>input_sequence_20054
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-------------------------------------------------------ATGGCGACGCCTCCGGCAGCCTCCA
TTTCCAGCCACCTCCGAGCTCCGCCGCCATGGCCGCCTCCCAAGAGCACCAGCCAGAGAGCGAGGGTTCGGTGTGGCGTC
CTCGCGCCGTCCGGCCAAGCCTTGGAGGCAGCCGCTCCTCCGAGGGACGCCGAGAAATCGCCAAACTGGCCCCCGAGCTC
CGACGTGAACCTGCAGATTCAGCGGCTGTGTCGGTCGGGCGACTTGGCGGAGGCTTTGAGGTTGCTCGGCTCGGATGGGG
TCGATGACCGGAGCTACGGCGCCGTGCTCCAGCTCTGCTCGGAGATGAGGTCGTTGGAGGGTGGGAAGAGAGCCCATTTC
CTGGTTCGGGCATCTGGCCTTGGAGTAGATGGAATGGACAGTGTTCTTGGGCAGAAATTGGTGCTGATGTATTTGAAGTG
TGGGGACTTGGGGAGTGCAAGAAGGGTGTTTGATGAAATGCCTCAAGTAAGTGATGTGCGTGTTTGGACTGCTCTGATGA
GCGGTTATGCCAAGGCTGGTGATTTACGAGAAGGTGTGTTGCTGTTTAGGAAGATGCACTGCTGTGGGGTTCGGCCGGAC
GCATACACCATTTCCTGCGTCTTGAAGTGCATTGCTGGTTTAGGCAGTATCGCGGATGGTGAGGTAGTTCATGGGTACCT
TGAGAAGTTGGGTTTTGGCTCGCAGTGTGCAGTTGGAAATGCATTGATGGCTCTTTACTCAAGGTGTGGCTGTAACGAGG
ATGCTTTGCGGGTCTTTGAAGGAATGCCTCAGCGGGATGCTATTTCTTGGAATTCTGTGATCAGTGGATGCTTTTCAAAT
GGATGGCATGGCAGGGCTGTTGAGCATTTAAGCGAAATGTGGTTTGAAGGCCTGGAGATCGATTCTGTGACGATGCTCAG
TGTTTTGCCTGCCTGTGCTGAATTAGGCTACGAGCTTGTTGGAAGAGTGATTCATGGGTACTCTGTGAAAACTGGATTAC
TGTGGGAGCTTGAGTCTTTGGAGAGAGGAGTAGATGAAAATCTGGGATCCAAATTGGTATTCATGTATGTGAAATGTGGT
GAATTGGGCTATGCACGAAAGGTATTTGATGCAATGTCATCGAAAAGCAGCATACATGTGTGGAATCTACTGATGGGTGG
GTATGCAAAGGTTGGTGAATTTCAAGAAAGCCTATTTCTTTTTGAGAAAATGCATGACAGTGGAATTGCCCCCGATGAGC
ACACCGTTTCATGCCTTGTAAAGTGCGTCACTAGTTTGTATAGTGCTAGGGATGGCCTAGTGGTTCATGGGTATCTTTTG
AAGTTGGGTTTTGGTGCACAGTGTGCAGTTTGCAATGCAATGATATCATTCTATGCGAAATCCAATATGACTGAAGATGC
ACTCTTGGTATTTGATGGAATGCCTCATCGAGATGTCATTTCTTGGAATTCTATCATCAGTGGCTGCACTTTCAATGGAT
TACACAGCAAAGCTATTGAGCTATTTGTAAGAATGTGGTTACAAGGACAGGAGTTGGATTCAGCCACATTGTTAAGTGTT
CTGCCTGCTTGTGCACAGTTGCGCCATTGGTTTCTAGGGATAGTAGTTCATGGGTATTCTGTGAAAACTGGATTGATCGG
CGAGACATCTCTCGCTAACGTTCTTCTTGATATGTACTCAAATTGCTCAGATTGGCGTAGCACCAATAAGATATTCAGAA
ATATGGATCAGAAAAATGTTGTCTCATGGACAGCAATAATTACGAGTTATACCAGGGCTGGTCTTTTTGACAAAGTGGCT
GGGTTACTCCAAGAAATGGCATTAGAAGGTATCAGACCAGATACCTTTGCAATTACCAGTGCTCTTCATGCTTTTGCTGG
TAATGAATCGCTGAAAGAGGGCAAATCTGTACATGCATATGCCATCAGAAATGGAATGGAGAAGGTTCTTCCTGTTGTCA
ATGCGCTAATGGAAATGTATGCGAAATGTGGAAACATGGAGGAAGCAAGGTTGATTTTTGATGGCGTGATGAGTAAGGAT
GTGATATCATGGAATACACTGATAGGAGGCTACTCCAGGAATAATCTTGCCAATGAAGCGTTCAGTTTGTTCACTGAAAT
GCTGCTCCAATTCAGACCTAATGCCGTGACCATGAGCTGCATCCTTCCTGCCGCGGCAAGCCTTTCATCCCTGGAGCGAG
GCAGAGAGATGCACACCTATGCCTTACGAAGAGGGTACTTGGAAGACGATTTTGTAGCCAACGCCCTCATGGACATGTAT
GTTAAGTGTGGTGCATTGCTGCTAGCTCGACGGTTGTTTGACAGGTTGAGCAGCAAGAACCTCATCTCATGGACCATCAT
GGTAGCGGGATATGGCATGCATGGCCGTGGCAGGGATGCCATTGCTCTCTTTGAGCAGATGAGGACCAGTGGCATTATGC
CAGATGCAGCCTCGTTCAGTGCCATACTGTATGCTTGCAGCCATTCAGGTCTGAGAGACGAGGGATGGAGATTCTTCGAT
GCGATGCGTCATGAACACAGAATAGAGCCCAGGCTGAAGCACTACACCTGCATGGTTGACCTACTAACCAACACCGGCAA
TTTGAGGGAAGCTTACGAGTTCATCGAGTCGATGCCGATCGAGCCAGATTCAAGCATATGGGTCTCATTGCTGAATGGAT
GCAGAATTCACAGGGATATCAAGCTTGCAGAGGAGGTAGCAGAGAGGGTCTTTGAACTGGAACCTGAAAACACCGGATAC
TACGTTCTTCTTGCCAACATATATGCTGAAGCTGAGAGATGGGAGGCTGTAAGGAAGCTCAGGAACAAGATCGGCGGCCG
AGGACTCCGGGAGAAAAGTGGCTGCAGCTGGATTGAGGCCAGGGGCAGGGTTCAGGTCTTCATCGCGGGCAACCGGAATC
ATCCGCAGGGGGAGAGGATCGCAGAGTTCCTGGATGAAGTTGCCAGAAGAATGCAGGAAGAAGGCCATGACCCAAAGAAG
AGATATGCTCTGATGGGCGCTGACGACGCAGTGAACGGCGAATCACTCTGCGGTCACAGCTCGAAGCTCGCCGTCGCGTT
TGGGGTGCTGAATCTGTCGGAAGGGCGCCCGATCCGCGTGACGAAGAACTCAAGGGTTTGCACCCACTGCCACGAGGCCG
