>input_sequence_47204
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---------------------ATGCGGATCCGCAGGGCCGCCTCCCTCCTGCTCGGCGTCACCCCCTCCGCCTCCTCCTC
CTCCCAGCCGCCCCGACCCAATCTGCCCCCGCTCCCATCAGCCGACGCCGGCGGCCCGCCGCCCTGCGTGACGAACATGG
CGGTAGCGGACCTGATGGACCAACTCGGCATCCAAGATCCCGAGGTAATTTTCCTGCCCCCACCCCCACGGTGCATGCTC
GTAGC--TTGCCGTATCC------TGCACCGATTGCA-CATTTCCGCGCCGCCGGCCGCCGGCCGCTGCACAGCAGCGTG
TGGATCCGCC----TCCCTCGCTGGATCTCCTCTGCCGAGGTTGCCCATCCGGCCGCTGCTGCTCGCCCGCGGGTCTGGC
TCGTCCGCGCAGACACGTCCCAGCT-------AGGGTTTCCATCCCTCCATGCCCAGCGCGCTTGCTTGTGTCTGGACGG
AATCATGTCCATGTCATGTTTCCTTGCTTGTTTCTAGAGGCAGTCGTCTTGTCCCTCCCGGTAATCTGTGGCCAGCC---
-GGCGGCGGCGTGTCTGCTAGGGTTGGAAGCGATGCGAGCAGTACCTACGCGTATCCACCCTATTTCGCTTACATATACC
AGTGT-GGTCG-AAATACATGTATTTTCCGATTTTTTTTTTGTTTTTTTCATAACATCCTCGCAAAGGATCAGGTTCCAC
AATCAAATGATAATGAAACAAAAACAAGGTGTAGCAGCATGAGCATCCAGGTGTAACTGGAAAAGAGTTCAGCTCCAGCA
CAATCCTGACAGCAAAGAG---AAAACAACATTAACTAAAGTTTTAACCTAACCACAGGGCTCCTAAACCTACATTTCGG
ACCAACATCCACAAACCCTTTCCCTGCTCTCATGTACTTCCTTCACAGCAG-CTCCGCAGAACTAAACATCATTTTTCAT
TATTGCATATTTATTTTCTTAAACAGGGGCTCATTTTCTGAATTTTC--ATTTTCATCTTTTTCAGGATGACAAGCACTT
CAAGGAGACTTACTTCGGGGATGGCCTTCCTAGCCTTCCCAGACACCACCCCTGGGGATCTAGGTGCCCTTTCCCAGCCA
CCACCTGTGCCGACTCCACTGAGGAAAATGAGGAGATGGCCGTTGACATGCTCGATTACATCATCTTGGAACCAGGTATC
GTGGAGAAGAACTCTGAGAAAAACAAGAGCACCACAACGAAGGGCGAGGAAGAGAAAAACAAGACCAAGTTGAAGACAAA
GGGGAAGGGGAAGGAGAAGGTGGAGGCAGATGAGAGTGATGATGCCGGAGGAGGGT----GGCCGTGCAAGAAGAACGAG
AGCGAAAGGTGGTTCTGCGGGCGGCCTGCGAGCCAGCCCAACTCGTACTGCTCGCACCACTCTGATCAAAAGCCTCGTAC
CATCTCGAAGCCACCTCAGAGGAAGAGGGTCATCGCCAACCAGGGCTTGGACCTAGGGTTCTGCTACTACGGCGGGTTCG
GCCTATCACGCAGCACCAAGAGGCACCACGGACCAAGCAGTGTGCAAGAACCTGTTGAACATAAAGAGCATACACCACT-
--AGATCACATTGATTTAAATGCAGGTCTAGCAGGAGCTGATGACATAGATCATCAAGTCGCGTAG--------------
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-------------------------------
>chr5D_1_TraesCS5D01G511600
TAAAATTTTGGAAAGATGATGTTTGTGTGTTATGAAGTTCATTTTTGAAGCCAGACTATGTGTGGGTTTATCAGTTCTTG
CCAAAATGGCAGCCAAGCAGGATATGATATAGTCATTTCAATCAAGAATCCTTGTGGCAGCCAAACATGATTTTTGCAAC
TGGATTTCCATTCCAACCAAATGAAATCCTCATGGAGATTATATTTCATTTCATTTCTATCAAATGAAATGAAATGAGGG
GTGCCAAATGAGTTGTTAATGGAACTGGAGTGAAAATCACCTTTTTTGCGAAAAGAAAAGCACTTTTGCTCTAAA-AAAT
ACACTGAACAAGTTATGGATGGTGACTACGATTGCGACAGTCGATGGACACCGTGGTGCCGTTCAATGCAGGTGGTAGTA
GAGGTCGGCATATGCAGATGCGGCGTATTACCTCCGTTCCAAATTACTTGTCTTAGATACGGGTCTAGATG---------
------------------ACAAGTAATTCGGGAAGGAACGAGTAATATCTGGTCTGGTGAGGACCGGTGATGGATCGTGG
TGCCAGGCCCCATGCAGTCTGGACGTGATCATCTGCGGGCGGCCGCCT-------------------ACGAGCGCGGTGA
GGATGCATTGTTGCAGCAGCACAATGCCTGCGTCGCCACTTATTAACAAGAATATTACTGATGCTTCGTGGCCAGGCATC
