>input_sequence_47203
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----------------------------------------------------------------ATGAAGCTGAAAAACA
GTTTTAGGGAGGCCGATCCGATTGCCGTGCAGAGGGGCTATGGTT---------------TCAGGCCAAACCAACCAGCT
GTTGTTCATCAGGCAAGATGCAGATGGATCATTGGAGATGTGACCGAGGTGTTTGATCATAACACATGGAAGCTTGGCAA
GATTGCAAAGATTGTGAAGAACGATTACTTTGTCATCAGGCTCGCCGACTGCATCCAGTTGAAAGAGTTCCACATTTCTA
GCTTGAGGGTTCCACAACCACATGATGCTCCCACAGCTCCTCCTTATGGCAAGCAGTTCCCTGCAGCTGACAACAAGGTA
AGCAACATCCAG--TCAGTTCCTGGAGCATGTAAATGTGCTACTTTTCATCTCTGAAATGAGTCGCTTATTCGGCAGTTA
ATAGTTCATACTCTTTCATGATGTTT----CTGGTCACA-----TTATATATCCATTGTTGTTACTTAGAATTCCATCTT
GCTACTTACTACCCATGAAGCAACCATTGCATTGCTTGTTATTTCGGTACTCTAGGAATATGGTC-----TAGGCATCTT
CAGAAGTAGA-----AGGACTAGGCCGGCCTTAGACATGAGTTTTTTTAGCTTGGGCTGAAATAGCCATGCCCTAAAAGA
CTAGAAGGAAGGGAAAAGGTTTGCAGAGTTCAGTAGATAGTT----TCCTGGAAAATGCTTATATCAAGTCCACATGCTT
GATGGGCAATTTTGGAACTAGCACGGCTGAGATGGGATCAACTCAACTTGATTTCACTACTTTTGATGAGTAGTGGAGGT
GTTCCTGCGCATTGCTTCTCTGTTTTTCTCTGCAAATGTAGCTACCAAGCAGTTGAAGCAGTCACTGCTTTTAAGGAGGA
AAAATGTAGCTCGGTTGAAGTAATTCAACCTGTACCTAAGCTCTGAAGGAAGCAAATGCACACACTGACGATAGATACAA
CATGTTGGTTGGCACCACCATGAATGAATTGTACAAATTGCCACCAAATCTCATAATTTGTCCACTGCTGCATCAGACTT
CAGTCTGTAACTGAGGCGTCACACTTTCTTCCGGCTGTTCAACAGTTGTGCAATTTCTCAATCTTTTCTCACTGTTTATC
CATCTTCTGCAGGTGACCCGAAGGGGCAACCAGCTGCCTGCTGATGCGCTGAGAAGATCAGGCAAGAAGAGGAAATCGTC
CGAAGTTCTTGATTTCTCTCCTCAGCCAAGCCAGAGAAGGCTCTTCCAGGTGGCCAGGGAAGAGGCCGCCCCCGCGGAGT
GCTCGGTGGCGAGCTGCAGCGCCGCGAACGACGACG---------TCGGCGTCAGCAGTGGCCGGCACGGGGGCTGCTGC
TCCGTGGGGCGCGGCGACGCCCAGTCGCGCGTGGTGGCGGCCTCCCCGCGCGCCGCGTGGTCGTCGTCGGACTCGGACGG
CGCGCTGAGCGACGGCGGGCCGGCGGGCGTGG------ACGTGCACGAGCTGGAGCTGGAGGCGTACCGGTCGACGGTGC
GCGCGCTGCACGCGTCGGGGCCGCTGACGTGGGAGCAGGAGTCGCTGCTCACCAACCTCCGCCTCTCCCTCAACATCTCC
AACGAGGAGCACCTCCTCCAGCTCCGCCGCCTGCTCTCCTCCTGA-----------------------------------
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-------------------
>chr5D_1_TraesCS5D01G446200
CCGTTTAATTTCTGCATCTTGGTGAGATTGCCCGGCGAGGATCGGATGGATCCTCTGCAGTTCCCGATCCCAATCCGAGC
TGCCCGCTGCCCGTTTCCAGTTCGATGTAT-----CAATCTGTTCCTCTCCGGACTGCTCTTGTTGTTTCTGCAGGCAGC
-----CATTTCCCGGCCTTTGATGGCTTTGGATCGTCAATGCCCAATGGTTGAGTTTTCTTTTTCTCAGGCTGCAAGTGT
TCCCCAGTTCTGTGGATGGATTGCTCTTGTTTTCCACCTTTGATGTTTCTGCTTTGGCTTTTTTAGCTGGGAATCTCGAT
CAGGTATTGGGGGTAAAACGAGGACTGAATGAAACCAAGTCAAGTTGGTAACTGCTGAATGTTTCTTGTTGACGAAAACT
GATCCTTTTTCTGTCCTGATGATGACTTGGTTTGTTGGGTTTCCTTGCGCCGGAATTTTCTTTCGTTCTTGTGTATGTTC
