>input_sequence_19208
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-------------------------------------------------------------------ATGAGCTCCGCCC
CCGCCCCG---------CCGCCGCCGCCGCCGCAGCCCTCGCCCCCCGCCGACGAGGGGCGGCCGAGGGAGGCCACGGAG
GTGGACGACCGGGTGGCCTCCCACGTCGACCCGTTCCTCGTGGAGGCGCTCGACAACCCCCGCCACCGCCTCATGAGTAC
GTGCATCGCAACCTTATCTCTTCCCGCAATTCCCTATCTCTGTCGTCGTCGTCATCGCGCCGCTAGGGTTCCGCCGCCCT
GCCTTTAATTCGCAAGAGGATGTGTCGTTCGCGGCGGGCTCGTGTGGATGTGCGGTGCGATTTAGGATTGGATTCGCGCT
TGGCTTCTAGGGCTTCGTTTCTTGGCGTATTGCATAGCCCCTGGCGTCGAATTGGGGGCTCGATTCTTCTCATGCTTCAG
GTAGCTCGGATATAGAGGATGTAGTTGTTGTTCTGTAATTCGGGCGAAATTTAATCGAATTCCGCCAGTATGCCAATCTC
CTAGGCTAGAACACTGGTGGCTTGCGCTTCCTTGTTGCTACCTGCTACAATGCTGATTGTGCTGATTTTGTACTCTCCAT
TAGCTAGTGAACAATACTCCTGCAGGCAGTAGTTTGCTCTGGTTGATATTGGTCAAGTATATGTGACTGTTGCTGATAAT
AATGAGCAGATGCTTGCTTATGTGATCCTAAATTTCTCTAGAGATGTCCCGTGCCTGCTACTCTAATTGTTATTTATCCT
TGGACATACTGCGTTTCCACTTTTCTCTACCTAAATGGTAATTAGAGTTGCATTAGATATTTTATTCTCAA--TTCCACA
AGTGGCTGTTATTTCGGTAGTTAATAGACTCATGGTTTGGACCAGTATTCCTGTGTCTTGATAAACCAGCTGTATCCTGT
TAGGTGTACAGACAGTGATGAGATAGCCATTATTGCACAAGTCGCTGCTGTAATTAGGAAAAGGCTTCATGGAGGGAGGA
TGGTGATTAGTGATCCTAATCTGAAATTCTCAACATCTCA---ATGAGGTCACGGGGATGAGCTTCTTTCACTTGCAGGC
TGCGGCTGACCTCTCCTTCAACTGCTGCTGTTTCACAACTATACGTGCCTCATTTCCTTTCTTTTCAGTTTATGTGGGTG
ATAGATTAGACCAAAA-----CCTAGAATATGCAATTTAGGGCCAA---------CTTTGTGCCTACCACCTTCTGCCTT
TTATTTCCAGTTTCCACTTCCTGTCCGAACTCGTCCTTAGCTGTGTGGGGTGCGCACCTTGGTCCCTCTGAGCTTTAGCA
GAAATCTGCAGTCCTGGATGGAGTGCTCTCTTGGATGCCTCACCTATGGCTCTGCACACGCACAGCTTGGGCTGTCTAAG
TTT---GCATCTCTGTCAACGCTTTATACATTAACATCAAACAAAAATT-TCTGTCAGTGCTATAGTATCATATCTCTGT
GCAACAGGTATAGAAATCTACCTGAATTTGAGTATGTGACTCGTTTTAAGTTCTTCTTCTA---ATTCGTTCAGCTCTCT
TGCATTTTATAGTGGTATTTGCAAGAATGAAATGGATTAACTTACTGCATGAATA---ACATGATAAATATCTTAACATA
GGTGCTGTAACCAGTGTAAACAATTAATTTACAGCTGAACTGTAATAGACTGTATTGAAGCTACTTGATTTTGGTTTATG
C-AGTCAATTTGCAGCTTGTAAGATTATTGCTGGTCATTACAATTTCTATCCTCTTTATTATGTATTTACTTCTACCAGT
TAAACTGTACTGTATTTTTATGTGTTCAGTTATTCTGGC-TTTTTGTATGTATATCTATGTCATTGTCTAACTCTTCTTT
AATCTCCCATTACCGTATAATCATTTTTGTTCTCCTCTACAACAGTTTTGCGGATGGAATTGGATATACAGAAATTTATG
CAGAATCATCACCTGCATGAATTTGAATTCCAGCATTTTCCAACTTCTTACCTCCGCTGTGCTGCTCATCGTGTTGCACA
ACATTATGGTTTAGAGACTACAGTAGCAGATAGCTTAGTTGATGGTTCTAATAGCAGGATAGTTGCGAGAAAAACACCTG
AAAGCAAGTATCCAGCTATTGCTTTATCAGAAGTTCCCGTTAAACAAGCAAGAAATGATATTGAGGCAGCAGAAAAGCTT
AAGTTTGTCATTTGTCAAAGGCCCAAAGCTTCCCAAAATGGTGCATATGGTGCTGGAACCAACAATGGTGCGGCTAAAAC
TGTTGAAGAGAGGATAGATGATTACAATAAGGCACGGGCACGCATTTTCAATGGTTCCATCCCTGCAGATGTCGTAGGCC
CAAGTGATTTTGGAGCTTTATCGGTTGCCAGAAACGAACCGGTGAATATTGAGCCTTCTGTTGATGAGAACAAGGGCTGC
ACGTTCAATAGCCGTTCCAGGGTTGCTGTTTTTAAGGACACTGAAAAAGATCGTAGTGATCCTGACTACGATCGTAACTA
CAAAAGGTTAGCATGTG-ACCCTATTAAATTTTGCTGCCACCATGGGGTCTTAATGTTGAGATTACAAACCATCAATGTG
TTGATGTGTTCACCTCTGCAGGTATGTTAGGCCCCCCGTGCCTGACTATGGCGTGAGCCCAGGCGCCTTCAATTTTGCCG
TGCCTCAGTTTGTGCAGTATGGTGTTGGTTATATGCAGTCTCCTAGCATGCCGAGGAACCAACCTTCTGTGTACTTTGGT
CAACCTGATTTATCGATGGGATCTTCTGGAACTGCTGTTTACCCACAGTGGCCTACCCCAGCAATTATGTACCCCCATTG
CTATGACAATCTTGGCCATGTGATTTCTCAGGTAAGCCTGTTATATGATTCTGCTGAGCTTGCATATCATTTGTTTCAGT
ATTTAACGATAATATCAAGGTTAGGTTGTCTAAGTGCGTGTTCTAATCATGCAAGGTAGCCA-TTTTGTTATGGGTTCTA
AAAAGTAGTAAACCAATATATCACATGCTTTTAGCCCTTTACATAACTTGGCTTAATCTGGCTGGTAGCACTTTGTTATG
CTCATTGCATCCAAGCAGGGTGGGAATGTTATATAACAGC----------------------------------------
--------------------------------GAGTTCTTCCTCGTCATGCCCAAGATAGTACTGGTAGTGGCCGTAGTA
GTTATGAGTTATGACCCCGTCGCAAACAAGGGGTAGCT-----AAGCTTTTCCCCTGAAGCTTGAAAGGTTCTTGAGCAA
TCTGTTAATAAATAAGAATGTTGTTGGGTGGTATCTTGTTTGCTGCTGAATCCAACCTTTCTCTCTTTTGTTCCCTCACA
ATAACAATGCTCAATTCTATACAATGTTTGATTCAAT-------------------------------------------