TCGTGGCGTACCCTGATTCTGATTTTGGATACGGTTTTTT---CAGTCAAAACAGGGGAGACGGGGAAGAGAAGGTGTGG
GTGTGGGCCATCAAACAACCAATC--ACAGCCGCTGAGCCTGCTGG--CACGGATGTTAGCAAGCCCTGTCCGCCA-CTC
TCAGCAAAAT------CGTCACTGACAAGTGGGCCCTCCTCCACCTCACACTGGTCTTCGCCTGTCCTGCCTTCGTCTCA
GTTAGTCCTGCCTCTTGCCCAAATCCCAAACCCTACCTCGCCAACGCTACCTCTCCAGATCCCGAGAGCTCCCCTCGCTC
TCCGTCCCTGCCGCGCCAGCCATGCGGATCCGCAGGGCCGCCTCCCTCCTGCTCGGCGTCACCCCCTCCGCCTCCTCCTC
CTCCCAGCCGCCCCGACCCAATCTGCCCCCGCTCCCATCAGCCGACGCCGGCGGCCCGCCGCCCTGCGTGACGAACATGG
CGGTAGCGGACCTGATGGACCAACTCGGCATCCAAGATCCCGAGGTAATTTTCCTGCCCCCACCCCCACGGTGCATGCTC
GTAGC--TTGCCGTATCC------TGCACCGATTGCA-CATTTCCGCGCCGCCGGCCGCCGGCCGCTGCACAGCAGCGTG
TGGATCCGCC----TCCCTCGCTGGATCTCCTCTGCCGAGGTTGCCCATCCGGCCGCTGCTGCTCGCCCGCGGGTCTGGC
TCGTCCGCGCAGACACGTCCCAGCT-------AGGGTTTCCATCCCTCCATGCCCAGCGCGCTTGCTTGTGTCTGGACGG
AATCATGTCCATGTCATGTTTCCTTGCTTGTTTCTAGAGGCAGTCGTCTTGTCCCTCCCGGTAATCTGTGGCCAGCC---
-GGCGGCGGCGTGTCTGCTAGGGTTGGAAGCGATGCGAGCAGTACCTACGCGTATCCACCCTATTTCGCTTACATATACC
AGTGT-GGTCG-AAATACATGTATTTTCCGATTTTTTTTTTGTTTTTTTCATAACATCCTCGCAAAGGATCAGGTTCCAC
AATCAAATGATAATGAAACAAAAACAAGGTGTAGCAGCATGAGCATCCAGGTGTAACTGGAAAAGAGTTCAGCTCCAGCA
CAATCCTGACAGCAAAGAG---AAAACAACATTAACTAAAGTTTTAACCTAACCACAGGGCTCCTAAACCTACATTTCGG
ACCAACATCCACAAACCCTTTCCCTGCTCTCATGTACTTCCTTCACAGCAG-CTCCGCAGAACTAAACATCATTTTTCAT
TATTGCATATTTATTTTCTTAAACAGGGGCTCATTTTCTGAATTTTC--ATTTTCATCTTTTTCAGGATGACAAGCACTT
CAAGGAGACTTACTTCGGGGATGGCCTTCCTAGCCTTCCCAGACACCACCCCTGGGGATCTAGGTGCCCTTTCCCAGCCA
CCACCTGTGCCGACTCCACTGAGGAAAATGAGGAGATGGCCGTTGACATGCTCGATTACATCATCTTGGAACCAGGTATC
GTGGAGAAGAACTCTGAGAAAAACAAGAGCACCACAACGAAGGGCGAGGAAGAGAAAAACAAGACCAAGTTGAAGACAAA
GGGGAAGGGGAAGGAGAAGGTGGAGGCAGATGAGAGTGATGATGCCGGAGGAGGGT----GGCCGTGCAAGAAGAACGAG
AGCGAAAGGTGGTTCTGCGGGCGGCCTGCGAGCCAGCCCAACTCGTACTGCTCGCACCACTCTGATCAAAAGCCTCGTAC
CATCTCGAAGCCACCTCAGAGGAAGAGGGTCATCGCCAACCAGGGCTTGGACCTAGGGTTCTGCTACTACGGCGGGTTCG
GCCTATCACGCAGCACCAAGAGGCACCACGGACCAAGCAGTGTGCAAGAACCTGTTGAACATAAAGAGCATACACCACT-
--AGATCACATTGATTTAAATGCAGGTCTAGCAGGAGCTGATGACATAGATCATCAAGTCGCGTAGGCGTCAGAATGCTT
CGATGAGCCTAGACACAACAACTGCATCAACGTTATTATCGATGGTTGCTATGTGGAAATCAGCGATGATGACGCACCTG
ACTACAATGGTGAAACCGTTAAGGTGAGCAAGACCCCATCAAAGAAGATGGGGAAGAAGCCCGTGAAAGCCCGGTCGCTC
AAGTCACTAATGTGATAAGAGCACGACCGTACTCGGGTCTCCGTGGCCCCTGTAAATAGAAATTTGGTACGTGCCTGCCT
CGGCTTAAGTACCAAGTGTATTGTTTACTATTTTTCTGCTCGAATACCGTACAAAC----AGAAACTATCTGGATATTTT
GTTGTACTGTTTTTTAACTGTGGT-TTGTGGTGCTAGCTTTCGCATTGGCCATTAAAAGAATTCCATCTAGTCCTATATA
AATTCTGATATATGGTGTTTGGTCATCGTCATGAGAAAGATGCAATCATTTTTACCAGGGTTGGATTATTTATTTATTTG
TTGTGGTTGTTTTATGGAGTTGCGTATGCTGGGCATTCGATTCCCGAAAACCGATGACTGGACCCGTACCAAACCGGAAT
