>input_sequence_20238
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-ATGGAACAAATTTCGGTGAGTTACTTCCTTCTGTTCATTAAAATCCTCTTGAAACTGAATGATTTCATAGTTATAACTT
GTGATCAACAACCAAAATTCTGAAGCACTGTTTTTTTTCCCTTTTTCTTTTCTT-GAAATTGTCTATAGCTTGGGCATCG
ATATAAGGAGTGCAGGCCACAAAGGACTAGCAGCTGTCCAGCTAAACTACTTGTTGGGAAGGATGTACTGAAAGAATTGG
AGGAAAGACGGTCATCCCCCAGTGTGGTCGCAAAACTGATGGGAATTGACGTATTGCCACCTACTTACGTAGCCCATAAA
AGACATCAACAATTCAAGGATGTCTTTGAAGTGTCGGAGGAGCTACCGGAGACTTTCACAAAAGAGATGTCGTATCATTG
CCCTAAAGGTCTGCCAAGCTTGAAGAGGAGTGCAATGAAATTGAAAAAGCTTATGCCGTCAAAGTCTCCCTATTGTGATG
GAACATTTGATAATGACGTGGAGTACAACAATGGCTTGGATCGCTTGAACCCACTTGAAATAGACAATCCTTTGTTTGAG
AAGTGCCCCCGCGATGTGAATTATTCCCCAAATAATCAACATGAGAAAGATATCACAGGCACTTTCAGGAAGTACCCAGT
GGGTTTAGCTAATTCCTCACTTAAAGATATAAAAGATCTGCCGAGAGGGAATTACGGAGATTTCAACAACATTGTCGTTC
TGGAGCCTGGCTTGGGAAACAGCCATGATCCAGAGAACTCTTTTTCCATGTCGTTGCTCTCTCATGACAATTGCAATTCC
AGGAGAAATAGGAAGAAGAAGTTGGCTGAGTCTGTTGTAATGAGCAATGAGAGAGTTTCACAACATCTTTCAGATACTGT
TAATGTGGCTAGAATAAAAAGAGAAAGATACTTGACTAGTGATGCCATCAATTCTCTGTCAAAAGGAGAGGAGCCATCAT
TTGATCAATTCAACATCATAGATATGAATAGCACCGGATCATTTCAGATGTATTCTGGAGGTGACATTAACTCCAGGCAA
AACAACAAGCCATCATCAAGTAGCTTACCTGGGAAATCCTTTCGGAAGTATGATGAAGGTGATGTCGGATCGAGAACTCT
TGCACAGATGTTTGCTTTATCTGATTCAGAGAGGGTAAAGAAAAATTTGAACCCGCATGCTCAGATTCAACACAGTAAAC
TTGACCAGGGCAAAGGCCACAACAGGGAAGGATGCTTTATAGTTTTACCAAAGCATGGATCTCCACTGTCTCTTCACACC
TCATTGGACAGGAGTTCTTCCTGCGAAGGGTCTCCTAACAGTGAAATTTTCCCAGATCCTTCAGTTAGTTACAACAACGG
CAAGGTTACCTTTGATTCTTTTCTGGCCAAACGAAGGCTCAAGCAAATTGCCAGCGGGAGGCAAAATAACTTAAGGAATG
CTTCTGTGGTAAAAAGTCTTGCCTTGGAGCAGCGGAGACCTGCTTCTCCTTCTCTTGATGATTTCAGGTGTCATTCATGG
CGTCCATCTGATAATGTTTCAACTTCTGACTGCATAAATGAGAGATTATTGTTCGCGACAGATGAGGGCTTAATCCACGA
GCCTGCTGAAACTGTGCCTTCTGCGTTTCAATTGCAATTATCTAGGAAACAGAAGGTCTGAACTTTGTGCGCCATGAATT
TAGCAAAGTAAAACAAAACATAATATTCTTGCATGTTGCATACT-TTCTGTTGTTTCAACGAATCAAGAATAAAATAGCG
AAAAATTTCTCTACTATTAACAATTTAACATAGAAGCATGAACAATCCAATTCCTCTGCAATAATAAGTGTTCAACTGCT
GCTTTGAATCATACTCCTATTTCATAATTTTCTTATTATCATGAGGATGTGTTTCTTCCGTCATTAAAAAAAAATCAAGT
GTTTTCTGACAAGATAAAAGAACTCTGTGAACTCAATTCACTCACTCAGAATCATTGTAATGAGACTGTTTCAGTTATTG
ATCCTGAATTATATGCAATTCATGATATTTTTTCTTTAACATTAATATGTTTTCTAAGTTCTATTTTTTCATGATATCAG
ATGTGCATTGTTCCACTATAGTAGAGTACTTGTTGTTATGTCATATTTAAACTTCATCATTTTCCCCACTAACTATGTAG
ACTCTAATGCAACTTTCATCAT--------TTTAGATTGTTAAATCTTTTCATTCTGATACCATGAAGCCTAAGTTTATG
GTGCACAGCTCTTCAAGTCGTTTCCCTATCTTTTTTAGGTTTCAGCAACGCCTTTGCAGTGTCATGACTATGAATCCATA
TCTATTTCTAATCATGATGATCTGGCAAAGTCTCGTAAAGGATTGGAAGAGTTTGAGCAGCCGAGCCCAGTGTCCATTCT
ACAGCCCCCAACTGATGAAGACAGTTGCTGTTCTGGATTCTTCAAGAATGACTTGCAAGACATGCCCAGTAAGACAACAA
TATAGCTAGAAGGCTGTACTGCATAGACTAGGGCTTGTGTCTTTTTGTAGTACATTGCCAGCTCTACTAAACTGCGAAGT
TAATACAAACAATCATTAAATTAAGCTATATAC-------TTACGACATAGCATCTGATAAACATTATTGCTAACTCACA
CATTGCAACATGATGTTCAAACAAAGAATTTAGGTGTATAGTTAAGTTGAGTTTTAAATCACTTCTTTTAGTATGCCAAA
AATGTTGTGAGGAGTGCAGCTATTTACGAGAATTGCACAAAAGATTTGTTTACAGAATTTTTGCATCATGCATTCATTAA
CTGGAACTTCTTTATTAACCTCAGGTGTGGAGACACAAATGGACCATCGTCGATTCCGAGATGAACCTGAAGTCTCCTCC
ATGTCATGTGATGATGGCAATGATTCTTCTTACAAATCTTTGGAAGCATTTCAGGTTGAGGAGGACAGGGACTTCTCATA
