>input_sequence_47175
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----------------------------ATGAGCTGCGGCGGCGTGGGGCACGGCGGGTGGCTGCTGGACTACGGCCTCG
TGGAGGAGGAGATCCAGGCCTCCGACTTCATCTACATGGTCGACGACCCGCCGGTCTCAAGGTCAGTCAGCTTCCTTCCC
TATTCTCTTCTCTTTTCGTCGATTTGGAGCTTGTTCGGAGAAAGCATGGGATTCTTGATGGTGGGCTGTGTTACTCACTG
TCGGTGATCGGTCGAATATTCGGCTGGATGATGAACTTTTGTTTGCAGCGTCATACTGGGGTTCGATGCTCCCAGGAGGG
AGGACGCTGCGGCGGCTGCCCAGGACAACTCCGGCGCCAAGAAGAGGTACTACTAGCTAATAATGTTCTTCTGCTCTACC
GAATTTGTTGCGAGTTTTGTGATCTGCTTGCTACTTTTGGTGCTCCTGTTTGGATCATTTGGGCCTCTCTGATTCGATTG
ATTGATGAGAAACATACGAGTGGTAGTTGAGGGAACGCCAGTCTGTCTTTCCGG-CCCCTCTGT-----ATAGTGGCCAC
CAAACTTGACCCGCAGAACACTCCAAAAGTACCCGGTTGTTAGATTGCTGGAATCATCTGCAGACAATTTTGAG----TC
CAATAGATCATCTCACAGCTAGATAAATTACACAAGGCTGAAAACTTTTGAGACAAGTTTAAATTAGCTGACGACTTGAT
---------------------------------------ATGTGGCTATTTTCCCCTGTCTTCAC----AGCCTGGATTC
GGCCTAACTGAAAGTCTGCCAGAATTATCACGGTTACTGAAAACATCTTAGCCAATGATGACGAACCACTGATGCTAAAT
GTCATACAGATCAC-AATTTTAAGACCGGAGTTTGACGTTTTT--------------------ATTCTG--TATGTATCT
GCAGATCCCGTCCAGAGTCGAGCGCGCAGCCCGGCACAAAGGCTTGCCGAGAGAAGCTCCGGCGAGACAGGCTCAACGAG
AGGTATGTTCCAGAGTTGAGAGTTTCAGTTCTATGACTGAAAA--------TCACAGTCTCCCACTGCTTCAGTGGCCGA
CGTGTTCACTAGTAGCCCCACCAAATCTGATCAGCTCTGATCCACCAGGTTCAGTGAGCTCTGCGCCGTCTTGGAGCCCG
GGAAGCCACCCAAGGCCGACAAGGTCGCCATCCTCAGCGACGCCACCCGCCTCCTGGACCAGCTGCGCGCCGAGGCCCAG
AAGCTCAAGGCCTCAAACGAGTCACTCCAGGACTCCATCAAGAGCCTCAAGGTAAACCAGCAACGCGTTGCACTCTGCAC
CATTCATTCATCGTACAGAAAAGCTCAG-GATCTCATGGTTGGATGTGGCCGTATGTATGCAGTCCGAGAAGTCGGAGCT
GCGGGACGAGAAGACGAAGCTGAAGGCCGAGAGGGAGAGGCTGGAGCAGATGCTCAAGGGCGTCAGCGCGGCTGCGGCCG
CCGCCCCGCGGCAGTTCGTCCCGCACCCGGCCGCCGCGGCCGCGCCGCAGTTCCACCCCGCCGCAGCTTACGCGCACGCC
GGCAAGTTCGTCCCGGCGTACGCCGCGGGCTACCCGCCGCCGGCCGCTTTCTGGCAGTGGATACCGCCGACGTCGCTGGA
CACGTCCAAGGACCCCGCGCACTGGCCGCCGGTCGCGTGA----------------------------------------
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------
>chr1B_1_TraesCS1B01G290500
CTAGCCATCGTCGTGTTGTAACGACGGCCTTTTCCGTCACGTT-CCCAAAGTCTCCGGGAACCTTTGCGAGCGAGGGGGC
A------ACGCGAACACAAATGCAACTGGAAAAGGGAGATAGATCGGATTCCCCGAACATAATCGTGGAGAAGAGAAGAG
AGGGGAGGAGCTACGCGAACGCGAGGCCCGCGGGCAAAAAATC--------CCAAATCTTTTG----------GGCGTTG
TTCTCCGCTGCTTTTCGTTTTTTCACAGCGACGTCGCTCGCTGTAGCATT--TTTTACCTTTCGAAAACGGAAGCGTC--
--GCTGTGGCTCGACCAAGGGTATATGTACTGCCGTCCAGACGTGATTTTATTCTTC----TTGATTGAAAACGAGATGA
AAGATGGGGTGATAAATCGTGAGACGTGGCCGCAGGGCGTTCATGGCCGTACTTCC----CTCTCGGTGGCCTGTACTGC
AGCTGATACGCTACGTACTAGTAC--TACGTCCTCCTCACCGCTTGACTCGACAGTCC--ACACA----GCTTAACCCAA