TATCAAATTTTGGGTATTTCAATTTTCGGTCTTCGGGTTGGTCTCGCTTTATGTGTTGTTCGGTCTTCGGGTTGGTCTCG
CTTTATGTGTTGTTCGGTCTTCGGGTGGTAGTTCATTTTTTAATCAACAAAAATTGAAGTTCCGTAAGGTTGGTCATAAT
GGGAGTAACTTAGCCAGGAACATAAAATTCCCCAAGGCAAGTTTGCTATGTGGCAACTGTTAATGAGGAGAGAGGTGTTT
GTGGTAACATAGTATGTTACCATCACATAGCACTTTCTAAAACAAAATGGGCCTACAAGCTAATAAATTCAACCACCTAT
GATACTTCCCATTATAAAGGTATTAATATAGACTAGTGTTATATGCATGACGCCTGTGTAAGTTATTCCCCACTATGACT
AGCCTACTACCACAAACTGCATGTTTGGCAC
>chr4A_1
TAAATTTTTGGAAAGATGATGTTTGTGTGTTATGAAGTTCCTTTTTGAAGCCAGACTATGTGTGGGTTTATCAGTTCTTG
CCAAAATGGCAGCCAAGCAGGATAT-----AGTCATTTCAATCAAGAGTCCTCGTGGCAGCCAAACATGATTTTTGCAAC
TGGATTTCCATTCCAACCAAAAGAAATCCTCATGGAGATTATATTTCATTTCATTTATATCAAATGAAATGAAATGAGGG
GTGCCAAACGAGCTGTTAATGAAATTCGGGTGAAAATCACCTCTTTTGCGAAAAGAAAAGCACTTTTGCTTTAGAGAAAT
ACACTAAATGAGTTATTGATGGTGACTAGGATTGCGACAGTCGGTGGACAACGCGGTGTCGTTCAGTGCAGGTGGTAGTA
GAGGTCGGCATATGCAGATGCTACGTATTATCTATGTTCCAAATTACTTGTCTTA-ATACGGGTCTAAACACATTCGTAT
TGAGACAAATCTAAAAAAACAAGTAATTCGGGACGGAAGGAGTAG-ATGTAGTCTCGTCAGGACCGTTGATGGATCGTAA
TGCCAG-CCCCAGGCAGTCTGGACGTGATCGTCTGCGGGCGGCCGCCTACGCGCTGCCTTCAGCACCACGACCGCGGTGA
GGATGCGCTGTTGCAGCAGCACAAGGCCTGCGTCGCCACTTATTAACAAGAATATTAAGGATGCTTCGTCGCCAGGCATC
TCGTCGCGTACCCTGATTCTGATTTTGGATACGGTTTTTT---CAGTCAGAACAGAGGAGACGGGGAAGAGAAGGTGTGG
GTGTGGGCCATCAAACAACCAAT--CACAGCCGCTAAGCCTGCTGGAGCACGGATGTGAGCAGGCCCTGTCCGCCA-CTC
TCAGCAAAGTCGCTGCCGTCACGGACAAGTGGGGCCTCGTCCACCTCACACTGGTCTTCGCGTGTCCTGCCTTCGTCTCA
GTTAGTCCTGCCTCTTGCCCAAATCCCAAACCCTACCTCGCCAGCGCCACC-ATCCAGATCCTGAGAGCTCCCCTCTTTC
TCCGTCCCTCCGGCGCCAGCCATGCGGATCCGCAGGGCCGCCTCCCTCCTGCTCGGCGTCGCCCCCTCCGCCTCCTCCTC
CTCCCAGCCGCCCCGACGCAATCTGCCCCCGCTCCCGCCAGCCGACGCCGGCGGCCCGCCGCCCTGCGTGACGAACATGG
CGGTAGCGGACCTGATGGACCAACTCGGCGTCCAAGATCCCGTGGTAATTTTCCTCCCCCCGCCCCCACGGTGCATGCTC
GTAGC--TTGCCGTATCCTGCTCCTGCACCGATTGCA-CATTTCCGCGCCGCCGGCCGCCGGCCGCTGCACAGCAGCGTG
TGGATCCGCC----TCCATCGCTGGATCTCCTCTGCCGAGGTTGCCCATCGGGCCGCTGGTACTCGCGCGCGGGTCTGGC
TCGTCCGCGCAGACACGTCCCAGCT-------AGGGTTTCCATCCCTCCACGCTTCGCGCGCTTGCTTGTGTCTGGACGG
AATCATGTCCATGTGATGTTTGCTTGCTTGTTTCTGGAGGCAGTCGTGTTGTCCCTCGCGGTAATCTGTGGTCA------
------------GTCTGCTAGGGTTGGAAGCGATGCGAGCAGTACCTACGCGCTTACACCCTATTTCACTTACATGTACC
TGTGTAGGTCG-AAATGCATGTATTTTCTGATTACTA-----TTTTTTGCATACCATCCTCACAAAGGATCAGGTTCCAA
AATCAAATGATAATGAAACTAAAACAAGGTGTAGCAGCATGAGCATCCAGGTGCAG--------GAGTTTATCTGCCGCA
CAATGCTAACAGCAAAGATT--AAAACAACATTAACAAAAGTTTTGACCTAACCACAGGGCACCTAAGCCTACATTTCAG
ACAAACATCCACAAACCCTTTGCCTGCTCTCATGTACTTCCTTCACAGCAG-TTCCGCAGAACTAAACATCACTTTTCAT
TATTGCATATTTATCTTCTTAAACAGGGGTTCATTTTCGGAATTTTC--ATTTTCAACTTTTTCAGGATGACAAGCACTT