CCAAGTTCATATCCAAGATGTGCAGCAGAGAGATCATATTGAGGGATTCCAACAGGTTCCATCATTTTGAACAAGGCAGG
TGCTCTTGCAGAGGTTACTGGTAACAACACCGCTGCTATGTGACAGTAATTAGTGAATCGGCTTGCCAGCTGCAGTATGT
TCATAGCTGTTGCTAGAAATATATTAGCATGTAATATCACTGTA------------TCACAATCACAACGTTTGGGGAAA
TGACTTTGGCCCGGATCTTTTTGCGCAGGATTTTCCAGAATCAAGATTCTGGAGAGCTGCTCACAGAATCTGCATTAG--
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>chr3D_1_TraesCS3D01G137800
CTCCCGGGCGGCTTGGGAGAGTCCCTGGCAATGGCGGCCTGGATGGCCCCGAAGAACTCCATGAGCTCTTCTTTGCTGTG
CTTCTTGACCGCCATTCTTGAAGTGGAGGACCCGTTGGCTTCTGCTCTGACCGTCAGGGAAGATGAGCACGGCAGAGAAC
CCCGCCGTGGAGCGCGATGGAGAGCAACATCTGCAGGTGCTACCAAATTCAGCGCTACAGACTTCACCAAAAGACCGCGT
AGT---TACTAGTTAACTGAGGTTTTCTCATCAGTGGTTACTGTTTTTATTTTCGAAAAATTAATCTGGCAAAGAGCAGA
AGAAGTGATTTCCAGTGAACTGCCACTCGGTCAGATTGAAAGCGATACTGAAACCAAGAGAGGAAGCTGTAACAGCAGAG
ACTACAATGGTGCCTGTTTTGTACTCCTATCCATTTATGCGACAAGTAATTCGGCACGGAGGGAGTAGTATAGTATGTAT
CATATAAAATCGTACAAAAAGTATA-ACCAGCGAGGCAGTGAGCACAAGGAGCTTA------------------------
-------------AACACACTGACCTTGATGAAAATGTTTTGTATCGAAAAGGAGATAACTACAATGTTTCATAATCACC
TCTTTGGAGAGCAAATGATCCGGCGAAGGCCGCTTTTCGCAGAGGAGTGCGAGAGATTTGGTGATGCTGCATGAGAACTC
CTCCCATTTCTCCTCTCTTCTTCCTCTG------------------------------------------TGACAGTTGT
GCTCTTACTCTGTGAGTGCTCTATCCTCTTTCTCAGCCACACGGAGATGGTAAATGATACCGACAGTCCATGAAATTTTA
CGTAAACACCCTCGTTAGAAAATGGTCTTTTTTTTAGCATCGATGGAGCAGAAAGGACTGTAGCTAACATGTGTCATTTT
GTCAGTTTTACGGAATGTGAGGGGGCAAATGGCCAAAGAAGCAGCCTAATCCAGAAAGCTATCCACTGCAAGACCAAACC
ACGCCGACAGCGCGAATTTCGCGGCAAAATTTGAACTCCT------------CCCATGGCGACGCCTCCGGCAGCCTCCA
TTTCCAGCCACCTCCGAGCTCCGCCGCCATGGCCGCCTCCCAAGAGCACCAGCCAGAGAGCGAGGGTTCGGTGTGGCGTC
CTCGCGCCGTCCGGCCAAGCCTTGGAGGCAGCCGCTCCTCCGAGGGACGCCGAGAAATCGCCAAACTGGCCCCCGAGCTC
CGACGTGAACCTGCAGATTCAGCGGCTGTGTCGGTCGGGCGACTTGGCGGAGGCTTTGAGGTTGCTCGGCTCGGATGGGG
TCGATGACCGGAGCTACGGCGCCGTGCTCCAGCTCTGCTCGGAGATGAGGTCGTTGGAGGGTGGGAAGAGAGCCCATTTC
CTGGTTCGGGCATCTGGCCTTGGAGTAGATGGAATGGACAGTGTTCTTGGGCAGAAATTGGTGCTGATGTATTTGAAGTG
TGGGGACTTGGGGAGTGCAAGAAGGGTGTTTGATGAAATGCCTCAAGTAAGTGATGTGCGTGTTTGGACTGCTCTGATGA
GCGGTTATGCCAAGGCTGGTGATTTACGAGAAGGTGTGTTGCTGTTTAGGAAGATGCACTGCTGTGGGGTTCGGCCGGAC
GCATACACCATTTCCTGCGTCTTGAAGTGCATTGCTGGTTTAGGCAGTATCGCGGATGGTGAGGTAGTTCATGGGTACCT
TGAGAAGTTGGGTTTTGGCTCGCAGTGTGCAGTTGGAAATGCATTGATGGCTCTTTACTCAAGGTGTGGCTGTAACGAGG
ATGCTTTGCGGGTCTTTGAAGGAATGCCTCAGCGGGATGCTATTTCTTGGAATTCTGTGATCAGTGGATGCTTTTCAAAT
GGATGGCATGGCAGGGCTGTTGAGCATTTAAGCGAAATGTGGTTTGAAGGCCTGGAGATCGATTCTGTGACGATGCTCAG
TGTTTTGCCTGCCTGTGCTGAATTAGGCTACGAGCTTGTTGGAAGAGTGATTCATGGGTACTCTGTGAAAACTGGATTAC
TGTGGGAGCTTGAGTCTTTGGAGAGAGGAGTAGATGAAAATCTGGGATCCAAATTGGTATTCATGTATGTGAAATGTGGT
GAATTGGGCTATGCACGAAAGGTATTTGATGCAATGTCATCGAAAAGCAGCATACATGTGTGGAATCTACTGATGGGTGG
GTATGCAAAGGTTGGTGAATTTCAAGAAAGCCTATTTCTTTTTGAGAAAATGCATGACAGTGGAATTGCCCCCGATGAGC
ACACCGTTTCATGCCTTGTAAAGTGCGTCACTAGTTTGTATAGTGCTAGGGATGGCCTAGTGGTTCATGGGTATCTTTTG
AAGTTGGGTTTTGGTGCACAGTGTGCAGTTTGCAATGCAATGATATCATTCTATGCGAAATCCAATATGACTGAAGATGC
ACTCTTGGTATTTGATGGAATGCCTCATCGAGATGTCATTTCTTGGAATTCTATCATCAGTGGCTGCACTTTCAATGGAT
TACACAGCAAAGCTATTGAGCTATTTGTAAGAATGTGGTTACAAGGACAGGAGTTGGATTCAGCCACATTGTTAAGTGTT
CTGCCTGCTTGTGCACAGTTGCGCCATTGGTTTCTAGGGATAGTAGTTCATGGGTATTCTGTGAAAACTGGATTGATCGG
CGAGACATCTCTCGCTAACGTTCTTCTTGATATGTACTCAAATTGCTCAGATTGGCGTAGCACCAATAAGATATTCAGAA