TCTGTTGATCGATCTCGTGTGTTCCCGGTTCTGATGCGTCCATGGATACGCCAGTGGATCTGGATTGGGAGATCGATCGG
TT-ATCCTGGATGAGGTGTTTACTTCTCTTCTGTTTTCTTTTGTTGTGTTGAAGGTATCCAATTTGGTTCTGTTCCTACG
TTGATGAAACTTGTGAATTTGAGCAGCTCTTTTTGTTCTGAGCTCCTACAGGGAGATGGATCTGAATTGGTGTTGACTCT
GTCTCAATCA--AGTTTAACTGCATGCACATCTACACATACAATCAGAATTCTTTTTCCGTAGATCATTAGTGATTG-TT
CCCATGCCGAAATTGATTGGCACTGGACTAGCCCTC---TTTTGCTATGA-CATATTCAGATATCTGCATATGATCAATC
ACAATTATCCTGTTTTTCCGCTG-GACCCATTAAGGAAGAACACGATTAGATTAG-ATTTATGTCCTTTCTTT-TAAGTG
CTGCTCTGCTGGTGCATATCTTGACCTTGTTACTA---CCTCCACATTGTGCAGGAGTAGAATCATGAAGCTGAAAAACA
GTTTTAGGGAGGCCGATCCGATTGCCGTGCAGAGGGGCTATGGTT---------------TCAGGCCAAACCAACCAGCT
GTTGTTCATCAGGCAAGATGCAGATGGATCATTGGAGATGTGACCGAGGTGTTTGATCATAACACATGGAAGCTTGGCAA
GATTGCAAAGATTGTGAAGAACGATTACTTTGTCATCAGGCTCGCCGACTGCATCCAGTTGAAAGAGTTCCACATTTCTA
GCTTGAGGGTTCCACAACCACATGATGCTCCCACAGCTCCTCCTTATGGCAAGCAGTTCCCTGCAGCTGACAACAAGGTA
AGCAACATCCAG--TCAGTTCCTGGAGCATGTAAATGTGCTACTTTTCATCTCTGAAATGAGTCGCTTATTCGGCAGTTA
ATAGTTCATACTCTTTCATGATGTTT----CTGGTCACA-----TTATATATCCATTGTTGTTACTTAGAATTCCATCTT
GCTACTTACTACCCATGAAGCAACCATTGCATTGCTTGTTATTTCGGTACTCTAGGAATATGGTC-----TAGGCATCTT
CAGAAGTAGA-----AGGACTAGGCCGGCCTTAGACATGAGTTTTTTTAGCTTGGGCTGAAATAGCCATGCCCTAAAAGA
CTAGAAGGAAGGGAAAAGGTTTGCAGAGTTCAGTAGATAGTT----TCCTGGAAAATGCTTATATCAAGTCCACATGCTT
GATGGGCAATTTTGGAACTAGCACGGCTGAGATGGGATCAACTCAACTTGATTTCACTACTTTTGATGAGTAGTGGAGGT
GTTCCTGCGCATTGCTTCTCTGTTTTTCTCTGCAAATGTAGCTACCAAGCAGTTGAAGCAGTCACTGCTTTTAAGGAGGA
AAAATGTAGCTCGGTTGAAGTAATTCAACCTGTACCTAAGCTCTGAAGGAAGCAAATGCACACACTGACGATAGATACAA
CATGTTGGTTGGCACCACCATGAATGAATTGTACAAATTGCCACCAAATCTCATAATTTGTCCACTGCTGCATCAGACTT
CAGTCTGTAACTGAGGCGTCACACTTTCTTCCGGCTGTTCAACAGTTGTGCAATTTCTCAATCTTTTCTCACTGTTTATC
CATCTTCTGCAGGTGACCCGAAGGGGCAACCAGCTGCCTGCTGATGCGCTGAGAAGATCAGGCAAGAAGAGGAAATCGTC
CGAAGTTCTTGATTTCTCTCCTCAGCCAAGCCAGAGAAGGCTCTTCCAGGTGGCCAGGGAAGAGGCCGCCCCCGCGGAGT
GCTCGGTGGCGAGCTGCAGCGCCGCGAACGACGACG---------TCGGCGTCAGCAGTGGCCGGCACGGGGGCTGCTGC
TCCGTGGGGCGCGGCGACGCCCAGTCGCGCGTGGTGGCGGCCTCCCCGCGCGCCGCGTGGTCGTCGTCGGACTCGGACGG
CGCGCTGAGCGACGGCGGGCCGGCGGGCGTGG------ACGTGCACGAGCTGGAGCTGGAGGCGTACCGGTCGACGGTGC
GCGCGCTGCACGCGTCGGGGCCGCTGACGTGGGAGCAGGAGTCGCTGCTCACCAACCTCCGCCTCTCCCTCAACATCTCC
AACGAGGAGCACCTCCTCCAGCTCCGCCGCCTGCTCTCCTCCTGAGCCCGATCCTCGT----------------CGCCGG
CCCACCGCCGGCTCGCCGACGGCTTAATCATCACTCATCGAGGCGACTCCGGTCCAGTCCAGTCCTGACAGACGAACACC
GCAGGGCGCTGCGAAATAACGGAGGCCGATGTGCCGTGGAGCTCTCTGTTTTTCC-TTTCGGCAAGAGAAGAATTTTGCT
