>input_sequence_47177
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------------ATGGAGACCCTCCCCTGTGATTTTCGGGAGGGGATGGAGACCCTCCCCTGCGAGATTCGTGAGGCGAT
TGAGGTACTAGACAAGGATAAG----------------------------------------------------------
-----------------------------------------GCCGAGCGGATCCAGGAGATTGCGGAGAAGCAGGCGATC
GAGATGATCCAATGGTACTATGATAAGCTGAAGGAGAAGGAACCGGATTCTTATCAAGACTCGTCTGATTATGAAGACTC
GTCATCGTCTGATGACGAAGACTCGTGTGAGTTTGATGAAGATAGGTGTCGCCGTGACTGGAACCGTCTATATGCCGGCG
TGTTCGGTTCCTTCGATGATTTCAGTAAGCCCTTCCGCCAAATTCGCTTGGCAACGATGAAAACCGCCATTGATGCACAT
GTTGATCAAAGTCCCTCATGTTTATGCGTGCAGAGTCTATCCCAGCCATGCGTTACACGGACAAACCTGCGCCTCCCAAC
TCCGCCTGGGAGGATGATACTCTCCAGATCTTTTCAATCGAAGTCATGGGAAGAGAACAACAAAAATTAGAGTGGCCGCT
GGATGTGTTCGGTATGGTTGCTGCGCGCGACTCGCTGGAT--------------CACAATCGCAACATTATCTTCAGTCG
TGAACGGGACAATTGTCAGACCATCAGTGAGGAGGTTTGGACTCCCACTT-GGCAAATTTTAATTATTTGGCTCGGTTCT
TCTATGCTTTCACTGAGCACCACTAGACCTCCATTAAGCTGATTTAAATGTGATTAATAGTATACGATTTAATCAGGGAT
TTCAGTCCCCACCCACAAGAACAGAATGTGATTTTCAAGATTATAAGCTTGCTAGATCTTATGGCACAAATATGCTACCC
TGACTATTCTCCCATCGTGCTTGTAATGCACCTCATATCACACATCATTTATGTGCTTTGGGTTCAGTAAGAGGATTTTG
TAATTTGTTTCTCATTAAGCTGGGTGCCTTCACACATTCTGCTCCCACCGATAGGTTTACTATGTTAACATAATTAGTTA
ACTTCAGTTTGCCATTATGTGATTTACAAGTATATAATGTGCTTGTTTTTATACCC--ATGAACTGTAC---ATTGTTGC
CCA----TTTAATTAATTGTTTCGTGCAGAGTCCCTATCTAGAACTCACAGGCCCTACACGTGCTGTTGTGGTGTCGGAT
CGTGCGGACTTTGAGGTTAAGCTGAAAGTGAAGGGCGCTAGTGAATCCGAGGATGAATATTTAAGCTGTGTATCTATTCC
CTACAATTGCTATTCCAGACCCACTCACTCACGCTTGGTTGAGAAGCTTGAGACTAGCAGGCTCACCACACTCAAGTTGA
CACTTGGCTTCATCGTCGACTCTGTGGAGGCCACGATCAGCGTGAGGGTTATCAGTGGATCATGGCCAGAGTGTTCTCGA
AGTTTATTTACTGCCAGTACCGCCAGCATAGATCACATGAAAGTCACGTTGCTCGATTTCGAAGGCGACGGATTGCCTGT
TGCCGCTGATGGCAATGTTCAACTTTCACGCCGTGTTGCTTCTGTCGAGCTTGCTGGTGAACTAAGAGTCTCCGCTGAGG
CACAGTGTGAAGATGAGACTTTGGCTGATGTCAAAAGTTTTTACACCAAGGAAGGCCAGTAG------------------
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>chr1D_1_TraesCS1D01G108400
AGACACAGACGCTCATACATGCGCACATACATCCACCCCTATGAACACACGCATGCACGCACGCACATCTTACCCTCTAT
GAGCACCTTCAAGAGACTGACCTAGCACATTATCCTGAGAGTGATGAAGTCGCCATAGACGCCTTTATAGTCAACGGAAA
TGTCTCCTCCCACTGAACGCACATCACCGAAAAGTCTGAAATAAATTCAGAAAAATGCGAGCCCCAAGTCTAGGGCTTGA
ACCCAGATGAGTTGGGGTTACCACTATCCTCCTAAGCATCCAACCACAGGTTGATTCGCTAACTATGTTTATTTGATGAC
TACTTTTTTTCGTACATATTGTATATTTTTGGTATCAGGAACAG----TTTTATACAGGGTTACCATTTTTGAAATATAT
GATTAA--TTTTTTATACACAATCTAATATTTTTATTTAAATTTTTTATTTTTATTT-TCAATGT-TTAATGCGCATTCG
ACATTTTTGGTATACATCAGGATCA-TTTTTATACACATTTAAAATTTTCCAAATAGATGACTAACGTTTTTCAAATGCT
TGAATAACACTTATAAATACATGGTCAACTTTTGTGATACACATTGAATTTTTTCTATACATTTTTTATACATGAGAAGC