TCTCCTTGATATTCTTATAAGCTCTGGTATGATAGTTTCAACTGACTGGCAGCTCTTGTGCAAGTCATGGCACTCATCTA
GTTTCCCTGTTGGTCCCCAAGTCTTTGAGAGGCTTGAGAGCAAGTACGCCAAAATGACTTCATGGCCAAAGCCAAAGAGG
AGACTTATGTTTGATCTTGCAAATTCTGTTCTCTCCGATGTCCTTGCACCTTGCACCAATATACACCCATGGGTGAGTTC
TACTAGACAGTGCAGGCCTATCTGGGGCCCTGAAGGGCCTGTTGAGAAGGTTTGGCAAATGATGGTTAGGCAGCAGGAGG
AGCTGGCGATAGGGCATCCTGATGACAAGGTTCTGGATCCAAACTGGCTGCAAGCTGATGATGACATATATGCGGTGGGC
AACCAGATAGCCGTCATGTTACATGCTGACCTCTTGGAAGAAGTCATATTGGAATTCCTCTCACTCTCAGGGTCGGCCGC
TGCATGTATGTAG-------------------------------------------------------------------
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>chr4D_1_TraesCS4D01G029300
TGTACTACTCCATTCTAAGATCGATCTATACCTACACACACACACATCCAACAGAGAACAACTGCAATTGATAAGCTGAC
AAGCCACATTCAGAAGGCCAGTCTGCAACTGCACACACGCCTAGTTTAATCTCGTTCGGGTTGTGATTTTCTCTGGCGCA
TTAGTTTATTTCCTCAGAGAATGCCACTTTCTCGGAAAGAGGCTTTCTGGTGCT-GCACCTAGAAAGGCATATCCAGTAT
TGAGTTCAGCACTTTTATCCCTTTTTGGCTTTTTGCTTTACTTACGTACGGTTCATACTGTTGTTTTTAGTGCCCCTTGC
CTACAATATAGCATCACAATGTGCTTGTAGTCGTCGCTAGGTAGTCTACGAACCTGGATGTA-TTTTTTACTTCTAGTGT
TTTTTGTACTACCTTGACAGATGATGAATAGATCGGAAGTTTTCTCCGCAAAAATAAATAAATATAGCATCACAATGCTA
CAGTTTGTATATGTCTTTTGGAGTTGAGTTGTTAGCATGTCACAGTTCGTGTACTGGTTTTAATGGATTCCTT----TAC
GCAAAAAATAGCTCTTCATATGTACAGATCTACTTTGCATGCAGTACATAGCCTATGTTTCCGACGCCTTACTGTGCTTT
CTCACCATGCTCCAAGCGCAGAGTTATGCCGTTGTGTTTCTGTAGTAGCTAGTCTGAGTTCTGACATGGCATTGTGGAGC
AATGGAAAGCTCAGAGATAGATGAGGAGTAGATTTCCTAATTAAGTAAGCTGATAATATCGATTTCACAGTGACGGCAAG
TTTACTGGCTTGCTAGTCACATTTAGAATTTGTTTGATGCAGAAAAATCAAAGACTTCGAGTGCCACTATGTGTTAATTT
TATCTCTCCATCTTATGTGCATTCTTTAAATCTT--------------------------------TGTTCCATGTATAT
CTGCAGGCACAAAGCACTTGACTTGAGACGAATATCAGAACCTCTC---TTAGTTGATTCTCCATATAGTCACTCTTCAA
GATGGAACAAATTTCGGTGAGTTACTTCCTTCTGTTCATTAAAATCCTCTTGAAACTGAATGATTTCATAGTTATAACTT
GTGATCAACAACCAAAATTCTGAAGCACTGTTTTTTTTCCCTTTTTCTTTTCTT-GAAATTGTCTATAGCTTGGGCATCG
ATATAAGGAGTGCAGGCCACAAAGGACTAGCAGCTGTCCAGCTAAACTACTTGTTGGGAAGGATGTACTGAAAGAATTGG
AGGAAAGACGGTCATCCCCCAGTGTGGTCGCAAAACTGATGGGAATTGACGTATTGCCACCTACTTACGTAGCCCATAAA
AGACATCAACAATTCAAGGATGTCTTTGAAGTGTCGGAGGAGCTACCGGAGACTTTCACAAAAGAGATGTCGTATCATTG
CCCTAAAGGTCTGCCAAGCTTGAAGAGGAGTGCAATGAAATTGAAAAAGCTTATGCCGTCAAAGTCTCCCTATTGTGATG
GAACATTTGATAATGACGTGGAGTACAACAATGGCTTGGATCGCTTGAACCCACTTGAAATAGACAATCCTTTGTTTGAG
AAGTGCCCCCGCGATGTGAATTATTCCCCAAATAATCAACATGAGAAAGATATCACAGGCACTTTCAGGAAGTACCCAGT
GGGTTTAGCTAATTCCTCACTTAAAGATATAAAAGATCTGCCGAGAGGGAATTACGGAGATTTCAACAACATTGTCGTTC
TGGAGCCTGGCTTGGGAAACAGCCATGATCCAGAGAACTCTTTTTCCATGTCGTTGCTCTCTCATGACAATTGCAATTCC
AGGAGAAATAGGAAGAAGAAGTTGGCTGAGTCTGTTGTAATGAGCAATGAGAGAGTTTCACAACATCTTTCAGATACTGT
TAATGTGGCTAGAATAAAAAGAGAAAGATACTTGACTAGTGATGCCATCAATTCTCTGTCAAAAGGAGAGGAGCCATCAT
TTGATCAATTCAACATCATAGATATGAATAGCACCGGATCATTTCAGATGTATTCTGGAGGTGACATTAACTCCAGGCAA
AACAACAAGCCATCATCAAGTAGCTTACCTGGGAAATCCTTTCGGAAGTATGATGAAGGTGATGTCGGATCGAGAACTCT
TGCACAGATGTTTGCTTTATCTGATTCAGAGAGGGTAAAGAAAAATTTGAACCCGCATGCTCAGATTCAACACAGTAAAC
TTGACCAGGGCAAAGGCCACAACAGGGAAGGATGCTTTATAGTTTTACCAAAGCATGGATCTCCACTGTCTCTTCACACC
TCATTGGACAGGAGTTCTTCCTGCGAAGGGTCTCCTAACAGTGAAATTTTCCCAGATCCTTCAGTTAGTTACAACAACGG
