>input_sequence_19444
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--------------------------------------------------CCCGATCCCCGAGTTAAAGCAGGACGCGCC
TCGATTCCCGGCACACGAGCCGGCGAGCCGCGCAGCCTTCGACCCCGAGGGGAACCGCTCACCGGAGCACCACCGACCCG
CGGGCATGGCCGAGGAGGGGAAGCACCTGGAGACGGGCCGGGCCGACCGCTCCGTCTGGCTCATGAAGTGCCCGACCATC
GTCTCGCGCGCCTGGCAGGAGGCCGCCGCCGCCGCCGCCG------ATGCCGGAGGTCCCAACCCTAACCCTAACCCCGT
CGTCGCCAAGGTCATCCTCTCCTTCGACCCGCTCAGCACCGACGAGGACCCGAACCAGGCAAGAGTCTCCCCCATCGCTC
CCGTTTGCGTGGCTTTGCCTCCATCGAAACGTAGCCGCTAAGTTATTCCAATGTATGTTGTTTGGGGTTGTGGTGGGCAG
AAGGTGAGCTCCGAGATAAGATCAGCTAACCCCTACTAGAATCGCATTGCCTAAACGATGATGAACTATTGGATTTTCTT
TCTGTCTTAAGCACGAACTTTTCTGTCCAGGCGCATTACTAGAAGG-----------TTGCCTTCAGCTGCGTTACTGTA
TGCTTTAATTGATGTTAGTTTTTCAGATATGTAACGCCTGTCTCTAGTCCGTATGTTTCACCTCGAAGTGCCATGGGTAA
CTTATTTTTCGAGACTTAACTCGATCAATTTGAGCAATTATAGCACTGCACTTTGGATCTTGATATATAATGTATGTGTG
TTATTCAGAATTTTTCAGCTATCACTCTCTGATGAATTATGAGCATAAAATTTGTCGGTAGTTTCTGGGAGAAAAGCCTA
TGCAGTCTGGAGGCATTAAGCAACATTCTGGACTGTAACAAATCGTGAAAGGGCTTAGCATAACTGCGTAAGCATGTATG
CTCTACAACGAGGCTTAAAAACTAACGCTATCTCTGGTGGTTAAACAGTAGTGCC-TGTACATGTCTTTTCCATTTTTCC
CTTCCAGAACTCGGTTGTCAGTTTTTATGCCTACAGTCATATAAATGTTGTTCATCCATCTCCTCTCTCTTTGTGCCCCA
GTTTCCCCAGAGGCCATAAGACAGCACTGTTCACTAAATTTGTATAATAACATCCATTTGAGATGTTTTTGTTATGGTAC
CTATGTTTCTTATACGGTGTTAGTGAAATAACAGTTCAAGATGGAGATGGCTCAAACTAACAATGGCAACACACCGAAGA
ATTACTCTTTGAATATGTTCAAGGATTTTGTGCCAATGTGTGTTTTCTCTGAGTCTAACCAAGGTAATATGCTGTCTTTA
ACCTTTTTATTGTATCAACATGCATTTAATTTATTTTTCTCAGAAAA--CGTTGAGATCAGTTGTTTCCGTAAGTGAGAA
ATAAACAATGCTTGTTTTACCAATATATGCTTCTTAATGTAATAATAATATGTATTGCATTGTCTAATTTGGTTCAGAAG
CTAGTTACACCTCATGCCAACGAACCCCACCGTAGTCCTGAAATTAAGGTGTTTAATAAATTCTAGAGT-CCGAGTCCTC
AGGCCCCAATTATCTATAGTTATTGCCTTATTGGCATAGTTGAGCTTTGTTTTGGGAAACGACCAGGAGCTCTAGCTATT
CATTAAGTAGGAAAAGAATTGGCACAGTTTATA-TATAGTCCAGGTCTGATTGT------ACATATTGTGATATTGGGAT
AGTGCTAATTTGTCGATATCATTATACTGTCAGGCTGCTCACAAATCGGGTCCTCTTGTCGAACTATTTCCTTCTATAAG
TCTGTTTAGTTTGAACTTGCTCTTTAAGCACCTTGTTGATGTTTCAGTTCTAATTAATCCACTCAATATATGGTTTGTTG
TGGGCTCTCTACTTTTTAGATTTTGCAAGCAACTTCATACGTAGTCATTTCAGTATACCTGCTGGCTCATATCATGTGTA
TCCCATCACATACGTGTTTCCATAAAGC-ATCACACGAAGCTCAG-----------------------------------
----------------------AAATCCTATTTGCTAGTTGATGGCTAGTTAATTATATATTTGGCCTTTGGTTTATCGT
GCCTGTTGGATGTTTCCCTTTAACAG---GGTTAAGGGCAATAACTAACGTTTAACTGTACTGCTTTTAGTATCCATTTT
TTCTGTACAGTTTCTTGGTTGTGTCTTGTTACGTCGTACTGGCATCACATACGTTTTATGCTGTTGCCTTTGGAAGTTTT
TTTGGTAGATTCTCCTCTACCACATGTTATATGCACCCTGCTGAACCAATACAATTTACACAAGCTGTTTA---------
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----------------------------------------TTCGGAACAACACAGCACTAA-TTTTTTTTCTGCGTCACA
TAATTACTGCGTTCTGTTTATTTCAGGGAAGCTTGCATGCGAAGGAAAAGTCGAGCACAAATTTGACATGGAACCGCACA
AAGAAAACCTTTCAGACTATGCAAAATTATGCCGTGAGAGGACTAAAAATTCTATGATTAAAACAAGAAAAGTGCATGTG
AGAATTTTAATTTGATCTTGCCCTTTTCTGTCTCTTACATCTTCCAAGTGTTCTCATGTAAATTCACCTTTCCCCTTCAT
TTCTTTGTAGGTACTTGACAAGGAGCATGTGAATGTGCGCACAATGATTAGCATGATTGGTGGCGGGCCTCATTCTGGTC
CAAAGGTAGTCGTCCTTGCTCAAGATGGCTAAGACAACTCTCAAGATTGCTAGGGGTCTTGAGAGTACTAATAAATGGTT
CTGAAGTTAGGATTTCCATCTTATACCTTACATGTTATGTTTTCAACAATTACCTTCTCTGGCAACAAAAGCATTCCCAG
TAAACAGATCATTTGAATTGGTCTTCTTTTAAGAGTCTCATCACTCCTAATTTTCGTGCTTATCAGGACAAGAAGAAGCC
GGCGCCAACCAGAACTCCTGAAGTGAAAAGAACACGAAGGGATCGTGGGGATATTGAAAACATCCTATTCAAGTTATTTG
AGAGGCAGCCGAATTGGTCACTGAGGCATCTAATGCAGGAAACTGATCAACCAGAGGTATTTTGCCTGATTCCTAGCTAG
AAGCATTTATTTACTGATAAGACGTTGATCCGTTGCTTGCTACAGTTACTGCATTCATTTGTGACCTGATGGCACCTTAT