CAAGGAGACTTACTTCTGGGATGGCCGTCCTAGCCTTCGCAGACACCACCCGTGGGGATCTAGGTGCCATTTCCCAGCCA
CCACCCGTGCCAACTCCATTGAGGAAAATGAGGAGATGGCCGTTGACATGCTCGATAGCGTCATCTTGGAACCATGTATC
GTGGAGAAGAACTGTGAGAAAAGCAAGAGCACCACAACGAAGGGCGAGGAAGAGAAGAACAAGACCAAGTTGAAGACAAA
GGGGAAGGGGAAGGAGAAGGTGGAGGCAAATGAGAGTGACGATGCCGGTGGAGGAT----GGCCGTGCAAGAAGAACGAG
AGCGAAAGGTGGTTCTGCGGGAGGCCTGCGAGCCAGCCCAACTCGTACTGCTCGCACCACTCCGATCAAAAGCCTCGTGC
CATCTCGAAGCCACCTCAGAGGAAGAGGATCGTCGCCAACCGGGGCTTGGACTTAGGGTTCTGCTACTACGGCGGGTTTG
GCCCATCAAGCAGCACCAAGAGGCACCATGGATCAAGCAGCGTGCAAGAACCTGTTGAACAGAAAGAGCATACAACTCT-
--AGATCACATTGATTTAAATGCAAGTCTAGCTGGAGCTGATGATATAGAACATCAAGGCGCGTCGGCGTCAGAATGCTT
CGATGAGCCTAGGCACGACGACTGCACCGACGTCATTATCGATGGTTGGTATGTGGAAATCAGCGATGATGACGCACCTG
ACTACAACAGTGAAACCGTTAAGGTGAGCAAGACCCCGTCAAAGAAGATGGGGAAGAAGCCCGTGAAAGCCCGGTCGCTC
AAGTCACTAATGTGATACGAGCACGACCTTAGTCAGCTCTCTGTGGCCCGTGTAAAGAGAAATTTGGTACGTGCCTGCCT
CGGCTTAAGTACCAAGTGTATTGTTTACTAGTTTTCTGCTCGAATACCATACAATAGAGTAGAAACTATCTGGTTATTTT
GTTGTACTGTTTTTTAACTGTGGTATTGTGGTGCTAGCTTTCGTACTCTTTATTGAAAGAATTCCATGTAGTCCTATATA
AATTCTAC-ATATGGTGTTTGGTCGTCGTGATGGTCAAGATGCAATTATTTTTACTGGGGGTCGATTATTTATCCATTTG
TTGTGTTAGGTTTATGGAGGTGCGTAGGCTGGGCATTCGTTTCCTGAAAACCGATGACCGAGCCCGTACCGAACCGAAAT
GATCAAATTTTGGGTATTTCAATTTTCGGTCGTCGGG----------------------------------TTGGTCTCG
CTTCATGTGTTGTTCGGTCTTTGGGTGGT---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr4A_677
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---TGGTGTACCCTGATTTTGGTTTTGGGTACGGCTTTTT---CAGACAGAAGAGGGGAGACGGGGAAGAGAAGGTGTGG
GTGTGGGCCATCGAACAACCAATCACACAGCCGCTAAGCCTGCTGGAGCACGGATGTGAGGCATGAGCAGGCAAGCCCTT
TCAGCAAAATCGGTGCCGTCACTAACAAGTGGGGCCTCGTCCACCTCACACTGGTCTTCGCGTGTCCTGCCATCGTCTCA
GTTAGTCCTGCCTCTTACCCAAATCGCAAACCCTACCTCGCCAGCGCCACC-ATCCAGATCCCAAGAGCTCCCCTCGTTC
TCCGTCCCTCCGGCGCCAGCCATGCGAATCCGCAGGGCCGCCTCCCTCCTGCTCGGCGTCGCCCCCTCCGCCTCCTCCTC
CTCCCAGCCGCCTCGACCCAATCTGCCCCCGCTCCCGCCAGCCGACGCCGGCGGCCCGCCGCCCTGCGTGACGAACATGG
CGGTAGCGGACCTGATGGACCAACTCGGCATCCAAGATCCCGAGGTAATTTTCTTGCCCCACT-----CGATGCATGCTC
GTAGC--TTGCCGTATCCTGCATCTTGGATGTATTGCCCATTTCCGCGCCGCCGGCCGCCGGTCCCTGTACAGCAGCGTG
C-GATCCCCC----TCCCTTGCTAGATCTCCTCTGCCGAGGTTGCCCGTCTGGCCGCTGCTGCTCGCGCGCGGGTCTGGC
TCGTCCGCCCGGACACGTCCCTGCTGGCTGCTAGGGTTTCCATCCCTCCGCGCGCC------------------------
-------------TCGCGTTTGCTTGCTTGTTTCTGCAGGC----------------GCGGTAATCTGCGACCAGCCAGC
CAGCGGCGGCGTGCCTGCAAGGGTTGGAAACGATGCGAGCCGTACCTACGTGCATCCACTCCATTTCACTTACATGTACA
TGTGTCGGTCGAAAATGCATGTATTTTCTGATTTTTGC----TTTTTTTCATACCATCCTCACAAAGGATCAGGTTCCAC
AATCTAACGATAATGAAACAAAACCAAGGTGCAGCAGCATGAGTATCCAAGTGCAACAAGAAAAGAGTTTAGCTGCCGCA
AAATGCTAACATCAAAGAT-AAAAAACAACAGTAACAAAAGTTTTGACCTAACCACAGGGCACCTAAAGTTACAATTCAG