CAAGGTTACCTTTGATTCTTTTCTGGCCAAACGAAGGCTCAAGCAAATTGCCAGCGGGAGGCAAAATAACTTAAGGAATG
CTTCTGTGGTAAAAAGTCTTGCCTTGGAGCAGCGGAGACCTGCTTCTCCTTCTCTTGATGATTTCAGGTGTCATTCATGG
CGTCCATCTGATAATGTTTCAACTTCTGACTGCATAAATGAGAGATTATTGTTCGCGACAGATGAGGGCTTAATCCACGA
GCCTGCTGAAACTGTGCCTTCTGCGTTTCAATTGCAATTATCTAGGAAACAGAAGGTCTGAACTTTGTGCGCCATGAATT
TAGCAAAGTAAAACAAAACATAATATTCTTGCATGTTGCATACT-TTCTGTTGTTTCAACGAATCAAGAATAAAATAGCG
AAAAATTTCTCTACTATTAACAATTTAACATAGAAGCATGAACAATCCAATTCCTCTGCAATAATAAGTGTTCAACTGCT
GCTTTGAATCATACTCCTATTTCATAATTTTCTTATTATCATGAGGATGTGTTTCTTCCGTCATTAAAAAAAAATCAAGT
GTTTTCTGACAAGATAAAAGAACTCTGTGAACTCAATTCACTCACTCAGAATCATTGTAATGAGACTGTTTCAGTTATTG
ATCCTGAATTATATGCAATTCATGATATTTTTTCTTTAACATTAATATGTTTTCTAAGTTCTATTTTTTCATGATATCAG
ATGTGCATTGTTCCACTATAGTAGAGTACTTGTTGTTATGTCATATTTAAACTTCATCATTTTCCCCACTAACTATGTAG
ACTCTAATGCAACTTTCATCAT--------TTTAGATTGTTAAATCTTTTCATTCTGATACCATGAAGCCTAAGTTTATG
GTGCACAGCTCTTCAAGTCGTTTCCCTATCTTTTTTAGGTTTCAGCAACGCCTTTGCAGTGTCATGACTATGAATCCATA
TCTATTTCTAATCATGATGATCTGGCAAAGTCTCGTAAAGGATTGGAAGAGTTTGAGCAGCCGAGCCCAGTGTCCATTCT
ACAGCCCCCAACTGATGAAGACAGTTGCTGTTCTGGATTCTTCAAGAATGACTTGCAAGACATGCCCAGTAAGACAACAA
TATAGCTAGAAGGCTGTACTGCATAGACTAGGGCTTGTGTCTTTTTGTAGTACATTGCCAGCTCTACTAAACTGCGAAGT
TAATACAAACAATCATTAAATTAAGCTATATAC-------TTACGACATAGCATCTGATAAACATTATTGCTAACTCACA
CATTGCAACATGATGTTCAAACAAAGAATTTAGGTGTATAGTTAAGTTGAGTTTTAAATCACTTCTTTTAGTATGCCAAA
AATGTTGTGAGGAGTGCAGCTATTTACGAGAATTGCACAAAAGATTTGTTTACAGAATTTTTGCATCATGCATTCATTAA
CTGGAACTTCTTTATTAACCTCAGGTGTGGAGACACAAATGGACCATCGTCGATTCCGAGATGAACCTGAAGTCTCCTCC
ATGTCATGTGATGATGGCAATGATTCTTCTTACAAATCTTTGGAAGCATTTCAGGTTGAGGAGGACAGGGACTTCTCATA
TCTCCTTGATATTCTTATAAGCTCTGGTATGATAGTTTCAACTGACTGGCAGCTCTTGTGCAAGTCATGGCACTCATCTA
GTTTCCCTGTTGGTCCCCAAGTCTTTGAGAGGCTTGAGAGCAAGTACGCCAAAATGACTTCATGGCCAAAGCCAAAGAGG
AGACTTATGTTTGATCTTGCAAATTCTGTTCTCTCCGATGTCCTTGCACCTTGCACCAATATACACCCATGGGTGAGTTC
TACTAGACAGTGCAGGCCTATCTGGGGCCCTGAAGGGCCTGTTGAGAAGGTTTGGCAAATGATGGTTAGGCAGCAGGAGG
AGCTGGCGATAGGGCATCCTGATGACAAGGTTCTGGATCCAAACTGGCTGCAAGCTGATGATGACATATATGCGGTGGGC
AACCAGATAGCCGTCATGTTACATGCTGACCTCTTGGAAGAAGTCATATTGGAATTCCTCTCACTCTCAGGGTCGGCCGC
TGCATGTATGTAGATCAAATTGACGAAACTCAGTCTATCGCAAGAACATCGCAAGAAAGTACAGTGACAAGTCTGAGTTA
GTTTTTCCATGAACAATCTTCAAGCGTATATGCTGTTCTAAGCGTTAATGTTTGTTGCCTTCGAAGAAGTGCACAGATGT
AAGGCTTGTTGATACAGACGCAACAGTTTTTT--TAGTCTATGATATAATTATTATGTCACTTGATACTGGACAATTTCT
GCCCATGAGGAATTTAAAGTAGAATTCTTTACCGAGCTCTCTGATTTTTGTAACAATATAGATTGCCCATATATGGGAGG
GGATTTCAATATTCCAAGACATGCTGGTGAAGAAAACAAGGCTGAGTTTTTTTATGAACAATCTTTCAGCGTATATGCTG
TAATCAAGCGGTGCTGTTGCCTTTGAAGTGCACAGGCGTAAGGCTTGTTGATACAGACGCAACATTTTTTCGGGTCTGAT
ATACTAGTAATATGCCACTAGATACTGGACAATTTTCTTCTTTGAAACAGTAACGAACATGTGCTGGGGTGGGATTGATG
GTAGAAATTTGATCATTCCGCTTTGAGATTTGTTTTGTTTTACCGGTGAAAACAGTAGGAGATGCTCCCACTATTGTA--
-TACTCGCTCCGTCCGGAATTACTTGTCGCGGAAATGGATGTATCTAAATGTATTTTTAGTTCTAGATACATTTTTATGA
CAAATAATTCAGGATGATGGGAATATTAAATTAGCAGAGTATTTACATGTCCCGTGCAAAAAAAGAAGAAAAGTATTTAC
ATATCCTCAAAGAGGTACAGGAGGCTAACAGGAAACTATAAAAGGTAGTTAAGCCTACAAAGAAGAGATGAAATTGCCAA
CAAATTCAGCAAGCTCTGGTTTTACTCTAAGAGCATCTACAACCGGGCTTTGCAAATCCGGCCCCTCAAACGTCCGCGGA
CGCGATCGGGCGTGTCCGCAGACAGTGACCGGTCACGCCTTAAATTAGCCACTTTGCA