GTTTTTTTCTATACACATTTAACGTTTTACAAATGCTAGATTAACATTGTTTAAATCTTTAATGTAGAGTGTTTTTTAAT
ATTATATTTATAATATTTGGAAGTATAAACAAAAGTAAACATAAATAAAGGAAAACATGAAACAAAAACAAAAAACGTGA
AAAAAAAG--AAAAAAAAGGCTGTGGTCTCCCGCGAGATGGGCCGGGCTAGTAGCGGCCTTAGCTTCTCCCTGTGTATGG
GCCGGGAAGCCCAACCCATCTGACC---CAGTCTGTCCTCTCTTGC--GGCTTTTTATGCTCG-----------------
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-----------------------------------------------------------------TCAACCGGTATCATC
CGACACCAG----------------------------------TCGAGAGGAAGTTTTTCTCGCGGCAGCAGAGCGGTGA
ACGGCGGCGGTGATGGAGACCCTCCCCTGTGATTTTCGGGAGGGGATGGAGACCCTCCCCTGCGAGATTCGTGAGGCGAT
TGAGGTACTAGACAAGGATAAG----------------------------------------------------------
-----------------------------------------GCCGAGCGGATCCAGGAGATTGCGGAGAAGCAGGCGATC
GAGATGATCCAATGGTACTATGATAAGCTGAAGGAGAAGGAACCGGATTCTTATCAAGACTCGTCTGATTATGAAGACTC
GTCATCGTCTGATGACGAAGACTCGTGTGAGTTTGATGAAGATAGGTGTCGCCGTGACTGGAACCGTCTATATGCCGGCG
TGTTCGGTTCCTTCGATGATTTCAGTAAGCCCTTCCGCCAAATTCGCTTGGCAACGATGAAAACCGCCATTGATGCACAT
GTTGATCAAAGTCCCTCATGTTTATGCGTGCAGAGTCTATCCCAGCCATGCGTTACACGGACAAACCTGCGCCTCCCAAC
TCCGCCTGGGAGGATGATACTCTCCAGATCTTTTCAATCGAAGTCATGGGAAGAGAACAACAAAAATTAGAGTGGCCGCT
GGATGTGTTCGGTATGGTTGCTGCGCGCGACTCGCTGGAT--------------CACAATCGCAACATTATCTTCAGTCG
TGAACGGGACAATTGTCAGACCATCAGTGAGGAGGTTTGGACTCCCACTT-GGCAAATTTTAATTATTTGGCTCGGTTCT
TCTATGCTTTCACTGAGCACCACTAGACCTCCATTAAGCTGATTTAAATGTGATTAATAGTATACGATTTAATCAGGGAT
TTCAGTCCCCACCCACAAGAACAGAATGTGATTTTCAAGATTATAAGCTTGCTAGATCTTATGGCACAAATATGCTACCC
TGACTATTCTCCCATCGTGCTTGTAATGCACCTCATATCACACATCATTTATGTGCTTTGGGTTCAGTAAGAGGATTTTG
TAATTTGTTTCTCATTAAGCTGGGTGCCTTCACACATTCTGCTCCCACCGATAGGTTTACTATGTTAACATAATTAGTTA
ACTTCAGTTTGCCATTATGTGATTTACAAGTATATAATGTGCTTGTTTTTATACCC--ATGAACTGTAC---ATTGTTGC
CCA----TTTAATTAATTGTTTCGTGCAGAGTCCCTATCTAGAACTCACAGGCCCTACACGTGCTGTTGTGGTGTCGGAT
CGTGCGGACTTTGAGGTTAAGCTGAAAGTGAAGGGCGCTAGTGAATCCGAGGATGAATATTTAAGCTGTGTATCTATTCC
CTACAATTGCTATTCCAGACCCACTCACTCACGCTTGGTTGAGAAGCTTGAGACTAGCAGGCTCACCACACTCAAGTTGA
CACTTGGCTTCATCGTCGACTCTGTGGAGGCCACGATCAGCGTGAGGGTTATCAGTGGATCATGGCCAGAGTGTTCTCGA
AGTTTATTTACTGCCAGTACCGCCAGCATAGATCACATGAAAGTCACGTTGCTCGATTTCGAAGGCGACGGATTGCCTGT
TGCCGCTGATGGCAATGTTCAACTTTCACGCCGTGTTGCTTCTGTCGAGCTTGCTGGTGAACTAAGAGTCTCCGCTGAGG
CACAGTGTGAAGATGAGACTTTGGCTGATGTCAAAAGTTTTTACACCAAGGAAGGCCAGTAGAAGCCATGGTATCCTCAA
CGTCGGCTCCTGTAAGATGAAAGTCACGGTTGCCTGGTCTCTTTTCGACTGCGGCCCATTTGGGTGATGCTATGCTTTTG
TGAGCTGTGCTGCAGTAGTGCCATGGTTGTTGCTCACTTATCCTGTTAAATATGCTCGTAGTGGTAATTTGCATATATGA
ACTAATGATGATACTCGACAAAGATATTGTTTTCATTATCTCGTTGTGTAGTCCTGTTTGGTGAATCCTACCATAGTTGA
CTTGTGGAACGTTTTTCTGTTTGATGCTTAAGTGAACATGTTGAACACCCTGGGAGCGCA---------------TTTAT
