGGGGGACTGGGTGGTCGTCGTCCTCAGCACCAGCACCGACTCCGGCGACTACTCCC
CTGCTCCCCCGGGCTCCAACTGGGCTCCGTCGGTCCAGCCGTTCAGCTGGATGATTGTTTCGCTGGTAGGGTTCGTAGTT
TTGCTGATGAAGTGAGAAGATCGGTGTTGTGTTGTTCATCTCGCGTGCTACACCGCTGCAAATGAGTGTGTTGATCTT--
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>chr2D_1_TraesCS2D01G145400
AAATGTGGTACTGACCTGTTACCCTAGCCCCAAGTGTGGTGGTTTTGGGTAAATAACTCGTTCAATGATGGCTCGGAGTT
CATACAGACACACCTTCCTTTGAAGGAGAAGTGGGCTCGCGCCTTCGACGTAGGGGG-TGTTAGGTACGGCCACATGACG
AGCAACATG--------------------ACTAATCGTGACCGTGCT--CGTTCGCTCCTAGCCGTTGGAATTGCGACTA
ATGCTCATATTAGTCCCGGGTCCAAACCTGACCGGGACTAGTGCTCCGGATGAAAGATCAGTTTTCTACTAGTGCGCTAG
CTTCATACCATTTCTTCAGTGCCAAAGCTTCTGTTGCAGCGGCATCTTCTGTTGCAGCGGCATCAAGCACATGTTGTTGA
CCCAGCAAAAGCCTCACCCAAGTGGTTTCAAAGAAGCGCCGTGGTGGCTCCGCTTCCATCTCTCATGAAGCATGCATCCA
CGTTCATTTTACAAAGATAATTACAGTACTTGTATACCAGATGGTTTGAAATAGACTCGAATCCTCT---TATTTCAACT
GGACGGTTTGAAATAGACTCGAAC-TCTCA-AAATATGGGATGGACTTGGTAGGGAGAAAAGGAGGAAGCAACACCGACG
CCCTGATGTTGAGCTGTCCGCCTGTCCCGGCGTCGGTCCGGT-----GGTACC-AACTCCATGGAAAACCCGCGATGCGC
CGCTTTCTTAATTCGTTTGCTTCGCGTAATCAATCTGCCACTGCCGCGCACGTTGCCGGGCGCCTTTTATTAGTAGCACA
CCGACAGTGTTAGTTAGGGATCTTTTTTCTTAA---CAAGAAAGCGACGGCAGGTAAACCATTTTAACACCGGCAGAAGA
ACACTTT-GTTAACAACAGCGCCGCTTTTACCTTTTAGGACAGAGGAGTAAGCAAGTGAAGTGGCAGTGGTTGGCCGCAG
ACAGCAGCAGCTCGCCTCCTTCCTTCCTTCCTCCTCACTCCCCCCTATATACCTGCTACCCTACCCGTCGG----AGGGT
GCGCGCAGCGGTGGAGCTCGGTGGATTGTCGGGGCAAATGGA------TTCCAGGGCCGCC------CTCTTCTGCTTCC
TGGCCGTCGCCTCCTCCCTCCTGCACCCCGCCAGATCTGACGGTAAGAGCAGGCGCTGCTCTTCTTTTCTT---------
-------------------TCGCTCGCTGCTGCATTTGTGATTCGGTTCAGCTCTTCGGCCGGATCTGATCCGCGCGGTG
TGGATTTGGAGGTTGGTTCTTGTAATC---TAACCGCTTAGGATGATGAGCA-----TAGTGTAGGCGTATGGCCTAGGA
ACCTGCTCCAGGCG-------AGGATGTTCGTCTGAATTTCATTTTCAGTGGTACATAGCATCCTAATTCCTGAATTCTA
CTTAGCTTGCCGTTGCCTACGGATG-------TGCCGAGTTCTTGGATGTCACTAAGCGGTTTCAGTGGGTTGGTGA---
-------------GAGATCTGGTCTTCCAAGATCTCTTGCTATTTTTTACCTTCATTTGGGACATGATAATTACTCCAAC
TGTTCCAGCGCACACA---------------------------------------------------------------A
GATTCAGCATGCATGATCTGATGGTCAGGTCTCGTTGGTCAACAATTGCAGTGTTCT---GTTCGCTCCAGCT-------
-------------GGTAGCTGGTACTCTGCTCATGTTCTGTTGCAGGGCACGGTCGTGGCGACAAATGAACGGGTCGCTG
TT-----------CAAGTGTACTAGGCACAAGACACACAGCTTAATTAGTACTATGATC---------------------
----------------------------------------------------------------------------AACT
TATACTGGAAGATTTAGCAAT------AAAAACTTGGGAGTGCTTTTGCCTCGTAGAATTCTGTTT-CTCACTCACAGCA
TA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GTTGCACTGCATGTTTAGACAGGAAATGAAGAGAACTC
TGCATCCGTTGTTTTGATGCTGCAGCCTATTACCTTGTTGCCCGCACGATCCTTTGAGTGTGCGCGTTGGTGTTGGCTGT
GTGCATCTTAGTACTGCAGAGGAGGACGGGGGTGTGTGTTAATTGTGTTTGTATCCCCTTGATGCTTCATTATGAGT---
---------------------------------------------------------------TAATTAAACCACCCTTG
ATCGGGAAAAAAATCACCTTTG-----TAAACTGCTTGCTTGATACTGGTTACTGTTTT-CAGGGGACGACAACCAGCTC
CTCAAGGGGATCAACAGCTACAGAGCTTCGCTCAAGGTCCCGGCGCTCACCGAGAACAGCAATGCCGACTGCCTGGCCGA
GCAGCTAGCAAAGAAGTTCAAGGGCCAGGAGTGCACCAACACCACCGGAGCCAACACCGTGCCCGGCACCGAGCCGCAGT
TCCCCGACTACCCCCAGTTTCTCGACCGCTGCCACCTCAACGCGTCGGTGACCGAGGACGGGCAGGTGATGCCGGCATGC