>chr4B_125
--------------------------------------------------------------------------------
--------------------------------------------TTTAATCTTGTTCGGGTTGTGATTTTCTCTGGCGCA
TTAGTTTATTCCCTCAGAGAATGCAACTTTCTCGTAAAGAGGCTTTCCGATGCTGGCACCTAGAAAGGCATATCCAGTAT
TGAGTTCAGCACTTTTATACTTTTTCGGC-TTTTGCTTTACTTACGTACGGTTTATACTGTTGTTTTTAGTGTCTCTTGC
CTACAATATAGCATCACAATGTTATGGTTTGTA-----------------------------------------------
--------------------------------------------------------------------------------
-------TATATGTCTTTGGGAGTTGAGTTGCTAGTATGCCACAATTAGTGTACTGGTTTTAATTGATTCCTTCGTTTAC
GCAAAAAATAGCTCTTCATATATACAGATCTACTTTGCATGCTGTGTATAACCTATATTTGCGCCGCCTTACCGTGCTTT
CTCACTAGGCTCCAAGCGCAGAGTTATGCCATTGTGTTTGTGTAGTA--TAGTCTGAGTTCTGACATGGCTTTGGGGAGC
AATGGAAAGCTTGTAGATAGATGACGAGTAGATTTCCTAATTCAGTAAGCTGATCATATCGATGTCACAGTGATGACAAC
TTTACTGGCTTGCTAGTCACATTTAGAATTTTTTTAATGCAGAAAAATCAAAGACTTTGAGTGCCACTACGTGTTAATTT
TATCTCTCCATCTTTTGTGCATTCTTTAATTCTTTGTCAAAGGTATAATTATCAGAATTTTTCATATGTTCCATGTATAT
CTGTAGGCACAAATCACTTGACTTGAGACGAATATCAGAACTTCTCCTCTTAGTTGATTCTTCATATAGTCACTTCTCAA
GATGGAACAGATTTCAGTGAGTTGCTTCCTTCTGTTCATTAAAATCCTCTTGAAACTGAATGGTTTCATAGTTATATCTT
GTGAACAACC----AAATTCTGAAGCACTGATTTTTTT-TTTCCTTTTCATCTTGGAAATTGTCTATAGCTTGGGCATCG
ATATAAGGAGTGCAGGCCACAAAGGATTAGCAGCTCTCCAAGCAAACTACTTGTTGGGAAGGATGTACTGAAAGAATTGG
AGGAAAGACGGTCATCCCCCAGTGTCGTCGCAAAACTGATGGGAATTGACGTATTGCCACCTACTTACGTAGCCAATAAA
AGACATCAACAATTCAAGGATGTCTTTGAAGTGTCGGAGGAGCTACCGGAGACTTTCACAAAAGAGATGTCATACCATTT
CCCTAAAGGGCTGCCAAGCTTGAAGAGGAGTGCAATGAAATTAAAAAAGCTTATGCCATCAAAGTCTCCCTACTGTGATG
AAACATTTGATAATGAAGTAGAGTACAACAATGGCTTGGATCGCTTGAATCCACTTGAAATAGACAATCCTTTGTTTGAG
AAGTGCCCCCGCGATCTGAATTATTCCCCAAATAATCAGCATGAGAAAGATACCGCAGGCACTTTCAGGAAGTATCCTGT
GGGTTTAGCTAATTCCTCACTTAAAGATATAAAAAATATGTCGAGAGGGAATTACGGAGATTTCAACAACATTGTCGTTC
TGGAGCCTGGCTTGGGGAACAGTCATGATCCAGAGAACTCTTTTTCCATGTCGTTGCTCTCTCATGACAATTGCAATTCC
AGGAGAAATAGGAAGAAGAAGTTGGGTGAGTCTGTTGTAATGAGCAATGAGAGAGTTTCACAACATCTTTTAGATACTGT
TAATGTGGCTAGAATAAAAAGAGAAAGATACTTGACTAGTGATGCCATCAATTCTCTGTCAAAGGGAGAGGAGCCATCAT
TTGATCAATTCAACATCGTAGATATGAATAGCGCTGGATCATTTCAGATGTATTCTGGCGATGACATTGACTCCAGGCAA
---AACAAGTCATCATCAAGTAGCTTACCTGGGAAATCCTTTCGGAAGTATGATGAAGGTGATGTCGGATCGAGAACTCT
TGCACAGATGTTTGCTTTATCTGATTCAGAGAGGGTAAAGAAAAATTTGAACCCGCATGCTCAGATTCAACACAATAAAC
TTGACCAGGGCAAAGGCCACAACAAGGAAGGATGCTTTATAGTTTTACCAAAGCATGGATCTCCACTGTCTCTTCACACC
TCATTGGACAGGAGTTCTTCCTGCGAAGGGTCTCCTAACAGTGAAATTTTCCCAGATCCTTCAGTTAGCTACAACAATGG
CAAGGTTACCTTTGATTCTTTTCTGGCCAAACGAAGGCTCAAGCAAATTGCCAGCGGGAGGCAAAATAACTTAAGGAATG
CTTCTGTGGTAAAAAGTCTTGCCTTGGAGCAGCGGAGACCTGCTTCTCCTTCTCTTGATGATTTCAGGTGTCATTCATGG
CGTCCATCTGATAATGTTTCAACTTCTGTCTGCACAAATGAGAGAGTATTGTTCGCGACAGATAAGGGCTTAATCCACGA
GCCTGCTGAAACTGTGCCTTCTTCGTTTCAATTGCAATTATCTAGGGAACAGAAGGTCAGAACTTTGTGCGCCATGAATT
TAGCAAAGTAAAACAAAACATAATATTCTTGCATGTTGCAAACTGTTCTGTTGTTTCAACGAATCAAGAATGAAATAGCG
AAAAAGTTCTACT---TTAACAATTTAACATAGAAACATGAACAATCCAATTCCTCTGCAACAATAAGTGTTCAACTGCT
GCTTTGAATCATACTCCTGTTTCATAATTTTCTTATTATCACGAGGATGTGTTTCTGCCGTCATTAAAAAAT-ATCAAGT
GC-----GACAAGACAAAAGAACTCTGTGAACTCAATTCACTCACTCAGAATCATTGTAATGAGACTGTTTCAGTTATTG