TCATGCAGCAATTCCTGAAGGAGATAATGAACGATCTTTGCGTCTACAACAAGAGAGGGCCGAATCAAGGGACGCATGAG
CTCAAGCCTGAATACAAGAAGTCTGTTGAGGACACTAGCGCGACCTGAAGTCTATATCATCTCTTATGATATGCTATACC
TGAGAGCTAGAAGCCCGTATGCTCTGATAAGTTGAATGTGGGTCATTGACAGATTCTGACTCCAGCCTGTTAGTTGCTGA
TGAATCGCGTATGCTTCATCTGGTTGTTCTTTGCAAAAGTAA-TTTCTATGCTGTATAAGCCTCGAGATATCTTGTTATA
CCACGGTTTGCCGTATCAAAGATCCTGAGTTTTCAGCATCCTTGTGTCCCGAAGGAAAAGTTGTTGATGTTTCTGTGTAT
AAGAAGTCTTGGTCTTC---------------------------------------------------------------
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>chr3D_1_TraesCS3D01G307800
CAGAGTCTTCACATCAATTTCATCAAAAGCCATATTATTTTCATCACCAAATTCTTCAGTTGAAGAAATATATTTTTAAG
GGTCGTCTTTCATGGGTTAAACCAAATCTTCAGGGACTATAACTCCT---------------------------------
------------------AATCACTAAGGGGCACTTGATGCACTTACACTTTACAACAACGATCAATACATTTTTCTTAG
ATTTAACTCAATATAAACATAGCTCATACTATGAACATGAAAGAAACTCTATACGGATGTATCTCGCAGTGTACCAGGTA
ATTACAATATCTATAGCGGCGTCTAGGAGCCATTCTAGGCCACACATTTTACAAGCAATTCTTTGTTGAAGGAATAGAGT
AGGAGCTTACCCACAAACGACCTAAACAAGAAATACCGCAACCCATCCACATGACA-----CACATGCATCTGATGGGTT
CTCTCTGTTTTTTCAGGAGCTCCTA-TTTGTCGCACAGGCGACCCCCTCACAACTGGGCCTGCCCATGTAGCGAAGCTAG
TGTATAGCAAGCGCTCAAATGTTTTTT-CTTCAGTTTTTGTTACAGTTTTTTAGGGAAATAAAAAATACTTATTT-----
TTTAAAATGA--TTTTTTAGACACAAAAAATTTG--TAAAATTAAAAATATTTTTTGATTTTGTAGAGAACTAAACAATT
TTTGAAATTTGGGT-CTTTTTAGAAGTT-TTTTTAATTGAATATTTCTTAAAAATTATGAACATTTT---AAATTTCGAT
CATT-AAAAAATATGAACAAC----AACACATTCATTTTTTT--AAATTTTGAATATATTTTAGAAATAAAACAAAAAAA
CCGGTAA-----------AAAAACTCTATAAAATCGACCAGAATCTTTTAGAAGGTGTTACACTGGCTAAGGTAAATGGG
CTGGCCCAGTGGCTCGCTACTGCTCGGTGTATGGGATTGTCTGGCAATCTGCCGCACAGAGCGGCAAATAGGAAAAGCCC
TGTTTTTCCTAGTGTACAATACCCACCGCCTCTTCCCGTCGCCAAACCGTCCCGATCCCCGAGTTAAAGCAGGACGCGCC
TCGATTCCCGGCACACGAGCCGGCGAGCCGCGCAGCCTTCGACCCCGAGGGGAACCGCTCACCGGAGCACCACCGACCCG
CGGGCATGGCCGAGGAGGGGAAGCACCTGGAGACGGGCCGGGCCGACCGCTCCGTCTGGCTCATGAAGTGCCCGACCATC
GTCTCGCGCGCCTGGCAGGAGGCCGCCGCCGCCGCCGCCG------ATGCCGGAGGTCCCAACCCTAACCCTAACCCCGT
CGTCGCCAAGGTCATCCTCTCCTTCGACCCGCTCAGCACCGACGAGGACCCGAACCAGGCAAGAGTCTCCCCCATCGCTC
CCGTTTGCGTGGCTTTGCCTCCATCGAAACGTAGCCGCTAAGTTATTCCAATGTATGTTGTTTGGGGTTGTGGTGGGCAG
AAGGTGAGCTCCGAGATAAGATCAGCTAACCCCTACTAGAATCGCATTGCCTAAACGATGATGAACTATTGGATTTTCTT
TCTGTCTTAAGCACGAACTTTTCTGTCCAGGCGCATTACTAGAAGG-----------TTGCCTTCAGCTGCGTTACTGTA
TGCTTTAATTGATGTTAGTTTTTCAGATATGTAACGCCTGTCTCTAGTCCGTATGTTTCACCTCGAAGTGCCATGGGTAA
CTTATTTTTCGAGACTTAACTCGATCAATTTGAGCAATTATAGCACTGCACTTTGGATCTTGATATATAATGTATGTGTG
TTATTCAGAATTTTTCAGCTATCACTCTCTGATGAATTATGAGCATAAAATTTGTCGGTAGTTTCTGGGAGAAAAGCCTA
TGCAGTCTGGAGGCATTAAGCAACATTCTGGACTGTAACAAATCGTGAAAGGGCTTAGCATAACTGCGTAAGCATGTATG
CTCTACAACGAGGCTTAAAAACTAACGCTATCTCTGGTGGTTAAACAGTAGTGCC-TGTACATGTCTTTTCCATTTTTCC
CTTCCAGAACTCGGTTGTCAGTTTTTATGCCTACAGTCATATAAATGTTGTTCATCCATCTCCTCTCTCTTTGTGCCCCA
GTTTCCCCAGAGGCCATAAGACAGCACTGTTCACTAAATTTGTATAATAACATCCATTTGAGATGTTTTTGTTATGGTAC
CTATGTTTCTTATACGGTGTTAGTGAAATAACAGTTCAAGATGGAGATGGCTCAAACTAACAATGGCAACACACCGAAGA
ATTACTCTTTGAATATGTTCAAGGATTTTGTGCCAATGTGTGTTTTCTCTGAGTCTAACCAAGGTAATATGCTGTCTTTA
ACCTTTTTATTGTATCAACATGCATTTAATTTATTTTTCTCAGAAAA--CGTTGAGATCAGTTGTTTCCGTAAGTGAGAA
ATAAACAATGCTTGTTTTACCAATATATGCTTCTTAATGTAATAATAATATGTATTGCATTGTCTAATTTGGTTCAGAAG
CTAGTTACACCTCATGCCAACGAACCCCACCGTAGTCCTGAAATTAAGGTGTTTAATAAATTCTAGAGT-CCGAGTCCTC
AGGCCCCAATTATCTATAGTTATTGCCTTATTGGCATAGTTGAGCTTTGTTTTGGGAAACGACCAGGAGCTCTAGCTATT
CATTAAGTAGGAAAAGAATTGGCACAGTTTATA-TATAGTCCAGGTCTGATTGT------ACATATTGTGATATTGGGAT