GTGCCCGGCCTTGTGGCCGACATTGTGCTGACCAACTACACCAAGTCCCAGCACAACCGGTTCCTCAACGACACCAAGTA
CTCCGGCATCGGGATCGCCAACGAGGGGGACTGGGTGGTCGTCGTCCTCAGCACCAGCACCGACTCCGGCGACTACTCCC
CTGCTCCCCCGGGCTCCAACTGGGCTCCGTCGGTCCAGCCGTTCAGCTGGATGATTGTTTCGCTGGTAGGGTTCGTAGTT
TTGCTGATGAAGTGAGAAGATCGGTGTTGTGTTGTTCATCTCGCGTGCTACACCGCTGCAAATGAGTGTGTTGATCTTAT
GCCCGTGCCAATCATTTCTGTATTATTCAGATT-TCATTTCTACTTGATCCAGTTGACACCACAGTACAGTAGCATATGC
ATGCCACGAGGTTTGGGATCAAAACTTTTTCTCTCGC-TATTTGCCTTTGACCACAATTGGCAATGGCTTTATGCATATT
GTGGTCAGGTGATGTGCAGTATTGAACCACATCTTTCATCTTTCAACATTTAGCTAAAGCCAGAACTTCAACTTT-GTTG
GGTGTTGGCACTGTGCACTCAATTTCTTTTAACATCTGTACTGCACATCTTTCAACTTTGATGTATGGCGTTTACTGTGC
TGAGCTCACGTTTTTTGAGTCTCCGTATGAGCGAGAGGTTACTGATGAGATCCCGAACATGACTTCGGGGATTGTTAAGG
TCGCCAGAGGGGAGGTCTCTGAGACGCAGATCGTGCAGAGGCTTCGGGAGCTTGTCCCTGGGGACTTCCAGTGGGACCTC
GTCAGTCTCGATGATAAGATGTTCAGAGTTGAGTTTCCTTCGGTTGAGGACCTGCAGAGGTTGCTGAGTTTTGGGATGTG
TAATGTACCGGGAACTGATGGCATCCTTGAGTTCCACGAATGGAAGCTGGTGGAGCCTTAGGGTGCGCCGCTTACTCAGG
CGTGGTTGCGTTTTTCCGGGGCCCCATCCAAGCCTTTGCAGGATGCTCGCGCTGTGGCCAGCTTGGGTATTTTGATTGGG
-AAGCCTGAGCGAGTGGATATGGCGTTCACCAGAGCTCATGGGATTGCTCGGGTTCTGGTTAGTATTCTGAACGTTGAGT
ATGTGCCGGAAGTGGTTAAGTGGGCTTACCAAGGCAGGATCTATGATTTGGTTATTGAGTTTGAGGATGAGAGCCTTTTG
GTTGCGGCGACTCACGGGTCCGATGTGGATATGCACGAGGGTGACGGCAGCGCAGGAGCGAGGGAGCCGCCGGTCGAGGA
TTCTGGACGACAAATGTCCAAGGGACCGGGGCCCGACACTGC
>chr2A_60
-----------------------------------------------------------GTTCAATGATGGCTCGGAGTT
CATACAGACACACCTTCCTTTGAAGGAGAAGTGGTCTCGAGCCTTCGACGTAGGGGGGTGCTAGGTACGGCGACATGACG
AGCAACATG--------------------ACTAATCCTGACCGGGCCCCCGTCCACTCATAGCCGTTGGAATCGGGACTA
ATACTCATATTAGTCCCGGGCCCAAACCCGACCGGAACTAGTGCTTCGGATGAAAGATTAGTTTTCTACTAGTGCACTAG
CTCCATACCATT-CTTCAATGCCAAAGCTTCCGTTGCAGC------------------GGCATCAAGCACATGTTGTTGA
CCCAGCAAGAGCCTCACCCCAGTGGTTTCAAAGAAGCGCTGCCGTGGCTCCGCTTCCATCTTTCATGAAGTATGCATTCA
CGTTCATTTTATAAAGATAATCACG-----------------------------ACTCGAATCCTCATCATATTTCAAAT
CGACGGTTTGAAATAGACCCGAACCTCTCG-AAACATCGGATGGATTTGGTAGGAAGAAAAGGAGAAAGCAACACCGACG
CCCTG-CGTTGAGCTGTCCGCCCGTCCCGGCGTCGGTCCGGTCCGGTGGTACC-AACTCAATGGAAAACCCGCGGTGCGC
CGCTTTCTTAATTCGTTTGCTTCACGTAATCAATCTGCCACTGCCGCGCACGTTGCCGGGCGCCTTTTATTAGTAGCGCA
CCGACAGTGTTAGTTAGGGATCTCTTTTCCTAC---CAAGAAAGCGACGGCAGGTAAACCATTTTAACGCCGGCAGAAGA
ACACTTCCGTTAACAACAGCGCCGCTTTTACCTTTTAGGACAGAGGAGTAAGCAAGTGCAGTGGCAGTGGTTGGCCGCAG
ACAGCAGCAGCTCGCCTCCTTCCTTCCTTCCTCCTCACTCCCCCCTATATACCCGCCACCCTACCCGTCGG----AGGGT
GCGCGCAGCGGTGGAGCTCGGTGGATTGTCGGGGCAAATGGGTTCCAGTTCCAGGGCCGCC------CTCTTCTGCTTCC
TGGCCGTCGCCTCCTCCCTCCTGCACCCCGCCAGATCTGACGGTAAGAGCAGGCGCTGCTCTTCTTTTCTT---------
-------------------TCGTTCGCTGCTGCATTTGTGATTCGGTTCAGCTCTTCGGCCGGATCTGATCCGCGCGGTG
---------------GTTCTTGTAATC---TAACCGCTTAGGAGGATGGGCA-----TAGTGTAGGCGTATGGACTAGGA
ACCTGCTCCAGGCG-------AGGATGTTCGTCTGAATTTCATTTTCAGTGGTACATAGCATCCTAATTCCTGAATTCTA
CTTAGCTTGCCGTTGCCTACCGATG-------TGCCGAGTTCTTGGATGTCACTAAGCGGTTCTAGTGGGTTGCCTACCG
TTGCCTATCGTCTGAGATCGGGTCTTCCAAGATCTCTTACTCTGTTTTAGCTTCCATTTAGACACGATAATTAGTCAAAT
TGTTGCAGCACAGATA---------------------------------------------------------------A