GCAGGATTGTGTCAAAATCCACTTAAAAA-TCAATGGCAATCAAAACTGGAGCATTCAATTATCTTCGTACTACTATCAA
TAGCATTTTACCTCCAGTGGTCACTGTCACATTTATCACACGAGTACAATTATCTTCACAT-------------------
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-------------------------------------------GGACTCATTATCCATCAGCAGGAACAGATACAAGAGT
CGGCCTTCAACTGCATGCCCAAAACGTCCGGCCTCATCCGGATATATTTGAAGTGCAAATCCAAAATCGTTCGGATACAT
TCAAAGTGCAAATCGTCCGGCCTCATCCGGATACATTA---------------------------------------ATT
TAAAGTGCAAATGTTGATCATAATAGCAATTTGACGAGGAAATCAAAGTGCATATGTATGCAATCTTCACAAT--TAATA
AACAATGGATATTCCCAGACTGGTTGTCCGTGCCTCCTTCCTTATCACTTTGCCGTTTGCAACT------CGCCCGCCTC
TTGCATCTCTGCCGTCGAGTGCTTCAACATCCTTGCATAGATGGCTTAGCACAATCTTCGCCGCATCA---GGATCTAAA
TCGTCCATCTTCATGGTCAACATTTTGGTTTTCTTCGAAACGGTCGCAAGCTCAACCCTC-------CTCTCTTCAAGCT
TGGTTTTCTTCACATCGAGCTCGGTCTTCTTCTTTTCCGAGGTTAATCTTCTTCTCCGTTGCCGCCATGAAGATGTC
>chr1A_1
AGATACAGACGCTCATGCATGCGCACATACATTCATTCCTATGAACACACGCATGCACGCACTCATACCCTACCCTCTAT
GAGCACATTCAAGAGACTGAACTAGCACATTATCCTGAGAATGATGAAGTCACCATAGACGTCTTTATAGTCGACGGGAG
TGTCTCCTCCCACTGAACGCACATCACCGAAAAGTCTGAAATAAATCCAGAAAAATGCGAGCACCAAGTCTAGGGCTTGA
ACCCAGATGAGTTGGGGTTACCACTATCCTCCTAAGCATCCAACCACAGGTTGATTCGCTAACTATGTTTATTTGATGAC
TACTTTTTTTCACACATATTGTATACTTTTGGTATCAGGAACAG----TCTTATACACGGTTATCATTTTTGAAATATAT
GATTAA--CTTTTTATACACAACCAAATTTTT---TTTTAATTTATATTTTTTTATTATCAATGT-TTAATACGCATTCG
ACATTTTTGGTATACACCGGGGGCATTTTTTATACACATTTAAATTTTTCTAAATAGATGATTAACATTTTTCAAATGCT
TGAATAACACTTATAAATACATGGTCTACTTTTGTGAGACACATTGAATTTTTCCTATACATTCTTTATACATGAGAAGC
GTTTTTTTCTATACACATTTAACGTTTTACAAATGCTAGATTAACATTGTTTAATTGTTTAATGTAGAGTGTTT-TTAAT
ATTATATTTAGAATATTTGGAAGTATAAACAAAAGTAAAA--AAATAAAGTAAAACATGAAAACAA---AAATAACGTGA
AAAAACAG--AAAAAAGAGGCTGTGGTCTCCCGCGAGATGGGCCGGGCTT-TAGCGGCCTTAGCTTCTCCCTGTGTATGG
GCCGGGAAGCCCAACACATCTGACC---AAGTCTGTCCTCTCTCTTGTGGCTTTTTATGCTAG-----------------
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-----------------------------------------------------------------CCAACCGGTATCATC
CGACACCAATCT-------CCCCTAAAAAAAATTCGACACCAATCGAGAGGAAGTTTTTCTCGCGGTAGCAGAGCGGTGA
ACGACGACGACGATGGAGACCCTCCCCTGTGATTTTCGGGAGGGGATGGAAACCCTACCTTGTGAGATTCGTCAGGCGAT
GGAGGTACTGAACAAGGATAAG----------------------------------------------------------
-----------------------------------------GCCGACCGGATCCAGGAGATTGCGGAGAAGCAGGCGATC
GAGATGATCCAATGGTACTATGATAAGCTGAAGGAGAAGGAACCGGATTCTTAT------------------GAAGACTC
GTCATCGTCTGATGACGAAGACTCGTGTGAGTCTGATGAAGATAGGTGTCGTCGTGACTGGAACCGTCTATATGCCGGTA
TGTTCGGCTCCTTCGATGATTTCAGTAAGCCCTTCCGCCGAATTCGCTTGGCAACGACGAAAACCGCCATTGATGCACAT
GCTTATCAAAATCCCTCGTATTTATGCGTGCAGCTGCTATCCCAGCCATGCGTTACACGGATAAGCCCGCGCCTCCCAAC