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-------------------------------------------------------------------TATCAAGTTTAAT
TTCGTTATATTGCTTGCCACAACAGTTGCTCACGTGATGGTCCTTTGGTGGTTTAGCTATTTGAAGTCGAAACATATCCT
CCAAACAGCAATTATGGTCTCAATTATTATGTGAAATGTTTGTTAATTGTAACAA--------ACTCCCAACTTTATTTT
CATGTCATCGTTCTGAAGGACCGGTTCTTAATGTTGCAGGTTCCGGTGTACCAGTCCTTCAACCATGGTTAG--------
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>chr1A_1_TraesCS1A01G258200
GCCCACACTGTTGACCACAATCCTCATCGATGAGCATTGGCAATTGGCGCATGCTTTCCCTAAGTTTGGAAATGTGACAA
TGCTTGATAATATTGTTCAGTTGTTGAACATGTTTTTTCTTACATGCCTACTCGTATCTTGTCATCTTGATGATACCTTG
TTGAGTTAGTTAAATGTCTTTGCTTCTATTTTACTTTGTATTGTGATGTTTCAAACCTAAATGTCACATTTGACCTTCTA
AATCCAAAGATGTACTTTGAAACTCAAGGTGCCAATCATTGGTATATGGATGTCATCACCTTCAAAATCTGAACACAAAA
TGAATTTTCGTTGCCAAAGGAAAAAAGAACTCAATTTGAAGTCAGTTAATTTTCATGGTGCATTACATCTATTTTAACGG
TTTACAAATTTATGATAGTACATGTTGTTTGTAGGGTTGGACTGTGGAAATCGAGTTTCTACTTTGAAACTCAAGATGCG
AATCACTGCCACATGAATGTCATCCTCTTAAAT-ATCCGAACACAAAATGAAAATACTCATCATCAAAGAAAAAAA-AGA
ACTCAATCTAAAACCAGATAATTTCCATGGTACACTAAATC----TTTTTTGAGGGCACATTAAATCTTTTTAAGGGTTT
-TCATGAATCGTGACAATCCGTTGTTGGTA-------GGGTTGGGCGGCGCACCGTGTGGCAGCCCCCGAACGAACGGTC
GAAATCAAC-CTCCCTCGACCACAATCCGACCCGGATCCAGCATCCAGCCGCGGAATGGGACGGGACCCACGCGGCGTTT
AGAAAAATCCGGAGGCGTGGTCGCGTCGGGAACCCGCTCCTCGCTTCTCCT----CTCGGGGCTCCGCTTCGCCTTCTCC
GCAGCGCAGCCACTTCGGGATCGGGAAGCGGGAGGGGAAGGGAGAGGCAGGCGAGT--------CGCCGTAGGCCGTACC
CGGCCGCAGCTCCCCTCTCTCCGCCCCCGCCTACCCCTGCCACCCGTCCCTACCCCCGCCACGCACGATGAGCTCCGCCC
CCGCCCCG---------CCGCCGCCGCCGCCGCAGCCCTCGCCCCCCGCCGACGAGGGGCGGCCGAGGGAGGCCACGGAG
GTGGACGACCGGGTGGCCTCCCACGTCGACCCGTTCCTCGTGGAGGCGCTCGACAACCCCCGCCACCGCCTCATGAGTAC
GTGCATCGCAACCTTATCTCTTCCCGCAATTCCCTATCTCTGTCGTCGTCGTCATCGCGCCGCTAGGGTTCCGCCGCCCT
GCCTTTAATTCGCAAGAGGATGTGTCGTTCGCGGCGGGCTCGTGTGGATGTGCGGTGCGATTTAGGATTGGATTCGCGCT
TGGCTTCTAGGGCTTCGTTTCTTGGCGTATTGCATAGCCCCTGGCGTCGAATTGGGGGCTCGATTCTTCTCATGCTTCAG
GTAGCTCGGATATAGAGGATGTAGTTGTTGTTCTGTAATTCGGGCGAAATTTAATCGAATTCCGCCAGTATGCCAATCTC
CTAGGCTAGAACACTGGTGGCTTGCGCTTCCTTGTTGCTACCTGCTACAATGCTGATTGTGCTGATTTTGTACTCTCCAT
TAGCTAGTGAACAATACTCCTGCAGGCAGTAGTTTGCTCTGGTTGATATTGGTCAAGTATATGTGACTGTTGCTGATAAT
AATGAGCAGATGCTTGCTTATGTGATCCTAAATTTCTCTAGAGATGTCCCGTGCCTGCTACTCTAATTGTTATTTATCCT
TGGACATACTGCGTTTCCACTTTTCTCTACCTAAATGGTAATTAGAGTTGCATTAGATATTTTATTCTCAA--TTCCACA
AGTGGCTGTTATTTCGGTAGTTAATAGACTCATGGTTTGGACCAGTATTCCTGTGTCTTGATAAACCAGCTGTATCCTGT
TAGGTGTACAGACAGTGATGAGATAGCCATTATTGCACAAGTCGCTGCTGTAATTAGGAAAAGGCTTCATGGAGGGAGGA
TGGTGATTAGTGATCCTAATCTGAAATTCTCAACATCTCA---ATGAGGTCACGGGGATGAGCTTCTTTCACTTGCAGGC
TGCGGCTGACCTCTCCTTCAACTGCTGCTGTTTCACAACTATACGTGCCTCATTTCCTTTCTTTTCAGTTTATGTGGGTG
ATAGATTAGACCAAAA-----CCTAGAATATGCAATTTAGGGCCAA---------CTTTGTGCCTACCACCTTCTGCCTT
TTATTTCCAGTTTCCACTTCCTGTCCGAACTCGTCCTTAGCTGTGTGGGGTGCGCACCTTGGTCCCTCTGAGCTTTAGCA
GAAATCTGCAGTCCTGGATGGAGTGCTCTCTTGGATGCCTCACCTATGGCTCTGCACACGCACAGCTTGGGCTGTCTAAG
TTT---GCATCTCTGTCAACGCTTTATACATTAACATCAAACAAAAATT-TCTGTCAGTGCTATAGTATCATATCTCTGT
GCAACAGGTATAGAAATCTACCTGAATTTGAGTATGTGACTCGTTTTAAGTTCTTCTTCTA---ATTCGTTCAGCTCTCT
TGCATTTTATAGTGGTATTTGCAAGAATGAAATGGATTAACTTACTGCATGAATA---ACATGATAAATATCTTAACATA
GGTGCTGTAACCAGTGTAAACAATTAATTTACAGCTGAACTGTAATAGACTGTATTGAAGCTACTTGATTTTGGTTTATG
C-AGTCAATTTGCAGCTTGTAAGATTATTGCTGGTCATTACAATTTCTATCCTCTTTATTATGTATTTACTTCTACCAGT
TAAACTGTACTGTATTTTTATGTGTTCAGTTATTCTGGC-TTTTTGTATGTATATCTATGTCATTGTCTAACTCTTCTTT
AATCTCCCATTACCGTATAATCATTTTTGTTCTCCTCTACAACAGTTTTGCGGATGGAATTGGATATACAGAAATTTATG
CAGAATCATCACCTGCATGAATTTGAATTCCAGCATTTTCCAACTTCTTACCTCCGCTGTGCTGCTCATCGTGTTGCACA
ACATTATGGTTTAGAGACTACAGTAGCAGATAGCTTAGTTGATGGTTCTAATAGCAGGATAGTTGCGAGAAAAACACCTG