GATTCAGCATGCATGATCTGATGGTCAGGTCTCGTTGGTGAGCAATTGCAGTGTTCTTCTGTTCGCTCCAGCTGGTTGCT
GGTGCTCGTGTTCGGTTGCTGG-----TGCTCATGTTCTGTTGCAGGGCACGGTCGTGGCCACAAATGAACGGCTCGCTG
TTTGAGTTGGTGA-------------------ACACAACGCTTAATTGGTACTCCCTCCGTAACAAAATGTGTAAGCCGT
TTTTTATGCCCCGTGCAAAACCAAAAAAACGCCCTACATTTTGGTACAGAGGTAGTACTATGATCTACTCCGTAGTAACT
TATACTGGAAGAGTTATTCAGCAATAAAAAAACTTGGGAGTGCTTTTGCTTCGTAGAAATCTGGGTACTCACTCACAAAA
TA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------GTTGC--------TTTAGCCACAAAATGAAGAGAACTC
TGCACCCATTGTTTTGATGCTGCAGCCTATCACCTTGTTGCCTGCGCGATCCTTTGTGTGGGCGCGTTCATGTTTGATGT
GCACATCCTAGTCGTGCAGAGGCCGAT-----TGTGTGCTCATTGTGTTTGTATCCCCTCGATGCTTCATTACGAGCTAA
-------------------------------------------------------------------TAAAACGCCCTTT
ATCGGGAAAAAAAGTCACCG-TGTAATTAAACTGCTTCCTTAATACTGGTTACTGTTTT-CAGGGGAGGACAACCAGCTC
CTCAAGGGGATCAACAGCTACAGAGCTTCACTCAAGGTCCCGGCGCTCACCGAGAACAGCAATGCCGACTGCCTGGCCGA
GCAGCTAGCGAAGAAGTTCAAGGGCCAGGAGTGCACCAACACCACCGGAGCCAACACCGTCCCCGGCACCGAGCCGCAGT
TCCCCGACTACCCCCAGTTCCTCGACCGCTGCCACCTCAACGCGTCGGTGACCGAGGACGGGCAGGTGATGCCGGCATGC
GTGCCCGGACTCGTGGCCGACGTTGTGCTGACCAACTACACCAAGTCACAGTACAACCGGTTCCTCAACGACACCAAGTA
CTCCGGCGTCGGGATCGCCAACGAGGGGGACTGGGTGGTCGTCGTGCTCAGCACCAGCACCGACTCCGGCGACTACTCCC
CTGCTCCCCCGGGCTCCAACTGGGCTCCTTCGGTCCAGCCATTCAGCTGGATGATTGTTTCGCTGGTAGGGTTCGTAGTT
TTGCTGATGAAGTGAGAAGATAAATGTTGTGTTGCTCATCTCGCGTGCTACACCGCTGCAAATGAGCGTGTTGATCTTAT
GCCCGTGTCAGTCGTTTCTGTATCTTTCAGATTGTCATTTCTACTCGGTCCAGTTGACACCACAGTACAGTAGCATATAC
ATGCCGCGAGGTTCGGGATCAAAACTTTTTTTCTTCAGTATTTTCCTTTGACCACAATTGGCAACGGCTTTGGG-ATATT
GTGGTCAGGTGATGTGCATTATTGAACCACATCTTTCATCTTTGAACATTTAGCTAAAGCCAGAACTTCAACTTT-GTTG
GGTGTTGGCACTGTGCACTCAATTTCTTTTAACATCTGTACTGCGCAT--------------------------------
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>chr2B_60
-----------------------------------------------------------GTTCAATGATGGCTCGGAGTT
CATACACACACACCTTCATTTGAAGGAGAAGTGGGCTCGTGCCTTCGACGTAGGA-GGTGCTAGGGACGGCCACATGACG
AGCAACATGGCCATATGACGAGCAACATGACTAGTCCTGACCGTGTCCCCGTCCGCTCCTAGTCGTTGGAATCGGGACTA
ATGCTCATATTAGTCCCGGGCCCAAACCCGACCGGGA-TAGTGCTCCGGATGAAAGATCAGTTTTCTACTAATGGGCTAG
CTCCATACCATT-CTTCAATGCCAAAGCTTCCGCTGCAGC------------------GGCATCAAGCACATGTTGTTGA
CCCAGCAAGAGCCTCACCGCAGTGGTTTCAAAGAAGCGTCGTTGTGGCTCCGCTTCCATCTTTCATGAAGCATGCATCCA
CGCTCATTTTATACAGATAATCACGGTACTTGTATACCAGAAGGTTTAAAATAGACTCGAATCCTCTTCATATTTCAAAT
CGACGGTTTGAAATAGACTCGAACCTCTTAGAAATACGGGATGGACTTGGTAGGGAGAAAAGGAGGAAGCAACACCGACG
CCCTGACGTTGAGCTGTCCGCGTGTCCCGGCGTCGGTCCGGT-----GGTACCAAACTCAATGGAAAACCCGCGATGCGC
CGCTTTCTTAATTCGTTTGCTTCACGTAATCAATCTGCCACTGCCGCGCACGTTGCCGAGCGCCTTTTATTAGTAGCGCA
CCGACAGTGTTAGTTAGGGATCTTTTTTCTTAATAACAAGAAAGCGACGGCAGGTAAACCATTTTAACACCGGCAGAAGA
ACAGTTTCGTTAACAACAGCGCCGCTTTTACCTTTTAGGACAGAGGAGTAAGCAAGTGCAGTGGCAGTGGTTGGCTGCAG
ACAGCAGC---TCGCCTCCTTC----CTTCCTCCTCACTCCCCCCTATATACCTGCTACCCTACCCGTCGGTCGGAGGGT
GCGCGCAGTGGTGGAGCTCGGTGGATTGTCGGGGCAAATGGA------TTCCAGTTCCAGGGCCGCGCTCTTCTGCTTCC
TGGCCGTCGCCTCCTCCCTCCTGCACCCCGCCAGATCTGACGGTAAGAGCAGGCGCTGCTCTTCTTTTCTCTCCTTTCTT
TGCGGCCCGATTCGCTCGCTCGCTCGCTGCTGCATTTGTGATTCGGTTCTGCGCTCCAGCCGGATCTGATCCGCGCGGTG