ATATGGATCAGAAAAATGTTGTCTCATGGACAGCAATAATTACGAGTTATACCAGGGCTGGTCTTTTTGACAAAGTGGCT
GGGTTACTCCAAGAAATGGCATTAGAAGGTATCAGACCAGATACCTTTGCAATTACCAGTGCTCTTCATGCTTTTGCTGG
TAATGAATCGCTGAAAGAGGGCAAATCTGTACATGCATATGCCATCAGAAATGGAATGGAGAAGGTTCTTCCTGTTGTCA
ATGCGCTAATGGAAATGTATGCGAAATGTGGAAACATGGAGGAAGCAAGGTTGATTTTTGATGGCGTGATGAGTAAGGAT
GTGATATCATGGAATACACTGATAGGAGGCTACTCCAGGAATAATCTTGCCAATGAAGCGTTCAGTTTGTTCACTGAAAT
GCTGCTCCAATTCAGACCTAATGCCGTGACCATGAGCTGCATCCTTCCTGCCGCGGCAAGCCTTTCATCCCTGGAGCGAG
GCAGAGAGATGCACACCTATGCCTTACGAAGAGGGTACTTGGAAGACGATTTTGTAGCCAACGCCCTCATGGACATGTAT
GTTAAGTGTGGTGCATTGCTGCTAGCTCGACGGTTGTTTGACAGGTTGAGCAGCAAGAACCTCATCTCATGGACCATCAT
GGTAGCGGGATATGGCATGCATGGCCGTGGCAGGGATGCCATTGCTCTCTTTGAGCAGATGAGGACCAGTGGCATTATGC
CAGATGCAGCCTCGTTCAGTGCCATACTGTATGCTTGCAGCCATTCAGGTCTGAGAGACGAGGGATGGAGATTCTTCGAT
GCGATGCGTCATGAACACAGAATAGAGCCCAGGCTGAAGCACTACACCTGCATGGTTGACCTACTAACCAACACCGGCAA
TTTGAGGGAAGCTTACGAGTTCATCGAGTCGATGCCGATCGAGCCAGATTCAAGCATATGGGTCTCATTGCTGAATGGAT
GCAGAATTCACAGGGATATCAAGCTTGCAGAGGAGGTAGCAGAGAGGGTCTTTGAACTGGAACCTGAAAACACCGGATAC
TACGTTCTTCTTGCCAACATATATGCTGAAGCTGAGAGATGGGAGGCTGTAAGGAAGCTCAGGAACAAGATCGGCGGCCG
AGGACTCCGGGAGAAAAGTGGCTGCAGCTGGATTGAGGCCAGGGGCAGGGTTCAGGTCTTCATCGCGGGCAACCGGAATC
ATCCGCAGGGGGAGAGGATCGCAGAGTTCCTGGATGAAGTTGCCAGAAGAATGCAGGAAGAAGGCCATGACCCAAAGAAG
AGATATGCTCTGATGGGCGCTGACGACGCAGTGAACGGCGAATCACTCTGCGGTCACAGCTCGAAGCTCGCCGTCGCGTT
TGGGGTGCTGAATCTGTCGGAAGGGCGCCCGATCCGCGTGACGAAGAACTCAAGGGTTTGCACCCACTGCCACGAGGCCG
CCAAGTTCATATCCAAGATGTGCAGCAGAGAGATCATATTGAGGGATTCCAACAGGTTCCATCATTTTGAACAAGGCAGG
TGCTCTTGCAGAGGTTACTGGTAACAACACCGCTGCTATGTGACAGTAATTAGTGAATCGGCTTGCCAGCTGCAGTATGT
TCATAGCTGTTGCTAGAAATATATTAGCATGTAATATCACTGTA------------TCACAATCACAACGTTTGGGGAAA
TGACTTTGGCCCGGATCTTTTTGCGCAGGATTTTCCAGAATCAAGATTCTGGAGAGCTGCTCACAGAATCTGCATTAGGA
TCCTAGTGAAAAACTGAAAATCAATAGGTGTATTCTCCTGTCTGAAACGTTTTCTTTTGAGGGAGTTGTCCAGAATCTTG
AGAATCCAGGTTTTGGGAGGATTTTGAGTTGCACTAGGATTCTCCAGAATTCTGCCAAGATTTCCGAAGCAAAGTCGAGT
TCTTTTGTTTTGTTGATTTTTCAGACCCCAGATTCTCCAGAATCTGCTCAAAAGAACTGGGCCTTTGTAAGAAACAACAG
TTACAATTCTACGAAGTCATAAGGAAAACAAAAGATTTAAGCACATTTCACCATCTTTGATGAACTGCCAACACAAACCC
AATCATTCCATACTGAAACCATACATTTATAACGCCAACACAACAAAGATATACATGTCTATCCTAGCAGCACATCAGAG
TACAAGATTTCAGTACCACATAACTTTTGTCTCGTTACAAAAAATGGTTTCTGCAGAGCCTCTCAAGTCATGTAC-----
------------------------TGTCATTTCACCAGGTCTAGCTGCAGCTGGCTTGGGTTCATATGAAAAGACAGGAG
TCAGGGCAAACATGGCACTGATGACCAGGAAACATGTTGTGTCATACCC-AGAAAACTGTCCATAAGGCAACACCGCGCA
TTTCTCCATCTACAAGAAATTATATACTTTGACCACCTTGGATGTGTCGCACACAATCAGGTTATCTGAATCAGTTGGAG
CAGTACACAACCAATTTACCTGGCAAGATA--GATCAGATGTCAGTATTATGCCTAGAAATTTCAATGGCATAGTAACTA
ACAAAGTATTGA-----------------GTTAGTGCCA----TATCAAAAGACAATAATAAAAACAAAATTGAAGGTCT
AGTGATGACCTTTTTCTTCACATCAATATCCAACACCAGTTCACTATTGCTGCTTGTTTCAGGAGAAAATCCTTTGGACC
AATCCCATACTTTCAGTGATGCGTCGTTACCACCTGAAACAAGTAACTTTCCCTTCTCACCAAACGCTGAAAATGCCCTG
TTAAGTGGTTA
>chr3D_1
CTCCCGGGCGGCTTGGGAGAGTCCCTGGCAATGGCGGCCTGGATGGCCCCGAAGAACTACATGAGCTCTTCTTTGCTGTG
CTTCTTGACCGCCATTCTTGAAGTGGAGGACCCGTTGGCTTCTGCTCTGACCGCCAGGGAAGATGAGCACGGCAGAGAAT
CCCGCCGTGGAGCGCGATGGAGAGCAATATCTGCA-------CCAAATTCAGCGCTACAGACTTCACCAAAAGGCCGCGC
AGTTACTACTAGTTAACTGAGCTTTTTTCATCAGTGGTTACTATATTTATTTTTAGAAAATTAATCTGGCAAAGAGCAGA
AAAAGTGATTTCCAGTGAACTGCCACTCGGTCAGATTGAAAGAGATACTGAAACCAAGAGAGGAAGCTGTAACAGCAGAG
ACTACAATGG-----GTTTTGTACTCCTATCCATTTCGGCGACAAGTGAG--------------------TAGTATGTAT
