>input_sequence_47172
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------------------------------------------ATGGAAGCAGAATGGTTCTCGGGTATCAAGGCTGTCAC
CTCAACCGCCACGACAGTGGTATCTGGTTTAAATGATTGGATTGCTTTTCTTCAATGGTTCCAGCCAGACAAAACTTTGG
AGAATGGACAGCTGCAGGAGGAGCTCTGGAAACTCGAGACAACAATGCCAATGATGCAGGAAATGATCGATAAAGCAGAG
TGGTCAAGTCATAAGGACCCAGTAGCAAAACTTTTAGAAGAACTCAAGGGTGTCTTTTATGATAGTGAAGATACTCTTGA
TGATCTGAACTATTACGTGCTGAAATCAAAGATAGAGAAAGGTGCACTGCCAACAGATTTCACTAAGAGCACAGTCTGCT
GTGGCTTTGGTAAAGTGAAGGAACTGCAAAGAAGGGCCGAACATCTGATGACTCAGTTGAATTTCATGGTTTCACACAAC
GAGAGGCATTTTGTGAAGTCATTCAGGCCAGAAACAAGTTCTCTTCCAAATGAACCTAAGATCTTTGGCCGCCAAAAGGA
ATTGATGGAAATTATTCAATTGCTTGGCGTGCCAGTAAGCATCCATAGTGGTGGGAAAAGAAAAAACAGTAAAAGTGCAA
CTGATGCACTCAGCACCCAGGAAGCTTTCATTGATGATGCAAGAAATGAAGGTGTGGGTGTACTGGCTATAACTGGCATT
GGTGGTGTAGGTAAAACAACTTTGACACAACAAATCTACCATCATCCTCTGGTAGAAGCTCATTTCGACCAACAGCTTTG
GATATGTGTGTCCGATGACTTTGACGTTAAGAGATTGACAAAAGAGCTCGTACAGTCCTCAGGGGTGAAAGCATTGTCAG
ATAACCTGAATTCTCTCCAATCAATACTGGCTACTGCTGTCAAGTCTAAGCGGTTTCTGCTCGTGTTAGATGATATATGG
GACGATGTTCTGACTGAAAATGGACAAGAATGGGAGAACTTCTGTGCTCCTCTAACACGTGGGCTTCCAGGAAGCATTAT
CCTAGTGACTACCAGGTCTGTTAAGGTAGCTAAGAAAGTGTGCACAGTTGGGACTTTTCCACTAGAAGGTTTACAAGCTG
ATGCCTTCTGGGAGTTCTTCAGATCATGTGCATTCAATTGCAAGGGCTGCGAAAATAATGCAGATTTAGAAACCATTGCA
AGGAAGATTGTTCCCAAACTGAAAGGGTCTCCTCTAGCTGCCAAAACTCTTGGCCGGTTGCTAAGGGTGAATCATGACAT
TGAACATTGGAGAAATGTCTTAGATAGTGAGCTGTGGGAATTAAAGCAAGAAAAGGAGGAGATCTTGCCGGCTCTTAGAT
TGAGCTACATTTATCTGCCTTTCCGTTTAAAGAGGTGTTTCTCACTGTGTGCAATGTACCCAAAAGACCATGTCTTTCAG
ATGGAAGTTGCTGTTCACATATGGTGTGCCCAAGGTTTCGTGGAACCTCAAGGTCAAATTCCTCTTTCAGATATTGCGCG
TTCCTATTTTCAAGAACTTATAGACCGCTCACTCTTTCAAGAAGCTGCGGGGGCACCTGATACATACGTCATTCATGATT
TGATCCATGATATGCTCCAGTTAGTCTCAGCAAATGAAAGTTCGTCGTAA------------------------------
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>chr7D_1_TraesCS7D01G363800
TCTGCAGGATTTGGTGGTGCTAATGTGATTCCATGTATGAATTATTGCAGGCAAGGATTGGAACCC--TGAAGCAGCATC
GTATTGGCATCTCGAAGCTTCTCGGACCAAGTTGTGGTATCTGCAAACGCCAACCAAGGACAGGTGAGGCGTACGCTTTG
TTGGTCGCACGTCAAATTTTCACGAAGCTGTAGGCTAGGATGGTCCTACTGAAGCAAATTGTGCTGTTAGTTGAACGTCA
AATTTCCACGAAGCTGTAGGCTAGGGTTTTCTTTGGGTGGGGGGCTAGTACGATCCATGTTTGAATTGTAGAGGAAGGAT
TAAAGTTTCTTAAGCTATGATATCTGAAACGACTGGAGGCAGGTCAGGCGTACCCTGTGTTAGTCGCACTTCAAATTTCA
TGAAACTGTAGGCTAGGATGGTGCTTGTGAAGTGAATCCTGCTGGTGTGTCTTTGAAGTAGTGGTTATCCAGTTCGTCCT
CTATATTGCTTGAATGTCCTAACAGCTGTACGCTATAAGATTGTTCACCCGTCAGCAAATTACATGCCCAGTCTTCTTTT
ATTTAATGATCCAGCTTTGTGTTTTCAGATTGGCGGTTGTGTGTGTTGTCCTCTACTACACCCGTTTTCCCCTTCTACCT
GCTCATTTTTGTACTTCTGTTTTCTCTCCTTTTTCTTGTTATCTCTGCATCCATATTTAAGGTAGTGTTCGTTGCAACTC
CTATGATATGACAACTAGAAATTGAGGTATGGTATGGTGGAACTCATAAGTTTAGAATCTCCAGGCTTCATAAGCTATGT
GCTGAGCATCTGTAGTAACTGATTAACACTTCTTATGCTAGTATTTTGAATAGGCATTTAAACTAACAATTAAACGTGGT