TGGATTTAGAGGTTGGTTCTTGTAATCTGGTAATCGCTTAGGATGATGAGCATAGTCTAGTGTAGCCGTATGGACTAAGA
GCCTGCTACGGCCTACGAGCCAGGATGCTCGTCTGGATTTCGGTGCCACATGACA-------------TCCTAGCTCCTA
GTTGGTTTGCCGTTGGATGTCCATGTGCCGACTGCCGAGTTCTTGGATGTCACTAAGCGGTTCTATTGGGTTGGTGA---
-------------GAGATCTGGCCTCCCAAGATCTCTTACTCTGTTTTACCTTCGTTTGGGACATGGTAATTTGTCAAAT
CGTTCCAGCACACACGAGCTGATGCATCGTAGGCCGGGGAGTCCCCCCTTTTCGAAAAAAAAAGGTTCCAGCACACACGA
GATTCAGCATGCATGATCTGATGGTCACGTCTCGTTGCTGAGCAATTGCAGTGTTCT---GTGCGCTCGAGCT-------
-------------GGTAGCTGG-----TGCTCATGCTCTGTTGCAGGGCACGGTCGTGGCCACAAATGAACGGGTCGCTG
TTTGAGTTGGTGTCAAGTGTGCTAGGCACAAGACACACCGCTTAGTTGGTACTCCGTCCGTAACAAAATGTGTAAGCCGT
TTTTTATGCCCTGTGCAAAACCAAAAAAACATCTTACATTTTGGTACAGAGGTAGTACTATGATCTA----------ACT
TATACCGGAAGATTTATTTAGCAATA-AAAAACTTGGGAGTGCTTTTGCCTCGTAGAGATCTGGTTACTCGTGAACGAAA
TACTCCCTCCGTCCCAAAATTCTTGTCTTAAATTTGTCTAAATACGGATGTATCAAGTCACATTTTAGTATTATATATAT
CCGTATCTAGACAAATCTAAGACAAGAATTGTCTAAATACAGATGTATCTAGTCACATTTTAGTATTATATACATCCGTA
TCTAGACAAATATAAGACAAGAATTTTGGGACGGAGGGAGTGGTTGC--------TTTAGCCACGAAATGAAGAGAACTC
TGCACCCATTGTTTTG------------ATCACCTTGTTGCC----CGATCCTTTGTGTGGGTGCGTTCATGTTTGATGT
GTGCATGCTAGTCGTGCAGAGTCTGAA-----TGTGCGCTCATTGTTTTTCCCCTTGTAATTAAACTCCTAGTCTTGCAG
TGCAGACTCTGCATGCTAGTCGTGCAGAGTCTGAATGTGCGTTCATGTTTGATGTGTGAATGCTAATAAAAACGCCCTTT
ATCAGAAAAAAAAAGTCACCTTGTAATTAAACTGCTTGCTTGATACTGGTGACTGTTTTTCAGGGGAGGACAACCAGCTC
CTCAAGGGGATCAACAGCTACAGAGCTTCGCTCAAGGTCCCGGCGCTCACCGAGAACAGCAATGCCGACTGCCTGGCCGA
GCAGCTAGCGAAGAAGTTCAAGGGCCAGGAGTGCACCAACACCACCGGAGCCAACACCGTGCCCGGCACCGAGCCGCAGT
TCCCTGACTACCCCCAGTTCCTTGACCGCTGCCACCTCAACGCGTCGGTGACCGAGGACGGGCAGGTGATGCCGGCATGC
GTGCCCGGCCTTGTGGCCGACATTGTGCTGACCAACTACACGAAGTCCCAGTACAACCAGTTCCTCAACGACACCAAGTA
CTCCGGCGTCGGGATCGCCAACGAAGGCGACTGGGTGGTCGTCGTCCTCAGCACCAGCACCGACTCCGGCGACTACTCCC
CTGCTCCCCCGGGCTCGAACTGGGCTCCTTCGGTCCAGCCGTTCAGCTGGATGATTGTTTCGCTGGTAGGGTTTGTAGTT
TTGCTGATGAAGTGAGAAGATCGATGTTGTGTTGCTCATATCGCGTGCTACACCGCTGCAAATGAGCGTGTTGATCTTAT
GTCCGTGTCAATCGTTTCTGTATCATTCAGTTTTTCATTTCTACTTGGTCCAGTTGACAGCACAGTACAGTAGCATATGC
ATGCCACGAGGTTTGGGATCAA---TTTTTTTTTTCAGTATTTGCCTTTGACCACAATTGGCAATGGCTTTATGCATATT
GTGGTCAGATGATGTGCATTATTGAACCACATCTTTCATCTTTGAACATTTAGCTAAAGACAGAACTTCAACTTTTGTTG
GGTGTTGCCACTGTGCACTCAATTTCTTTTA-------------------------------------------------
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>chr6D_2899
ACTTAT--------------------------------------------------------------------------
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-----------------------------------------------------------GATGTATGGCGTTTACTGTGC
TGAGCTCACGTTTTTTGAGTCTCCGTATGAGCGAGAGGTTACTGATGAGACCCCGAGCATGACTACGGGGATTGTTAAGG
TCGCCAGAGGGGAAGTCTCTGAGACGCAGATCGTGCAGAGGCTTCGGGAGCTTGTCCCTGGGGACTTCCAGTGGGACCTC
GTCAGTCTCGATGATAAGATGTTCAGAGTTGAGTTTCCTTCGGTTGAGGACCTGCAGAGGTTGCTGAGTTTTGGGATGTG
TAATGTACCGGGAACTGATGGCATCCTTGAGTTCCACGAGTGGAAGCTGGTGGAGCCTCAGGGTGCGCCGCTTACTCAGG
CGTGGTTGCGTTTTTCCGGGGCCCCATCCAAGCCTTTGCAGGATGCTCGCGTTGTGGCTAGCTTGGGTATTTTGATTGGG
-AAGCCTGAGCGAGTGGATATGGCGTTCACCAGAGCTCACGGGATTGCTCGGGTTCTGGTTAGTATTCTGAACGTTGAGT