CATATAAAATCGTACAAAAAGTATA-ACCAGCGAGGCAATGAACACAAGAAGTTTA------------------------
-------------AACACACTGACCTTGATGAAAATGTTTTCTGTCGAAAAGG---------------------------
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>chr3B_1
CTCCCGGGCGGCTTGGGAGAGTCCCTGGCAATGGCGGCCTGGATGGCCCCGAAGAACTCTATGAGCTCTTCTTTGCTGTG
CTTCTTGACCGCAATTCTTGAAGTGGAGGACCCGTTGGCTTCTGCTCTGACCGTCAGGGAAGATGAGCACGGCAGAGAAC
CCCGCCGTGGAACGCGATGGAGAGCAATATCTGCAGGTGCTACCAAATTCAGCGCGACAGACTTCACCAAAAGGCCGCGC
AGTTACTACTAGTTAACTGAGGTTTTCTCATCAGCGGTTACTATTTATATTTTCGAAAATTTAATCTGGCAAAGAGCAGA
AAAGGTGATTTCTAGTG-----------------------------------------------------AACAGCAGAG
ACTACAATGGTGCCTGTTTTGTACTCCTATCCATTTCTACGACAAGTAATTTGGGACGGAGGGAA-----TAGTATGTAT
CATATAAAATCATACAAAAAGTATA-ACCAGCGAGGCAATGAACACAAGGAGCTTA------------------------
-------------AACACACTGACCTTGATGAAAATGTTTTCTGTCGAAAAGGAGATGACTACAATGTTTGATAATCACC
TCTTTGGAGAGCAAATGATCCGGGGAAGGCCGTTTTTCGCAGAGGACTGAGAGAGATTTGGTGATGCTGCATGAGAATTC
CTCCCATTTCTCCTCTCTTCTTCCTCTGCCAAAGAACCGAAGCTGACCTCCTTGCTGCCCTCTAATGGAGTGACAGTA-T
GCTCTTACTCTCTGAGTGCTCTATCCTCTTTCTCAGCCACACGGAGATGGTAAATGATG----CAGTCCGTGAAGTTTTA
CATAAACACCCTCGTTAGAAAATGGACCTC-TTTTAGCGTCGATGGAGCAGAAAGGACCGTAGCTAACATGTGTCATTTT
GTTAGTTTTAAGGGATGCGAGGGGGCAGATGGCCAAAGAGGCAGCCTAATCCAGAAAGCTATCCATTGCAAGACCAAACC
ACGCCGACAGCGCGAATTTCGCGGCAAAATTTGAACTCCT------------CCCATGGCGACGCCCCTAGCCGCCTCCA
TTTCCAGCCACCTCCGAGCTCCGCCGCCATGGCCGCCTCCCAAGAGCACCAGCCAGAGAGCGAGGGTTCGGTGTGGCGTC
CTCGCACCGTCCGGCCAAGCCTCGGAGGCTGCCGCTCCTCCGAGGGACGCCGAGAAATCGCCAAACTGGCCCCCGAGTTC
CGACGTGAACCTGCGGATTCAGAGGCTGTGTCGGTCGGGTGACTTGGCGGAGGCTTTGCGGTTGCTCGGCTCGGATGGGG
TCGATGACCGCAGCTACGGCGCCGTCCTCCAGCTCTGCTCGGAGATGAGGTCGTTGGAGGGTGGGAAGAGAGCCCATTTC
CTGGTTCGGGCATCCGGCCTTGGAATAGATGGAATGGACAGTGTTCTCGGGCAGAAATTGGTGCTGATGTACTTGAAGTG
TGGGGACTTGGGGAGTGCAAGAAGGGTGTTTGACGAAATGCCTCAGGTAGGCGATGTGCGTGTTTGGACTGCTCTGATGA
GCGGTTATGCCAAGGCCGGCGATTTACGAGAAGGTGTGTTGCTGTTTAGGAAGATGCACTGCTGTGGGGTTCGACCGGAC
GCGTACACCATTTCCTGCGTCTTGAAGTGCATTGCTGGTTTGGGCAGTATCGCGGATGGCGAGGTAGTTCATGGGTACCT
TGAGAAGTTGGGTTTTGGCTCGCATTGTGCAGTTGGAAATGCGTTGATGGCTCTGTACTCAAGGTGTGGCTGTAACGAGG
ATGCTTTGCGGGTCTTTGAAGGAATGCCTCAGCGGGATGCTATTTCTTGGAATTCTGTGATCAGTGGATGCTTTTCAAAT
GGATGGCATGGCAGGGCTGTTGAGCATTTAAGCGAAATGTGGTTTGAAGGCCTGGAGATCGATTCTGTGACGATGCTCAG
TGTTCTGCCTGCCTGTGCTGAATTAGGTTACGAGCTTGTTGGAAGAGTGATTCATGGGTACTCTGTGAAAACTGGATTAC
TGTGGGAGCTTGAGTCTTTGGAGAGAGGAGTAGATGAAAATCTGGGATCCAAATTGGTATTCATGTATGTGAAATGTGGT
GAATTGGGCTATGCACGAAAGGTATTTGATGCAATGTCATCGAAAAGCAGCATACACGTGTGGAATCTACTGATGGGTGG
GTATGCAAAGGTTGGTGAATTTCAAGAAAGCCTATTTCTTTTTGAGAAAATGCATGACAGTGGAATTGCTCCGGATGAGC
ACACCGTTTCATGCCTTGTGAAGTGCGTCACTAGTTTGTATAGTGCTAGGGATGGCCTAGTGGTTCATGGGTATCTTTTG
AAGTTGGGTTTTGGTGCACAGTGTGCAGTTTGCAATGCAATGATATCATTCTATGCGAAATCCAATATGACTGAAGAAGC
ACTCTTGGTATTTGATGGAATGCCTCATCGAGATGTCATTTCTTGGAATTCTATCATCAGTGGCTGCACTTTCAATGGAT
TACACAGCAGAGCTATTGAGCTATTTGTAAGAATGTGGTTACAAGGACAGGAGTTGGATTCAGCCACATTGTTAAGTGTT
TTGCCTGCTTGTGCACAGTTGCGCCATTGGTTTCTAGGGAGAGTAGTTCATGGGTATTCTGTGAAAACTGGATTGATCGG
CGAAACATCTCTCGCTAATGTTCTTCTTGATATGTACTCAAATTGCTCAGATTGGCGTAGCACCAATAAGATATTCAGAA
ATATGGATCAGAAAAATGTTGTCTCATGGACAGCAATAATTACGAGTTATACCAGGGCTGGTCTTTTTGACAAAGTGGCT
GGGTTACTCCAAGAAATGGCATTAGAAGGTATCAGACCAGATACCTTTGCAATTACCGGTGCTCTTCATGCTTTTGCTGG
TAATGAATCGCAGAAACATGGCAAATCTGTACATGCATATGCCATCAGAAATGGAATGGAGAAGGTTCTTCCTGTTACCA