TGTTCGTCCTGTGTAGTCGATGCAGCAGCAGCAGCAGCAGCTCCAGCTCCATTGCCGACGTAGAGAGAGCTCTGCGGGGT
ACGTCGTCGCCTTCCTC-------CAGTCCAGT----------AGCTTTGGGCCATTGACTCTCCTGAATTACTACAACT
AGTGCTGGCCTTGCCTTTTCTATATCTATGTAAATG----TAAATCCATCTCCTCACTGATCTGCTCCAAGATTATTG--
-CTACTTTTACTTCAAG--ACA--------GTAAATTTCTCCGGGGATCAACTTTTGTTACTCTCTGAAGGTGATAAGCT
TGGAGTCGACCGACCGGCCGACTAGCGCACCTGGCAGTACCGAAACTCGATCGTCCGGCCATGCGGGCACGTGTCTGCCT
CGCCCCGGCACGCGGCGCGCGGGCCACGTGCCATGGCGCGCTCCGCGCGTCTCCTCGCCGAACGCGTGTCGACGTGAAGG
CCGTTAAAGTGCGTCGGCACTGCCGCTTGCCTCTGCT-------------CTGCTCCTGTGGTTGTCTTCTCGTGCGGTT
GCGCACTGGCTTTTGCTTTTGTAGACTCTGTATCGTCGACGAGCTCCGACCCTGGCTTAGCTCCGGGCAGCGGGTGATGA
TGTCGGTGAGCCTCGTGAGGGCGTCGCTGCCGGCTTGGTGCACGGCGGC---GGCCGCGGGGAGCAGCGGCCTGCGCTCT
CGCCTGCGCGGCATGGCGTGCTCCGGTCGGCGCGTGGGCGTCCGGTGCAGCGGCACGACACCGCCGGGGTTCCCTCCGGG
GCC---------------------------GACGCCGCCGGGGTTCCCCGCGGTGCCGTCGCCCGAGGAGGTGCCGGGCA
CGGCCCGCCCGCCAGAGGA
>chr5A_1
CCGTTTAATTTCTGCATCTTGATGGGATTGTCCGGCGAGGATCGGATGGATCCCCTGCACTTCCTGATCCCAATCCGAGC
TGCCCGCTGCCCGTTTCCAGTTCGATGTAC-----CAATCTGTTTCTCTCCGGACTGCTCTTGTTGTTTCTGCACGCAGC
-----CATTTCCCGGCCTTTGATGGCTTTGGATCGTCAATGCCCAATGTTT--GTGTTTTTTTCCACCGGCTGCAAGTGT
TCCG-AGTTCTGTGGATGGATTGCTCTTGGTTTCCACCTTGTTTTG---TGCTTCGTCTTTTTTAGCTGGGAATCCCGAT
CGAGTATT-GGGGTAAAACGAGAACTGAATGAAACCAAGTCAAGTTGGTAACTGCTGAATGTTTCTTGTTGACGAAAACT
GATCCTTTTTCTGTCCTGATGATGACTTGGTTTGTTGGGTTTCCTTGCGCCGGAATTTCCTTCCGTTCTTGTGTGTGTTC
TCTGTTGATCGATCTCGTGTGTTCCTGGTTCTGATGCGTCCATGAATATGCCAGTGGATCTGGATTGGGAGATCGATCGG
TTTAGCCTGGATTAGGTGTTTACTTCTGTTCTGTTTTT-----TTGTGTTAAAGGGGTCCAATTTGGTTCTGTTCCTACG
TTGATGAAACTTCTGAATTTGAGCAGCTGTTCATGTTCTGAGCTCCTACAGGGAGATGGATCTGAATTGGTGTTGACTCT
TTGTCCCAATTCAGTTTAACTACATGGACATGTACACATACAATCAGAATTT---TTCTGTAGATCATTGGTGATCCTTT
CCCATGCCGAAATTGATTGGCAGTGGACGACTAGTCAATTTTTGCTATGA-CATATTCAGATATTTGCATATGATCAATC
ACAATTATCCTGTTTTTTGGTTG-GATCCATTAAGGGAGAACAAGATTATATTAT-ATTTATGTCCTTTCTTT-TCAGTG
CTGCTCTGCCGGTGCATATCTTGACCTTGTTACTA---CCTCC-CATTGTGCAGGAGTAGAATCATGAAGCTGAAAAACA
GTTTTAGGGAGGCCGATCCGGTCACGGTGCAGAGGGGCTATGGTT---------------TCAGGCCAAACCAACCAGCT
GTTGTTCATCAGACAAGATGCAGATGGATCATTGGAGATGTGACCGAGGTGTTTGATCATAACACATGGAAGCTTGGCAA
GATTGCAAAGATTGTGAAGAATGATTACTTTGTCATCAGGCTCGCCGACTGCATCCAGTTGAAAGAGTTCCACATTTCTA
GCTTGAGGGTTCCACAACCACAAGATGCTCCCACAGCTCCTCCTTATGGCAAGCAGTTCCCTGCAGCTGATAACAAGGTA
AGCAACATCCAG--TTAGTTCCTGCAGCATGTAAATGTGGTACTTTTCATCTCTGAAATGAGTCGCTTATTCGACAGTTA
