>input_sequence_18849
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---------------------------------------------------------------------ATGAGTGCAAG
CAACTTTGGGGACAGCATGGAGTGGGGCAGGGGGAGATCCTCCTCCTCGTCGTCGGGGTCGGGATCGGGGTCCAGGAGGG
GCAAGAGAGCTGCCGCCGTCGACAAGCCGAGGCAGCCGCAGCGGGGCCTCGGCGTTGCGCAGCTTGAGAAGATCAGGTTG
GAGGCCGAAATGGCCGCGTACCAGAACCACCCTCCTCTCGTCGGACAGCCACCTCCGTCGTCGTCGATCCACGGAACCGG
TAGCTTCAACCTGCAGGTAATTACTCATCGCATGTTCATGCACGAAGTAGCTAGCTTGATGCTTAATTACTTGTGTTATG
TCCATTAACCGGGGTGTCTGATCTCGTCAAGACATGTCTATTAGGTGCATAGTTTCTGATTTGGTA----TGATTTGAGG
ATTTGATTGGTTGATCGAGCAGGAAGATGCACGGTCGTCGTTGAACTACTCACTGCCGTCTTCGCCGTCCTCCTCC----
-----------------------------------TTCCATGCTAACAACACCAACGTTTCATCGACCTACCCGTTCTAT
CCAAATCTTATGGTATGTGCAATTTTACTCAACTGAGGATTAAGTTCTTCACCAAGTGCATCTAGTACTGTACTATACAT
GCTAGCAGTTGGTTTCACACTTACCAAAACGTTGCCTGATGTATGTTACCGGTAGGTAGGTTAATTTAGATGGCTCCCTA
GATTAAAGATGCATGTTCATTCATTTTGGATAGTTTGGTTGATTACACATAATACAGTGCTTCCTCAATCTTATCACAAA
GAGCCATGCTATACATATGATCTTTTCCGCACAATTTTCTTCCGCTAC------TCATCAGACCGTTCAAATGCTAGTGC
AAATTGCGGGCAACCATCCGATTTTGTGTCGTACTTGAATCGTATCGTACGTGCAGTTGTTTTGTATGACAAATGTAAGT
GTGGTTTGATCATCGACACAGTCTCGTAGGTGAAATCAATTTATATGGACATATTTCTTTCAGATAAATTTATTTATTCA
CCACAGAAGTCCAGAGATGAGTGAATGGCTGCTGTTTATTAACATCAATATATGTTATATACCATTGTACCGGACTCAAC
GAAATCTTCT--GGTATATACAATTTTTCTGAACTGGGAGTTAAATTCGTCACCAAGTGTATCAACCAAGTACTTCATAT
AGATGCTAAGATTCGATTTCATATTAACAGAATATTGCTCGGTTAATCATTGTTATCGCCTTAATCCATGGC--TACGTT
AATG---ATTGTCCATTCATTTTTGATAATTTAGTTGACTAAACACAATTTAGTAAC-AAAAAAATCAGCGATCACCCAA
CAAGATCGGGAAAAGTTGGACAGAAAATCTATATTAATTATGTAAATTTCCCTTTAATTTTTGTTCTGACGCTTTAAACC
GTCCCAGCAATACTTTTCTAGTAGTAGCATGTGCTAGCTGTATCAATAATGCACGATAATATGATACACTATGTTAGAAC
CTTTTTGTATATGTATACGTGTGAATCCGCAGGGAAGAACAAGAGTATCATTGCAACCAAAGATCAGATTTTATTCTCCC
ATGCACGTGATAGCCTTATCATCATGCATCCTGCATATCTTATGCCCGGTGTGTGCTGCCTAACCAGACATGCATGTGTA
TTGTAACATACATAGATGGCCTATAATGGATGGAGATCAGGAGACATGAGATATGGCGAATCCCCAACTACTCCCATCAT
CAGGTATCTATTAGTACTAGCCTGTGTCCAATGCAAGGTC-ACGTACGATCTAAACTGCAAATGCCCCAAACAGAATTAA
TT-ATATGATTAATCGTTCATCTATTTAACCTTCAGATCAGCGTCGAATTACCATGGAGCAACTACCTATGGTGCAACAC