TGGGAGCTTTGGAGTCACAGTTCACATTTTATTTTTTGCACAAGATATGAATAATCTATTTGGATGTGCTGTTTTGAAGG
AACTAAGAGATAAGAGTCTAATTGATAATTATATTTTACAGAATGGAAGCAGAATGGTTCTCGGGTATCAAGGCTGTCAC
CTCAACCGCCACGACAGTGGTATCTGGTTTAAATGATTGGATTGCTTTTCTTCAATGGTTCCAGCCAGACAAAACTTTGG
AGAATGGACAGCTGCAGGAGGAGCTCTGGAAACTCGAGACAACAATGCCAATGATGCAGGAAATGATCGATAAAGCAGAG
TGGTCAAGTCATAAGGACCCAGTAGCAAAACTTTTAGAAGAACTCAAGGGTGTCTTTTATGATAGTGAAGATACTCTTGA
TGATCTGAACTATTACGTGCTGAAATCAAAGATAGAGAAAGGTGCACTGCCAACAGATTTCACTAAGAGCACAGTCTGCT
GTGGCTTTGGTAAAGTGAAGGAACTGCAAAGAAGGGCCGAACATCTGATGACTCAGTTGAATTTCATGGTTTCACACAAC
GAGAGGCATTTTGTGAAGTCATTCAGGCCAGAAACAAGTTCTCTTCCAAATGAACCTAAGATCTTTGGCCGCCAAAAGGA
ATTGATGGAAATTATTCAATTGCTTGGCGTGCCAGTAAGCATCCATAGTGGTGGGAAAAGAAAAAACAGTAAAAGTGCAA
CTGATGCACTCAGCACCCAGGAAGCTTTCATTGATGATGCAAGAAATGAAGGTGTGGGTGTACTGGCTATAACTGGCATT
GGTGGTGTAGGTAAAACAACTTTGACACAACAAATCTACCATCATCCTCTGGTAGAAGCTCATTTCGACCAACAGCTTTG
GATATGTGTGTCCGATGACTTTGACGTTAAGAGATTGACAAAAGAGCTCGTACAGTCCTCAGGGGTGAAAGCATTGTCAG
ATAACCTGAATTCTCTCCAATCAATACTGGCTACTGCTGTCAAGTCTAAGCGGTTTCTGCTCGTGTTAGATGATATATGG
GACGATGTTCTGACTGAAAATGGACAAGAATGGGAGAACTTCTGTGCTCCTCTAACACGTGGGCTTCCAGGAAGCATTAT
CCTAGTGACTACCAGGTCTGTTAAGGTAGCTAAGAAAGTGTGCACAGTTGGGACTTTTCCACTAGAAGGTTTACAAGCTG
ATGCCTTCTGGGAGTTCTTCAGATCATGTGCATTCAATTGCAAGGGCTGCGAAAATAATGCAGATTTAGAAACCATTGCA
AGGAAGATTGTTCCCAAACTGAAAGGGTCTCCTCTAGCTGCCAAAACTCTTGGCCGGTTGCTAAGGGTGAATCATGACAT
TGAACATTGGAGAAATGTCTTAGATAGTGAGCTGTGGGAATTAAAGCAAGAAAAGGAGGAGATCTTGCCGGCTCTTAGAT
TGAGCTACATTTATCTGCCTTTCCGTTTAAAGAGGTGTTTCTCACTGTGTGCAATGTACCCAAAAGACCATGTCTTTCAG
ATGGAAGTTGCTGTTCACATATGGTGTGCCCAAGGTTTCGTGGAACCTCAAGGTCAAATTCCTCTTTCAGATATTGCGCG
TTCCTATTTTCAAGAACTTATAGACCGCTCACTCTTTCAAGAAGCTGCGGGGGCACCTGATACATACGTCATTCATGATT
TGATCCATGATATGCTCCAGTTAGTCTCAGCAAATGAAAGTT-CGTCGTAAGAAATGAATATGACCTTCTAAATGTTCCT
CAAAATGTCCGGCATTTGTCACTGTTCACAGAGAAGAATTTTGATTCCAAAAGATTTATGATTCTATCTCAGCACAAGAA
GCTGCGGACAATTTTTATCAATGAATCATTGAACCAGACTGCTCTTATTCCTATAATTGACTGTTGGTCCAGTGCCTTGA
AATATCTCCGTTTTCTGTCTTGTGGCTTTAATGCTATAAAGGTGCTGCCTGAGACTGTTGCTCGTTTTAAGCTTCTGAGG
TGCTTAAAGTTTGGAAGCTCCAGGACTTGTACTTTTCATACATTCCCAGAGTCATACTGTTGCCTTTATAATCTGCAAAC
GTTCGTGGGGCTAGGCTTCATATTCCAGAACTTACCAAGGAACTTCACTAGACTTGTCAACTTGCAGCACTTCAGAATTA
ATACTCTTACTCATCAGAGACACTGCACACTATATTCTGTTCCTTCCGAGTTCGCCCATATCAGATTGCTAAGGTACATG
AATCTTAAGGGAGAACTGAATCTGGAAGGCATGTCCTATCTGCAACCAAATGATGTACAACAGCTCGAAATGAGCAAAAG
AAAGGATATTCGGAAACTAATATTAGCTTTTGACCAGGGTAGGGGCACCTCTGATAGTGATATGGAAGTTCTTGAGGCTC
TTTGCCCCCATCCAGATGTTATTCAGTGCCTGGATATCAAGTATTTCAAAGGCGACTTAAATCCTACTTGGTTTAAGCCA
TCAAACCTGCAGAGCTTAATGCAGCTCCAGTTCATAACATGTGATATACGTACAGTATCTTGGGGTGGTGACCATGCTGG
CACTATGTTCTCAGCTCTCACTTTTTTGAACATTTCTATGTGCAGCAGACTGTCTTCGCTTGAACAACTTCTACAGGCAC