ATGTGCCGGAAGTGGTTAAGTGGGCTTATCGAGGCAGGATCTATGATTTGGTTATTGAGTTTGAGGATGAGAGCCTTTTG
GTTGCGGCGACTCACGGGTCCGATGTGGATATGCACGAGGGGGACGGCAGCGCAGGAGCGAGGGAGCCGCCGGTCGAGGA
TTCTGGACGACAGATGTCCAAGGGACCGGGGCCCGACACTGC
>chr6D_2899
ACTTAT--------------------------------------------------------------------------
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-----------------------------------------------------------GATGTATGGCGTTTACTGTGC
TGAGCTCACGTTTTTTGAGTCTCCGTATGAGCGAGAGGCTACTGATGAGACCCCGAGCATGACTACGGGGATTGTTAAGG
TCGCCAGAGGGGAGGTCTCTGAGACGCAGATCGTGCAGAGGCTTCGGGAGCTTGCCCCTGGGGACTTCCAGTGGGACCTC
GTCAGTCTCGATGATAAGATGTTCAGAGTTGAGTTTCCTTCGGTTGAGGACCTGCAGAGGTTGCTGAGTTTTGGGATGTG
TAATGTACCGGGAACTGATGGCATCCTTGAGTTCCATGAGTGGAAGCTGGTGGAGCCTCAGGGTGCGCCGCTTACTCAGG
CGTGGTTGCGTTTTTCCGGGGCTCCATCCAAGCCTTTGCAGGATGCTCGCGTTGTGGCCAGCTTGGGTATTTTGATTGGG
-AAGCCTGAGCGAGTGGATATGGCGTTCACCAGAGCTCACGGGATTGCTCGGGTTTTGGTTAGTATTCTGAACGTTGAGT
TTGTGCCGGAAGTGGTTAAGTGGGCTTATCGAGGCAGGATCTATGATTTGGTTATTGAGTTTGAGGATGAGAGCCTTTTG
GTTGCGGCGACTCACGGGTCCGATGTGGATATGCATGAGGGTGACGGCAGCGCAGGAGCGAGGGAGCCGCCGGTCGAGGA
TTCCGGACGACAGATGTCCAAGGGACCGGGGCCCGACACTGC
>chr1D_2899
ACTTAT--------------------------------------------------------------------------
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-----------------------------------------------------------GATGTATGGTGTTTACTGTGC
TGAGCTCACGTTTTTTGAGTCTCCATATGAGCGAGAGCTTACTGATGAGTCACCGAACATGACTACGGGGATTGTTAAGG
TCGCCAGAGGGGAGGTCTCTGAGACGCAGATCGTGCAGAGGCTTCGGGAGCTTGTCCCTGGGGACTTCCAGTGGGACCTC
GTCAGTCTCGATGATAAGATGTTCAGAGTTGAGTTTCCTTCGGTTGAGGACCTGCAGAGGTTGCTGAGTTTTGGGATGTG
TAATGTACCGGGAACTGATGGCATCCTTGAGTTCCACGAATGGAAGCTGGTGGAGCCTCAGGGTGCGCCGCTTACTCAGG
CGTGGTTGCGTTTTTCCGGGGCCCCATCCAAGCCTTTGCAGGATGCTCGCGTTGTGGCCAGCTTGGGCATTTTGATTGGG
-AAGCCTGAGCGAGTGGATATGGCGTTCACCAGAGCTCATGGGATTGCTCGGGTTTTGGTTAGTATTCTGAACGTTGAGT
ATGTGCCGGAAGTGGTTAAGTGGGCTTACCAAGGCAGGATCTATGATTTGGTTATTGAGTTTGAGGATGAGAGCCTTTTG
GTTGCGGCGACTCACGGGTCCGATGTGGATATGCACGAGGGTGACGGCAGCGCAGGAGCGAGGGAGCCGCCGGTCCAGGA
GTCTGGACGACAGATGTCCAAGGGACCGGGGCCCGACACTGC
>chr4D_2899
ACTTAT--------------------------------------------------------------------------
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-----------------------------------------------------------GATGTATGGCGTTTACTGTGC
TGAGCTCACGTTTTTTGAGTCTCCGTATGAGCGAGAGGTTACTGATGAGACCCCGAGCATGACTACGGGGATTGTTAAGG
TCGCCAGAGGGGAGGTCTCTGAGACGCAGATAGTGCAGAGGCTTCAGGAGCTTGTCCCTGGGGACTTCCAGTGGGACCTC
GTCAGTCTCGATGATAAGATGTTCAGAGTTGAGTTTCCTTCGGTTGAGGACCTGCAGAGGTTGCTGAGTTTTGGGATGTG
TAATGTACCGGGAACTGATGGTATCCTTGAGTTCCACGAGTGGAAGCTGGTGGAGCCTCAGGGTGCGCCGCTTACTCAGG
CGTGGTTGCGTTTTTCCGGGGCCCCATCCAAGCCTTTGCAGGATGCTCGCGTTGTGGCCAGCTTGGGTATTTTGATT-GG
-AAGCCTGAGCGAGTGGATATGGCGTTCACCAGAGCTCACGGGATTGCTCGGGTTCTGGTTAGTATTCTGAACGTTGAGT
ATGTGCCGGAAGTGGTTAAGTGGGCTTATCGAGGCAGGATCTATGATTTGGTTATTGAGTTTGAGGATGAGAGCCTTTTG
GTTGCGGCGACTCACGGGTCCGATGTGGATATGCACGAGGGTGACGGCAGCGCAGGAGCGAGGGAGCCGCCGGTCGAGGA
TTCTGGACGACAGATGTCCAAGGGACCGGGGCCCGACACTGC
>chrUn_2899
ACTTAT--------------------------------------------------------------------------