ATCCTGAATTGTGTACAATTCATGATGTTTTTTCTTTAACATTAATATGTTTTCTAAGTTCTATTTTTTCATGATATAAG
ATGTGCACTGTTCCACTATAGTAGAATACTTGTTGTTATGTCATATTTAAACCTCATCATTTTTCCCACTAAGTATGTAG
ACTCTAATGCAACTTTCATCTGTTGACAAGTTTAGATTGTTAAATCTTTTCATGCTGATACCATGAAGCCTAAGTTTATG
GTGCACAGCTCTTCAAGTCGTTTCCCTATCTTTTTTAGGTTTCAGCAACGCCTTTGCAGTGTCATGACTATGAATCCGTA
TCTATTTCTAATCATGATGATCTGGCAAAGTCTCGTAAAGGATTGGAAGAGTTTGAGCAGCCGAGCCCAGTGTCCATTCT
ACAGCCCCCAACTGATGAAGACAGTTGCTGTTCTGGATTCTTCAAGAATGACTTGCAAGACATGCTCAGTAAGACAACAA
TATAGCTAGAAGGCTGTACTGCATAGACTAGTGCTTGTGTCTTTTTGTAGTACATTGCTAGCTCTCCTAAACTGCGAAGT
TAATACAAAAAATCATTAAATTAAGCTAAATACTTACGAGTTACGACATAGCATCTGATAAACATTATTGCTAACTCCCA
CATTGCAACATGCTGTTCAAGCAAAGAATTTAGGTGTATAGTTAAGTTGAGTTTTAAATCACTTCTTTT-----------
---------------GCAGCTATTAATGAGAATTGCACAGAAGATATGTTTACAGGATTTTTGCATCATGCATTCATTAA
CTGCAACTTCTTTATTGACCTCAGGCATGGAGACACGAATAGACCATCGTCGATTCCGAGATGAGCCTGAAGTCTCCACC
ATCTCAAGTGATGATGGCAATGATTCTTCTTACAAATCTTTGGAAGCATTTCAGGTTGAGGAGGACAGGGACTTCTCATA
TCTCCTTGATATTCTCATAAGCTCTGGTATGATAGTTTCAACTGACTGGCAGCTCTTGTGCAAGTCATGGCACTCATCTA
GTTTCCCTGTTGCTCCCCAAGTCTTTGAGAGGCTTGAGAGCAAGTACGCCAAAATGACCTCATGGCCAAAGCCAGAGAGG
AGACTTATGTTTGATCTTGCAAATTCTGTTCTCTCCGATGTCCTTGCACCTTGCACCAATATACACCCATGGGTGAGTTC
TACTAGACAGTGCAGGCCTATCTGGGGCCCTGAAGGGCCTGTTGAGAAGGTTTGGCAAATGATGGTTAGGCAGCAGGAGG
AGCTGGCGATAGCGCATCCTGATGACAAGGTTCTGGATCCAAACTGGCTTGAACTTGGTGATGACATATATACGGTCGGC
AAGCACATATCCATGATGTTGCATGATGACCTCTTGGAGGAAGTCATATTGGAATTCGTCTCACTCTCAGGGTCGGCCGC
TGCATGTATGTAGATCAAATCGAGAAAATTCAGTCTG-----------TCGCAACAAAGTACAGTGACAAGTCTGAGTTA
GTTTTTTCATGGACAATCTTCAAGCTTATATGCTGTA-----------------------------------ACAGATGT
AAGGCTTGTTGATCCAGACGCAGCAATTTTTTTCTAGTCTATGATATAATTATG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------T----CACTAGATACTGGACAATTTTCTTCTTTGAAACAGTAACCAAGATGTGCTGGGGTGGGATTGATT
ATAGAAAATTGATCATTCCGCCTTGAAATTTGTTTT--TTTACCAGTGAAAACAGCAGGAGAGGCTCCCACTGTTATATA
GTACTCCCTCCGTCCCATAATATAAGAGCGTTTTTGACACTACACCAGTGTCAAAAACGCTCTTATATTATGGGACGGA-
------------------GGGAGTATTAAATTAGCAGAGTATTTACATGTCC----------------------------
------TCAAAGAGGTAGAGGAGACTAACAGGAAACTATACAAGATAGTTAATCCTAGAAAGAAGAGATGAAATTGCCAA
TAAATTCAGCAAGCTCTGGTTTTACTCTA---------------------------------------------------
----------------------------------------------------------
>chr4A_371
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------ACCTGGATGTATTTTTTTACTTCTAGTGT
TTTTTGTACTACCTTGACAGATGATGAATAGATCGGAAGTTTTCTCCGCAAAAATAGATAAATATAGCATCATAATGTTA
CAGTTTGTATATGTCTTTTGGAGATGAGTTGTTAGCATGTCACAGTTCGTGTACTGGTTTTAATGGATTCCTT----TAC
GCAAAAAATAGCTCCTCATATGTACATATCTACTTTGCATGCAGTACATAGCCTATGTTTCCGCCGCCTTACTGTGCTTT
CTCACCATGCTCCAAGCGCAGAGTTATGCCGTTGTGTTTCTGTAGTAGCTAGTCCGAGTTCTGACATGGCATTGGGGAGC
AATGGAAAGCTCGGAGATAGATGAGGAGTAGATTTCCTAATTAAGTAAGCTGATAATATCGATTTCACAGTGACGGCAAG
TTTACTGGCTTGCTAGTCACATTTAGAATTTGTTTGATGCAGAAAAATCAAAGACTTCGAGTGCCACTATGTGTTAATTT
TATCTCTCCATCTTATGTGCATCCTTTAAATCTT--------------------------------TGTTCCATGTATAT
CTGCAGGCACAAAGCACTTGACTTGAGACGAATATCAGAACCTCTCCTCTTAGTTGATTCTCCATATAGTCACTCTTCAA
GATGGAACAGATTTCGGTGAGTTACTTCCTTCTGTTCATTAAAATCCTCTTGAAGCTGAATGGTTTCATAGTTATAACTT