ATAGTTCATACTCTTTCATGATGTTT----CTGGTCACA-----TTATATATCCATTGTTGTTACTTAGAATTCTTTCTT
GCTACTTACTACCCATGAAGC-----------TGCTTGTTATTTCGGTACTCTAGGAATATGGTCACTGCTAGGCACCTT
TAGAAGTAGAAGGGGAGGACTAGACCGGCCGTAGACATGAGTTTTTTTAGCTTGTGCTGAAATAGCCATGCCCTAAAAGA
CTGGAAGGAAGGGAAAAGGTTTGCAGAGTTCAGTACTTTAATCAAGTCCTGGAAAATGCTTATATCAAGTCCACATGCTT
GATGGGCAATTTT-GAACTAGCACGGCTGAGATGGGATCAACTCAGCTTGATTTCACTACTTTTGATGAGTAGTGGAGGT
GTTCCTGCGCATTGCTTTTCTGTTTTTCTCTGCAAATGTAGCTACCAAGCAGTTGAAGCATTTGCTGCTTTTAAGGAGGA
AAAATGTAGCTCAGTTGAAGTAATTCAACCTGTACCTAAGCTCTGAAGGAAGCAAACGCACACACTGACGATAGATACAA
TATGTTGGTCGGCACCACCATGAATGAATTGTACAAATTGCCACCAAATCTCATAATTTGTCCACTGC-----CAGACTT
CTGTCTGTAACTGAGGCGTCACACTTTCTTCCGACTGTTCAACAGTTGTGCAATTTCTCAAACTTTTCTCACTGTTTATC
CATCTTCTCCAGGTGACCCGAAGGGGCAAGCAGCTGCCTGCTGATGTGCTGAGAAGATCAGGCAAGAAGAGGAAATCGTC
CGAAGTTCTTGATTTCTCTCCTCAGCCAAGCCAGAGGAGACTCTTCCAGGTGGCCAGGGAAGAGGCCGCCGCCGCGGAGT
GCTCGGTGGCGAGCTGCAGCTCCGCGAACGACGACGCTGGCGGCGTCGGCGTCGGCAGCGGCCGGCACGGGGGCTGCTGC
TCCGTGGGGCGCGGCGACGCCCAGTCGCGCGTGGTGGCCGCCTCCCCGCGCGCCGCGTGGTCGTCGTCGGACTCGGACGG
CGCGCTGAGCGACGGCGGGCCGGCGGGCGTGG------ACGTGCACGAGCTGGAGCTGGAGGCGTACCGGTCGACGGTGC
GCGCGCTGCACGCGTCCGGGCCGCTGACGTGGGAGCAGGAGTCGCTGCTCACCAACCTGCGCCTCTCCCTCAACATCTCC
AACGAGGAGCACCTCCTCCAGCTCCGCCGCCTGCTCTCCTCCTGAGTCCGATCCTCGT----------------C-----
------------TCGCCGACGGCTTAATCATCACTCATCGAGGTGACTCCGGTCCGGTCCAGTCCAGACAGACGAACACC
GCATGGCGCTGCGAAATAATGGAGGCCGATGTGCCGTGGAGCTCTCTGTTTTTTCCTTTCGGCAAGAGAAGAATTTTGTT
CGTTCGTCTTGTGTAGTCGAT---------GCAGCAGCAGCTCCAGCTCCATTGCCGACGTAGAGAGAGCTCTGCAGCGC
ACGTCGTCGCCTTCCTCAAGACTCCAGTCCAGT----------AGCGTTGGGCCATTGACTCTCCTGAATTACTACAACT
AGTGCTGGCCTTGCCTTTTCTAT--CTATGTAAATG----TAAATCCATCTACTCACTGATCTGCTCCAAGATTATTACT
ATTACTTTTACTTCAAGATC---------------ATTCTCCGGGGATCAATTTTTATCACTCTCTAAAAGTGATAAGCT
TGGAGTCGACCGACC----------------AGGCAGTACCGAAACTCGATCGTCCGGCCATGCGGGCACGTGTCCGCCT
CGTCCCGGCACGCGGCGCGCGGGCCACGTGCCATGGCGCGCGCCGCGCGTCTCCTCGCCGAACGCGTGTCGACGTGAAGG
CCGTTAAAGTGCGTCGGCACTGCCGCTTGCCTCTGCT-------------C------CGTGGTTCTCTCCTTGCGCAGTT
GCGCACCCGCTTTTGCTTTTGTAGACT--GTATCATCGACCT----------TGGCTTAGCTCCGGGCAGCAGGTGATGA
TGTCGGTGAGCCTCGCGAGGGCGTCGCTGCCGGCCTGGTGCACGGCGGCCGCGGCCGCGGGGAGCAGCGGCCTGCGCTCT
CGCCTGCGCGGCACGGCGTGCTCCGGTCGGCGCGTGGGCGTCCGGTGCAGCTCCACCACGCCGCCGGGGTTTCCTCCGGG
GCC---------------------------GACGCCGCCGGGGTTCCCCGCGGTGCCGTCGCCCGAGGAGGTGCCGGCCA
CGGCCCAGCCGCCCGAGGA
>chr5B_3
--GTTTAATTTCTGCATCTTGATGAGATTGTCCGGCGAGGATCGGATGGATCCTCTGCACTTCCTGATCCCAATCCGAGC