ATCAACCTCCACGAACACTTTGCCTGCTGTCATGTACTTCCTTCACTGCAG-CCCCCTATAACTCAGCATTATTTTTCAT
TATTGTATATCTCTTTTCTTGACCAGGGGCTCATTTTTTTGATTTTTCACTTTTCATGTTTTTCAGGATGACAAGCAATT
CAAGGAAACTTACTTCTGGGATGGCCTTCCTAGCCTTCCCAAACACCACCCCTGGGGATCTAGGTATCATTTCCCAGCCA
CCACTTGTGCCGATTCCATTGAGGAAAAAGAGGAGATGGCCGTTGACATGCTCGATGACATCATCTTGGAACCGCGTGTC
GTGGAGAAGAACTCTGAGAAAAACAAGAGCACCACAACGAAGGGTGAGGAAGAGAAGAACAAGAGCAAGCCAGAGACA--
----AAAGGGAAGGGGGAGGTGGAGGCAGATGAGAGTGATGCTGCCAGAGGAGGATATATGGCCATGCAAGCAGAATGAA
AG------GCGGTTCTACGGGCGGCCCACAAGCCAGCCCAACTCGTACTGCTTGCAACACTCTCACCGGAAGCCCCTTGC
CATCTCGAAGCCACCTCATAGCAAGAGGATCACTGCCCACCGTGACTTGGGACTAGGGTTCTACTACTATGATGGGTTCA
GCCCGTCAGGCAACACCAAGAGGCAACGCGGATGAAGCAGTTTGCCAGAACCTATTGAACAGAAAGAGGAGGTGTCGCCT
GAACACCACGTCGATTTTAGTGCAGGTCTGGTTGGAGTTGCTGACGAAGAAAATCAATTCGTGTCGGAGTCAGAATACAT
TGACAAGGCTAGGTCCGACATCTACACTGATGTCATGATCGCTGGCTACGACGATGATAGCAGCGATGAAGACTCGCCTG
ACTACAATGGCGAAAACATTAAGGTGAGCAAGAACCCGTTGAAGAAGAGGGGTAAGAAGCCTTTGAAAGCCCGATCGCTC
AAGTCATTGATGTGATAAGAGCACGGTCGCACTTGTGTCTCTGTGGCC--------------------------------
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-------------------------------
>chr5B_677
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---TGGTGTACACTGATTTTGGTTTTGGGTATGTTTTTTT---CTGTCAGAACAGGGGACACGTGGAAGAGAAGGTGTGG
GTGTGGGCCATCAAACAACCAATC--ACAGCCGCTAAGCCTGCTGGAGGACGGATGTGAGCAAGCCCTGTCCGCCA-CTC
TCAGCAAAATCGCTGCCGTCGGTGACAAGTGGGGCCTCGTCCACCTCACACTGGTCTTCGCGTGTCCTGCCTTCGTCTCA
GTTAGTCCTGCCTCTTGCCCAAATCGCAAACCCTACCTCGCCAGCGCCACC-CTCCAGATCCGGAGAGCTCCCCTCGTTC
TCCGTCCCTCCGGCGCCAGCCATGCGGATCCGCAGGGCCGCCTCCCGCGTGCTCGGCGTCGCCCCCTCCGCCGCCTCCCC
CTCCCAGCCGCCCCGACCCAATCTGCCCCCGCTCCCGCCAGCCGACGCCGGCGGCCCGCCGCCCTGCGTGACGAACATGG
CGGTAGCGGACCTGATGAACCAACTCGGCATCCAAGATCCCGAGGTAATTTTCTTGCCCCACT-----CGATGCATGCTC
GTAGC--TTGCCGTATCCTGCATCTTGGATGTATTGCCCATTTCCGCGCCGCCGGTCGCCGGTCCCTGTACAGCAGCGTG
C-GATCCCCC----TCCCTTGCTAGATCTCGTTTTTCGAGGTTGCCCATCCGGCCGCTGCTGCTCGCGCGCTGGTCTGGC
TCGTCCGCCCGGACACGTCCCTGCT-------AGGGTTTCCATCCCTCCGCGCCCC------------------------
-------------TCGCGTTTGCTTGCTTGTTTATGCAGGC----------------GCGGTAATCTGCGGCCAGCCAGC
CGGCGGCGGCGTGCCTGCAAGGGTTGGAAACGATGTGAGCCGTACCTACGTGCATCCACCCTATTTCAGTTACATGTACA
TGTGTGCGTCG-AAATGCATGTATTTTCCGATTTTTGC----TTTTTTTCATACCATCCTCACAAAGGATCAGGTTCCAC
AATCTAACGATAATGAAACAAAACCAAGGTGCAGCAGCATGAGTATCCAAGTGCAACAAGAAAAGAGTTCAGCTGCCGCA
AAATGCTAACAGCAAAGAT-AAAGAACAACAGTAACAAAAGTTTTGACCTAACCAGAGGGCACCTAAACCTACAATTCAG
ATCAACCTCCACCAACACTTTGCCTGCTGTCATGTACTTCCTTCACTGCACCCCCCCTATAACTCAGCATTATTTTTCAT
TATTGTATATCTCTTTTCTTAACCAGGGGCTCATTTTT------TTTCACTTTTCATGTTTTTCAGGATGACAAGCACTT