CTGGTCTTCCAGCAATCAGAATAATTAGTATTGACCGTTGCCCAGAGTTGGTGAACCTTTTTGTTGAAACCTTTAAAGCT
TTTGAATGTCT
>chr7B_1
TCTGCAGGATTTGGTGGTGCTAATGTGATTCCATGTATGAATTATTGCAGGCAAGGATTGGAACCCCCTGAAGCAGCATC
TTATTGGCATCTCGAAGCTTCTCGGACCAAGTTGTGGTATCTGCAAACGCCAACTAAGGACAGGTGAGGCGTCCGCTTTG
TTGGTCGCACGTCAAATTTTCACGAAGCTGTAGGCTAGGATGGTCCTACTGAAGCAAATTGTGCTGTTAGTTGAACGTCA
AATTTCCACGAAGCTGTAGGCTAGGGTTTTCTTTGGGTGGGGGGCTAGTACGATCCATGTTTGAATTGTAGAGGAAGGAT
TGAAGTTTCTTAAGCTATGATATCTGAAACGACTGGAGGCAGGTCAGGCGTACCCTGTGTTAGTCGCACTTCAAATTTCA
TGAAACTGTAGACTAGGATGGTCCTTGTGAAGTGAATCCTGCTGGTGTGTCTTTGAAGTAGTGGTTATCCAGTTCGTCCT
GTATATTGCTTGAATGTCCTAACAGCTGTACGCTATAAGATTGTTCACCCGTCAGCAAATTACATGCCCAGTCTTCTTTT
ATTTAATGATCCAGCTTTGTGTTTTCAGATTGGCGGTTGTGTGTGTTGTCCTCTACTACACCCGTTTTCCCCTTCTACCT
GCTCATTTTTGTACTTCTGTTTCTT-TCCTTTTTCTTGTTATCTCTGCATCCATATTTAAGGTAGTGTTCGTTGCAACTC
CTATGATATGACAACTAGAAATTGAGGTATGGTATGGTGGAACTCATAAGTTTAGAATCTCCAGGCTTCATAAGCTATGT
GCTGAGCATCTGTAGTAACTGATTAACACTTCTTATGCTAGTATTTTGAATAGGCATTTAAACTAACAATTAAACGTGGT
TGAGAGCTTTGGAGTCACAGTTCACATTTTATTTTTTGCACAAGATATGAATAATCTATTTGGATGTGCTGTTTTGAAGG
AACTAAGAGATAAGAGTCTAATTGATAATTATATTTTACAGAATGGAAGCAGAATGGTTCTCGGGTATCAAGGCTGTCAC
CTCAACCGCCACGACAGTGGTATCTGGTTTAAATGATTGGATTGCTTTTCTTCAATGGTTCCAGCCAGACAAAACTTTGG
AGAATGGACAGCTGCAGGAGGAGCTCTGGAAACTCGAGACAACAATGCCAATGATGCAGGAAATGACCGATAAAGCAGAG
TGGTCAAGTCATAAGGACCCAGTAGCAAAACTTTTAGAAGAACTCAAGAGTGTCTTTTATGATAGTGAAGATACTCTTGA
TGATCTGAACTATTACGTGCTGAAATCAAAGA-AGAGAAAGGTGCACTGCCAACAGATTTCACTAAGAGCACAGTCTGCT
GTGGCTTTGGTAAAGTGAAGGAACTGCAAAGAAGGGCCGAACATCTGATAACTCAGTTGAATTTCATGGTTTCACACAAC
GAGAGGCATTTTGTGAAGTCATTCAGGCCAGAAACAAGTTCTCTTCCAAATGAACCTAAGATCTTTGGCCGCCAAAAGGA
ATTGATGGAAATTATTCAATTGCTTGGCGTGCCAGTAAGCATCCATAGTGGTGGGAAAAGAAAAAACAGTAAAAGTGCAA
CTGATGCACTCAGCACCCAGGAAGCTTTCATTGATGATGCAAGAAATGAAGGTGTGGGTGTACTGGCTTTAACTGGCATT
GGTGGTGTAGGTAAAACAACTTTGACACAACAAATCTACCATCATCCTCTGGTAGAAGCTCATTTCAACCAACAGCTTTG
GATATGTGTGTCCGATGACTTTGACGTTAAGAGATTGACAAAAGAGCTCGTACAGTCCTCAGGGGAGAAAGCATTGTCAG
ATAACCTGAATTCTCTCCAATCAATACTGGCTACTGCTGTCAAGTCTAAGCGGTTTCTGCTCGTGTTAGATGATATATGG
GACGATGTTCTGACTGAAAATGGACAGGAATGGGAGAACTTCTGTGCTCCTCTAACACGTGGGCTTCCAGGAAGCATTAT
CCTAGTGACTACCAGGTCTGTTAAGGTAGCTAAGAAAGTGTGCACAGTTGGGACTTTTCCACTAGAAGGTTTACAAGCTG
ATGCCTTCTGGGAGTTCT-CAGATCATGTGCATTCAATTGCAAGGGCTGCAAAAATGATGCAGATTTAGAAACCATTGCA
AGGAAGATTGTTCCCAAACTGAAAGGGTCTCCTCTAGCTGCCAAAACTCTTGGCCGGTTGCTAAGGGTGAATCATGACAT
TGAACATTGGAGAAATGTCTTAGATAGTGAGCTTTGGGAATTAAAGCAAGAAAAGGAGGAGATCTTGCCGGCTCTTAGAT
TGAGCTACATTTATCTGCCTTTCCGTTTGAAGAGGTGTTTCTCACTGTGTGCAATGTACCCAAAAGACCATGTCTTTCAG
ATGGAAGTTGCTGTTCACATATGGTGTGCCCAAGGTTTCGTGGAACCTCAAGGTCAAATTCCTCTTTCAGATATTGCGCG
TTCCTATTTTCAAGAACTTATAGACCGCTCACTCTTTCAAGAAGCTGAGGGGGCACCTGATGCATACGTCATTCATGATT
TGATCCATGATATGCTCCAGTTAGTCTCAGCAAATGAAAGTTTCGTCGTAAGAAATGAATATGACCTTCTAAATGTTCCT