AAAGCAAGTATCCAGCTATTGCTTTATCAGAAGTTCCCGTTAAACAAGCAAGAAATGATATTGAGGCAGCAGAAAAGCTT
AAGTTTGTCATTTGTCAAAGGCCCAAAGCTTCCCAAAATGGTGCATATGGTGCTGGAACCAACAATGGTGCGGCTAAAAC
TGTTGAAGAGAGGATAGATGATTACAATAAGGCACGGGCACGCATTTTCAATGGTTCCATCCCTGCAGATGTCGTAGGCC
CAAGTGATTTTGGAGCTTTATCGGTTGCCAGAAACGAACCGGTGAATATTGAGCCTTCTGTTGATGAGAACAAGGGCTGC
ACGTTCAATAGCCGTTCCAGGGTTGCTGTTTTTAAGGACACTGAAAAAGATCGTAGTGATCCTGACTACGATCGTAACTA
CAAAAGGTTAGCATGTG-ACCCTATTAAATTTTGCTGCCACCATGGGGTCTTAATGTTGAGATTACAAACCATCAATGTG
TTGATGTGTTCACCTCTGCAGGTATGTTAGGCCCCCCGTGCCTGACTATGGCGTGAGCCCAGGCGCCTTCAATTTTGCCG
TGCCTCAGTTTGTGCAGTATGGTGTTGGTTATATGCAGTCTCCTAGCATGCCGAGGAACCAACCTTCTGTGTACTTTGGT
CAACCTGATTTATCGATGGGATCTTCTGGAACTGCTGTTTACCCACAGTGGCCTACCCCAGCAATTATGTACCCCCATTG
CTATGACAATCTTGGCCATGTGATTTCTCAGGTAAGCCTGTTATATGATTCTGCTGAGCTTGCATATCATTTGTTTCAGT
ATTTAACGATAATATCAAGGTTAGGTTGTCTAAGTGCGTGTTCTAATCATGCAAGGTAGCCA-TTTTGTTATGGGTTCTA
AAAAGTAGTAAACCAATATATCACATGCTTTTAGCCCTTTACATAACTTGGCTTAATCTGGCTGGTAGCACTTTGTTATG
CTCATTGCATCCAAGCAGGGTGGGAATGTTATATAACAGC----------------------------------------
--------------------------------GAGTTCTTCCTCGTCATGCCCAAGATAGTACTGGTAGTGGCCGTAGTA
GTTATGAGTTATGACCCCGTCGCAAACAAGGGGTAGCT-----AAGCTTTTCCCCTGAAGCTTGAAAGGTTCTTGAGCAA
TCTGTTAATAAATAAGAATGTTGTTGGGTGGTATCTTGTTTGCTGCTGAATCCAACCTTTCTCTCTTTTGTTCCCTCACA
ATAACAATGCTCAATTCTATACAATGTTTGATTCAAT-------------------------------------------
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-------------------------------------------------------------------TATCAAGTTTAAT
TTCGTTATATTGCTTGCCACAACAGTTGCTCACGTGATGGTCCTTTGGTGGTTTAGCTATTTGAAGTCGAAACATATCCT
CCAAACAGCAATTATGGTCTCAATTATTATGTGAAATGTTTGTTAATTGTAACAA--------ACTCCCAACTTTATTTT
CATGTCATCGTTCTGAAGGACCGGTTCTTAATGTTGCAGGTTCCGGTGTACCAGTCCTTCAACCATGGTTAGGAGATGC-
-TACTTCATGGGATGTTGGAACAAAATTATTTAAAACCTGCTATGTCGTGTTGTCTTGTTAAGTGCGTC----TATTTTG
GAGTCAGTTTTTCCCATCATCGAACTTCTGGATGGTGTCAGCTAGGTGTATAAGAATTCTTATTATTGTTATTGTGCACT
AATCTACAAACAGGGGCGCTTGTCTTTTGCTCGTTTACTTCTGTATTTGGTTAAGCACTCGTTTACTCTATTTGATATTC
CTGTA-CATCACTCCCTGCCTCGTACTGGTCTCTGAGGGCGCGTACAACAATCCACCGTGAGTA----------------
-------GACCG-GTATCTTAGCATTCGGGGTGCCACAATGTACATACAAAATCAGT-----------------------
--------AAATTTAAACTACAAACAGTATAATTTTGTCGAAACACAGATCATAATTTCCACTGGAGC------------
-ATCAAGTAATCAAGTTACTAGGATTTGTGATTAGCTCGAGAGAGAAAGAAGAAAGAGTAGTCTGCTGGTAATCTGGTTG
GTCCAAAGAACGATAGTCAGCTTCTTAAGTCTGTTCTTTTATTAGTACCTCAGCGGTCGGTTGTTAACTGACTTG-TTGT
AGGTTCGAGTCCTACACATGACAACAAACTC------------------CTGTAATATGCTGCCTGCTCTTCAAAACCAA
ACTTAGCTTGGAGAAGGACACAATTACAATTGT----AAGCAAATTTACAACATCTACGACCGGTTGTCTCAAACCAGTC
TCAAGCGCTCGGGCCGACTAGCACCCCTCATATCCGGCACCATTCTAGGATGGATATGAGGTGGCCCGGGATGCGTCGCG
TCCGCCACGTTGGACTATCG---------------------------GATCTCATACGAAATCGCTCGGAAACCCAACGA
CCCAACAATCCGATGAGCGTCTGGGCTATTTAAGTCGGACATCGACCCCCAACACTAGCCACATCCACTTCTCTCGCTCT
CCGCGCCGCCAACTTGATCCGCTCTCTGCTC------------GATCTTTGCTACAACCATGGCCCGACAGAGGGTGACC
ACCTACCTA-
>chr1D_1
GCCCACATTGGTGACCACAATCCTCATAGATGAGCATTGGAAATTGGCACATGCTTTCCCTAGGTTTGAAAACGTGACAA
CATTTCATAATATTGTTCAGTTGTTGAACATGTTTTT-CTTACATGCCTACTCGTATCTTGTAATCTTGATGATACCTTG
TTGAGTTAGTTAAATGTCTTTGATTCTATTTGCTTTTGTATTCTGATGTTTCAAACCTAAATGCCACATTTGACCTTCTG
AATCCAAAGTTGTCCTTTGAAACTCAAGGTGGCAATCATTGGTATATGGATGTCATCACCTTAAAAATCCGAACACAAAA
TGAATACTCGTTTTCAAAGGAAAAAAGAACTTAATTTGAAGTTAGTTTATTTTCATGGTGCATTACATGTCTTTTAGCTA
TTTACAAATTTATGATAGTCTGT-T-GTCTGTAGGGTCGGACTGTGGACATCGAGTTTCTACTTTGAAACTCAAGGTGCG
AATCACTACCGTATGAAAGTCGTCATCTTAAAAAATCTGAACACAAAATGAAAATACTCATCATCAAAGAAAAA-A-AGA
ACTCAATCTAAGACCAGATAATTTCCATGGTACATTATATCTTCTTTTTTTGAGGGCACATTAAATCTT-----------