CAAGGAAACTTACTTTTGGGATGGCCTTCCTAGCCTTCCCAAACACCACCCCTGGGGATCTAGGTATCATTTCCCAGCCA
CCACCTGTGCCGACTCCATTGAGGAAAAAGAGGAGATGGCCGTTGACGTGCTAGATGACATCATCTTGGAATCGCGTATC
GTGGAGAAGAACTCTGAGAAAAACAAAAGCACCATGACGAAGGGTGAGGAAGAGAAGGACAAGAGCAAGCTAGAGACA--
----AAAGGGAAGGGGAAGGTGGAGGCAGATGAGAGTTATGCTGCCAGAGGAGGAT----GGCCATGCAAGCAGAATGAA
AG------GCGATTCTGCGGGCGGACCGCAAGCCAACCCAACTCGTACTGCTTGCACCACTCTCACCAGAAGCCCCGTGC
CATCTCGAAGCCACCTC---GCAAGAGGATCACTGCCCACCGTGACTTGGGACTAGGGTTCTACTACTACGATGGGTTCG
GCCCGTCAGGCAACACCAAGAGGCAACGCGGATCAAGCAGTTTGCCAGAACCTATTGAACAGAAAGAGGAGGTGTCGCCT
GAACACCACGTCGATTTTAGTGCAGGTCTGGTTGGAGTTGCTGACGAAGAAAATCAAGTCGGGTCAGAGTCAGAATACAT
TGAAAAGCCTAGGTTCGACGATTGTACTGATGTCATGATCACTGGCTACGACGATGACAACAGTGATGAAGACTCGCCTG
ATTACAATAGCGAAAACATTAAGGTGAGCAAGAACCCGCCAAAGAAGAGGGGAAAGAAGCCTATGAAAGCCCGATCACTC
AAGTCATTGATGTGATAAGAGCACGGTCGCACTTGTGTCTCTGTGGC---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------
>chr5D_682
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TACCCTGATTTTGGTTTTGGGTATGTTTTTTTTTTCAGTCAGAACAGGGGACACGTGGAAGAGAAGGTGTGG
GTGTGGGCCATCAAACAACCAATC--ACAGCCGCTAAGCCTGCTGGAGCACGGATGTGAGCAAGCCCTGTCCGCCA-CTC
TCAGCAAAATCGATGTCGTCAGTGACAAGTGGGGCCTCGTCCACCTCACCCTGGTCTTCGCGTGTCCTGCCTTCGTCTCA
GTTAGTCCTGCCTCTTGCCCAAATCCCAAACCCTACCTCGCCAGCGCCACC-CTCCAGATCCCGAGAGCTCCCCTCGTTC
TCCGTCCCTCCGGCGCCAGACATGCGGATCCGCAGGGCCGCCTCCCGCCTGCTCGGCGTCGCCCCCTCCGCCGCCTCCTC
CTCCCAGCCGCCCCGACCCAATCTGCCTCCGCTCCGGCCAGCCGACGGCGGCGGCCCGCCGCCCTGCGTGACGAACATGG
CGGTAGCGGACCTGATGGACCAACTCGGCATCCAAGATCCCGAGGTAATTTTCTTGCCCCACT-----CGATGCATGCTC
GTAGCGCTTGCCGTATCCTGCATCTTGGATGTATTGCCCATTTCCGCGCCGCCGGCCGCCGGTCCCTGTACAGCAGCGTG
C-GACCCCCCTTGATCCCTTGCTAGATCTCCTCTGCCGAGGTTGCCTATCCGGCCGCTGCTACTCGCGCGCGGGTCTGGC
-CGTCCGCCCGGACACGTCCCTGCT-------AGGGTTTCCATCCCTCCGCGCCCC------------------------
-------------TCGCGTTTGCTTGCTTGTTTCTGCAGGC----------------GCGGTAATCTGCGGCCAGCCAGC
CGGCGGCGGCGTGCCTGCAAGGGTTGGAAACGATGCGAGCCGTACCTACGTGCATCCACCCTATTTCACTTACATGTACA
TGTGTGGATCG-AAATGCATGTATTTTCCGATTTTTGC----TTTTTTTCATACCATCCTCACAAAGGATCAGGTTCCAC
AATCTAACGATAATGAAACAAAACCAAGGTGCACCAGCATGAGTATCCAAATGCAACAAGAAAAGAGTTTAGCTGCCGCA
AAATGCTGACAGCAAAGACAAAAAAACAACAGTAACAAAAGTTTTGACCTAACCACAGGGCACCTAAACCTACAATTCAG
ATCAACCTCCACCAACACTTTGCCTGCTGTCATGTACTTCCTTCACTGCAG-CCCCCTATAACTCAGCATTATTTTTCAT
TATTGTATATCTCTTTTCTTGACGAGAGGCTCATTTTTTTAATTTTTCAATTTTCATGTTTTTCAGGATGACAAGCACTT
CAAGGAAACTTACTTCTGGGATGGCCTTCCTAGCCTTCCCAAACACCATCCCTGGGGATCTAGGTATCATTTCCCAGCCA
CCACCTGTGCCGACTCTATTGAGGAAAAAGAGGAGATGGCCGTTGACATGCTCGATGACATCATCTTGGAACCGCGTATC
GTGGAGAAGAACTCTGAGAAAAACAAGAGCACCACGACGAAGGGTGAGGAAGAGAAGAACAAGAGCAAGCAAGAGACA--