ATGCGCTAATGGAAATGTATGCCAAATGTGGAAAGATGGAGGAAGCAAGGTTGATTTTTTATGGTGCAGCGAGTAAGGAT
ATGATATCATGGAATACACTGATAGGAGGTTACTCCAGGAATAATCTTGCCAATGAAGCGTTCAGTTTGTTCACTGAAAT
GCTGCTCCAATTCAGACCTAATGCCGTGACCATGACCTGCATCCTTCCTGCTGCGGCAAGCCTTTCATCCCTGGAGCGAG
GCAGAGAGATGCACACCTATGCCCTACGAAGAGGGTACTTGGAAGACGATTTTGTAGCCAACGCCCTCATGGACATGTAT
GTTAAGTGTGGTGCATTGCTGCTATCTCGACGGCTGTTTGACAGGTTGAGCAGCAAGAACCTCATCTCATGGACCATCAT
GGTAGCGGGATATGGCATGCATGGCCGTGGCAGGGATGCCATTGCTCTCTTTGAGCAGATGAGGACCAGTGGCATTATGC
CAGATGCAGCCTCGTTCAGTGCCATACTGTATGCTTGCAGCCATTCAGGTCTGAGAGACGAGGGATGGAGATTCTTCGAT
GCGATGCGTCGTGAACACAGAATAGAGCCCAGGCTGAAGCACTACACCTGCATGGTTGACCTACTAACCAACACCGGCAA
TTTGAGGGAAGCTTACGAGTTCATCGAGTCGATGCCAATCGAGCCAGATTCAAGCATATGGGTCTCATTGCTGAATGGAT
GCAGAATTCACAGGGATATCAAGCTTGCAGAGGAGGTAGCAGAGAGGGTCTTTGAACTGGAACCTGAAAACACCGGGTAC
TACGTTCTTCTTGCCAACATATATGCTGAAGCTGAGAGATGGGAGGCTGTAAGGAAGCTCAGGAACAAGATCGGCGGCCG
AGGACTCCGGGAGAAAACTGGCTGCAGCTGGATTGAGGCCAGGGGCAAAGTTCAGGTCTTCATCGCGGGCAACCGGAATC
ATCCGCAGGGGGAGAGGATCGCAGAGTTCCTGGATGAAGTTGCCAGAAGAATGCAGGAAGAAGGCCATGACCCGAAGAAG
AGATATGCTCTGATGGGCGCTGACGACGCGGTGAACGGCGAATCACTCTGCGGTCACAGCTCGAAGCTCGCCGTCGCGTT
TGGGGTGCTGAATCTGTCGGAAGGGCGCCCGATCCGCGTGACGAAGAACTCGAGGGTTTGCACCCACTGCCACGAGGCCG
CCAAGTTCATATCCAAGATGTGCAGCAGGGAGATCATACTGAGGGATTCCAACAGGTTCCATCATTTTGAACAAGGCAGG
TGCTCTTGCAGAGGTTACTGGTAACAACACCACTGCTATGTGACAGTAATTAGTGAATCGGCTTGCCAGCTGCAGCATGT
TCATAGCTGTTGCTAGAAATAT--TAGCATGTAATATCGCTGTA------------TCACAATCACAACGTTTGGGGACA
TGCCTTTGGCCCAGGTCTTTTCGCGCAGGATTCTCCAGAATCAAGATTCTGGAAAGCTGCCCACAGAATCTGCACTAGGA
TCCTAGTGAT--------AATCGATAGGGGTATTCTCCTATCTGAAACGTTTTCCTTTGAGGGAGTTGTCCAGAATCTTG
AGAATCCAGGTTTTGGGGGGATTTTGAGTTGCACTAGGATTCTCCAGAATTCTGCCAAGATATCCAAAGCAAAATCGAGC
TCTTTTGTTTTGTTGATTTTCCAGA-CCCAGATTCTCCAGAATCTGCTCAAAGGAACTGGGCCTTTGTAAGAAACAACAG
TTACAATTCTACGAAATCATATGGAGAACAAAAGATTTAAGCACATTTCACCATCTTTGATGAACTGCCAACACAAACCC
AATCATTCCATACTGAAACCATACATTTATAACACCAACACAACAAAGATATACATGTCTATCCTAGCAGCATATCAGAG
TACAAGATTTCAGTACCACATAACTTTTGTCTTACA--AAAAGATGGTTTCTGCAGATCCTCTTAAGTCATGTAC-----
------------------------TGTCATTTCACCAGGTCTAGCTGCAGCTGGCTTGAGTTCATATGAAGAGACAGGAG
TCGGGGCAAACATGGCACTGATGACCAGGAAACATGCTGTGTCATACCCCAGAAAACTGTCCATAAGGCAACACCGCGCA
TTTCTCCATCTATGGGAAATTATATACTTTGACCACCTTGGATGTGTCGCACACAATCAGGTTATCTGAATCAGTTGGAG
CAGTACACAACCAATTTACCTAAAACGATA--GATCAGATGTCAGTATTATGCCTAGAAATTTCAATGGCATAGTAACTA
ACAAAGTTTAATCTATATGTATTGGTGGTGTTAGTGCCA----TATCAAAAGACAATAATTAAAACAAAATTGAAGGTCT
AGTTATGACCTTTTTCTTCACATCAATATCCAACACCAGTTCACTATTGCTGCTTGTTTCAGGAGAAAATCCTTTGGACC
AATCCCATACTTTCAGTGATGCGTCATTACCACCTGAAACAAGGAACTTTCCCTTCTCGCGAAACGCTGAAAATGCCCTG
TTAAGTGGTT-
>chr3A_1
CTCCCGGGCGCCTTGGGCGAGTCCCTGGTAATGGCGGCCTGGATGCCGCTGAAGAACTCTATGAGCTCTTCTTTGCTGTG
CTTCTTGACCGCCATTCTTGAAGGCGGATACCCGTTGGCTTCGGATCTGACCGTCAGGGAAGATGAGCAGGGCAGAGAAC
CCCGCAGTGGAGCGCGATGGAGAGCAAAATCTGCAGATGCCACCGAATTCAGGGCTTCAGACTTCGCCATAAGATTTTTT
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--------------------------TCGGTCAGGTTGGAAGGGAGACTGAAACTAAGAGAGGGAGCCATG---GCAGAG
ACTGCAATGGTGCCTGTTTCCTATATATCATTAAAATTGTACTA------------------------------------
-----------GTACAAAATGTATTCACCAATGTGGCAATGCAGGCACAATGACTGCAATGGTGCCTGTTTCCTATATAT
CATTAAACGCACTAACTAACTAACCTTGATGAAGATGTTCTCTATCGAAAAGGAGATAACTACAATGTTTCACAATCACC
TCTTGGGAGAGCAAATGATCCGGGGAAGGCGGCTTTTCGCAGAGGACTGGGAGAGATTTGGTGATGCTGCATGAGGATTC