GTGATCAACAACCAAAATTCTGAAGCACTGAGTTTTTTCTTTTCTTTTTATCTTGGAAATTGTCTATAGCTTGGCCATCG
ATATAAGGAGTGCAGGCCACAAAGGACTAGCAGCTGTCCAGCCAAACTACTTGTTGGGAAGGATGTACTGAAAGAATTGG
AGGAAAGACGGTCATCCCCCAGTGTGGTCGCAAAACTGATGGGAATTGACGTATTGCCACCTACTTACATAGCCCATAAA
AGACATCAACAATTCAAGGATGTCTTTGAAGTGTCGGAGGAGCTACCGGAGACTTTCACAAAAGAGATGTCGTATCATTG
CCCTAAAGGTCTGCCAAGCTTGAAGAGGAGCGCAATGAAATTAAAAAAGCTTATGCCGTCAAAGTCTCCCTATTGTAATG
GAACATTTGATAATGACGTGGAGTACAGCAATGGCTTGGATCGCTTGAACCCACTTGAAATAGACAATCCTTTGTTTGAG
AAGTGCCCCCGCGATGTGAATTATTCCCCAAATAATCAGCATGAGAAAGATATCACAGGCACTTTCAGGAAGTACCCAGT
GGGTTTAGCTAATTCCTCACTTAAAGATATAAAAGATCTGCCGAGAGGGAATTACGGAGATTTCAACAACATTGTCGTTC
TGGAGCCTGGCTTGGGAAACAGGCATGATCCGGAGAACTCTTTTTCCATGTCGTTGCTCTCTCATGACAATTGCAATTCC
AGGAGAAATAGGAAGAA---GTTGGCTGAGTCTGTTGTAGTGAGCAATGAGAAAGTTTCACAACATCTTTTAAATACTGT
TAATGTGGCTAGAAAAAAAGGAGAAAGATACTTGACTAGTGATGCCATCAATTCTCTGTCAAAGGGAGAAGAGCCATCAT
TTGATCAATTCAACATCATAGATATGAATAGCACCGGATCATTTCAGATGTATTCTGGCGGTGACATTAACTCCAGGCAA
AACAACAAGTCATCATCAAGTAGCTTACCTGGGAAATCCTTTCGGAAGTATGATGAAGGCGATGTCGGATCGAGAACTCT
TGCACAGATGTTTGCTTTATCTGATTCAGAGAGGGTAAAGAAAAATTTGAACCCGCATGCTCAGATTCAACACAACAAAG
TTGACCAGGGCAAAGGCCACAACAAGGAAGGATGCTTTATAGTTTTACCAAAGCATGGATCTCCACTGTCTCTTCACACC
TCATTGGACAGGAGTTCTTCCTGTGAAGGGTCTCCTAACAGTGAAATTTTCCCAGATCCTTCAGTTAGTTACAACAACGG
CAAGGTTACCTTTGATTCTTTTCTGGCCAAACGAAGGCTCAAGCAAATTGCCAGCGGGAGGCAAAATAACTCAAGGAATG
CTTCTGTGGTAAAAAGTCTTGCCTTGGAACAGCGGAGACCTGCTTCTCCTTCTCTTGATGATTTCAGGTGTCATTCATGG
CATCCATCTGATAATGTTTCAACTTCTGACTGCATAAATGAGAGAGTATTGTTCGCGACAGACGAGGGGTTAATCCACGA
GCCTGCTGAAACTGTGCCTTCTGCGTTTCAATTGCAATTATCTAGGAAACAGAAGGTCTGAACTTTGTGCGCCATGAATT
TAGCAAAGTAAAACAAAACATAATATTCTTGCATGTTGCATACT-TTCTGTTGTTTCAACGAATCAAGAATGAAATAGCG
AAAAAGTTCTCTACTATTAACAATTTAACATAGAAGCATGAACAATCCAATTCCTCTGCAATAATAAGTGTTCAACTGCT
GCTTTGAATCATACTCCTGTTTCATAATTTTCTTATTATCATGAGGATGTGTTTCTTCCGTCATTAAAAAAA-ATCAAGT
GTTTTCTGACAAGATAAAAGAACTCTGTGAACTCAATTCACTCATTCAGAATCACTGTAATGAGACTGTTTCAGTTATTG
ATCCTGAATTATAGACAATTCATGATATTTTTTCTTTAACATTAATATGTTTTCTAAGTTCTATTTTTTCATGATATCAG
ATGTGCATTGTTCCACTATAGTAGAGTACTTGTTGTTATGTCATATTTAAACTTCATCATTTTCCCCACTAACTATGTAG
ACTCTAATGCAACTTTCATCTGTTGACAAGTTTAGATTGTTAAATCTTTTCATGCTGATACCATGAAGCCTAAGTTTATG
GTGCACAGCTCTTCAAGTCGTTTCCCTATCTTTTTTAGGTTTCAGCAACGCCTTTGCAGTTTTATGACTGTGAATCCATA
TCTATTTCTAATCATGATGATCTGGCAAAGTCTCGTAAAGGATTGGAAGAGTTTGAGCAGCCGAGCCCAGTGTCCATTCT
ACAGCCCCCAACTGATGAAGACAGTTGCTGTTCTGGATTCTTCAAGAATGACTTGCAAGAAATGCCCAGTAAGATAACAA
TATAGCTAGAAGG-----CTGCATAGACTAGTGCTTGTGTCTTTTTGTTGTACATTGCCAGCTCTCCTAAACTGCGAAGT
TAATACAAACAATCATTAAATTAAGCTAAATAC-------TTACGACATAGCATCTGATAAACATTATTGCTAACTCACA
CATTGCAACATGCTGTTCAAACAAAGAATTTAGGTGTATAGTTAAGTTGAGTTTTAAATCACTTCTTTTAGTATGCCAAA
AATGT---GAGGAGTGCAGCTATTTACGAGAATTGCACAAAAGATTTGTTTACAGAATTTTTGCATCATGCATTCATTAA
CTGGAACTTCTTTATTAACCTCAGGTGTGGAGACACAAATGGACCATCGTCGATTCCGAGATGAACCTGAAGTCTCCTCC
ATGTCATGTGATGATGGCAATGATTCTTCTTACAAATCTTTGGAAGCATTTCAGGTTGAGGAGGACAGGGACTTCTCATA
TCTCCTTGATATTCTTATAAGCTCTGGTATGATAGTTTCAACTGACTGGCAGCTCTTGTGCAAGTCATGGCACTCATCTA
GTTTCCCTGTTGGTCCCCAAGTCTTTGAGAGGCTTGAGAGCAAGTACGCCACAATTACTTCATGGCCAAAGCCAGAGAGG