----AAAGGGAAGGGGAAGGTGGAGGCAGATGAGAGTGATGCTGCCAGAGGAGGAT----GGCCATGCAAGCAGAATGAA
AG------GCGGTTCTGCGGGCGGACCGCGAGCCAGCCCAACTCGTACTGCTTGCACCACTCTCACCAGAAGCCTCGTGC
CATCTTGAAGCCAGCTCATAGCAAGAGGATCACTGCCCACCGTGACTTGGGACTAGGGTTCTACTACTATGATGGGTTCG
GCCCGTCAGGCAACACCAAGAGGCAACGCGGATCAAGCAGTTTGCCAGAACCTATTGAACAGAAAGAGGAGGTGTCGCCT
GAACACCACGTCGATTTTAGTGCAGGTCTGGTTGGAGTTGCTGACGAAGAAAATCAAGTCGCGTCGGAGTCAGAATACAT
TGACAAGGCTAGGTCCGACGATTGCACTGATGTCACAATCGCTAGCTACGACGATGGCAGCAACGATGAAGACTCGCCTG
ACTACAATGGCGAAAACATTAAGGTGAGCAAGAACACATCGAAGAAGAGGGGGAAGAAGCCTTTGAAAGCCCGATCACTC
AAGTCATTGATGTGATAAGAGCACGGTCGCACTTGTGTCTCTGTGG----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------
>SNPs
----S-----------------------------------S---------------------------------------
-------------------------SSSSS-----------------S----S---------------------------
---------------------S----------------------------------S-----------------------
--------S---S--------S--S-S-S-------------S---------------------------S--S------
-----S--SS------S-----------S--------------S------S--S----S------S--------------
---------------------SS-------S--SS--------------------S-----------S-SS---------
---------------------------------S----S-----SS--S-S----S--S-------S-----------SS
------S-----S-----------------S----------------------------------------S--------
------SS----------------S--------------------------------SS----------S----------
-------------------------------------------------S------------------------------
-----------------------------------S---------------------S----------------------
---------------------------------S----S----------------------S------------------
-------------------------------------------S---S---S-------------------------S--
---------S-S------------------------------------------------S-------------------
------------------------------------SS------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------S----S------------------------
---------------------S-------------S-----------S---------S----------------------
----------------------------------------------------S--------------S-------S----
S---------------S-------------------SSSSSS-----------S-------S------------------
-----------------------------------------------------S---SS---------------S-S---
----S-------------S-----------------S--------S---------------S----------------S-
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
----------------S---------------------------------------------------S-----------
------------------S-------------------------------------S-----------------S-----