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-----------------------------------------------------------GATGTATGGTGTTTACTGTGC
TGAGCTCACGTTTTTTGAGTCTCCGTCTGAGCGTGAGGTTACTGATGAGACCCCGAACATGACTACGGGGATTGTTAAGG
TCGCCAGAGGGGAGGTCTCTGAGACGCAGATCGTGCTGAGGCTTCGGGAGCTTGTCCCTGGGGACTTCCAGTGGGACCTC
GTCAGTCTCGATGATAAGATGTTCAGAGTTGAGTTTCCTTCGGTTGAGGACCTGCAGAGGTTGCTGAGTTTTGGGATGTG
TAATGTACCGGGAACTGATGGCATCCTTGAGTTCCACGAATGGAAGCTGGTGGAGCCTCAGGGTGCGCCGCTTACTCAGG
CGTGGTTGCGTTTTTTCGGGGCCCCATCCAAGCCTTTGCAGGATGCTCGCGTTGTGGCCAGCTTGGGTATTTTGATT-GG
GAAGCCTGAGCGTGTGCATATGGCGTTCACCAGAGCTCATGGGATTGCTCGGGTTTTGGTTAGTATTCTGAACGTTGAGT
ATGTGCCGGAAGTGGTTAAGTGGGCTTACCAAGGCAGGATCTATGATTTGGTTATTGAGTTTGAGGATGAGAGCCTTTTG
GTTGCGGCGCCTCACGGGTCCGATGTGGATATGCACGAGGGTGACGGCAGCGCAGGAGCGAGGGAGCCGCCGGTCGAGGA
TTCTGGACGACAGATGTCCAAGGGACCGGGGCCCGACATTGC
>chr3D_2899
ACTTAT--------------------------------------------------------------------------
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-----------------------------------------------------------GATGTATGGCGTTTACTGTGC
TGAGCTCACGTTTTTTGAGTCTCCGTATGAGCGAGAGGTTACTGATGAGACCCCGAGCATGACTACGGGGATTGTTAAGG
TCGCCAGAGGGGAGGGCTCTGAGATGCAGATCGTGCAGAGGCTTCGGGAGCTTGTCCCTGGGGACTTCCAGTGGGACCTC
GTCAGTCTCGATGATAAGATGTTCAGAGTTGAGTTTCCTTCGGTTGAGGACCTGCAGAGGTTGCTGAGTTTTGGGATGTG
TAATGTACCGGGAACTGATGGCATCCTTGAGTTCCAGGAGTGGAAGCTGGTGGAGCCTCAGGGTGCGCCGCTTACTCAGG
CGTGGTTGCGTTTTTCCGGGGCCCCATCCAAGCCTTTGCAGGATGCTCGCATTGTGGCCATCTTGGGTATTTTGATTGGG
-AAGCCTGAGCGAGTGGATATGGCATTCACCAGAGCTCATGGGATTGCTCGGGTTCTGGTTAGTATTCTGAACGTTGAGT
ATGTGCCGGAAGTGGTTAAGTGGGCTTATCGAGGCAGGATCTATGATTTGGTTATTGAGTTTGAGGATGAGAGCCTTTTG
GTTGCGGCGACTCACGGGTCCGATGTGGATATGCACGAGGGTGACGGCAGCGCAGGAGCGAGGGAGCCGCCGGTCGAGGA
TTCTGGACGACAGATGTCCAAGGGACCGGGGCCCGACACTGC
>chr3D_2899
ACTTAT--------------------------------------------------------------------------
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-----------------------------------------------------------GATGTATGGTGTTTACTGTGC
TGAGCTCACGTTTTTTGAGTCTCCATATGAGCGAGAGGTTGCTGATGAGTCACGGAACATGGCTACGGGGATTGTTAAGG
TCGCCAGAGGGGAGGTCTCTGAGACGCAGATCGTGCAGAGGCTTCGGGAGCTTGTCCCTGGGGACTTCCAGTGGGACCTC
GTCAGTCTCGATGATAAGATGTTCAGAGTTGAGTTTCCCTCGGTTGAGGACCTGCAGAGGTTGCTGAGTTTTGGGATGTG
TAATGTTCCGGGAACTGATGGCATCCTTGAGTTCCACGAATGGAAGCTGGTGGAGCCTCAGGGTGCGCCGCTTACTCAGG
CGTGGTTGCGTTTTTCCGGGGCCCCATCCAAGCCTTTGCAGGATGCTCGCGTTGTGGCCAGCTTGGGTATTTTGATTGGG
-AAGCCTGAGCGAGTGGATATGGCGTTCACGAGAGCTCATGGGATTGCTCGGGTTTTGGTTAGTATTCTGAACGTTGAGT
ATGTGCCGGAGGTGGTTAAGTGGGCTTACCAAGGCAGGATCTATGATTTGGTTATTGGGTTTGAGGATGAGAGCCTTTTG
GTTGCGGCGACTCACGGGTCCGATGTGGATATGCACGAGGGTGACGGCAGCGCAGGAGCGAGGGAGCCGCCGGTCGAGGA
GTCTGGACGACAGATGTCCAAGGGACCGGGGCCCGACACTGC
>chr7D_2899
ACTTAT--------------------------------------------------------------------------
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-----------------------------------------------------------GATGTATGGCGTTTACTGTGC
TGAGCTCATGTTTTTTGAGTCTCCGTATGAGCGAGAGGTTACTGATGAGACCCCGAGCATGACTACGGGGATTGTTAAGG
TCACCAGAGGGGAGGTCTCTGAGACGCAGATCGTGCAGAGGCTTCGGGAGCTTGTCCCTGGGGACTTCCAGTGGGACCTC
GTCAGTCTCGATGATAAGATGTTCAGAGTTGAGTTTCCTTCGGTTGAGGACCTGCAGAGGTTGCTGAGTTTTGGGATGTG