AGTGCTAATTTGTCGATATCATTATACTGTCAGGCTGCTCACAAATCGGGTCCTCTTGTCGAACTATTTCCTTCTATAAG
TCTGTTTAGTTTGAACTTGCTCTTTAAGCACCTTGTTGATGTTTCAGTTCTAATTAATCCACTCAATATATGGTTTGTTG
TGGGCTCTCTACTTTTTAGATTTTGCAAGCAACTTCATACGTAGTCATTTCAGTATACCTGCTGGCTCATATCATGTGTA
TCCCATCACATACGTGTTTCCATAAAGC-ATCACACGAAGCTCAG-----------------------------------
----------------------AAATCCTATTTGCTAGTTGATGGCTAGTTAATTATATATTTGGCCTTTGGTTTATCGT
GCCTGTTGGATGTTTCCCTTTAACAG---GGTTAAGGGCAATAACTAACGTTTAACTGTACTGCTTTTAGTATCCATTTT
TTCTGTACAGTTTCTTGGTTGTGTCTTGTTACGTCGTACTGGCATCACATACGTTTTATGCTGTTGCCTTTGGAAGTTTT
TTTGGTAGATTCTCCTCTACCACATGTTATATGCACCCTGCTGAACCAATACAATTTACACAAGCTGTTTA---------
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----------------------------------------TTCGGAACAACACAGCACTAA-TTTTTTTTCTGCGTCACA
TAATTACTGCGTTCTGTTTATTTCAGGGAAGCTTGCATGCGAAGGAAAAGTCGAGCACAAATTTGACATGGAACCGCACA
AAGAAAACCTTTCAGACTATGCAAAATTATGCCGTGAGAGGACTAAAAATTCTATGATTAAAACAAGAAAAGTGCATGTG
AGAATTTTAATTTGATCTTGCCCTTTTCTGTCTCTTACATCTTCCAAGTGTTCTCATGTAAATTCACCTTTCCCCTTCAT
TTCTTTGTAGGTACTTGACAAGGAGCATGTGAATGTGCGCACAATGATTAGCATGATTGGTGGCGGGCCTCATTCTGGTC
CAAAGGTAGTCGTCCTTGCTCAAGATGGCTAAGACAACTCTCAAGATTGCTAGGGGTCTTGAGAGTACTAATAAATGGTT
CTGAAGTTAGGATTTCCATCTTATACCTTACATGTTATGTTTTCAACAATTACCTTCTCTGGCAACAAAAGCATTCCCAG
TAAACAGATCATTTGAATTGGTCTTCTTTTAAGAGTCTCATCACTCCTAATTTTCGTGCTTATCAGGACAAGAAGAAGCC
GGCGCCAACCAGAACTCCTGAAGTGAAAAGAACACGAAGGGATCGTGGGGATATTGAAAACATCCTATTCAAGTTATTTG
AGAGGCAGCCGAATTGGTCACTGAGGCATCTAATGCAGGAAACTGATCAACCAGAGGTATTTTGCCTGATTCCTAGCTAG
AAGCATTTATTTACTGATAAGACGTTGATCCGTTGCTTGCTACAGTTACTGCATTCATTTGTGACCTGATGGCACCTTAT
TCATGCAGCAATTCCTGAAGGAGATAATGAACGATCTTTGCGTCTACAACAAGAGAGGGCCGAATCAAGGGACGCATGAG
CTCAAGCCTGAATACAAGAAGTCTGTTGAGGACACTAGCGCGACCTGAAGTCTATATCATCTCTTATGATATGCTATACC
TGAGAGCTAGAAGCCCGTATGCTCTGATAAGTTGAATGTGGGTCATTGACAGATTCTGACTCCAGCCTGTTAGTTGCTGA
TGAATCGCGTATGCTTCATCTGGTTGTTCTTTGCAAAAGTAA-TTTCTATGCTGTATAAGCCTCGAGATATCTTGTTATA
CCACGGTTTGCCGTATCAAAGATCCTGAGTTTTCAGCATCCTTGTGTCCCGAAGGAAAAGTTGTTGATGTTTCTGTGTAT
AAGAAGTCTTGGTCTTCTCTGCCTTATGGGGTGTTTGGATTGTGATCAAAGCCTACTCTACCAACTTTTTGGTTATGACC
AAAAATCCTTGTTTGGATGATACCAATCGTAATTGTTTGTGCAGTTGTGCATTCCATTCCATTCCATGAACTTGCTGCAG
GCCTGCGAGTTATGCAACCTACCTGCTTTGGGTACTAGTACCGGATATGCATGCTGGAGTAGTAGAAAAGAAAGTTAGGG
AGCGTTCGGTAGCCTGCATGAATTTTAGGCACTTTGCATCTTTGTGGTTTGACTCAACCAGGCACTTTGCATCTGTGGTC
CGGCTCAACCAGGCTGAGATACAAAAGATCATGTTCTGCACACACTTTGTTTGCCTGCACCCCCTCTAGCCTAGCTGAGC
GGAAACAAAAGCATTGATGTTTGGTTGCAAGCTTGTTCTCCGCAGATGCAAAGTGTTGTTGTTTGGTTACATACAAGACA
ATGTGATCTGGTAATCTCTTGTTCGAGTGGTGAGGTTATAGG-------------------------------CAAGACA
ACTAATAACAGGCATAACATAAACCAGAGTCTTAAACTGTACTCACACACAGTTAAACTACTCC-----ATCTATATTAA
TTGTTGTTGATTTAGTACAAGAGGGAGTAACACACACTTACTAAAAGAGTC---ACCAGAGTCTCAAACTAATTGTCCAA
---------CTTAAACTAAAAGGCGCAAAGATAACACCTGAAGGGTCCATGGCAAATGCCTCTTCATGCTCCTTGCACTT
GGCCACCAACTCAACCACATCGTCATTGAAGACGATCACCAGCAAGGTGTCGGGACTCGGCAGCTTGAAAGGTGACGAGG
TACCCGATCTTGATATGGTGAGAAACGGTGAAGGGGGCCAAACCTTTATCAAGGGTGAGTCTGTTGTTGATCGTCCGGAC
CATGATCCTCCAGACGCAGCTGGTGCTCGTCCTCAGCACGAATTGTGGTGGGACAATGGTCAAGTGCTTGGTTAAGTCAC
AGGGCGGCAGACACTCCAACTAGGG
>chr3B_1
CAAAGTCTTCACATCAATTTCATCAAAAGAAGTATTATTTTCATCACCAAATTCTTCACTTGAAGAAATATATTTTTAGG
GGTTGTCTTCCATGGGTTAAACCAAATCTTCAGGGACTATAACTCATATGTACACTCACAAACACATTAGTCCCTCAACC
TTGTCTTCAATACTCCAAAATCACTAAGGGGCACTTGATGCACTTACACTTTACAACAATGATCAATACATATTTCTTAG
ATTTAACTCAATATAAACATGGCTCATACTATGAACATGAAATAAACTCTATATGGATGTATTTGGCAGTGTACTAGATA