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>chr1B_1
GCCCACATTGGCGACTACAATACTCATCGATGAGCATTGGCAATTGGCACATGCTTTCCCTAAGTTTGGACACGTGACAA
TGTTTGATAATATTGTTCAGTTGTTGAACATGTTTTT-CTTACATGCCTACTTGTATCTTGTAATCTGGATGATACCTTG
CTGAGTTAGTTAAACGTCTTTGATTCTATTTTACTTTGTATTGTGATGTTTCAAACCTAAATGCCACATTTGACCTTCTG
AATCCAAAGGTGTACTTTGAAACTCAAGATGGCAATCATTGGTATATGGATGTCACCACCTTAAAAATCTAG-CACAAAA
TGAATACTCGTCGTCAAAGAAAAAAAGAACTCAATTTGAAGTTAGTTAATTTTCATGGTGCATTGCATCTCTTTTATCGG
TTTACAAATTTATGGCAGTCTGT-TTGTTTGTAGGGTTGGATTGTGGACATCGAGTTTCTACTTTG------------CG
AATCACTACCACATGAATGCCATCCTCTTAAAAA-TCTGAACACAAAACGAAAATACTCATCATCAAAGAAAAA-AAAGA
ACTCAATCTAAAACCAGATAATTTCCATGGTACGTTA--------------------------AATCTTTTTAACGGCTC
ATCATGAATCGTGACAATCCGTTGTTTGTACTTTGTAGGGCTGGGCGGCGCACCGTGTGGCAGCCCCTGAACGAACGGTC
GAAATCAAACCTTCCTCGACCACAATCCGACCCGGATCCAGCATCCAGCCGCGGAATGGGACGGGACCCACGCGGCGTTT
AGAAAAATCCGGAGCCGTGGTCGCGTCGGGAACCCGCTCCTCGCTTCTCCT----CTCGGGGCTCCGCTTCGCCTTCTCC
GCAGCGCAGCCACTTCGGGATCGGGAAGCGGGAGGGGAAGAGAGAGGCAGGCAGGCAGGCGAGCC-------GCCGTACC
CGGCCGCAGCTTCCCTCTCTCCGCCCCCGCCTACCCCTACC-----CCCCTCCCCCCGCCGCGCACGATGAGCTCCCCCC
CCGCCTCTGCCCCCGCCCCGCCGCCGCCGCCGCCGTCCTCGCCCCCCTCCGACGAGGGGCGGCCGAGGGAGGCGACGGAG
GTGGACGACCGGGTGGCCTCCCACGTCGACCCGTTCCTCGTGGAGGCGCTCGACAACCCCCGCCACCGCCTCATGAGTAC
GTGCATCGCAACCTTATCTCTTTCCGCAATTCCCTGTCTCT---GTCGTCGTCGTCGCGCCGCTAGGGTTCCGCCGTCCC
GCCTTTAATTCGCGAGAGGATGCGTCGTTAGCGGCGGGCTCCTGTGGATGTGCGGTGCGATTTAGGATTGGATTCGTGCC
TGGCGTCTAGGGCTTCGTTTCCTGGTGTATTGCATAGCCCCTGGTGTTGAATTGGGGACTCGATTCTTCTCATGCTTCAG
CTAGCTCGGATATAGAGGATGTGGTTGATGTTCTGTAATTCGGGCGAAATTTAATCGAATTCTGCCAGTATGCCAATCTC
CTAGGCTAGAAGAGTGGTGGCTTGCGCTTCCTTGTTGCTACATGCTACAATGCTGATTGTGCTGATGCTGTACTCTCCAT
GAGCTAGAGAACGATACTGATGCAGGCATTAGTTTTCTCTGGTTGATATTGGTCAAGTATATGTGACTGTTGCTGATAAT
AATGAGCAGATGCATGCTTATGTGATCCTAAACTTCTCTGGAGATGTCCCGTGCCTGCTACTC-AATTGCTATTTATCCT
TGGACATACTGTGTTTGCACTTTTCTCTACCTAAATGGTAATTAGAGTTGCATTAGATGTTTTATTCTCAA--TTCCGCA
AGTGGCTGTTATTTCGGTTGTT-ATAGACTCATGGTTTGGACCAGTATTCCTGTGTCTTGATAAACCAGCTGTATCCCGT
TAGGTGCACTGACAATGATGAGATAGCCATTATTGCTCAAGTCGCTGCTGTAATTAGGAAAAGGCTCCAGGGAGGGGGGC
-GGTGAATAGTGATCTTAATCTGAAATTCTCAACATCTCATCAATGAGGTCACGGGGATGAGCTTCTTTCACTTGCAGGC
TGCAGCTGAGCTCTCTTTCAACTGCCGCTGTTTCACAACTATACGTGCCTCATTTCCTTTCTTTTCA-TTTATGTGGATT
GTAGATTAAAACAAAA-----CCT--AATATGCAATTTAGGTCCAATCCAGCTCTCTTTATGTCTAACACCTTCCGCCTT
TGG--------TTCCACTTCCTGTC-GAACTCGTCCTTTGCTGTGAGGGTTGCGCACCTTGGTGCCAACAAGCTTTAGCA
GAAATCTGCTGTCCTGGATGGAATTCTCTCCTGGATGCCTCACCTATGGCTCTGTACATGCACAGCTTGGGGTGGTGTCT
AAATTAGCATCTCTGTCAATGCTTTATACATTAACATCAAACAAAAAAAGTCTGTTAGTGCTATAGTATCATCTCTCTGT
GCACCAGGTATAGAAATCTACCTGAATTTGAGTATGCGACTCGTTTTAAG---TTTGTTTTCCGATTCGTTCAGTTCTCT
TACATTCTCTAATGGTATTTGCAACAACGAAATGGATTAACTCACTGCATGAATTCTCACACGAGAAATATCTTAACATA
GGTGCTGTAACCAGTGTAAATAATTGATTTACAGTT--------------------------------------------
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-------TACTGTATTTTTATGTGTTCAGTTATTCGTGCTTTTTTGTATATTTATTTATGTCATTGTCTAACTCTTCTTT
AACCTTCAATTACCATATAATCATTTTTGTT---CTCTACAACAGTTTTGCGGATGGAATTGGATATACAGAAATTTATG
CAGAATCATCACCTGCATGAATTTGAATTCCAGCATTTTCCAACTTCTTACCTCCGCTGTGCTGCTCATCGTGTTGCACA
ACATTATGGTTTAGAGACTACAGTAGCTGATAGCCTAGTAGATGGTTCTAATAGCAGGATAGTTGCAAGAAAAACACCTG
AAAGCAAATATCCAGCTATTGCTTTATCAGAAGTTCCCGTTAAACAAGCAAGAAATGATATTGAGGCAGCAGAAAAGCTT
AAGTTTGTCATTTGTCAAAGGCCCAAAGCTTCCCAAAATGGTGCATATGGTGCTGGAACCAATAATGGTGCGGCGAAAAC
TGTTGAAGAGAGGATAGATGATTACAATAAGGCACGAGCACGCATTTTCAATGGTTCCATTCCTGCAGATGTTGTAGGCC
CAAGTGATTTTGGAGCTTTGTCCATTGCCAGAAACGAACCGGTGAATGTTGAGCCTTCTGTTGATGAGAACAAGGGCTGC
ACGTTCAATAGCCGTTCCAGGGTTGCTGTTTTTAAGGACACTGAAAAAGACCGTAGTGATCCAGACTACGATCGTAACTA