GTGCTGGCCCAGTCCCATCGACTGTATA--CCAAACCAAAGCACCCAGCAAAAACAAATCAAATCATTGCCAAAGCACAG
CAAAGCAAAGCAAGCAAACAAAGAAAGAAA----------------------------------AGGAGAGCGGGCGCGC
ACTGGGCAC-----------------------------------------------------------------------
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-------------------------------------------------GCACGGCACCGAGCAACAGAG----GGAGAA
TAAAAGACGCACGCGTCCCGTCCCACTCAGCTCGCCGGATTTGAATAAGCCCAGCGGCCCGGCGATTGGCCCGCGCCCA-
--CGTCGCATCTATCCTCCTCCAACGATATAC------CAGT---------TGCGTGCTGCTTCGGTCGCGCCAAACGCC
AGCGCCCAATATACATATGCGGAGTATTGGTCACAGC---TAGTACTGGTTTTCCCCGGCGTCCCGATCTCTTTCACCCG
CCTACCTCCCCTCCCTGGCTCGTGCCATCCCCACGCCCGCCACGAAAGCCGGAAAGATCTGCCCCGGATAGCGGCGGGGA
GCGCTCCCGGTCTGCTGGGATTTCGGCCATGAGCTGCGGCGGCGTGGGGCACGGCGGGTGGCTGCTGGACTACGGCCTCG
TGGAGGAGGAGATCCAGGCCTCCGACTTCATCTACATGGTCGACGACCCGCCGGTCTCAAGGTCAGTCAGCTTCCTTCCC
TATTCTCTTCTCTTTTCGTCGATTTGGAGCTTGTTCGGAGAAAGCATGGGATTCTTGATGGTGGGCTGTGTTACTCACTG
TCGGTGATCGGTCGAATATTCGGCTGGATGATGAACTTTTGTTTGCAGCGTCATACTGGGGTTCGATGCTCCCAGGAGGG
AGGACGCTGCGGCGGCTGCCCAGGACAACTCCGGCGCCAAGAAGAGGTACTACTAGCTAATAATGTTCTTCTGCTCTACC
GAATTTGTTGCGAGTTTTGTGATCTGCTTGCTACTTTTGGTGCTCCTGTTTGGATCATTTGGGCCTCTCTGATTCGATTG
ATTGATGAGAAACATACGAGTGGTAGTTGAGGGAACGCCAGTCTGTCTTTCCGG-CCCCTCTGT-----ATAGTGGCCAC
CAAACTTGACCCGCAGAACACTCCAAAAGTACCCGGTTGTTAGATTGCTGGAATCATCTGCAGACAATTTTGAG----TC
CAATAGATCATCTCACAGCTAGATAAATTACACAAGGCTGAAAACTTTTGAGACAAGTTTAAATTAGCTGACGACTTGAT
---------------------------------------ATGTGGCTATTTTCCCCTGTCTTCAC----AGCCTGGATTC
GGCCTAACTGAAAGTCTGCCAGAATTATCACGGTTACTGAAAACATCTTAGCCAATGATGACGAACCACTGATGCTAAAT
GTCATACAGATCAC-AATTTTAAGACCGGAGTTTGACGTTTTT--------------------ATTCTG--TATGTATCT
GCAGATCCCGTCCAGAGTCGAGCGCGCAGCCCGGCACAAAGGCTTGCCGAGAGAAGCTCCGGCGAGACAGGCTCAACGAG
AGGTATGTTCCAGAGTTGAGAGTTTCAGTTCTATGACTGAAAA--------TCACAGTCTCCCACTGCTTCAGTGGCCGA
CGTGTTCACTAGTAGCCCCACCAAATCTGATCAGCTCTGATCCACCAGGTTCAGTGAGCTCTGCGCCGTCTTGGAGCCCG
GGAAGCCACCCAAGGCCGACAAGGTCGCCATCCTCAGCGACGCCACCCGCCTCCTGGACCAGCTGCGCGCCGAGGCCCAG
AAGCTCAAGGCCTCAAACGAGTCACTCCAGGACTCCATCAAGAGCCTCAAGGTAAACCAGCAACGCGTTGCACTCTGCAC
CATTCATTCATCGTACAGAAAAGCTCAG-GATCTCATGGTTGGATGTGGCCGTATGTATGCAGTCCGAGAAGTCGGAGCT
GCGGGACGAGAAGACGAAGCTGAAGGCCGAGAGGGAGAGGCTGGAGCAGATGCTCAAGGGCGTCAGCGCGGCTGCGGCCG
CCGCCCCGCGGCAGTTCGTCCCGCACCCGGCCGCCGCGGCCGCGCCGCAGTTCCACCCCGCCGCAGCTTACGCGCACGCC
GGCAAGTTCGTCCCGGCGTACGCCGCGGGCTACCCGCCGCCGGCCGCTTTCTGGCAGTGGATACCGCCGACGTCGCTGGA
CACGTCCAAGGACCCCGCGCACTGGCCGCCGGTCGCGTGATTCATCAGCTCGATGACGCACGCACGGCGGCGATCGTCGG