ATTACAATATCTAGCGCGGCGTCTAGGAGCCATTCTAGGCCACTCGTTTTACAAGCAATTCTTTGTTGAAGGAATAGAGT
AAGAGCTCACCCACATACGACCTAAACAAGAAATACTGCAACCCATCCACATGACA-----CACATGCATCCGATGGGTT
TCTCTCTGTCATTTCGGGTGCTCCTATTTGTCGCACAGGCGACCCCCTCCCAACTAGGCCTGCCCAAGTAGCGAAGCTAC
TGTATAGCAAGTGCTCAGATGTTTTTTTCTTTAGGTTGTATTACGGTTTTTTAGGGAGATAAAACTTAT---TTT-----
TTTAAAATGAAGTTTTTTAGACACAAACAATTTTTCTAACATTAAAAATATTTTTTGATTTTTTAGAGAACTAATTTTTT
TTTGAAATTTGGGA-CTTTTTAGAAGTGCTTTTAAATTGAATATTTCTTAAAAATTATGAACATTTTTTGAAATTTTGCT
CACTAAAAAAATATGAACAACTTTTAACACATTCA-TTTTTTTGAAAATTTGAATATGTTTTAGAAATAAAACAAAAACA
AAATAAAGCCGGT-----AAAAACTGTATAAAATTGACCAGAATCTTTTAGAAGGTGTTACACTGGCTAAGGTAAATGGG
CGGC----------------------------------------------------------------------------
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>chr3A_155
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---------------------------------------------ACATTTTACAATAATGATCAATACATTTTTCTTAA
ATTTAACTCAATATAAATATAGCTCATACTATGAACATGAAAGCAACTCTACATAGATGCATCTGGCAGTGTACCAGCTA
ATTACAATATCTAGCGCGGCGTCTAGGAGCCATTCTAGGCCACACGTTTTACAAGCAATTCTTTGTTGAAGGAATAGAGT
AGGAGCTCACTCACAAACGACCTAAACAAGAAATACCGCAACCCATCCACATGACACACAACACATGCATTCGATGGGTT
TCTCTCAGTTTTTTCGGAGCTCCTC-TTTGTTGCATAGGCGAGCCCCTCCCGACTAGGCCTGCCCATGTAGCGAAGCTAG
TGTATAGCGAGCGCTCAGAAGTTTTTCAA-----GTTTTATTACGGTTTTTTAGGAAAATAAAAACTAT---TTTAATTA
TTTAAAATGAATTTTTTTAGACAGAAACAATTTG--TAAAATTGAAAATATG------TTTTTTGGAAAACTAAACAATT
TTTGAATTTTTTAGCCTTTTTAGAAGTGCTTTTTAATTGAATATTTCTTAAAAAGTATGAACATTTTTTGAAATTTAGAT
CATT-AAAAAATATGAACAACTTTTAACATATTCA-TTTTTT--AATTTTGGAATACTTTTTAGAAAGAAAATAAAAACC
AAAAAACAGGTAAACAAAAAAGATTGTATAAAATCGACCAGAAACTTTTAGAAGGTGTTACACTGTCTAAGCTAAATGGG
CTGGCCCAGTGGCTCGCTACTGCTCGGTGTATGGGATTGTCTGGCAATCTGCCGCACAGAGCGGCAAATAGGAAAAGCCC
TGTTTTTCCTAGTGTACTATGCCCACCGCCTCTTCCCGTCGCAAAACCGTCCCGGTCCCCGAGTTAAAACAGGACGCGCC
-CGATTCCCGGCACACGAGCCGGCGAGCCGCGCAACCTTCGACTCCGAGGGGAACCGCTCACCGGAGCACCACCGACCCG
CGGACATGGCCGACGAGGGGAAGCACCTGGAGACGGGCCGGGCCGACCGCTCCGTCTGGCTCATGAAGTGCCCGACCATC
GTCTCGCGCGCCTGGCAGGAGGCCGCCGCCGCCGCCGCCGCCGCCGATGCGGGAGGCCCCAACCCTAACCCTAACCCCGT
CGTCGCCAAGGTCATCCTCTCCTTCGACCCGCTCAGCACCGACGAGGACCCGAACCAGGCAAGAGCCTCCCCCTTCGCTC
CCGTTTGCGTGGCTTTGCCTCCATCGAAACGTAGCCGCTAAGTTATTCCAATGTATGTTGTTTGGGGTTGTGGTGGGCGG
AAGGTAAGCTCCGAGATAAGATCAGCTAACCCCTGCTAGGATCGCATTGCCTAAATGATGATGAACTATTGGATTTTCTT
TCTGTCTTAAGCACGAACTTTTCTGTCCAGGCGCATTACTAGAATGGTGAACTATGTTTGCCTTCAGTTGCGTTACTGTA
TGCTTTAATTGATGTTAGTTTTTCAGATATGTAAGGCCTGTCTCTAGTTCGTATGTTTCACCTCGAAGTGCCATGGGTAA
CTTATTTTTCGAGACTTAACTCGATCAATTTGAGCAATTATAGCACTGCACTTTGGATCTTGATATATAATGTATATGTG
TTATTCAGAATTTTTCAGCTATCACTCT--GATGAATTATGAGCATAAAATTTGTCGGTAGTTTCTGGGAGAAAAGCCTA
TGCAGTCTGGAGGCATTAAGCAACATTCTGGTCTGAAACAAATCGTGAAAGGGCTTAGCATAACTGCGTAAGCATGTATG
CTCTACAATGAGGCTTAAAAACTAACGCTATCTCTGGTGGTTAAACAGTAGTGCCTTGTACATGTCTTTTCCATTTTTCC
TTTCCAGAACTCGGTTCTCAGAGTC---------------ATAAATGTTGTTCATCCATCTCCTCTCTCTTTGTGCCCCA
GTTTCCCCATAGGCCATAAGAGAGCACTGTTCACTAAATTTGTATAATAACATCCATTTGAGATGTTTTTGTTAT-GTAC
CTATGTTTCTTATACGGTGTTAGTGAAATAACAGTTCAAGATGGAGATGGCTCAAACTAATAATGGCAACACACCGAAGA
ATTACTCTTTAAATATGTTCAAGGATTTTGTGCCAATGTGTGTTTTCTCAGAGTCTAACCAAGGTAATATGCTGTCTTTA
ACCTTTTTATGATATCCACATGCATTTAATTTATTTTTCTCAG--AA--CGTTGAGATCAGTTGTTTCCGTAAGTGAGAA
ATAAAGAATGCTTGTTTTACCAATATATGTTTCTTAATGTAATAATAATATGTATTGCATTGTCTAATTTGGTTCAGAAG
CTAGTTACACCTCATGCCAACGAACCCCGCCGTAGTCCTGAAATTAAGGTGTTTAATTAATTCTAGAATCCCGAGTCCTC