ATTACCCTCATTCGGGTAGCGACCACACTTTGCCTCTCTTCGAACCTGAGGTCGGTGGGTATACGGAAGTATATTTATAC
CGTCATGGATAATATATCT-----AAATGATGCATGCTGCACCAGAATTTACATCGAAAATCATGAAGTATATCTATATT
GTCATACCAATATAAAAAGCATGAGTTAGATATATG--CATGCATGAGATACTTTTTGTTGCTCCTTACGTAATCTTCAA
CTAATTTCGTAAATATTCACCTAATTGGTTTTGG-ACAAATAATATACCATTCTTTACTCAACACAATGTATCTGTAGCC
TCTTAAATGTTTTTCCCACTCCTAATTGCCCTCTGAGTTTATTTGGTATACATCAGATTTTTGTGCGTGCTTTGTATGTA
CCTGTACAGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGATGTGTTCATGCATTTGATTTCAACATG--TG
TGTGTCATCTACTCCTTGGGATGGAGGGAGTATTTCTTTTGAATAAAGTTTTAAATCTAACGTCAATTCTCTGATGGTTG
ACATATGCGGGCTTAAAGTTTCCTCGTGC-A--TGTAGTATATGTTTGATTCAATATACAATAGTCTTTCTTGAGATGCA
AAATGTCTTATCCAGTTTCCTTCAACGTCAATAATATTGAAGATAGGTAAGAAAATGCCATAAGAAATTACACTTCTATT
TGTCGAAAGTACCACTTGCTTTATGTTCCGGTTATGTTCGTCCAAACATGCTTGCATGAGTGCACGGTT-ACTGGCATGG
TATTAAATAAACCAGTCCCTAGATTTTT-----TGCTGCTAAATGTG-------------GTGATGATGTCCTTAAACCC
AGTCCAACACATGAC-------------------------CCTTTGTGGAATTTACTCAGATACAATC-AAATTTACATT
TGCTCACATACAAGCTGTTAATTGTTGTGAAA-ATT-TATATTGACTCCATTTGTTTCATGGGACAGCTAGACCTAAATC
AAATGGCGACAGTAGACTCATCGTCGGCGAGTACGAACCTGGATGATGTGGACCTTGAGCTCAAGCTATGA---------
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>chr1A_1_TraesCS1A01G389800
TGGATATGAGAGAGTACAACAAGATATAAATAGGCAGTATAATATATTTTTAGAATTTGCAAAAAGGCTAGATATGCCAT
GCTGAAGACACTATT---------------------------AAAGAAATCGATCGTTAGCTCTATAGGAATTCCCCAAT
TCTATCCATGTTGTTTGATATGAGTGATAGGTCGATCATCGTGCAGTGAGCTTCCCCAATTTTAATCTATAATAGTGACT
ACAGGAATTTGCAATTTTTTGGTATATGTCCGCCATATTCGGCTCATAGCCTGGGGCGGCACATGAACAATATATCGTTC
TGTGCCCTAAAATTATCTTTTGGTTGTCTATAAATACGAGAAATGGGGTAGCTCAATTTGATATTACACATGTTTTTT--
TTAGGGTTGATGTTACACATATTGGTTGTTGTGAGACTTGTGTGTGGGTAGGTTGTAGCGGTGCATCCATGTTTTTCGTT
GTCTGTGGTGTGCTCTTGTGGTGGCGAGCTTCCCCAATGTTAGCCACTTGGTGATGGCTTTTTTTGCTGTTTTCACATCG
GAGCCTTGGGATGCACACAAAGAAAATATGGTTGTATGCAATGGTATGATCCTCCAATCGTCTAAAGTAGTGGAAATTGA
ACTACTTAAGACTTGGATTTTAATTAGGGGATTGTCTCTGATCTGAACTCCTTTTGACTCTTCTTTCATTAATGTGGTTT
GGGTCACATGGTACCAATCGATTGCATAAACTAGCACATCAAGGCCATGGCACTATATATAGCTATCTTAACATAAATAA