TAATGTACCGGGAACTGATGGCATCCTTGAGTTCCACGAGTGGAAGCTGGTGGAGCCTCAGGGTGCGCCGCTTACCCAGG
CGTGGTTGCGTTTTTCCGGGGCCCCATCCAAGCCTTTGCAGGATGCTCGCGTTGTGGCCAGCTTGGGTATTTTGATTGGG
-AAGCCTGAGCGAGTGGATATGGCGTTCACCAGAGCTCACGGGATTGCTCGGGTTCTGGTTAGTATTATGAACGTTGAGT
ATGTGCCGGAAGTGGTTAAGTGGGCTTATCGAGGCAGGATCTATGATTTGGTTATTGAGTTTGAGGATGAGAGCCTTTTG
GTTGCGGCGACTCACGGATCCGATGTGGATATGCACGAGGGTGACGGCAGCGCAGGAGCGAGGGAGCCGCCGGTCGAGGA
CTCTGGACGACAGATGTCCAAGGGACCGGGGCCCGACACTGC
>chr5D_2899
ACTTAT--------------------------------------------------------------------------
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-----------------------------------------------------------GATGTATGGTGTTTACTGTGC
TGAGCTCACGTTTTTTGAGTCTCCGTCTGAGCGAGAGGTTACTGATGAGACCCCGAACATGACTACGGGGATTGTTAAGG
TCGCCAGAGGGGAGGTCTCTGAGACGTAGATCGTGCTGAGGCTTCGGGAGCTTGTCCCTGGGGACTTCCAGTGGGACCTC
GTCAGTCTCGATGATAAGATGTTTAGAGTTGAGTTTCCTTCGGTTGAGGACCTGCAGAGGTTGCTGAGTTTTGGGATGTG
TAATGTACCGGGAACTGATGGCATCCTTGAGTTCCACGAATGGAAGCTGGTGGAGCCTCAGGGTGCGCCGCTTACTTAGG
CGTGGTTGCGTTTTTCCGGGGCCCCATCCAAGCCTTTGCAGGATGCTCGCGTTGTGGCCAGCTTGGGTATTTTGATTGGG
-AAGCCTGAGCGTGTGGATATGGCGTTCACCAGAGCTCATGGGATTGCTCGGGTTTTGGTTAGTATTCTGAACGTTGAGT
ATGTGCCGGAAGTGGTTAAGTGGGCTTACCAAGGCAGGATCTATGATTTGGTTATTGAGTTTGAGGATGAGAGCCTTTTG
GTTGCGGCGCCTCACGGGTCCGATGTGGATATGCACGAGGATGACGGCAGCGCAGGAGCGAGGGAGCCGCCGGTCGAAGA
TTCTGGACGACAGATGTCCAAGGGACCGGGGCCCGACACTGC
>SNPs
-SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------
---------------------------------------S--------------------S-------------------
------------------------------------S---------S-----S-------------------S-S-----
--------------------S-------S---------------------------------------------------
--S---------S-----S------------S--------SSSSSSSSSSSSSSSSSS----------------------
--------S----------S----------------------S------------------S------------------
-----------S---------S--S----------------S-----S------------------------------S-
S-------------------------------------------------------------------------------
------S----------------------------------------------------S--------------------
-----------------------S-----------------------------------------------------S--
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-----------------------------------------------------------------S------
--------------------------------------------------------------------------------
--------------------S-----------------------------------------SS----------------
--------------------------------------S--S-S----------S------------------S--S--S
---------S----------------------------------------------------------------------
---------------------------------------S-S--------------------------------------
----------------------SSSSS---------------------------------S-------------------
--------------------S-----------------S--------S-----SS-SS----------------------
--------------------------------------------------------------------------------
----------------SSS-S-------------------------------------S----S-------------SS-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------SSSSSSSS-----S--S----------------