CAAAAGGTTAGCATGTG-ACC-TATTAAATTTTGCTGCCACCATGGGGTCTTAATGTTGAGATTACAAACCATAAATATT
--------TTCACCTCTGCAGGTATCTTAGGCCCCCTGTGCCTGACTATGGTGTGAGCCCAGGCGCCTTCAATTTTGCCG
TGCCTCAGTTTGTGCAGTATGGTGTTGGTTATATGCAGTCTCCTAGCATGCCGAGAAACCAACCTTCTGTGTACTTTGGT
CAACCTGATTTATCGATGGGATCTTCTGGAACTGCTGTCTATCCACAGTGGCCTACCCCAGCAATGATGTACCCCCATTG
CTATGACAACCTTGGCCATGTGATTTCTCAGGTAAGCCTGTTATATGATTCTGCTGAGCTTGCATATCATTTGTTTCAGT
ATTCAAGGATAATATCAAGGTTAAATTGTCTAAGTACGTGTTCTAATCATGGAAGGTAGCGAATATTGTTATGTTTTCTA
AAAAGTAGTAA-CCAATATATCACATGCTGTTAGCCCTTTACAGAACTTGGCTTAATCTGTATGGTAGCAGTTTGTTATC
CTAATTGCATCCAAGCTGGGTGGCAATCCCTCCGTATCAAAATATAAGACGTTTTTGTAGGCTAGTTTAGACTACAAAAA
CGTCTATATTTTGGTACATAGCTAGTAAAAGTGAGTCCTTCCTCGTCATGCCCAAGATAGTACTGGTAGTGGCAGTTGTA
GTTATGAGTCATGACCCCGTCGTGAACAAGGG-TAGCTTGATATAGC-TTTGCCTTGACGCTTGAAAGGTTCTCAAGCAA
TCTGTTAAGAAATAAGAATGTTGTTTGTTGGTATCTTGTTTGCTGCTGGATCCAACCTTTCTCTCTTTTGTTCCCTCACA
ATAAT-ATGCTCTATTCTACTCCCTCTGTAAACTACTCCCTCCGTCCCAAAATTCTCGTCTTCGATTTGTCTAGATACGG
ATGTATCTAATACTAAAACGTGACTTGATACATCCGTATTTAAACAAATCTAAGACAAGAATTTTGGGACGGAGGGAGTA
ATATAAGAGCGTTTAGATCACTGAAGTAGTGATTTAAACGCTCTTATATTAGTTTACGGAGGGAGTATATAATGTTTGAT
TTCGGTATATTGCTTGCCACAACAGTTACTCACGTGATGGTCCTTTGGTTGTTTGGTTGGTTGAATTCGAAACGTATCTG
CCAAACAGCAATGCTGGTCTCATTTACTGCGTGAAATGTTTGTTGGTTCTCTAACAAACAAACACT-CCAACTTTATTTT
CATGTCATGTTCTC---------------AATGTTGCAGGTTCCGGTGTACCAGTCCTTCAACCATGGCTAGGAGATGC-
-TACTTCCTGGGATGTTGGAACAGAATTTGTTAAAACCTGCTATGTCGTGTTGTCATGTTAAGTGCGTCTATCTATTTTG
GAGTCAGTTTTTCCCATCATCGAACTTCTGGATAGTGTCAGCTAGGTGTATAAGAATTCTTATT---GTTATTGTGCACT
AATCTACAAACAGGGGCGCTCGTCTTTTGCTCGTTTACTTATGTATTTGGCCAAGCACTC--TTACTCTATTCGACATTC
ATGAAACATCACTCCCTGCCTTGCACTGGTCCCTGAGGGCGCGTACAACAATCCACCGTGAGCTGTCCATAGTTGGTGCC
AGTGGTGGACCTAGTATCTTAGCATTTGGGGTGCCACAATGTGCATACATAGGCAACACAACTTCAGTGCACCTGTCCAA
AATTGGTGAATTTTACACTACAAACAGTATAATTTTGTTGAAACAC-GATCATAATTCCCACTGGAACCTCCAAAAATAG
GATCAAGTAATCAATTTACTAGGATTTGTGATGAGCTGGAGAGAGAACAAAGAGAGAGTAGCCTGCTGGTA---------
-------------------GCTTCTTAAGTCTGTTCTTTTGTTAGTCGCTCAGCGGTCGGCGGTTCTTTAACTGACTTGT
AGGTTCGAGTCGTACACATGACAACAAACTCCAAACTCTTGGCCAGAATCTGTAATATGCTGCCTGCTCTTCAAAAGCAA
ACTTAGCTTGGAGAAGGACACAGTTACAATTGTCCAAAAGCAAACTTACAACATCTACGGTCGGACGTCTCAAACCGGTC
TCAAATGTCTGGACTGACTAGCACCCCTCATATCCGGCCCCATTCCGGAACAGATATGAGGCGGCCCGGGGCGCGTCCGT
AACGTCGGACTGATGCTCGGGTCTCATACGAAGTCGGACTGATGCTCGGTCTCATACGAAATCGCTCGGAAACCCAATGA
CCC--------GATGAGGGTCTGGGCTATTTAAGCCGGACATTGACCCCCAACACTAGGCACATCCACTTCTCTCGCTCT
CCGCGCTGCCAACCCGATCCGCTCTCTGCCTTCCTCTCTGCTTGATCTTTGCGATAGCCATGGCCCGACAGAGGGTCACC
ACCTAC----
>chr1D_616
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-------------------------------------------------------------TAAATCTTTTTAAGGGTTT
-TCATGAATCGTGACAATCCGTTGTTG-------GTAGGGTTGGGCGGCGCACCGTGTGGCACCTCCTGAACGAACGGTC
GAAATCAAG-CTTCCTCGACCACAATCCGACCCGGATCCAGCATCCAGCCGCGGAATGGGACGGGACCCACGCGGCGTTT
AGAAAAATCCGGAGCCGTGGTCGCGTCGGGAACCCGCTCCTCGCTTCTCCTCTCCCTCGGGGCTCCGCTTCGCCTTCTCC
GCAGCGCAGCCACTTCGGGATCGGGAAGCGGGAGGGGAAGGGAGAGGCAGGCGAGT--------C-------GCCGTACC
CGGCCGCAGCTCCCCTCTCTCCGCCCCCGCCTACCCCTGCCACCCACCCCTACCCCCGCCGCGCACGATGAGCTCCGCCC
CCGCCCCG---------CCGCCGCCGCCGCCGCCGTCCTCGCCCCCCGCCGACGAGGGGCGGCCGAGGGAGGCGACGGAG
GTGGACGACCGGGTGGCCTCCCACGTCGACCCGTTCCTCGTGGAGGCGCTCGACAACCCCCGCCACCGCCTCATGAGTAC
GTGCATCGCAACCTTATCTCTTCCCGCAATTCCCTATCCCTGTCGTCGTCGTCGTCGCGCCGATAGGGTTCCGCCGCCCT
GCCTTCAATTCGCGAGAGGACGTGTCGCTCGCGGCGGGCTCGTGTGGATGCGCGGTGCGATTTAGGATTGGATTCGTGCC
TGGCTTCTAGGGCTTCGTTCCCTGGTGTATCGCATAGCCCCTGGTGTCGAATTGGGGACTGGATTCTTCTCATGCCTCAG
GTAGCTC---------GGATGTAGTTGTTGCTCTGTAATTCGGGCGAAATTTAATAGAATTCTGCCAGTATGCCAATCTC
CTGGGCTAGAACAGTGCTGGCTTGCGCTTCCTTGTTGCTACATGCTACAATGCTGATTGTGCTGATTTTGTACTC--CAT