TTCGCCTGGGAGGATGATACTCTTCAGATCTTTTCAATCGAAGTCATGGGAATAGAGCAGCAAAAATTAGAGTGGCCGCT
AGGTGTGTTTGGTATGGTTGCCGCACGCGACTCGCTGGATCACGATCGCTGGATCACAATCACAACATTATCTTCAGTCG
TGAACGGGACAATCGTCAGACCATCAGTGAGGAGGTTTGGACTCTCACTT-GGCAAATTCTAATGATTA-----------
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---------------------------------------------------------------GTTAACATAATTAGTTA
ACTTCTGTTTGCTATTATGTGATTTATAAGTATATAATGTGCTTGTTTTTATACCCCCATCAACTGTAC---ATTGTTGC
CCA----TTTACTTAATTGTTTCGTGCAGAGTCCCTATCTAGAACTCACAGGCCCTACACGTGCTGTTGTGGTGTCGGAT
CGTGCGGACTTTGAGGTTAAGCTGAAAGTGAAGGGCGCTAGTGAATCCGAGGATGAATATTTAAGCTGTGTATCTATTCC
CTACAATTGCTATTCCAGACCCACTCGCTCACGCTTGGTTGAGAAGCTTGAGACTAGCAAGCTCACCACACTCAAGTTGA
CACTTGGCTTCATCATCGACTCTATGGAGGCCACGATCAGCGTGAGGGTTATCAGTGGATTATGGACAGAGAGTTCTCGA
AGTTTATTTACTGCCAGTACCGCCAGCATAGATCACATGAAAGTCGCGTTGCTCGATTTCGGAGGCGACGGATTGCCTGT
TGCCGCTGATGGCAAGGTTCAGCTTTCGCGCCGTGTTGCTTCTGTCGAGCTTGCTGGTGAGCTAAGAGTCTCCGCTGAGG
CTCAGTGTGAAGATGAGACTTTGGCTTATGTC-AAAGTTTTTACACCAAGGAAGGCCAGTAGAAGCCATGGTATCCTCAA
CGTTGGATCCTGTAAGATGAAAGTCACGGTTGCCTGGTCTCTTTTCGACTGCGGCCCATTTGGGTGATGCTATGCTTTTG
TGAGCTATGCTGCAGTAGTGCCATGGTTGTTGCTCACTTATCCCGTTAAATATGCTTGTGGTGGTAATTTGCATGTATGA
ACTAATGATGATACTCGACAAAGATATTGTTTTAATTATCTCGTTGTGTAGTCCTGTTTGGTGAATCCTACCATAGTTGA
CTTGTGGAATGTTTTTCTTTTTGATGCTTAAGTGAACATGTTAAACACCCTGGGAGCGCACACCAGTCACAAGTCTTTAT
GCAGGATTGTGTCAAAATCCACTTAAAAA-TCAACGGCAATCAAAACTGAAGCATTCAAAGATCTTCCTAGTACTATCAA
TAGCATTTTACCTCCAGTGGTCACTGTCACATTTATCACACTAGTACAATTATCTTCACATGTGGGTTCGGCTCCTCTAC
AGTTATGTTATTACTGTACCCGTGCAGTTACTTGCACAATCTGCCCTTCATTTCAATCAAAGGGCTCTCATTTCTCCAAG
TATCTCTCTGTCACAGCGTGTCTTCCACCCCATGTCTGTCACAGCGACGCCTTCCTCCTTCCGCCGCCTCCGACCTTCAC
CTCCTCAACCCGCTCACCGGCGCGCGACTGCCCTCCCGTAGGCCGTGACGCTGGCCTTCGTCCACCCCAGCCACGACGCA
AATGAACACCTAACATCCAAATTACAGTGCTGCTTATGACTCCTTATAAAGACGATGGCACGGCTGTGATAATCCCGCCA
GCCAGGCTCCGGCACGAGCTCCACGAGAAGGTCATACTCATGTCCGCGCCGCCGAGGCGCTGAAGAAGCAGACCATGGCA
TCGGAGTCAGGCCCTTAGGGCGGCTACGCTGGCATGCTCATCTGCAGCTACTGTCCCTCATCGTCATCGTCCCAAACCGC
CGACACGAGGTGGACGTTGCTTCAGCCCTGCTGCTGTTTGGTCCTCTTCTATCGTGGTCGGCGCTGCTTTGGTCGCTTCA
CTCTGCGGTTGCGGCTCGGGGCGTGCGTGTTCCATATCGATGGCGTGCAGCAGATACCTCATTAAGCTCTCGTCGCTCGG
TGCAGGCGGCTAGCTGCGCAAATTATCAAATCCCGAACGGCCAAGTCCAAAGCATATACTAGCATCGTACAGATCCGCAT
GCACAATTGAGGCTGAGTTCTTCGAGTGCATCAGTGTTCGGTGAACGCCGGCGGACAGCAAGAAACGCCCGCTTCCTCAG
GAAGAAGACGTCGGTGTGATGAGAAGGATGTAGAGAAAGGGAAGCCCTCCGATTAGATTGAACAAGTAACTGTACGGGTG
AAGTAGCAACATAACTGTAGAGGAGACGAACCCCCCTTCACATGGACTCATTATCAATCTGCGGGCACGGATACAAGACT
CGGCCTTCAACCGCATGCCCAAAACGTCCGGCCTCATCTGGATATATTTGAAGTGCAAATCCAAAATCGTCCGGATACAT