TGCCCGCTGCCCGTTTCCAGTTCGATGTATCATATCAATCTGTTTCTCTCCCGACTGCTCTTGTTGTTTCTGCAGGCAGC
CATTTCATTTCCCGGCCTTTGATGGCTTTGGATCGTCAATGCCCAATGGTTCAGTTTTTCTTTTCACGGGCTGCAAGTGT
TCCCCAGTTCTGTGGATGGATTGCTCTTGTTTT------------G---TGCTCTGTCTTTTTTAGCTGGGAATCTCGAT
CGAGTATTGGGGGTAAAACGAGGACTGAATGAAACCAAGTCAAGTTGGTAACTGCTGAATGTTTCTTGTTGACGAAAACT
GATCCTTTCTCTGTCCTGATGACGACTTGGTTTGTTGGGTTTCCTTGCGCCAGAATTTTCGTTCGTCCTTGTGCGTGATT
TCTGTTAATCGATCTCCTGTGTTCCTGGTTCTTACGCCCGT-------------TGGATCTGGAATTAGA----GATCGG
TTTATCCTGCACGACATGTTTACTTCTGTTCTGCATC-------TGTGTTAAAGGTGTCCAATTTCCTTGTTTTCCAACG
TTGATGAAACTTCTGAATTTGAGCAGCTCTTCTTGTTCTCAACTCCTACAGAGAGATGGATCTAAATTGGTGTTGACTAT
TTGTGTCAATTCAGTTTAACTGCATGCACATATGCACATACAATCAGAATTC---TTTTGTAGATCATTAGTGATCGTTT
CCCATGCCGAAATTGATTGGCAGTAGACTAGTCCTC---TTATGCTACAGCCATATTCAGATATTTGCATATCATCAATC
ACAATCATCCTGTTTTTTCGTTG-GATCCAATAAGGGAGAACAAGATTAGATCAT-ATTTATGTCTTTTCGTTCTAACTG
CTGCTTTGCTGGTGCATATCTTGACCTTGTTGTTACTTCCTCC-CATTGTGCAGGAGTAGAATCATGAAGCTGAAAAACA
GTTTTAGGGAGGCCGATCCGATCACGGTGCAGAGGGACTATGGTT---------------TCAGGCCAAACCAACCAGCT
GTTGTTCATCAGACAAGATGCAGATGGATCATTGGAGATGTGACCGAGGTGTTTGATCATAACACATGGAAGCTTGGCAA
GATTGCAAAGATTGTGAAGAATGATTACTTTGTCATCAGGCTCGCCGACTGCATCCAGTTGAAAGAGTTCCACATTTCTA
GCTTGAGGGTTCCACAACCACATGATGCTCCCACAGCTCCTCCTTATGGCAAGCAGTTCCCTGCAGCTGACAACAAGGTA
AGCAACATCCAG--TTAGTTCCTGGAGCATGTAAATGTGCTACTTTTCATCTCTGAAATGAGTCGCTTATTCGACAGTTA
ATAGTTCATACTCTTTCATGATGTTTGTTTCTGGTCACATTATTTTATATATCCATTGTTGTTACTTAGAATTCTTTCTT
GCTACTTACTACCCATGAAGCAACCATT-CATTGCTTGTTATTTCGGTACTCTAGGAATATGGTC-----TAGGCATCTT
TGGAAGTAGAAGGGGAGGACTAGGCCGGCCGTAGACATGAGTTTTTTTAGCTTGGGCTGAAATAGCCATGCCCTAAAAGA
CTAGAAGGAAGGGAAAAGGTTTGCAGAGTTCAGTAGATAGTT----TCCTGGGAAATGCTTATATCAAGTCCACATGCTT
GATGGGCAATTCTGGAACTAGCACGGCTGAGATGGGATCAACTCACCTTGATTTCGCTACTTTTGATGAGTAGTGGAGGT
GTTCCTGCGCATTGCTTCTCTGTTCTCCTCTGTAAATGTAGCTACCAAGCAGTTGCAGCAGTCACTGCTTTTAAGGAGG-
AAAATGTAGCTCAGTTGAAGTAATTCAACCTGTAC----GCTCTGAACGAAGCAAATGCACACACTGACGATAAATACAA
CATGCTGGTTGGCACCACCATGAATGAATTGTACAAATTGCCACAAAATCTCATAATTTGTCCACTGC-----TAGGCTT
CAGTCTGTAACTGAGGCGTTACACTTTCTTCCGACTGTTCAACAGTTGTGTAATTTCTCAAACTTTTCTCACTGTTTATC
CATCTTCTCCAGGTGACCCGAAGGGGCAAGCAGCTGCCTGCTGATGTGCTCAGAAGATCAGGCAAGAAGAGGAAATCGTC
CGAAGTTCTTGATTTTTCTCCGCAGCCAAGCCAGAGAAGACTCTTCCAGGTGGCCAGGGAAGAGGCCGCCGCCGCGGAGT
GCTCGGTGGCGAGCTGCAGCGCCGCGAACGACGACG---------TCGGCGTCAGCAGCGGCCGGCGCGGGGGCTGCTGC
TCCGTGGGGCGCGGCGACGCCCAGTCGCGCGTGGTGGCCGCCTCCCCGCGCGCCGCGTGGTCGTCGTCGGACTCGGACGG