CTCCCATTTCTTCTCTCTCCTTCCTCTACCAATGAACCGAAGCTGGCCTCCTTGCTGTTCTCCAATGGAGTGACAGTTGC
GCTCTTGTTCTGTTTGCGCTCTATCCTCTTCCTCAGCCACACGGAGGTGGTAAATGATG----CAGTCCATGAAGTTTTA
CATAAACACCCTCGTTAGAGAAATGGTCTTTTTTTAGCATCGATGGAGTAGAAAGGACCGTAACTAACTTGTGTCATTTT
ATGAATTTTCCGGAATGCGAGGGAGCAAATGGCCAAAGAATCAACCTAATCCAGAAAGCTATCCATTGCGAGACCAAACC
ACGCCGACAGCGCCAATTTCGCGGCAAAATTTGAACTCCTCTGCCTCCAGCTCCCATGGCGACGCCTCCAGCCGCCTCCA
TTTCCAGCCACCCCCGAGCTCCGCAGCCATGGCCGCCTCCCAAGAGCACCAGCCAGAGAGCGAGGGTCCGGTGTAGCGTC
CTCGCACCGTCCGGCCAAGTCTTGGAGGCAGCCGCTTCTCCGAGGGACGCCGAGAAATCGCCAAACTGGCTCCCGAGTTC
CGACGTGAACCTGCAGATTCAGAGGCTGTGTCGGTCGGGTGAGTTGGCGGAGGCTTTGAGGTTGCTCGGCTCGGCTGGGG
TCGACGACCGGAGCTACGGCGCCGTCCTCCAGCTCTGCTCGCAGATGAGGTCGTTGGAAGGTGGGAAGAGAGTTCATTTC
CTGGTTCGTGCATCTGGCCTTGGAACAAATGCAATGGACAGTGTTCTCGGGCAGAAATTGGTGCTGATGTACTTGAAGTG
TGGGGACTTGGGGAGTGCACGAAGGGTGTTTGACGAAATGCCTCAAGTGAGCGATGTGCGCGTTTGGACTGCTCTGATGA
GCGGTTATGCCAAGGCTGGTGATTTACGAGAAGGTGTGTCTCTGTTTAGTAGGATGCACTGCTGTGGGATTCGACCAGAC
GCATACGCCATTTCCTGCGTCTTGAAGTGCATTGCTGGTTTGGGCAGTATCGCGGATGGTGAGGTGGTTCATGGGTACCT
TGAGAAGTTGGGTCTTGGCTCGCAGTGTGCGGTTGGAAATGCATTGATGGCTCTGTACTCAAGGTGTGGCTGTAACGAGG
ATGCTTTGCGGGTGTTTGAAGGAATGCCTCAGCGGGATGCTATTTCTTGGAATTCTGTCATCAGTGGATGTTTCTCAAAT
GGATGGCATGACAGGGCTGTTGAGCATTTTAGCGAGATGTGGTTTGAAGGCCTGGAGATCGATTCAGTGACGATGCTCAG
TGTTTTGCCTGCTTGTGCTGAATTAGGTTATGAGCTTGTTGGAAGAGTGATTCATGGATACTCTGTGAAAACTGGATTAC
TCTGGGAGCTTGAGTCTCTGGAGAGAGGAGTAGATGAAAATCTGGGATCCAAATTGGTATTCATGTATGTGAAATGTGGT
GAATTAGGCTATGCACGCAAGGTGTTTGATGCAATGTCATCGAAAAGCGACATACATGTGTGGAATCTACTAATGGGTGG
GTATGCAAAGGTTGGTGAATTTCAAGAAAGCCTATTTCTTTTTGAGAAAATGCATGACAGTGGAATTGCCCCGGATGAGC
ACACCGTTTCATGCCTTGTGAAGTGCGTCACTAGTTTGTACAGTGGAAGGGATGGCCTAGTGGTTCATGGGTATCTTTTG
AAGTTAGGTTTTGGTGCACAGTGTGCAGTTTGCAATGCAATGATATCATTCTATGCGAAATCCAACATGACTGAAGATGC
AATCTTGGTGTTTGATGGAATGCCTCATCGAGATGTCATATCCTGGAATTCTATCATCAGTGGCTGCACTTTCAATGGAT
TACACAGCAAAGCTATTGAACTATTTGTAAGAATGTGGTTACAAGGACAGGAGTTGGATTCAGCCACATTGTTAAGTGTT
TTGCCTGCTTGTGCACAGTTGCACCATTGGTTCCTAGGGAGAGTGGTTCACGGGTACTCTGTGAAAACTGGGTTGGTAAG
TGAGACATCTCTTGCTAATGTTCTTCTCGATATGTACTCAAATTGCTCAGATTGGCGTAGCACCAATAAGATATTCAGGA
ACATGGATGAGAAAAACGTTGTCTCATGGACAGCAATAATTACAAGTTATACCAGGGCTGGTCTTTTTGACAAAGTGGCT
GGGTTATTGCAAGAAATGGCACTAGATGGTATCAGACCAGATACCTTTGCAATTACCAGTGCTCTTCATGCTTTTGCTGG
TAATGAATCGCTGAAAGATGGCAAATCTGTCCATGGATATGCCATCAGAAATGGAATGGAGAAAGTTATTCCTGTTACCA
ATGCGCTGATGGAAATGTATGCGAAATGCGGAAATATGGAGGAAGCAAGGTTGATTTTTGATGGCGTGACGAGTAAGGAT
ATGATATCATGGAATACGCTGATAGGAGGTTACTCCAGGAATAATCTAGCCAATGAGGCTTTCAGTTTGTTCACTGAAAT
GCTGCCCCAGTTCAGACCTAATGCCGTGACCATGACCTGCATCTTTCCTGCCGCGGCAAGCCTTTCATCCCTGGAGCGGG
GCAGAGAGATGCACACCTACGCCTTACGAAGAGGGTACTTGGAAGACGAATTCGTAGCCAACGCCCTCATGGACATGTAT
GTTAAGTGTGGTGCATTGCTGCTAGCTCAACGGCTGTTTGACAGGTTGAGCAACAAGAACCTCATCTCATGGACCATCAT
GGTAGCGGGATATGGCATGCATGGCCGTGGCAGGGATGCCATTGCGCTCTTTGAGCAGATGAGGGCAAGTGGCATTGAGC
CGGATGCAGCCTCTTTAAGTGCCATACTGTATGCCTGCAGCCATTCAGGCCTGAGAGACGAGGGATGGAGGTTCTTCGAT
GCGATGCGTCGTGAACACAAAATAGAGCCCAGGCTGAAGCACTACACCTGCATGGTTGACCTACTAACCAACACCGGAAA
TTTGAGGGAAGCTTACGAGTTCATCGATTCGATGCCGATCGAGCCAGATTCAAGTATATGGGTCTCATTGCTGAATGGAT
GCAGAATTCACAGGGATATCAGGCTTGCAGAGGAGGTAGCAGAGAGGGTCTTTGAACTGGAACCTGAAAACACCGGGTAC
TACGTTCTTCTTGCCAACATATATGCTGAGGCTGAGAGATGGGGGGCTGTAAGGAAGCTGAGGAACAAGATCGGCGGCGG