CAAAATGTCCGGCATTTGTCACTGTTCACAGAGGAGAATTTTGATTCCAAAAGATTTATGATTCTATCTCAGCACAAGAA
GCTGCGGACAATTTTTATCAAGGAATCATTGAACCAGACTGCTCTTATTCCTGTAATTGACTGTTGGTCCAGTGCCTTGA
AATATCTCCGTTTTCTGTCTTGTGGCTTTAATGCTATAAAGGTGCTGCCTGAGACTGTTGCTCGTTTTAAGCTTCTGAGG
TGCTTAAAGTTTGGAAGCTCCAGGACTTGTACTTTTCATACATTCCCAGAGTCATACTGTTGCCTTTATAATCTGCAAAC
GTTCGTGGGGCTAAGCTTCATATTCCAGAACTTACCAAGGAACTTCACTAGACTTGTCAACTTGCAGCACTTCAGAATTA
ATACTCTTACTCATCAGAGACACTGCACACTATATTCTGTTCCTTCCGAGTTCTCCCATATCAGATTGCTAAGGTACATG
AATCTTAAGGGAGAACTGAATCTGGAAGGCATGTCCTATCTGCAACCAAATGATGTACAACAGCTCGAAATGAGCAAAAG
AAAGGATATTCGGAAACTAATATTAGCTTTTGACCAGCGTAGGGGCACCTCTGATAGTGATATGGAAGTTCTTGAGGCTC
TTTGCCCCCATCCAGATGTCATTCAGTGCCTGGATATCAAGTATTTCAAAGGCGACTTAAATCCTACTTGGTTTAAGCCA
TCAAACCTGCAGAGCTTAATGCAGCTCCACTTCATAACATGTGATATACGTACAGTATCTTGGGGTGGTGACCATGCTGG
CACTATGTTCTCAGCTCTCACTTTTTTGAACATTTCTATGTGCAGCAGACTGTCTTCGCTTGAACAACTTCTACAGGCAC
CTGGTCTTCCAGCAATCAGAATAATTAGTATTGACCGTTGCCCAGAGTTGGTGAACCTTCCTGTTGAAACCTTTGAAGCT
TTTGAATGTCT
>SNPs
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S-----------------------------------------------------S-----------------S-------
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-S------------------------------------------------------------------------------
-----------S----------S---------------------------------------------------------
S-------------------------------------------------------------------------------
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----------------------SS-S------------------------------------------------------
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--S-----------------------------------------------------------------------------
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------------------------------------------------------------------S-------------
------------------------------------------------S-------------------------------
--------------------------------S-----------------------------------------------
-------------------------------------------------S------------------------------
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--------------------------------------------------------------------S-----------
------------------------------------------------------------------S-------------
-----------------------------------------------------------------S--------------
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--------------------------S-----------------------------------------------------
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------------------S-------------------------------S-----S-----------------------
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---------------------------------S----------------------------------------------
----------------------------S---------------------------------------------------
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-----------------------------------------------S-------------S------------------
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---------------------------------S----------------------------------------------
---------------------S------------------------------S---------------------------
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-------------S------------------------------------------------------------------
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-------------------S------------------------------------------------------------
-----------------------------S--------------------------------------------------
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-----------------------------------------------------------SS-------------S-----
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>forward_135
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-----------------------------------GGTATCTGCAAACGCCAACC-------------------------
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>reverse_1313
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--------------------------------TAGAGAAAGGTGCACTGCCA----------------------------
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>forward_153
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-----------------------------------------------------CCAAGGACAGGTGAGGCGTA-------
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>reverse_1669
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--------------------------------------------------------------------ATAACTGGCATT
GGTGGTGT------------------------------------------------------------------------
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>forward_1410
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-----------------------------AGAAGGGCCGAACATCTGATG------------------------------
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>reverse_2528
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-----------------------------------------------CGGGGGCACCTGATACATAC-------------
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>forward_1669
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-------------------------------------------------AGGTGTGGGTGTACTGGCTA-----------
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>reverse_3238
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-------------------------------------GGTAGGGGCACCTCTGATAG-----------------------
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