CGCGCTGAGCGACGGCGGGCCGGCGGGCGTGGGCGTGGACGTGCACGAACTGGAGCTGGAGGCGTACCGGTCGACGGTGC
GCGCGCTGCACGCGTCGGGGCCGCTGACGTGGGAGCAGGAGTCGCTGCTCACCAACCTGCGCCTCTCCCTCAACATCTCC
AACGAGGAGCACCTCCTCCAGCTCCGCCGCCTGCTCTCCTCCTGAGCCCGATCCTCGTCGCCGGCCACCGCTGGC-----
------------TCGCCGACGGCTTAATCATCACTCATCGAGGCGACTCCG-----GTCCAGTCCAGACAGACGAACACC
GCAGGGCGCTGCGAAATAACGGAGGCCGATGTGCCGTGGAGCTCTCTGTTTTTCCCTTCCGGCAAGAGAAGAATTTTGTT
CGTTCGTCCTGTGTAGTCGAT------GCAGCAGCAGCAGCTCCAGCTTCATTGCCGACGTAGAGAGAGCTCTGCAGCGT
ACGTCGTCGCCTTCCTC-------CAGTCCAGTCCAGTCCAGTAGCATTGGGCCATTGACTCTCCTGAATTACTACAACT
AGTGCTGGCCTTGCCTTT-CTAT--CTATGTAAATGTAACTAAATCCATCTACTCACTGATCTGCTCCAAGATTATTA--
-TTGCTTTTACTTGAATATATCATGTCTCGGTAAAATTCTCCCGGGATCAACTTTTGTTACTCTCTGAAGGTGATAAGCT
TGGAGTCGACCGACCG----ACTAGCGCACCAGGCAGTACCCAAACTCGATCGTCCGGCCATGCGGGCACGTGTATGTCT
CGGCCCGGCACGCGGCGCGCGGGCCACGTGCCATGGCGCGCTCCGCGCGTCTCCTCGCCGAACGCGTGTCGACTTGAAGG
CCGTTAAAGTGCGTCGGCACTGCCGCTTGCCTCGGCTGTCTGCTCTGCTCC------CGTGGTTCTCTTCTTGCGCGGTT
GCGCACTAGCTTTTGCTTT-GTAGACTCTGTATCATCGACGAGCTCCGACCTCGACTTAGCTCCGGGCAGCAGGCGACGA
TGTCGGTGAGCCTCGTGAGGGCGTCGCTGCCGGCCTGGTGCACGGCGGC---GGCAGCGGGGAGCAGCGGCCTGCGCTCT
CGCCTGCGCGGCACGGCGTGCTCCGGTCGGCGCGTGGGCGTCCGGTGCAGCTCCACCACGCCGCCGGGTTTCCCTCCCGG
GCC---------------------------GACGCCGCCGGGGTTCCCCGCGGTGCCGTCGCCCGAGGAGGTGCCGGGCA
CGGCCCGCCCGCCCGAGGA
>chr6B_848
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-----------------------------------------------------------------TGCATATGTTAAACC
ACAC-TATCATGTTTTCTCGTTGTGATCCAATGAGAGAGAACAAGATTAGACTAACATTTATGTCCTTCCTTTCATGTC-
-----CTGCTGGTGCCTATCTTGACCTTGTTACTA---CCTCC-CATTGTGCAGGAGTAGAATCATGAAGCTGAAAAT-A
GTTTTAGGGAGGTCGATCCGATCACGGTGCAGTTTTCTGACAAGATGCAGATGTTGTTCATCTGGCCAAACCAGCCAGCT
GTTCTTCATCAGACAAGATGCAGATGGATCATTTGAGATGTGACCGAGGTGTTTGATCATAACACATGGAAGCTTGGAAA
AATCGCAAAGATTGTCAAGAACGATTACTTTGTCATCGGGCTGGCTAATTGCATCCAGCTCAAAGAGTTCCACATTTCTA
GCTTGAGGGTTCCACTTGCACATGATGCCCCCACAACTCCTCCTTATGGCAAGCAGTTTCCTACAGCTGACAACAAGGTA
AGCAAACATCCAGTTTAGTTCCTAGAGCGTATAAATGTGCTACTTTTCATCTCTCAAATGAG------------------
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>chr5D_869
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------ATCCTGTTTTCTCATTG-GATCCAATGAGAGAGAACAAGATTAGATTAACATTTATGTCCTTCCTTTCATGTG-
-----CTACTGGTGCCTATCTTGACCTTGTTACTA---CTTCC-CATTGTGCAGGAGTAGAATCATGAAGCTGAAAAACA
GTTTTAGGGAGGTCGATCTAATCACGGTGCAGAGGGCC-ATGGTT---------------TCAGGCCAAACCAGACAACT