AGGATAAGCGTGTGTTGAAGCTTGCTCGTACCGTAGAAGTTGACCGAAGCGCGCGCCCGGAGATAACGTCGGGTT-GCTG
ATGATTGTGTAGCGGTTACTATGATTGTGCTGTGGATATAATGATCCAGGGCTCGCCTGATGCGGATTCCTGGTGATCAT
TGCTCATTGGAGCAGTCTATGTAACAGCTCTAGTGTGATAGCGATGAATATGGTTCATAATTATAGGGTCGAT-------
GAT---GCTTATATAGGGAACGATGAAAATTGTGTCCTGCTTTGGATGACATTAACGCAAATATAGGAAGAATCATACAC
GTGCAAGAA--AACAAAATGATAATCGAGCTTGACAAAAAATATTGCATTGAG-TTTGATAATGCCGCTCTTCTACATTG
TAACCCAACTTTACTCAAGCAAGCTTACCGAAGGTGATTATTTACCATCAAATTAGTC----------------------
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-------------------------------------------------CGCCTGGCCCTCAATAGCGCCCTCGACCATT
TGTATGTTCCTCAATGTTTCTTCTATCATGACATTTGCAAGCTTATCGGCGTGGCCGACATGGCTCTCTGTTTGCTCGTC
GTGGTCGGGGATTCCTTG-CTGGCTATCCGCACTGAAGTTGGAGTCACTTGCTCGTGGAGAAGTGACAATGATGACAGTT
TGTGGACGGCCTTGGCGGTGTTTCTATCCACGGTTGCATGTGTGGGTCTTGTAGGAAGCCAGATCGGCCGAAGGTGCCCT
TTGTGGGCGTGTCGTAGCGATTTTTTCCCGATTTTCTGTAATTAGCCAGGTAATTCTCTTCTGAGCCCTTTGAACTTCTG
TGAAAAAAAAGGTGACGGACAAGACGTTCAAGTTCAAGTAACAATCGGTAGATAGTTACAGGTTCATGGTTTCACCATAT
AAAGATATGCCAAAAGAGACTGCCGCTCAAAGTCTACTCCGCGCCACCGCCTTGGCCCCCTTCCATTCTCCCATCTCGCG
GCCTTG
>chr1A_1
CTAGCCATCGTCGTGTTGTAACGACGGCCTTTTCCGTCACGCTCCCGAAAGTCTTCGGGAATTTT-----GCGAGGGGGC
A------ACGCAACGCGAG-----ACGGGGAAAGGGAGG----TCGGATTCCCCGAACATAATCGTGGAGAAGAGA----
---GGAGGAGCTACGCGAACGCGAGGCCCGCGGGCAAAAAATCGGCCGCGCCCAAATCTTTGTGG---------------
---------------CGTTTTTTCACAGCAGCAAACGTCGCTGTAGTTTTCCTTTTTCTTTTCCGAAACGGAAGCGTCGG
TCGCTGTAGCTCGACCAAGGGTATATGTACTGCCGTCCAGACTCGATTTTATTCTTCTTGATTGATTGAAAACGAGTGGA
AAGATGGGGTGATAA-TCGCGAGACGTGGCCGCGGGGCGTTCGTGGCTGTACTTCT---TCTCTCGGTGGCCTGCACTGC
AGCTGATACGCTACGCTACGTAGCAGCACGTCCTCCTCACCGCTTGACTCGACAGTCC--ACACACACAGCTCAACCCAA
GTGCCGGCCCAGCCCCACCGGCTGCATATACCAAACCGAAACACCCAGCAAAAACAAACCAAATCATTGCA---------
CAAAGCAGAGCAAACAATCCGATAAAAAAACCACAATCCGATCTGACGTAAGGGAGAAAGAAAAAGGAGCGCGGGCGCGC
ACTGGGCAC-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------GCACGGCACCGAGCAACAGAGGGAGGGAGAA
TAAAAGGCGCACGCGTCCCGTCCCACTCAGCTCGCCCGATTTGAATAAGCCCAGCGGCCCAGCGATTGGCCCGCGCCCAC
GTCGTCGCATCTATCCTCATTCGCCGGAGGCCAGCGATACTAGTTGCGTGCTGCGTGCTGCTTCGGTCGCGCCAAAAGCC
AGCGCCCAATATACATATGCGGATTATTGGTCACGACTAGTACTACTGGTTTTCCCCGGCGTCCCCATCTCTTTCGCCCG
CCTACCTCCCCTCCCCGGCTCGTGCCATCCCCACGC------------CCGGAAAGATCTGCCCCGGATAGCGGCGGGGG
GCGCTCCCGGCCTGCTGGGACTTCGGCCATGAGCT---GCGGCGTGGGGCAGGGCGGGTGGCTGCTGGACTACGGCCTCG
TGGAGGAGGAGATCCAGGCCTCCGACTTCATCTACATGGTCGACGACCCGCCGGTCTCCAGGTCAGTCAGCTTCCTTCCC
TGTTCGCTTCTCTTTCCGCCGATCTGGAGGTC---------------GGGGTTCTGGATGGTGGGCTGTGTTACTCACTG