AGGCCCCAATTATCTATAGTTATTGCCTTATTGGCGTCATTGAGCTTTGTTTTGGGCAACGGCCAGGAGCTCTAGCCATT
CATTAAGTAGGAAAAGAATTGACACAGTTTATA-TATAGTCCAGGTTTGATTGTAATTGTACATATTGTGATATTGGGAT
AGTGCTAATTTGTCGATATCATTATACTGTCAGGCTGCTCACAAATTGGGTCCTCTTGTCAAACTATTTCCTTCTATAAG
TCTGTTTAGTTTGAACTTGCTCTTTAAGCACCTTGTTGATGTTTCAGTTCTAATTAATCCACTCAATATATGGTTTGTTG
TGGGCTCTCTACATTTTAGATTTTGCAAGCAACTTCATACGTAGTCATTTCAGTATACCGACCGACTCATGTCATGTGTA
TCCCATCAAATACGTGTTTCCATAAAGCTATCACACGAAGCTTCAGTCAGTACATGATCATGCTATAGCTCAGAAATCCT
ACTTGCGATTCTCAAAAAAAAAAAATCCTACTTGCTAGTTGATGGCTAGTTAATTATATATTTGGCCTTTGGTTTATCAT
GCCTGTTTGATGTTTCCCTTTAATAACAAGGTTAAGGGCAATAACTAACGTTTAACTGTACTGCTTTTAGTATCCATCTT
TTCTGTACAGTTTCTTGGTTGTGTCTTGTCATCTCGTACTGGCATCAGATACATTTTATGCTGTTGCCTTTGGAAGTTTT
TGTGGTAGATTCTCCTCTACCACATGTTATATGCACCTTGCTGAACCAATACAATTTACACAAGCTGTTTATTCGGAACA
ACACAGCACTAATTTTCTCTGCATTGCACTTTGCAGGGGTAAGACTAGGTTCCTATAATCCCTCCCCAGACCCCACCTTG
TATGGGAGCTTCTATGCACTGGGTCTGTCCTGTCTGTTTATTCGGAACAACACAGCACTAA-TTTTTTTTCTGCGTCACA
TAATTACTGCGTTCTGTTTATTTCAGGTAAGCTTGCATGCGAAGGAAAAGTCGAGCACAAATTTGACATGGAACCGCACA
AAGAAAACCTTTCAGACTATGCAAAATTATGCCGTGAGAGGACTAAAAATTCTATGATTAAAACAAGAAAAGTGCATGTG
AGAATTTTAATTTGATGTTGCCCTTTTCTGTCTCTTACATCCTCCAAGTGTTGTCATGTAAATTCACCTTTCCCCTTCAT
TTCTTTGTAGGTACTTGACAAGGAGCATGTGAACGTGCGCACAATGATTAGCATGATTGGTGGCGGGCCTCATTCTGGTC
CAAAGGTAGTCGTTCTTGCTCAAGATAGCTAAGACAACTCTCAAGATTGCTAGGGGTCTTGAGAGTAGTAATAAATGGTT
CTGAAGTTAGGATTTCCATCTTATACCTTACATGTTATGTTTTCAACAATTACCTCCTCTGGCAACAAAAGCATTCCCAG
TAAATAGATCGTTTGAATTGGTCTTCTTTAAAGAGTCTCATCACTCCTAATTTTCGTGTTTATCAGGACAAGAAGAAGCC
GGCGCCAACCAGAACTCCTGAAGTGAAAAGAACACGCAGGGATCGTGGGGACATTGAAAACATCCTATTCAAGTTATTTG
AGAGGCAGCCGAATTGGTCACTGAGGCATCTAATGCAGGAAACTGATCAACCAGAGGTATTTTGCCTGATTC----CTAG
AAGCATTTATTTACTGATAAGATGTTGATCCGTTGCTTGCTACAGTTAATGCATTCACTTACGACCTGACGACACCTTAT
TCATGCAGCAATTCCTGAAGGAGATAATGAACGATCTTTGTGTCTACAACAAGAGAGGACCGAATCAAGGGACACATGAG
CTCAAGCCTGAATACAAGAAGTCTGTTGAGGACACTAGCGCGACCTGAAGTCTATATCATCTCTTATGATATGCTATACC
TGAGAGCTAGAAGCCCGTATGCTCTGATAAGTTGAATGTGGGTCATCGACAGATTCTGACTCCAGCCTGTTAGTTGCTGA
TGAATCGCGTATGCTTCATCTGGTTGTTCTTTGCAAAAGTAA-TTTTTACGCTGTATAAGCCTCGAGATATCTTGTTATA
CCACGGTTTGCCGTATCAAAGATCCTGAGTTTTCAGCATCCTTGTGTCCCGAAGGAAAAGTTGTTCATGTTTCTGTGTAT
ATGAAGTCTTGGCCTTCTCTACCTTTATGGGTCT----------------------------------------------
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--------------------------------CAAACTTACTAAAAGAGTCTTAACCAGAGTCTCAAACTAATTGTCCAA
CACGAAAGTCTTAAACTAAAAGGCGCAAAGATAACACCCGAAGGGTCCATGGCAAATGCCTCTTCATGCTCCTTGCACTT
GGCCACCAACTCAACCCCGTCGTCGTTGAAGACGATCACTAGCAAGGTGTCGGGACTCGGCATCTTGAAAGGTGAGGAGG
TACCCGATCTTGCTATGGTGAGAAACCGTGAAGGGAGCTCAACCTTTATCAAGGGTGAGCCTGTTGTTAATCGTCCGGAC
CGTGATCCTCTAGACGCAGTTGGTGCTTGTCCTCGGCACGAATTCTGGTGGGACAATGGTCAAGTGCTTGGTGAAGTCAC
GGGGCGGCAGCCACTCCAACTGGGG
>chr3B_863
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------------------------------------------------------------------------TAAATGGG
CTGGCCCAGTGGCTAGCTACTGCTGGGTGTATGGGATTGT---GCAATCTGCCGCACAGAGCGGCAAATAGGAAG-GCCT
TGTTTTTCCTAGTGTACAATACCCACCGCCTCTTCCCGTCGCCAAACCGTCCCGATCCCCGAGTTAAA-CAGGACGCGCC
TCGATTCCCGGCACACGAGCCGGCGAGCCGCGCAGCCTTCGACTCCGAGGGGAACCGCTCACCGGAGCACCACCGACCCG
CGGACATGGCCGAGGAGGGGAAGCACCTGGAGACGGGCCGGGCCGACCGCTCCGTCTGGCTCATGAAGTGCCCGACCATC
GTCTCGCGCGCCTGGCAGGAGGCC---------------GCCGCCGATGCCGGAGGCCCCAACCCTAACCCTAACCCCGT
CGTCGCCAAGGTCATCCTCTCCTTCGACCCGCTCAGCACGGACGAGGACCCGAACCAGGCAAGAGTCTCCCCCTTCGCTC
CCGTTTCCGTGGCTTTGCCTCCATCGAAACGTAGCCGCTAAGTTATTCCAATGTATGTTGTTTGGGGTTGTGGTGGGCGG