GGGGCTCCGGGAGAAAACTGGCTGCAGCTGGATTGAGGCCAGGGGCAGGGTTCAGGTCTTCGTCGCAGGCAACCGGAGTC
ATCCACAGGGGACAAGGATTGCGGAGTTCCTGGATGAAGTTGCCAGAAGAATGCAGGAAGAAGGCCATGATCCGAAGAAG
AGATATGCTCTGATGGGCGCCGACGACGCGGTGAACGGCGAGGCACTCTGTGGCCACAGCTCAAAGCTCGCCGTCGCGTT
CGGGGTGCTGAATCTGTCGGAAGGGCGTCCGATCCGCGTGACGAAGAACTCGAGGGTTTGCACTCACTGCCACGAGGCTG
CCAAGTTCATATCCAAGATGTGCAGCAGAGACATCATATTGAGGGATTCGAACAGGTTCCATCATTTTGAACAGGGCAGG
TGCTCTTGCAGAGGTTACTGGTAGCAAAACAACTGCTGTGTAACATGTGTTGCATTTCATTTACAGATGAGGTGTTCTTG
TAGTACTATCATTGTACCATGCTGATTCCCTTGTTACAGTACGAAGAGGTTGCCTGTCACATTCACAACGTTGGGGGAAA
ATGA----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CTTTGTAAGAAACATCAG
TTACAGCTCTACAAAATCAGAAGGAAACCAAAAGATTTAAGCACATTTCTCTATCTTCGATGAACTACCTACACAAACCC
AATCGTTCTATACCGAAACCATAAATATATAATGCC-ACGCAACAAAGACATACATGTCTATTCTAGCAGCACATCAGAG
CACAAGATTTCAGTACCACATGACTT--GTCTCATTACAAACAAGAGTTTCTGCAGGGCTCTAGAGTCCCATATAATGAT
ATCCCAAAAGAAGAACCAACTGCTTGTCATTTCACTAGGACTAGTTGCAGTTGGATTGGGTTCATGAGTCAGGGCC----
------------------------------AACATGCTGTGTTATAACCCAGGAAACTGTCCATAAGGTGACACCGCACA
TTTCTCCATCTATGGGAAATTATATACTTTGACCACCTTGGATGTGTCACACACAATCAGGTTATCTGAATCAGTTGGAG
CAGTACACAACCAATTTACCTGCCAAGATATGGATCAGAGATCAGTATTATGCCTAGAAATCTCAATGGCAAGATAACCA
ACAAGATACG--------GTATTGGCGTTGTTAGTGCCACATCTAGCAAAAGACAATAATTCAAACAAAACTGAAGGTCT
AGCTACAACCTTTTTCTTCACATCAATATCCAACACCAATTCACTATTGCTGTTTGTTTCAGGAGAAAATCCTTTGGACC
AATCCCATACTTTCAGTGATGCGTCGTTACCACCTGAAACAAGGAACTTCCCCTTCTCACCAAACGCTGAAAATGCTCTG
TTAAGTGG---
>SNPs
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
------------------------------------------S-------------------------------------
-S----------------------------------------S-------------------------------------
------------------------------------S--------------S--S---------SSSSSS----------
--------------------------------------S---S-------------------------------------
-----------------------------------------S--------------------------------------
-----------------------S----------------------S--S---------------------------S--
--------------------------------------------------------------------------------
----------------------------------------------------------SSSSS-----------S-----
-S-----------------------S-S------------------------------S---------------------
--S--------------S-----------------------------------------------S--------------
---------------------------------------------------------------------S--S-------
--------------------------------------------------------------------------------
-----S-----------------------------------------------------------------------S--
----------------------S----------------S----------------------------------------
-------------------------S------------------------------------------------------
------------------------S----------------------S-----------------------S--------
---------------------------------S-----------------S----------------------------
-------------------------------------------------------------------------S------
-----------------------------------------S--------------------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-------------------S------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S---------------------------------------S---------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S---------------------------------------------------------SS--