TCAGAGTGCAAATCGTCCGG----------ATACATTTAAAGTGCAAGTCCCAAAATGTCCGGCCTCATCCGGATACATT
TGAAGTGCAAATGTTGATCATAATAACAATTTGACGAGGAAATCAAAGTGCATATGTATGCAATCTTCACAAT--TAATA
AACAACGGATATTCCGAGACTGGTTGTCCGTGCCTCCTTC------ACTTTGAATTTTGCAACTCCGCTGCGCCCGCCTC
TTGCATCTCTGCCGTCAAGTGCTTCAACATCCTTGCATAGATGGCTTAGCACGATCTTCGCCGCATCATCAGGATCTAAA
TCGTCCATCTTCATGGTCAACATTTTGGTTTTCTTCAAAACGGTCGCAAGCTCAACCCTAAACCCTTCTCTCTTCAAGCT
TGGTTTTCTTCACATCGAGCTCGGTCTTCTTCTTTTCCGAGGTTAATCTTCTTCTCTGTCGCCACCATGAAGATGTC
>chr1B_59
----------------------------------------------------------GCACACACGTCCTACCCTCTAT
GAGCATCTTTGAGAGACTGAGATAGCATATCATCCTGAGATTGACAAAGCCGCCATGGATGTCTTCATAGTCAACGAGAA
TGTATCCTCCCATTGAACGCACACTACCAGAAGGTCTG-AATAAATCTAGGAAAATGCGAACACCAAGTCTAGGACTTGA
ACCCTGATGGGTTGGAGTTACCACTATCCTCCTAAGCATCCAACCGCAGGTTGATTCGCTAACTATTTTTATTTGATTAC
TACTTTTTTTCATACATGTTTTATATTTTTGGTATATATCAAGAACATTTTTATACAAGGTTTTAATTGTTGAAATATAT
GATTAATTTTTTTCATACACAATCAAATATTT---ATTAAAATTTATATTTTTATGT-TCCATTCCTTAATACACATTCT
ACATTTTTCGTATACACCGGGAGCATTTTTTATACAAATTTAACATTTTTTAAATAGATGATTAGCATTTTCCAAATGCT
TGAATAAAACTTATAAATACATG--------TTGTGATACACACTGGATTTTTCCTATACATTTTTATACATGATAAACA
--TTTTTACTACACATATTTAACGTTTTACAAATGCTAGATTATTGTTTTTCAAATTTTTAATGTAGACTGTTT-TTAAT
ATTATATTTAGAATATTTGAAAGTATAAAAAATAG-------------------------AAAATAAAACAAAAACGTGA
AAAACAGAAAAAAAGAGAGGACGTGGTCTCCCGCGAGCTGGGCCGGGCCAGTAT---CCTTAGGTTCTCCCTGTGTATGG
GCCGAGAAGCCCAACCCATCTTATCTGACAGTTTGTCCTCTCTTGC--GGCTTTACCTGCAGCTTATAATTTTATTATTG
ATAAGTTTAGAGCTAAACTTAATTGCTACAAGGCTAACAGGTTGTCTCATGCAGGAAGACTCACTCTTATTAAATCTGGT
TTTGCTTCCCTTCCTGTGTATTACATGTCTAATATCCTTTTAAGTAAATCCACCATTAATAAACTCACTTCCATAATTAG
AAAGTTCTGGTGGACAGGTATTGATAAGGATAATGCTTCCAAACCTATCTGCTTTAGGGCTCGGGATGATATTTGCAAAC
CTATGCATCAAGGTGGTCTAGGCATTAGAGATCTTTATATGATGAATAAGTCTATGGTTGCTATGATGGCTTGGAGAGTT
ATTAAGAGTCCTAATTTTCTTGTTACGAAAGTTCTCAAAGCCAAATATTTTCATAACTCTTCTATTTGGAAAGTGAATGG
CAATGTTCCTAAATCTGCTTTCTGGTCCTCTATTCTCAAAGTTCTTCCTTTCATTAGCAAGGCTAGTCATACTCAAATTG
CTAATGGTAATACTTGTATTTGGACTAGTCCTTGGTGCAATGATTGGGACAATATTTATGATCACCTTAAACCTAATCTA
GGTATCCCTTGTCCTAAAGTTGTTAGTGATCTTTGGAAACCAAATTGTAAGAGTTGGGATGAGGATAAAATTAATATCTT
TTTCGATGATAATTTCAAGAGAAATATTTTACAAACTCCTATCATTAATGCTAATATGGACGACACTTTATGTTGGATTC
ATACCCCTAATGCAGAGTGTACCACTAAAAATGCTTATAAAGCTTTGATGCAGGAGGCCCAACCCAGGTTACAATCTCAA
AATCACACTATTTCAGATTCTAAAATTTCTATTCTCAATCAGGTTTGGAAAAGCAAAAACCTGGCTCCAAGAGTCAAAAC
CTTTGCATGGAGAATTCTAAGAAGAGCTTTAGCTTCAGGGCTTAGGGGATCCAGGTATTCTACTCACATTAAAAAGGAAT
GTTGCAGGTGCGGCGAGGCGGAGACAGACTTGCATCTTTTCTTTACTTGCAATTTCACTAGAGCTATTTGGTTCCTATTT
GGTCTCAAGTCTGATGAGTTCAATCATAACTTATATCCTTCTGATGTGATTCAAAGGATTTTATCTTCTCATCATGCTGA