TAGCTAGAGAACAATACTCCTGCAGGCTGTAGTTTGCTCTGGTTGATATTGGTCAAGTGTATGCGACTGTTGCTGATAAT
AATGAGCAGATGCATGCTTATGTGATCCTATACTTCTCTAGAGATGTCCCGTGCCTGCTACTC-AATTGCTATTTATCCT
TGGACATACTGCGTTTCCACTTTTCTCTACCTAAATGGCAATTAGAGTTGCATTAGATATTTTATTCTCAAAATTCCACA
AGTGGCTGTTATTTCGGCAGTT-ATAGACTCATGGTTTGGACCAGCATTCCTGTGTCTTGATAAACCAGCTGTATCCTGT
TAGGTGTACAGACAGTGATGAGATGGCCATTATTGCACAATTTGCTGCTGTAATTAGGGAAAGGCTTCATCGAGGGAGGA
TGGTGATTAATGATCTTAATCTGAAATTCTCAACATCTCA---ATGAGGTCACGGGGATGAGCTTCTTTCACTTGCAGGC
TGCAGCTGACCTCTCCTTCAACTGCCGCTGTTTCACAACTATATGTGCTTCATTTCCTTTCTTTTCAATTTATGTGGGTG
ATAGATTAGACAAAAAAAAACCCTAGAATATGCAATTTAGGGCCAATTCAGCTCTCTTTATGCCTAGCACCTTCTGCCTT
TTATTTCCAGTTTCCACTTCCTGTCCGAACTCGTCCTTAGCTGTGTGGGGTGCGCACCTTAGTGCCTCTGAGCTTTAGCA
GAAATCTGCTGTCCTGGATGGAGTGCTCTCCTGGATGCCTCACCTATGGCTCTGCACACGCACAGCTTGGGGTGTCTAAG
TTT---GCATCTCTGTCAATGCTTTATACATTAACATCAATTTTTTT-----TGTCAGTGCTATAGTATCATATCTCTGT
GCAACAGGTGTAGAAATCTGCCTGAATTTGAGAATTTGACTCGTTTTAAG---TTCTCCCA---ATTCGTTCAGTTCTCT
TGCATTCTCTAGTGGTACTTGCAAGAACGAAATGATCG-ACTCACTGCGTGAATTCTCACATGAGAAATATCTTAACATA
GGTGCTGTAACCAGTGTAAATAATTAATTTACAGTTAAACTGTAATAGACTGTATTGAAGCTACCTGATTTTGGTTTTAT
GGAGTCAATTTGCAGCTTGTAACATTATTGCTTGTCATTACAATTTCTATCCACTTTATTATGTATTTATTTCTACCAGT
TAAGCTGTACTGTATTTTTATATGTTCAGTTATTCTGGCTTTTT-GTATATATATTTACGTCATTGTCTAACTCTTCTTT
AATCTTC--------------------------------CAACAGTTTTGCGTATGGAATTGGATATACAGAAATTTATG
CAGAATCATCACCTGCATGAATTTGAATTCCAGCATTTTCCAACTTCTTACCTCCGCTGTGCTGCTCATCGTGTTGCACA
ACATTATGGTTTAGAGACTACAGTAGCAGATAGCTTAGTTGATGGTTCTAATAGCAGGATAGTTGCGAGAAAAACACCTG
AAAGCAAATATCCAGCTATTGCTTTATCAGAAGTTCCCGTTAAACAAGCAAGAAATGATATTGAGGCAGCAGAAAAGCTT
AAGTTTGTCATTTGTCAAAGGCCTAAAGCTTCCCAAAATGGTGCATATGGTGCTGGAACCAACAATGGTGCGGCTAAAAC
TGTTGAAGAGAGGATAGATGATTACAATAAGGCACGGGCACGCATTTTCAATGGTTCCATTCCTGCAGATGTTGTAGGCC
CAAGTGATTTAGGAGGTTTGTCGATTGCCAGAAACGAACCGGTGAATGTTGAGCCTTCTGTTGATGAGAACAAGGGTTGC
ACATTCAATAGCCGTTCCAGGGTTGCTGTTTTTAAGGACACTGAAAAAGATCGTAGTGATCCTGACTACGATCGTAATTA
CAAAAGGTTAGTATGTGCACC-TATTAAATTTTGCTGCCACCATGGGGTCTTAATGTTGAGATTACAAACCATCAATGTG
TTGATGTGTTCACCTCTGCAGGTATGTTAGGCCCCCCGTGCCTGACTATGGTGTGAGCCCAGGCGCCTTCAATTTTGCCG
TGCCTCAGTTTGTGCAGTATGGTGTTGGTTATATGCAGTCTCCTAGCATGCCGAGAAACCAACCTTCTGTGTACTTTGGT
CAACCTGATTTATCGATGGGATCTTCTGGAACTGCTGTTTACCCACAGTGGCCTACCCCAGCAATGATGTACCCCCATTG
CTATGACAATCTTGGCCATGTGATTTCTCAGGTAAGCCTGTTATATGATTCTGCTGAGCTTGCATATCATTTGTTTCAGT
ATTTAAGGATAATATCAAGGTTAAGTTGTCTAAGTGCGTGTTCTAATCATGCAAGGTAGCCAATTTTGTTATGGGTTCTA
AAAAGTAGTAAACCAACATATCACATGCTTTTAGCCCTTTACAGAACTTGGCTTAATCTGGCTGGTAGCACTTTGTTATG
CTCATTGCATCCAAGCAGGGTGGGAATGTTATATAACAGC----------------------------------------
--------------------------------GAGTTCTTCCTCGTCATGCCCAAGATAGTACTGGTAGTGGCAGTAGTT
GTTATGAGTTATGACCCTGTCGCAAACAAGGGGTAGCTTGATAAAGCTTTTCCCCTGAAGCTTGAAAGGTTCTTAAGCAA
TCTGTTAATAAATAAGAATGTTGTTTGGTGGTATCTTGTTTGCTGCTGACTCCAACCTTTCTCTCTTCTGTTCCATCACA
ATAACAATGCTCTATTTTATACAATGTTTGATTCAAT-------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TATCATGTTTAAT
TTCGTTATATTGCTTGCCACAACAGTTGCTCATGTGATGGTCCTTTGGTTGTTTGGCTAGTTGAATTCGAAACATATCCT
CCAAACAGCAATTATGGTCTCAATTATTATGTGA-ATGTTTGTTGATTCTAACAA--------ACT-CCAACTTTATTTT
CATGTCATCGTTCTGAAGGACCGGTTCTTAATGTTGCAGGTTCCGGTGTACCAGTCCTTCAACCATGGTTAGGAGATGCT
ATACTTCATGGGATGTTGGAACAAAATTATTTAAAACCTGCTATGTCGTGTTGTCTTGTTAAGTGCG----TCTATTTTG
GAGTCAGTTTTTCCCATCATCGAACTTCTGGATAGTGTCAGCTAGGTGTATAAGAATTCTTATTATTGTTATTGTGCACT
AATCTACAAGCAGGGGCGCTTGTCTTTTGCTCGTTTACTTCTGTATTTGGTTAAGCACTCGTTTACTCTATTCGATATTC
CTGAA-CATCACTCCCTACCTCGTACTGGTCTCTGAGGGCGCGTACAACAATCCACCGTGAGTA----------------
-------GACCTAGTATCTTAGCATTCGGGGTGCCACAATCTACATA------------------------------CAA