----------------------------------S----------------------------------S----------
S----------------------------S--------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
-------------------------------------------------------------------------S------
-----------------------------S--------------------------------------------------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
-------------------------------S------------------------------------------------
----------------------SS--------------S-----------------------------------------
--S---------S-S------S----------S--------------------S------S-------------S-----
---------SSSSSSSSS----S-----S----------S--------------S-------------------------
-----------------S-------------------------------------------S---S-------S-----S
--------------------S----S--------------------------S---------------------------
---------------S----------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S-----------------------------S----------------
--------------------------------------------------------------------------------
--S---------------------------------S-------------------------------------------
------------SSS-----------------------------------------------------------------
----------------------S---------------------------------------------------------
---------SSS------------------------------------------------S-------------------
---S----------------------------------------------------------------------------
-------------------------------------------S------------------------------------
----------S
>forward_523
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-----------------------ATAACCAGCGAGGCAGTGAG-------------------------------------
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>reverse_1488
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-----------------------------------------------TGGGCAGAAATTGGTGCTGA-------------
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>forward_1303
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---CGTGAACCTGCAGATTCAGC---------------------------------------------------------
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>reverse_3075
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----------------------------------CATGGAGGAAGCAAGGTTGA--------------------------
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>forward_2313
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-----------------------------------------------------ATGACAGTGGAATTGCCCCC-------
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>reverse_3394
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---------------------------------TTGTTTGACAGGTTGAGCAGC--------------------------
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>forward_3236
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---------------ACCTAATGCCGTGACCATGAG--------------------------------------------
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>reverse_5123
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--AGGGCAAACATGGCACTGAT----------------------------------------------------------
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--------------------------------------------------------------------------------
-----------