TCGGCGATCGGTCGAATATTCGGCTGGATGATGAACTTTTGCTTGCAGCGTGATACTGGGCTTCGACGCTCCCAGGAGGG
AGGACGCCGCGGCGGCTGCCCAGGACAACTCCGGCGCCAAGAAAAGGTACTG---GCTAGTGATGTTCTTCCGCTCTTCC
GAATTTGTTGCGAGTTTTGTGATTTGCCTGCTACTTTTGGTGCTCCTGTTTCGATCATTTGGGCCTCTCTGATTAGATTG
ATTGATGAGAAACATAGGAGTGGTAGTTGAGAGAACGCCGGTCTGTCTTTCCGG-CCCCTCTAGAGATAATAGTGGCCAC
CAAACTTGACTCGCGGAACACTCCAAAAGCACCCGGTTGTTAGATTGCTG-----------AGACAATTTTGAGTCGGTC
CAATAGATCAGCTCACAGCTAGATAAGTTACACAAGGCTCAAAACTTTTGAGGCAAGTTTAAATTAGCTGACGACTTGAT
ATGTCCCTTACTAGTTAGACCCAATTCTGGAACCTACAGATGTGGCTATTTTCCCCTGTCTTCAC----AGCCTGGATTC
AGCTTAACCGAAAGTCTGTCAGAATTAGCACGGTTACTGAAAACATCTTAGTCAATGATGACGAATCACTGGTGCTAAAT
GACATACAGATCACAAATTGTAAGACCAAAGTTTGACGTTATT--------------------ATTCTGTATATGTATCT
GCAGATCCCGTCCAGAGTCGAGCGCGCAGCCCGGCACCAAGGCATGCCGCGAGAAGCTCCGGCGAGACAGGCTCAACGAG
AGGTATGTTCCAGAGTTGAGAGTTTCAGTTATATGACTGAAAAAGTGAAAATTACAGTCTCCCACTGCTTCAGTGGTCGA
CGTGTTCACTAGCAGCCCCACCAAATCTGATCAGCTCTGATCCACCAGGTTCAATGAGCTCTGCGCCGTCTTGGAGCCCG
GGAAGCCACCCAAGGCCGACAAGGTCGCCATCCTCAGCGACGCCACCCGCCTCCTGGACCAGCTGCGCGCCGAGGCCCAG
AAGCTCAAGGCCTCCAACGAGTCACTCCAGGACTCCATCAAGAGCCTCAAGGTAAACCAGCAACTCGTCGCACTTTGCAC
CATTCATGGC----ACAGAAAAGCTCAGTGATCTTACGGTTCGATGTGGCTGTATGTATATAGTCCGAGAAGTCGGAGCT
GCGGGACGAGAAGACGCAGCTGAAGGCCGAGAGGGAGAGGCTGGAGCAGATGCTCAAGGGCGTCAGCGCG---GCCGCCG
CCGCGCCGCGGCAGTTCGTCCCGCACCCGGCCGCCGCGGCCGCGCCGCAGTTCCACCCGGCGGCGGCGTACGCGCACGCC
GGCAAGTTCGTCCCGGCGTACGCCGCGGGCTACCCGCCGCCGGCCGCGTTCTGGCAGTGGATACCGCCGACGTCGCTGGA
CACGTCCAAGGACCCCGCGCACTGGCCGCCGGTCGCGTGATTCATCAGCTCGATGACGCACGCGCGGCGGCGATCGTCGG
AGGATATGCGTGTGTTGAAGCTTGCTCGTACCGTAGAAGTTGACCAAAGCGCGCGCCCGGAGATAACGCCGGGTC-GCTG
ATGATTGTGTAGCGGTTGCTATGATTATGCTGTGGATATAATGATCCAGGGCTCGCCTGACGCGGGTTCCTGGTGATCAT
TGCTCATTGGAGCGGTCTGTGTAACAGCTCTAATGTGATAGCGATGAATATGGTTCATAATTATAGGGTCGATAGATGAT
GAT---GCTTATATAGGGAACGATGGAAATTGTGTCCTGCTTTGGATGGCATTAACGCAAATGTAGGAAGAATCATGCAC
GTGCAAGAAAAAACAAAATGATAATCGAGCTTAACGAAAAAGAGTGCATTGAGTTCTGATAATGCCGCTCTTCTACATTG
TAACCCAACTTTATTCAGGCAAGCTTACCGAAGGTGATTATTTACCATCAAATTAGTCCGCCTGGCCCTCAATGGCGCCC
TCGGCCATTTGTATGTTCCTCGCTGTTCTTCTGTCGTGACATTTGCAAGCTTAACGGCCATGGCTCTCGTTTGCTTGCGT
CGTGGTCGGGGATTCCTTGTTGGCTATTCGCATTGAAGTTGGAGTCACTTGCTCGGGGAGAGGCGATAATGTTGACAGTT
TGTGGACGGCCTTGGCGGTGTTTCTATCCTCAGTGGCATGTGTGGGTCTTGTAGGTAGCCAGATCAGCCGAAGATGCCCT
TTGTGGGCGTGTCTATTTACCATCAAATTAGTCCGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCGCCTGGCCCTCAATAGCGCCCTCGACCATT
TGTACGTTCCTCATTGTTTCTTCTACTGTGACATTTGCAAGCTTATCGGCGTGGCTGACATGGCTCTC-GTTTGCTCGTC
GTGGTCGGGGATTCCTTG-TTGGCTATTCGCACTGAAGTTGGAGTCACTTGCTCGGGGAGAAGTAATAGCAATGACA-TT