CTTAGATCTGGATACCAGTTTCACGTTGCTTTGGAATATTTGGAAAGCGAGGAATGATCTTCTTTTTAATAAGAAAAAAT
GGAGTATTATGCAAGTTATATATGCTACAAACGCTATGCTAAATGCGGAGTTAATGGAGGAGAAGGCGGCGGCTCACATC
AACCCTGCAAACAATAATATTTCTCCTTTTCACGTTCAAAATATATAGTTCCAAAATGCAGGTCTTTTGGCGTACAGTGA
TGCTGCGTACAATCCGGAAATTGCAAAAGAAGAAGCTGGTCTTGGAGTAGAAATGTTAGTAACAGCCATACTGTATTTGT
TCAAGCTGCTGCAAAAAATGTTTGCCCTGTTTTGCAGGCTAAAGCTATTGGATTATCACTGTCGGCTGAGGTGGTTAAAG
CTCTAGGATGGAATACTGCTATTTTCTTATCTGATTGCAGGAATCTTGTCCAGGTGGCTAAAGCAAGAAACCTTTTAGAG
AGTCCAGGAGATTGGAGGATAAGACCTATGCTTGCTGAATTTCTTAATCACACTTTTTTCTTTCATCATGTGAAGTCAGG
TATATACCTAGGAATGGGAATGTCATTGCTCATTTCCTAGCTAAGAAAGCTTTTATGCAAAAAGTTGTCTCTAGTTCTTT
AATCTTATGCAGCAAATCTTAGCAAGCTTTGAACTCTATCTCCTTTTCTTTTGGAAAGTTGATCTCTGTACACTGTTTGG
GTTGCAAATAAATAAAATCAAGGGCTCTCTTTGAGGGCCTATATGTTTTCAGAAAAAAATCGGGATCATCCGGTATCATC
CGACACCAGTCGAGAGGAACCCCTAAAAAAAACCAG-------TCGAGAGGAAGTTTTTCTCGCGGCAGCAGAGCGGTGA
ACGGCGGCGGCGAAGGAGACCCTCCCCTGTGATTTTCGGGAGGGGATGGAAACCCTACCTTATGAGATTCGTGAGGCGAC
GGAAGTACTGGACAAGGGTCTTCGTGCCAGAGCTCGGGAGGCCGAGCAGCAGAGCAGGACGCAGAGATGCGGGACACGGC
TTCCCAGCGCGGAGGAGGCCCGAAGCGAAGGCCCGGACGATGCCTACCGGATCCAGGAGATTGCGGAGAAGCAGGCGATG
GAGATGATCCAATGGTACTATGATAAGCTCAAGGAGAAGGAACCGGATTCTTATCAAGACTCGTCTGATTATGAAGTCTC
GTCATCGTCTGATGACGAAGACTCGTGTGAGTCTGATGAAGATAGGTGTCGCCGTGACTGGAACCGTCTATACGCCGGCG
TGTTCGGCTCCTTCGATGATATCAGTAAGTCCTTCCGCCTAATTCGCTTGGCAACAATGAAAACCGCCATTGATGCACAT
GCTTATCAAGATCCCTCGTTTTTATCCGTGCAGCGTCTATCCCAGCCATGCGTTACACGGACAAACCTGCGCCTCCCAAC
TCCGCCTGGGAGGATGACACTCTACATATCTTTTCAATTGAAGTCATGGGAAGAGAGCAGCAAAAATTAGAGCGGCCGCT
GGATGTGTTTGGTATGGTTGCTGCACGCGACTCGCTGGAC--------------CACAATCGCAACATTATCTTCAGTCG
TGAACGGGACAATCCTCAGACCATCAGTGAGGAGGTTTGGACTCTCACTCGGGCAACTTTTAATGATTATTAGTTAACAT
AGTTAC--------------------------------------------------------------------------
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--------------------------------------------------------------------------TAGTTA
ACTTCTGTTTGCTATTATGTGATTTATAAGTATATAATGTGCTTGTTTTTATACTC--ATCAACTGTACTACATTGTTGC
CCATGGGTTTAATTAATTGTTTGGTGCAGAGTCCCTATCTAGAACTCACAGGCCCTACACGTGCTGTTGTGGTGTCGGAT
CGTGCGGACTTTGAGGTTAAGCTGAAAGTGAAGGGCGCTAGTGAATCCGAGGATGAATATTTAAGCTGTGTTTCTATTCC
CTACAAGATCTATTCCAGACCCACTCGTTCACGCTTGGGTAATAAGCTTGAGACTAGCAAGCTCACCACACTCAAGTTCA
CATTTGGCTTCATTGTCAACTCTGTGGAGGCCACGATCAGCGTGAGGGTTATCAGTGGATCATGGCCACAGAGTTCTCGA
AGTTTATTTACTGCCAGCACCGCCAGCATAGATCACATGGAAGTCG-GTTGCTCGATTTCGGAGGCGACGGACTGCCTGT
TGCCGCTGATGGCAAGGTTCAGCTTTCACGCCGTGTTGCTTCCGTCGAGCTTGCTGGTGAGCTGAGAGTCTCCGCCGAGG
CACAGTGTGAAGATGAGACTTTGACTGATGTCAAAGC-TTTTACACCAAGGAAGGCCAGTAGAAGCCATGGTATCCTCAA
CGTTGGCTCCTGTAAGATGAAAGTCACGGTTGCCTGGTCTCTTTTCGACTGCGGCCCATTTGGGTGATGCTATGCTTTTG