GTTGTTTATCAGACAAGATGCAGATGGATCATTGGAGATGTGACCGAGGTGTTTGATCATAACACATGGAAGCTTGGCAA
AATCGCAAAGATTGTCAAGAACGATTACTTTGTTATCAGGCTAGCTGATTGCATCCAGCTCAAAGAGTTCCACATTTCTA
GCTTGAGGGTTCCACTTGGACATGATGCCCCCATAGCTCCTCCTTATGGCAAGCAGTTTCCTGCAGCTGACAACAAGGTA
AGCAAACATCCGGTTCAGTTC-TGGAGCGTATAAATGTGCTACTTTTCATCTCTTAAATGAG------------------
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>chr5B_2715
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---------TGCGAAATAACGGAGGCCGATGTGCCATGGAGCTCTCTGT-TTTCCCTTTCGGCAAGAGAAGAATTTTGTT
TCTTCGTCCTGTGTAGTCGAT------GCAGCAGCAGCTGCTCCAGCTTCATTGCCGACGTAGAGAGAGCTCTGCAGCGC
ATGTCGTCGCCTTCCTC-------CAGTCCAGTCCAGT-----AGCATTGGGTCCTTGACTCTCCTGAATTACTACAACT
ATTGCTGGCCTTGCCTTTTCTAT--CTATGTAAATG----TAAATCCATCTACTGACCGATCTGCTCCAAGATTATTA--
-TTACTTTTACTTCAAG--ATCATGTCTCGGTAAAATTCTCCGGGGATCAACTTTTGTTACTCTCTGGA--TGATAAGCT
TGAAGTCGACCGACCG----ACTAGCGCACCAGGCAGTACCAAAACTCGATCATCCAGCCATGCGGGCATGTGTATGTCT
CGTCCCGGCACGCGGCGCGTGGGCCATGTGCCATGGCACGCTCTGCGCGTCTCCTTGCCGAACGTGTGTCGACTTGAAGG
CCAGTAAAGTGCGTCGGCACTACCGCTTGCCTCGGCTATCTGCTCTGCTCC------TGTGGTTCTCTTCTTGCGCGGTT
GCGCACTAGCTTTTGCTTT-CTAGACTCTGTATCATCGACGACCTCCGACCTCGACTTAGCTCCGGGCAGCAGGAGACGA
TGTCGGTGAGCCTTGTGAGGGCGTCGCTGCCGGCCTGGTGCTCGGTAGC---GGTGGCGGGGAGTAGCGGCCTGCGCTCT
CGCCTGCGCGGCACAGCGTGCTCCGGTCGACGTGTGGGCGTTCGGTGCAGCTCCACCACACCGCCGGGGTTCCCTCCAGG
CCCGACGCCGCCGGGGTTCCCTCCAGGCCTGACGCCGCCGGGGTTCCCCGCGGTGCCGTCGCCGGAGGAGGTGCCGGGCA
CGGCCCGCCCGCC------
>SNPs
---------------------S--------S----------------------------S----S---------------
--------------------------------------------S-----------------------------------
---------------------------------------------------S------S------S-S------------
----------------------------------------SSS-SSSSS-------S-----------------------
-SS-----------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
-------------------------S------------------S---S-------------------------------
---------------------------S---------SSSSSS-------S-----S-----------------------
------------S------------------S------------------------------------------------
S-S--SSSSS---------------------S--------------------SSS---S----------------S----
----------------------S--------S--------------------------------S---------------
-----------------S--S-----S---------S------S----------S-------------------------
-------------------------------------------S------------------------------------