TGTGGACGGCCTTGGCAGTGTTTCTATCCTCGATGGCATGTGTGGGTCTTGTAGGTAGCTAGATCGGCCGAAGGTGCCCT
TTGTGGGCGTGTCGTAACGATT----------------------------------------------------------
--------------------------------------------------------------------------------
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------
>chr1D_1
CTAGCCATCGTCGTGTTGTAACGACGGCCTTTTCCGTCACGTT-CCCAAAGTCTCCGGGAACCTTTGCGAGCGAGGGGGC
AACGCCAACGCGAACGCAAACGCAACTGGAAAAGGGAGATAGATCGGATT-CCCGAACATAATCGTGGAGAAGAGAAGAG
A-----GGAGCTACGCGAACG-----------GGCAAAAAATCTGCCGCGCCCAAATCTTTTCGTCCTCTTGTGGCGTTG
CTCTCCGCTTCTTTTCGTTTTTTCACAGCGA-------------------------------------------CGTCGC
TCGCTGTAGCTCGACCAAGGGTATATGTACTGCCGTCCAGACGTGATTTTATTCTTC----TTGATTGAAAACGAGTGGA
AAGATGGGGTGATAG-TCGTGAGACGTGGCCGCAGGGCGTTCATGGCTGTGCTTCTCTCTCTCTCGGTGACCTGCACTGC
AGCTGATACGCCACGCTACGTAGCAGTACGTCCTCCTCACCGCTTGACTCGACAGTCCACACACACACAGCTCAACCCAA
GTGCTGGCCCAGCCCCACCGATCATATATACCAAACCAAAACACCCAGCAAAAACAAATCAAATCATTGCCAAAGCAAAC
AAACAATCTGACG------AAAGGAAGAAA----------------------------------AGGAGAACGGGCACGC
ACTGCGAAATCATTAATTAAAGAGTACTCGTTGCAAAGAACACTCCACTTTCCCAGGTCGCGACAAGTGGCGCACATGCA
GCGCGCCACTTGTTGCAACCTGGGAGTTTTCCCCTTTTTCATAGATCCGTTTATTCAAAACATTTTATCTCTTAAACCGT
GCGTCCAAATCTCGAACCGTTTTCACCATTGAATTTTTCGCGTCGAGATCTTTAAAACTAGGTCCCATGTTGACGGGTTT
TGACGAAATTTTTTTCACGAAAAAAAGGACGAAAAAATCGAACCGGGAGCACGGTTTTTTTCCCTTTCCGAAAGAGGCAC
GCCCGTGCCTCTCGCGAAATCAAAACTGTGCCTCTCGTGGAAGCAAAACCGTGACTCCCGTGGAAGGGAAAAAAAACAGA
AAATGAGTTTTTTTCGTTTCCGAGAGGCACGGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGAAAGCAAAACC
GTGACTCTCATGAAAGAAAAAAAACAGAAAACGCGTATTTTTTTCCCTTTTCGAGAGGCACGACCGTGACTTTCGCGTAA
GCACAACCGTGCCTCTCGCGGAAGCAAAACCGTGACTCTCACGAAAGAAAAAAAACAGAAAACGCGTTTTGTTTTTCCCT
TTCCGAGAGGCATGGCCGTGACTCTCGCGAAAGCACAACCGTGCCTCTCGTGGAAGCAAAACCGTGACTCTCGTGAAAGA
AAAAAAAAAACAGAAAACGAGTTTTTTTTTCATTTCCGAAAGGCACGGCCGTGACTCTCGATAAAGCACAACCGTGCCTC
TTGCGGAAGAAAACCGTGACTTTCGTGAAAGGAAAAAAAACGCATTTTTCACGCAAAAAAAATTCCAAAATTTTTTTGAT
CAAAAAGCTAAGAAATACCGGGGGAAAACCAAAACGTCGAAAAAAAAACCCGTTTAAAAAGCCGAAAACGCGTGCGGAAA
AATAAAAAAAATCGAAGAAAACGTCCAGAGCGCGACACGTGACGAATGGCTGAGAGCGCGCCAAGTGGCGCTGATCGTTG
CGAGGCTCCCGAAAGGAGCGCTCCTTAACTAGTTGCTCCCACGCACCGGGCACGGCACCGAGCAACAGAG----GGAGAA
TAAAAGGCGCACGCGTCCCGTCCCACTCAGCTCGCCGGATTTGAATAAGCCCAGCGGCCCAGCGATTGGCCCGCGCCCAC
GTCGTCGCATCTATCCTCCTCCTCCATCCTCGCGACAACAGT---------TGCGTGCTGCTTCGGTCGCGCCAAAAGCC
AGCGCCCAATATACATATGCGGATTATTGGTCACGACTAGTACTACTGGTTTTCCCCGGCGTCCCGATCTCTTTCGCCCG
CCTACCTC----CCCCGGCTCGTGCCATCCCCACGCCCGCCACAAGA-CCGGAAAGATCTGCCCCGGATAGCGGCGGGGA