AATCGGTAAATTTTACACTACAAACAGTATAATTTTGTCGAAACAC-GATCATAATTTCCACTGGAGC------------
-ATGAAGTAATCAAGTTACTAGGATTTGTGATGAGCTGGAGAGAGAAAAAAGAAAGAGTAGTCTGCTGGTAAACTGGTTG
GTTCAAAGAACGATAGCCAGCTTCTTAAGTCTGTTCTTTTATTAGTAGCTCAGCGGTCGGTTGTTAACTGACTTG-TTGT
AGGTTCGTGTCGTACACATGACAACAAACTCC------------------TGTAGTATGCTGCCTGCTCTTCAAAACCAA
ACTTAGCTTGGCGAAGGACACAATTACAATTGTCCAAAAGCAAAATTACAACATCTACGGCCGGGCGCCTCAAACCGGTC
TCAAACGCCCGGACTGACTAGCATCCCTCATATCCGGCACCATTTTAGGACGGATATGAGGCGGCCCGGGATGCGTCTGC
CACGTCGGATTGATGTTT-G---------------------------GGTCTCATACGAAATCGCTCGGAAACCCAACAA
TCCA--------ATGAGCGTCTGGGCTATTTAAGCCGGACATCGACCCCCAGCACTAGGCACATCCACTTCTCTCGCTCT
CCGCGCCGCCAACCCGATCCGCTCTCTGCTC------------GATCTTTGCGACAGCCATGGCCCGACAGAGGGTGACC
ACCTACGCTA
>SNPs
-------S--S-------------------------------------S-----------------------S-------
--S----------------------------------S------------------------S-----------------
----------------------S----------------------------------------S---------------S
---------S---------------------S------------------------------S-----------------
-----SS------S----------------------------S---------------------------S-----S---
-------------------SSS-S------------------------S--------------------------S----
-------S------------------------S----S------------------------------------S-----
----------------------------------S--S------------------------------------------
-------------------------------------------------------------------S------------
--------S---S-------------------------------------------------------------------
--------------S-----------------------------------------------------------------
-----------------------------------------------------------------SSSSSSS--------
---------------------------------------------SS-------------S-------------------
---------------------------------S-S-------------------------------------S------
--------------------------------------------------------------------------------
-----------------------------------------------------S--------------------------
-------------S--------------------------------------------------------------S--S
---------------------S---S------------------S------------S----------------------
--------------------------------------------------------------S-----------------
-------------S---------------------------S--------------------------------------
-------S------------------------------------------------------------------------
-------------S------------------S------------------------------S-----S----------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
---S---------------------S-----------------------------------------S------------
-----------------------------------------------------------S------S-------------
---------------------------------------------------------------S----------------
---------S--------------------S----------------------------------------S--------
-------------------S---------------------------SS-------------------------------
--------------------------------------------------SSS---------------------S-----
------S-S------------------S--------------S-----------S---------S---------------
--------------------S-------------S-S---------------------------S------------SSS
S---------------------S---------S-------------------S----------------S----------
---S---------------------------------------------S-----S------------------------
-----S-S------S----------------SSS----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-----------S-------
-------------------S---S-----------------------S--------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