--------------------------------------------------------S-----------------------
------------------------------------------------------S-------------------------
------------------------------------------------------------------------------S-
----------------------------S------------S--------------------------------------
---S----S-----------------------S----------------------------S------------S-S---
--------------------------------S-----------------S-------------S---------------
------------S---S---------S-S----S----------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------S-------S------S-----------------------
------------------------------S-----------------S-----SS-----------------S------
-------------------------------------------S-S-SSSS---S------------S------------
------SSS---------------S----S---SSS----------S--------SS---S-S----------SS-----
-----S-S-S---------S------S------------S----S-------------S-SS--------S-----S---
S------------------------------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
---S-----------------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_107
--------------------------------------------------------------------------------
-------GGCAGCCAAGCAGGATATGA-----------------------------------------------------
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-------------------------------
>reverse_1886
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---------------------------------------------AACCTAACCACAGGGCTCCT---------------
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-------------------------------
>forward_435
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---------------AGATGCGGCGTATTACCTCC---------------------------------------------
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-------------------------------
>reverse_2479
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------------------------------------------------------------------------------AC
CATCTCGAAGCCACCTCA--------------------------------------------------------------
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-------------------------------
>forward_2297
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-------------------------------------CGAAGGGCGAGGAAGAGAAA-----------------------
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-------------------------------
>reverse_3334
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-----------------------------------------------------TGTTGTTCGGTCTTCGGGTT-------
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-------------------------------