GCGCTCCCGGTCCGCTGGGACTTCGGCCATGAGCTGCGGCGGCGTGGGGCAGGGCGGGTGGCTGCTGGACTACGGCCTCG
TGGAGGAGGAGATCCAGGCCTCCGACTTCATCTACATGGTCGACGACCCGCCGGTCTCCAGGTGAGCCAGCTCCCTTCCC
TGTTCCCTTCT---------------GAGGTC---------------GGGATTCTTGATGGTGGGCTGTGTTGCTCACTG
TCGGTGATCGGTCGAATATTCGGCTGGATGATGAACTTTTGCTTGCAGCGTCATACTGGGCTTCGATGCTCCCAGGAGGG
AGGACGCCGCGGCGGCTGCCCAGGACAACTCCGGCGCCAAGAAGAGGTACTG---GCTAATAATGTTCTTCTGCTCTACC
GAATTTGTTGCGAGTTTTGTGATCTGCTTGCTACTTTTGGTGCTCCTGTTTGGATCATTTGGGCCTCTCTGGTTAGATTG
ATTGATGAGAAGCGTAGAAGTGGTGGTTGAGAGAAGGCCAGTCTGTCTTTCTGGCCCCCTCTAGAGATAATAGTGGCCAC
CAAACTTGACTCGCGGAACACTCCAAAAGTGCCCGGTTGTTAGATTGCTGGAATCATCTGCAGACAATTTTGCA----TC
CAATAGATCAGCTCACAGCTAGATAAATTACACAAGGCTCAAAACTTTTGAGACAGGTTGAAGTTAGCTGACGACTTGAT
ATGTCTCTTCCTAGTTAGACCCAATTTTGGAACATCCAGATGTGGCTATTTTCCGCGTCCCCAAAATATAGCCTGAATTC
AGCTTAGTAGAAAGCCTGTCAGAATTAGCACGATTAGTCACTG---------------------ATCACTGATGCTAACT
GTCATGCAAATCACGAATCTTAAGACCCAAGCCTACTAAGCATGAGCCTAATCTGAAGATATAATTCTG--TATGTATCT
GCAGATCCCGTCCAGAGTCGAGCGCGCAGCCCGGCACCAAGGCATGCCGCGAGAAGCTCCGGCGAGACAGGCTCAACGAG
AGGTATGTTCCAAAGTTCAGAATTTCACTTCTACGACTGACAG--------TTACAGTCTCCCACTGCTTCAGTGGTCGA
CGTGTTCACTGGTAGCCCCACCAAAGCTGATCAGCTCTGATCCACCAGGTTCAGTGAGCTGTGCGCCGTTTTGGAGCCCG
GGAAGCCACCCAAGGCCGACAAGGTCGCCATCCTCAGCGACGCCACCCGCCTCCTGGACCAGCTGCGCGCCGAGGCCCAG
AAGCTCAAGGCCTCGAACGAGTCGCTCCAGGACTCCATCAAGAGCCTCAAGGTAAACCAGCAACGCGCTGCACTCTGCAC
CATTCATTCAGCGTACAGAAAAGCTCAG-GATCTCATGGTTCGATGTGGCTGTACGTATGCAGTCGGAGAAGTCGGAGCT
GCGGGACGAGAAGACGCAGCTGAAGGCCGAGAGGGAGAGGCTGGAGCAGATGCTCAAGGGCGTCAGCGCG---GCCGCGG
CCGCCCCGCGGCAGTACGTCCCGCACCCGGCCGCCGCGGCCGCGCCGCAGTTCCACCCCGCCGCGGCGTACGCGCACGCC
GGCAAGTTCGTCCCGGCGTACGCCGCGGGCTACCCGCCGCCGGCCGCGTTCTGGCAGTGGATACCGCCGACGTCGCTGGA
CACGTCCAAGGACCCCGCGCACTGGCCGCCGGTCGCGTGATTCATCAGCTCGATGACGCACGCACGGCGGCGATCGTCCG
AGGATATGCATGTGTTGAAGCTTGCTCGTACCGTAGAAGTTGACCAAAGCGCGCGCCCGGAGATAACGTCGGGTTTGCTG
ATGATTGTGTAGCGGTCTCTATGATTGTGCTGTGGATATAATGATCCAGGGCTCGCCTGATGCGGGTTCCTGGTGATCAT
TGCTCATTGGAGCAGTCTGTGTAACAGCTCTAATGTGATAGCGATGAATATGGTTCATAATTATAGGGTCGAT-------
GATGATGCTTATATAGGGAACGATGAAAATTGTGTCCTGCTTTGGATGGCATTAACGCAAATATAAGAAGAATCATGCAC
GTGCAAGAAAA--CAAAATGATAATCGAGCTTAACGAAAAAGAGCGCATTGAGTTTTGATAATGCCGCTCTTCTACATTG
TAACCCAACTTTACTCAAGCAAGCTTACCGAAGGTGATTATTTACCATCAAATTAGTC----------------------
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-------------------------------------------------CGCCTGGCCCTCAATAGCGCCCTCGACCATT
TGTATGTTCCTCACTGTTTCTTCTATCGTGACATTTGCAAGCTTATCGGCGTGGCCGACATGGCTTGCTCTC--------