AAGGTGAGCTCCGAGATAAAC-CAGCTAACCCCTACTAGGATCGCATTGCCTAAACGATGATGAACTATTGGATTTTCTT
TCTGTCTTGAGCACGAACTTTTCTGTCCAGGCGCATTACTAGAATGGTGAACTATGTTTGCCTTCAGTTGCGTTACTGTA
TGCTTTAATTGATGTTAGTTTTTCAGATATGTAAGGCCTGTCTCTAGTCCGTATGTTTCACCTCGAAGTGCCATGGGTAA
CTTATTTTTGCAGACTTAACTCGATCAATTTGAGCAATTATAGCACTGCACTTTGGATCTTGATATATAATGTATGTGTG
TTATTCAGAAATTTGTC----------------------------------------GTAGTTTCTGGGAGAAAAGCCTC
TGCAGTCTGGAGGCATTAAGCAACATTCTGGACTGAAACAAATCGTGAAAGGGCTTAGCGTAACTGTGTAAGCATGTATG
CTCTACAACGAGGCTTAAAAACTAACGCTATCTCTGGTGGTTAAACAGTAGTGCCTTGTACATGGCTTTTTCATTTTTCC
TTTCCAGAACTCGGTTGTCAGTTTTTATGCCTACAGTCATATAAATGCTGTTCATAT-----CTCTCTCTTTGTGCCCCA
GTTTCCCCAGAGGCCATAAGACAGCACTCTTCACTAAATTTGTATAATAACATCCATTTGAGATGTTTTTGTGATGGTAC
CTATCTTTCTTATATGGTGTTAGTGAAATAACAGTTCAAGATGGAGATGGCTCAAACTGGCAATGGCAACACACCGAAGA
ATTACTCTTTAAATATGTTCAAGGATTTTGTGCCAATGTGTGTTTTCTCTGAGTCTAACCAAGGTAATATGCTGTCTTTA
ACCTTTTTATGATATCCACATGCATTTAATTTGTTTTTCTCAG--AAAACGTTGAGACCAGTTGTTTCCGTAAGTGAGAA
ATAAAGAATGCTTGTTTTACCAACATATGCTTCTTAATGTAATAATAATATGTATTGCATTGTCTAATTTGGTTCAGAAG
CTAGTTACACCTCATGCCAATGAACCCCACCGTAGTCCTGAAATTAAGGTGTTTAATTAATTCTAGAGTCCCGAGTCCTC
AGGCCCCAATTATCTATAGTTATTGCCTTATTGGCATAATTGAGCTTTGTTTTGGGCAACGACAAGGAGCTCTAGCTATT
CATTAAGTTGAAAAAGAATTGACACAGTTTATATTATAGTCCAGGTCTGATTGT------ACATATTGTGATATTGGGTT
AGTGCTAATTTGTCGATATCATTATACTGTCAGGTTGCTCACAAATTGGGTCCTCTTGTCGAACTATTTCCTTCTATAAG
TCTGTTTAGTTTGAACTTGCTGTTCAAGCACCTTGTTAATGTTTCAGTTCTAATTAATCCACTCAATATATGGTTTGTTG
TGGGCTCTCTACATTTTAGATTTTGCAAGCAACTTCATACGTAGTCATTTCAATATACCTACCGACTCATGTCATGTGTA
TCTCAT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------CTTTTAGTATCCATTTT
TTCTGTACAGTTTCTTGGTTATGTCTTGTCACGTCGTACTGGCTTCAGATACGTTTTATGCTGTTGCCTTTGGAAGTTTT
TGTGGTAGATTCTCCTCTACCACATGTTATATGCACCCTGCTGAACCAATACAATTTACACAAGCTGTTTA---------
--------------------------------------------------------------------------------
----------------------------------------TTCGGAACAACACAGCACTATTTTTTTTTTCTGCGTCACA
TAGTTATTGTGTTCTGTTTATTTCAGGGAAGCTTGCATGCGAAGGAAAAGTCGAGCACAAATTTGACATGGAACCGCACA
AAGAAAACCTTTCAGACTATGCAAAATTATGCCGTGAGAGGACTAAAAATTCTATGATTAAAACAAGAAAAGTGCATGTG
AGAAATTTAATTTGATCTTGCCCTTTTCTGTCTCTTACATCTTCCAAGTGTTGTCACGTAAATTTACCTTTCCCCTTCAT
TTCTTTGTAGGTACTTGACAAGGAGCATGTGAACGTGCGCACAATGATTAGCATGATTGGTGGCGGGCCTCATTCTGGTC
CAAAGGTAGTCGTCCTTGCTCAAGATAGCTAAGACAACTCTCAAGATTGCTAGGGGTCTTGAGAGTAGTAATAAATGGTT
CTGAAGTTAGGATTTCCATCTTATACCTTACATGTTATGTTTTCAACAATTACCTTTTCTGGCAACAAAAGCATTCCCAG
TAAACAGATTGTTTGAATTGGTCTTCTTTTAAGAGTCTCATCACTCGTAATTTTCGTGCTTATCAGGACAAGAAGAAGCC
GGCGCCAACCAGAACTCCTGAAGTGAAAAGAACACGAAGGGATCGTGGGGATATTGAAAACATCCTATTCAAGTTATTTG
AGAGGCAGTCGAATTGGTCACTGAGGCATCTAATGCAGGAAACTGATCAACCAGAGGTATTTTGCCTGATTC----CTAG
AAGCATTTATTTACTGATAAGATGTTGATCCGTTGCTTGCTACAGTTACTGCATTCATTTGCGACCTGATGGCACCTTAT
TTATGCAGCAATTCCTGAAGGAGATAATGAACGATCTTTGCGTCTACAACAAGAGAGGACCGAATCAAGGGACGCATGAG
CTCAAGCCTGAGTACAAGAAGTCTGTTGAGGACACTAGCGCGACCTGAAGTCTATATCATCTCTTATGATATG----ACC
TGAGAGCTAGAGGCTCATATGCTCTGACAAGTTGAATGTGGGTCATCGACAGATTCCGAGTCCTGCCTGTTAATTGCTGA
TGAATCGCCTGTGCTTCATCTGGTTGTTCTTCGCAAAAGTAGCTTTTTACGCCGCATAATCCTCGAGATATCTTCTTATA
CCACGGTTTGCTGTATCAAAGATCCTGAGTTTTCAGCATC-TTGTGTCCCGAAGGTAAAGTTGTTGATGTTTCTGTGTAT
ATGAAGTCTTGGTCTTCTCTGCCTTATGGGGTGTTTGGATTGTGATCAAAGCCTACTGTACCAACTTTTTGGTCATGACC
AAAAATCCTTGTTTGGATTATACCAATCGTAATTGTTTGTGCAGCTGCG----------CATTCCATGAGCTTGCTGCAG
GCCTG-GAGTTATACAACTTACCTGCTT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