---------------------------------------------------S----------------------------
-------------------------------------------------------S------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
------S----------------S--------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------S-----
-------------------------S------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-------------------------------------------------S----S----S-----S--------------
--------------------------------------------S---S-----------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
------------------------------------------------------------------------S-------
---S----------------------------------------------------------------------------
-----------S-------------------------------------S-SS--SS-----------------------
----------S----S------------------------------S---------------------------------
--------------------------------S----S----------S-----------------------S-------
--S-------------S------------------------------S--------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------S--------------S----SS----------S---
----S---S---S-S-----------------------------------S----------S---------------SSS
SS--S-SSS---SSS-S-S-----------------------------S-------------------------------
----SSSSSSS-----------------------S-----------------------S---------------------
-------------SS-------------------------------------S---S-----------------------
------SSS-
>forward_49
-----------------------------ATGAGCATTGGCAATTGGCG-------------------------------
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>reverse_1360
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-------------------------------------------------------------------------------T
TGGCTTCTAGGGCTTCGTT-------------------------------------------------------------
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>forward_1294
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--------------------------------------------------------------------------CGCCCT
GCCTTTAATTCGCA------------------------------------------------------------------
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>reverse_2330
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---------AGTCCTGGATGGAGTGCTCT---------------------------------------------------
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>forward_2227
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-----------------------------------------------AGGGCCAACTTTGTGCCTAC-------------
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>reverse_3380
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-------------------ATCGGTTGCCAGAAACGAAC-----------------------------------------
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>forward_2351
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-----------TCCTGGATGGAGTGCTCTCT-------------------------------------------------
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>reverse_4346
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-------------------------GGGTGGTATCTTGTTTGCTGC----------------------------------
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>forward_3826
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-----------------------------------------------GTGGCCTACCCCAGCAATT--------------
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>reverse_5851
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----------CGATGAGCGTCTGGGCTATT--------------------------------------------------
--------------------------------------------------------------------------------
----------