-----CGGAGATTCCTTGGTTGGCTATTCGCAGTGAAGTTGGAGTCACTTGCTCGGGGAGGAGTGACAACGATGACAGTT
TGTGGACGGCCTTGGCGGTGTTTCTATCCTTGGTGGCATGTGTGGGTCTTGTAGGTAGCCAGATCGGCCGAAGGTGCCCT
CGAT----------------TTTTTTCTTGGTTTTCCGTAATTAGCCAGGTAATTCTCTTTTGAGCCCTTTGGACTTCTG
TTAAAAAAAA-GTGACGGGCAAGACGTTCAAGTTCAAGTAACAATCGGTA------------------------------
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------
>SNPs
--------------------------------------------------------------------------------
---------------S----S-----------------------------------------------------------
-SS-----------------------------------------------------------S-----------------
S--------S----------------------SSSSS---------SS--------S-S----SS---------------
-------S--------------------------------------------------------------------SS--
---------------S-------------------------------S-------S------------------S-----
---------------SSSSSSSS-------------------------------------------------S-------
------------S----S----------------------S------------------------------------S-S
-------S-----S---S--------------------------------------------------------------
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------S-----------------------------------------------------S-------------------
----------------------SS--SSS-S---------------------------------------------S---
-----------------------S----------SS------S--------------------------------S----
---------------S---------------------------S-S-S--------------------------------
--------------------S------------------------------S----------------------------
----------------------------------------------------------S---------------------
-S---S---------S--S----S-----S-SSSSSSSSSSSSSSSS---------------------------------
-----------------------------------------S------------------S-------------------
-------S-------------------------------------------SSSS-------------------------
--------------------------------------------------------------------------S-----
----------------S--------------S------------------------------SS----------------
----------S---S-----------------------------------------------------------------
----------S----------------------------S----------------------------------------
--------------------------------------------------------------------------------
S--S----S---------S--------S-----------------------S-------------S--------------
---------------------------SS-----------S---------------------------------------
-------------------------------------S-----S-----S------------------------------
----------------------------------------------------S-----------------------S---
--------------------------------------------------------------------------------
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--------------S-----------------------------------------------------------------
----------S------------------------------S--------S-----------------------------
----------------S-----------------------------------------------------SSS--S----
----------------------------------------------------------------S--S------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
------S--------------------------------------S----------------------------------
-----------------S-----------------------------------------------S--------------
------------------S-------------S-----------------------------------------------
------------------------------------------------S---------------------------S---
--------------------------------S--S-----S-S------------------------------------
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-------------S-------------S----------------------------------------------------
-------------------S-------S---------------------------S-------------S----------
-----------------------------S----S--------------------S------------------------
----------------S----------SS-S-----S-----------------------S-----------S-------
-S--------S-------S-------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_553
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-----------------------------------------------------CTCGACAGTCCACACAGCTT-------
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>reverse_3158
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-------------------------------------AAAGGCTTGCCGAGAGAAGC-----------------------
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>forward_654
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--------------------------------------------------------------------------GCACAG
CAAAGCAAAGCAAG------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_3562
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GGATGTGGCCGTATGTATGC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>forward_2461
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------TTTGCAGCGTCATACTGGGG-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>reverse_4988
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------CCGCACTGAAGTTGGAGTCA---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