TGAGCTGTGCTGCAGTAGTGCCATGGTTGTTGCTCACTTATCCCGTTGAATATGCTCGTAGTGGTAATTTGCATATATGA
ACTAATGATGATACTCGACAAAGATATTGTTTTAATTATCTCCTTGTGTAGTCCTGTTTGGTGAATCCTACCATAGTTGA
CTTGCGGAACGTTTTTCTGTTTGATGCTTAAGTGAACATGTTGAACACCCTGGGAGCGCACACCAGTCACCGGTCTTTAT
GCAGGATTGTGTCAAAATCCACTTAAAAAATCAATGGCAATCA-----------------------------------AA
TGGCATTTTACCTCCAGTGGTCACTCACATTTA-----------------------------------------------
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-------------------------------------TCACACGGACTCATTATCCATCTGCAGGAACGGATACAAGAGT
CGGCCTTCAATTGCATGCCCAAAACGTCCGGCCTCATCCGGATATATTTGAAGTGCAAATCCAAAATCGTTTGGATACAT
TCAAAGTGCAAATCGTCCGGCCTCAGCCGGATACATTTGAAGTGCAAGTCCCAAAACGTCCAGCCTCATCCGGATACATT
TGAAGTGCAAATGTTGATCCTAATAGCAATTTGACGAGGAAATCAAAGTGCATATGTATGCAATCTTTTGAAGTGTAATA
AACAACGGATATTCCCAGACTGGTTGTCCGTGCCTCCTTCCTTATCACTTTGCCGTTTGCTCCTCCACGGCGCCCGCCTC
TTGCATCTCTGTCGTCAAGTGCTTCAACATCCTTGCATAGACGGCTTAGCACGATCTTCGCCGCATCG---GGATCTAAA
TCGTCCATCTTCATGGTCAATATTTTGTTTTTTTTTGAAACAGTCGCAAGCTCAACCCTC---------CTCTTCAAGCT
TGGTTTTCTTCACATCGAGCTCGGTCTTCTTCTTTTCCGAAGTTAATCTTCTTCTCCATCGCTGCCATGAAGATGTC
>SNPs
---S------------S---------------S--SS-------------------------S------S----------
--------------------S-------------------S--------------------S---------------S--
----------------------------------------------S---------------S-----------------
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-----------S---------------------------------------------S-----S----------------
------------------------S-------SSS------------------------------------S--------
----------------S-S---S---------------------------S----------S----S-------------
--------------------------S--------------------------S--------------------------
--------------------------------------------------------S-----------------S-----
----------S----------------------------SSS--------S-----------S-----S-----------
----------------S---------------------------------------------------------------
-------------------------------------------------------------S------------------
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----------S---------------------------------------S-----S--S--S-----------------
S--------S----------------------------------------------------------------------
----------------------------------------------S---------------------------------
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--------------------------------S-----------------------------------------------
-------S-------------------------------S----------------------------------------
-S-S------S------S-S-------------S----------------------------------------------
-----------------------S--------------------------------S--S--------------------
---------S--------------S-------------------------------------------------------
-------------S------------------------------S-------------------S---SSSSSSSSSSS-
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
-----S------S-------------S---------------------------------S-------------------
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--------------------------S--------------------------------S--------------------
-----------------------------------------------------------------------S--------
---------------------------------------------S---------------S------------------
---------------S-----S--------------------------------------S-------------------
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---S----------------------------------------------------------------------------
-------------------------------------------S------------------------------------
---------------------------------S----------------------------------------------
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-----------------------------------------S--------------------------------------
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-----------------------------------------------------------S--------S-----------
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-------------------------S-----------S------------------------------------------
-S------------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
----------------S-----------------------------------S---------------------------
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-----------------------------------------------------------S-----------------
>forward_37
-----------------CATGCGCACATACATCCACC-------------------------------------------
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>reverse_4030
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-----------------------------TCACACATTCTGCTCCCACC-------------------------------
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>forward_3793
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-------------TGAGCACCACTAGACCTCCA-----------------------------------------------
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>reverse_6533
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----------------------------------------------------AATCTTCGCCGCATCAGGAT--------
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-----------------------------------------------------------------------------