AGACTTATGTTTGATCTTGCAAATTCTGTTCTCTCCGATGTCCTTGCACCTTGCACCAATATACACCCATGGGTGAGTTC
TACCAGACAGTGCAGGCCTATCTGGGGCCCTGAAGGGCCTGTTGAGAAGGTCTGGCAAATGATTGTCAGGCAGCAGGAGG
AGCTGGCGATAGGCCATCCTGATGACAAGGTTCTGGATCCAAACTGGATGGAACTTGGTGATGACATATATATGGTGGGC
AACCAGATAGCCATCATGTTACATGCTGACCTCTTGGAAGAAGTCATATTGGAATTCCTGTCACTCTCAGGGTCGGTCGC
TGCATGTATGTAGGCCAAACTGACAAAATTCAGTCTA-----------TCGCAACAAAGTACAGTGACAAGTCTGAGTTA
GTTTTTCCATGAACATTCTTCAAGCGTATATGCTGT---AAGCGTTACCATTTGTTGCCTTTCAAGTGCACAGATGTAGT
AAGGCTTGTTGATACAGACGCAACAA--TTTTTCTAGTCTATGATATAATTATG--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TATGTCACTAGATATTGGACAATTTTCTTCTTTGAAACAGTAACCAAGATGTGCTGTGCTGGGATTGATA
GTAGAAATTTGATCACTCCGCCTCGAGATATGTTTT--TTTACCG-----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S---------------------------
----------S-------------S---------S------------S-S------------------------------
------------------S-S----S---S-----------------------S------------------S-S-----
----------------------SS-S--SSSSSSSSSSSSSSSSSSSSSSS-----------------------------
--------------------------------------------------------S---------------S----S--
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------S-----
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S----------------------------------------------------S-----------------
------------------------------S--------SS--S--S--S------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
----------------------------------------------------------------------S---------
---------------------------------------------------------------S----------------
----------------------------------------------------------S---------------------
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------S-----
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
-----S--------------------------------------------------------------------------
------------------S-----------------------------------------------------S-------
--------------------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------SS-------------------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------S---------------------------------S--------------
----------------------------S---------------------------------------------------
------------S-------------------------------------------------------------------
-----SSS------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S--SS--S-------------S--------
------------S-------------------------------------------------------------------
------------------------S---S--------SSSSSSSSSSS------S-------------------------
------------------------------------SSS--------SSS-----------SS---SSSSSS--------
-------------------------S---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSS----S---------------------------------------S--S---------------------S
---------------------S--------------SS-----------------S------S---------S--S----
------S--------SSS-S--SSS-SSSSSSSSSSSS-SSSSS-S-SSSSS-SSSSSSS-SS--S--SSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS----S-----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS-----------S-----S----------------S---S-------S----S----------------------