>chr3B_4829
--------------------------------------------------------------------------------
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------------------ATGCAAAAAACCGTGTTCTCCACATAATTTTTTTGCACGCATCCCCTCCAGCCTGGCTGAGT
GAAAACACAAGCATTGGTGTTTGGTTGCAAGCCTGTTCTACGCAGATGCAAAGTGTTGTTGTTTGGTTAAATACAAGACA
ATGT-ATTTGTTAACCTTTTGTTTGAGTGGTAAGGTTACCAACACACACTTATAAACACACCATAGTCATAAACAAGACA
ACTAATGATAGGCATAACATAAACTAGAGTCTTAAGCATTACTCACAT-CAGTTAAACTACTCCCTCCGATCCATATTAA
TTGTCGCCGATTTAGTACAAGAGGGGGTAACACACACTTACTCAAAGAGTCTTAACCAAAGTCTTAAACTAATTGTCCAA
CACAAAAGTCTTAAACTAACAGGCGCAAAGATAACACCTGAAGGGTCCATGGCAAATGCCTCTTCATGCACCTTGCACTT
CATCACCACCTCAACCCCGTCATAGTTGAAGGTGATCAACTTCAAGGTGTTGGGAGTCGGCAGCTT-AAAGGTGACAAGG
CACCTGATCTTGATATGGTGAGAAGCGGTGAAT-GGGTCCAACCTTTATCAAGGGCGAGCCTGTTGTTTT---TCCGAAC
CGTAATCATTTAGACGCAACTGGTGTTCGTCGTCAGCATGAATTCTGGTGGGATGGTGGTCAAGTGCTTGGTGAAGTCAC
AGG----------------------
>SNPs
--S--------------------------SSS--------------------------S-------------------S-
---S-----S-----------------------------------S----------------------------------
-----------------------------------------------------------S--------------------
-----------------------------------------------------S----------S------------S--
-------------SS------------------------------S----------------------------------
-------S---------------------------------------------------------------S--------
SSSSSSSS-----SS---------S------------------------S-----S------------------------
-----------------S-------------S--S----S----S--------------------S--SSSS--------
---------------------------S----------------------------------S-----------------
-------------S-------------S------------------------------------------------S---
-----------------------------------S---------------------S--------------------S-
SSSSS--------------------S------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
-------------------------------------------S------------------------------------
---S----------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
-------------------------------------------------------------------------S------
------------------------------------------------------------------------------S-
---------------------------------------S----------------------------------------
--------------------------------------------S----------------------S------------
----------------------------------S---------------------------------------------
--------------------------------------------------------------------------------
----------------------------SS--------------------------------------------------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
----------SS----S--------------------------SS-----------------------------------
-----S--------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------S-----------------S-----------------------
---------------------S----------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
------------S-----------------------------------------------S-S-S-----S---------
--------S---------------------------------SSS-----------------------------------
------------------------------S-----------------------------------------------S-
-------S---------------S-S------------------------------------------------------
-----------------------------S-----------------S--------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S---------------------------