----------------------SS-S------------------------------------------------------
------------S-------------------------------------------------------------------
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-------------------------------------------------------------------------S------
--------------------------------------------------------------------------SS----
----------------------------S---------------------------------------------------
S-----------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------SSSSS-------
---------------------------------S---------------------------S------------------
--------S--------------------S----------------S---------------------------------
---------------------------------------S------------------------------S---------
----------------------------------------------------------S---------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------S---------------------
---------------------------------------------------------------------------SSSSS
SSSSSSSSSSSS-------------------------------------------S---------S--------------
------------------------------------------------------------------------------S-
---------------------SSSSSS------------------------------------------------S-S--
----------------------------------------------S---------------------------------
-----------------------SS--------------------------S-------------------------S--
-S------------------SS-------------S--------------------------------------------
----------------SSSS-----------S------------------------------------------------
--S-----------------------------------------------------------------------------
---------------------------------------------------SSSSSS-------S------S-S------
-------S--------------------------S----------------S-------------------S--------
----------------------------------S---------------------------------------------
-------------S-------------------------------------SS---S-----------------------
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-------------S-----
>forward_917
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-----------------TCCGCTGGACCCATTAAGGA-------------------------------------------
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>reverse_2776
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-------------------------------------------------------AGTCCAGTCCTGACAGACGA-----
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