S----------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_358
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------ATGTGCTTGTAGTCGTCGCT------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2059
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----------------------------------------------------------AGGTGACATTAACTCCAGGCA-
--------------------------------------------------------------------------------
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----------------------------------------------------------
>forward_361
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------TGCTTGTAGTCGTCGCTAGG---------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------
>reverse_2235
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------GTAAAC
TTGACCAGGGCAAAGG----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------
>forward_362
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------GCTTGTAGTCGTCGCTAGGT--------------------------------------
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>reverse_2265
--------------------------------------------------------------------------------
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------------------------GGGAAGGATGCTTTATAGTTTTACCA------------------------------
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>forward_2090
--------------------------------------------------------------------------------
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---------------------------------------------------------------------ACTCCAGGCAA
AACAACAAGC----------------------------------------------------------------------
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>reverse_3768
--------------------------------------------------------------------------------
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-------TGAGGAGTGCAGCTATTTACGA---------------------------------------------------
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>forward_2235
--------------------------------------------------------------------------------
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-----------------------------------------------------CGCATGCTCAGATTCAACACAG-----
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>reverse_4155
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--------------------------------------------------------------------------AAGAGG
AGACTTATGTTTGATCTTGC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------
>forward_3552
--------------------------------------------------------------------------------
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----------AGGCTGTACTGCATAGACTAGG------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------
>reverse_5399
--------------------------------------------------------------------------------
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--------------------------------------ACAACCGGGCTTTGCAAATC----------------------
----------------------------------------------------------