----S--S----------------------S-----------S--S----------S---S-------SS----S-S---
-------S----SS--------SS--SSSSSS------S-S------------------S----------------S---
-----------------------------------------------------------------------S-S-----S
-------------SSS--SS-S---------------------------------------------S------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------------------------
-------------------S------------------------------------------------------------
---------------------------------------------------S----------------------------
-------S------------------------------------------------------------------------
----------------------------S---------------------------------------------------
-----------------------S----------S-------------------------------S-------------
-------S-----S---------S-----------------------S--------------------------------
------------------------------S---SSS-------------------------------------------
------------------S------------------------S------------------------------------
--------------------------------------------S---SSSSSSSSSSS---------------------
--------------------------------------------------S-------------S---------------
--------------------------------------------------------------------------------
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----------------------------------------------------------S---------------------
---------------------------------------------------S----------------------------
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------------S-----------------------------
>forward_33
-------------ACCTGTTACCCTAGCCCCAA-----------------------------------------------
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>reverse_1461
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--------------------GGATGTGCCGAGTTCTTGGA----------------------------------------
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------------------------------------------
>forward_213
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---------------------------------TAATCGTGACCGTGCTCGTT---------------------------
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>reverse_2424
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-----------------------GGACGGGGGTGTGTGTTAAT-------------------------------------
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>forward_1861
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-CGGGTCGCTGTTCAAGTGTA-----------------------------------------------------------
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>reverse_3585
--------------------------------------------------------------------------------
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----------------------------------------------------------------TCGGGGATTGTTAAGG
TCGC----------------------------------------------------------------------------
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------------------------------------------