---------------------------------S----------------------------------------------
--------------------------S----------------------------------------S------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------SSSS----
----------------------S--------------------------------------S------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
----------------------------------------------S---------------------------------
----------------------------------------------S--S------------------------------
--------------------------------------------------------------------------------
-S-------------------------------------------------------S---------------S------
------------------S-------------------------S--S-SSSSSSSSSS----------S----------
-----S-------S----S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS--S-----S-S-S------S----S-S---S-----SS---S------S-----S------S
-S-----S--------S---------------S------S-----------------------------S----------
----S--S--S---S--S-----S-------S------SSSS--------------------------------------
------S-S---------------S----------S-SS--------SS-----------------------S-------
----S-SS-----------------S------------------------------------------------------
--------------------------------------------------------------------------------
----------------S-S-----S-------------------------------------------------------
---------------------------------------S-------------------S--------S-----------
-S--------S---------------------------------S---------------------------S-------
----------S----------S---
>forward_318
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------TGTATCTCGCAGTGTACCAGG--
--------------------------------------------------------------------------------
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-------------------------
>reverse_1645
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------GGTTGCCTTCAGCTGCGTTA----------------
--------------------------------------------------------------------------------
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-------------------------
>forward_1109
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------TCCCGATCCCCGAGTTAAAG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>reverse_2697
--------------------------------------------------------------------------------
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--------------------------------------------------------AAACGACCAGGAGCTCTAGC----
--------------------------------------------------------------------------------
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-------------------------
>forward_1434
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------CAGGCAAGAGTCTCCCCCA------
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-------------------------
>reverse_3199
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GT
GCCTGTTGGATGTTTCCC--------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------
>forward_3085
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-------------------------AAGCATCACACGAAGCTCAG-----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------
>reverse_5000
--------------------------------------------------------------------------------
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---------------------------------------ACCGGATATGCATGCTGGAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------