TGAAATCAAGCTTTCGTTTAGGCAGCCTGGAGTCTCCATTTAATAATTAAGAGGGATCGATACTGGGCGTGCAAGGCGAT
CTCTCCCTTTCACTTTAAGTGGCCGGCCCTCTCGACACCACCCAGCTTCCCCTTTTCCTCCACCTCCTTTTCCTGCCCCC
ATTTCTGGGTCGTCTCCTACCTAGGTCTTGTCTGTTGGTAGCTATACCTGGGTACGATCCCATGAGGCCATGAGTGCAAG
CAACTTTGGGGACAGCATGGAGTGGGGCAGGGGGAGATCCTCCTCCTCGTCGTCGGGGTCGGGATCGGGGTCCAGGAGGG
GCAAGAGAGCTGCCGCCGTCGACAAGCCGAGGCAGCCGCAGCGGGGCCTCGGCGTTGCGCAGCTTGAGAAGATCAGGTTG
GAGGCCGAAATGGCCGCGTACCAGAACCACCCTCCTCTCGTCGGACAGCCACCTCCGTCGTCGTCGATCCACGGAACCGG
TAGCTTCAACCTGCAGGTAATTACTCATCGCATGTTCATGCACGAAGTAGCTAGCTTGATGCTTAATTACTTGTGTTATG
TCCATTAACCGGGGTGTCTGATCTCGTCAAGACATGTCTATTAGGTGCATAGTTTCTGATTTGGTA----TGATTTGAGG
ATTTGATTGGTTGATCGAGCAGGAAGATGCACGGTCGTCGTTGAACTACTCACTGCCGTCTTCGCCGTCCTCCTCC----
-----------------------------------TTCCATGCTAACAACACCAACGTTTCATCGACCTACCCGTTCTAT
CCAAATCTTATGGTATGTGCAATTTTACTCAACTGAGGATTAAGTTCTTCACCAAGTGCATCTAGTACTGTACTATACAT
GCTAGCAGTTGGTTTCACACTTACCAAAACGTTGCCTGATGTATGTTACCGGTAGGTAGGTTAATTTAGATGGCTCCCTA
GATTAAAGATGCATGTTCATTCATTTTGGATAGTTTGGTTGATTACACATAATACAGTGCTTCCTCAATCTTATCACAAA
GAGCCATGCTATACATATGATCTTTTCCGCACAATTTTCTTCCGCTAC------TCATCAGACCGTTCAAATGCTAGTGC
AAATTGCGGGCAACCATCCGATTTTGTGTCGTACTTGAATCGTATCGTACGTGCAGTTGTTTTGTATGACAAATGTAAGT
GTGGTTTGATCATCGACACAGTCTCGTAGGTGAAATCAATTTATATGGACATATTTCTTTCAGATAAATTTATTTATTCA
CCACAGAAGTCCAGAGATGAGTGAATGGCTGCTGTTTATTAACATCAATATATGTTATATACCATTGTACCGGACTCAAC
GAAATCTTCT--GGTATATACAATTTTTCTGAACTGGGAGTTAAATTCGTCACCAAGTGTATCAACCAAGTACTTCATAT
AGATGCTAAGATTCGATTTCATATTAACAGAATATTGCTCGGTTAATCATTGTTATCGCCTTAATCCATGGC--TACGTT
AATG---ATTGTCCATTCATTTTTGATAATTTAGTTGACTAAACACAATTTAGTAAC-AAAAAAATCAGCGATCACCCAA
CAAGATCGGGAAAAGTTGGACAGAAAATCTATATTAATTATGTAAATTTCCCTTTAATTTTTGTTCTGACGCTTTAAACC
GTCCCAGCAATACTTTTCTAGTAGTAGCATGTGCTAGCTGTATCAATAATGCACGATAATATGATACACTATGTTAGAAC
CTTTTTGTATATGTATACGTGTGAATCCGCAGGGAAGAACAAGAGTATCATTGCAACCAAAGATCAGATTTTATTCTCCC
ATGCACGTGATAGCCTTATCATCATGCATCCTGCATATCTTATGCCCGGTGTGTGCTGCCTAACCAGACATGCATGTGTA
TTGTAACATACATAGATGGCCTATAATGGATGGAGATCAGGAGACATGAGATATGGCGAATCCCCAACTACTCCCATCAT
CAGGTATCTATTAGTACTAGCCTGTGTCCAATGCAAGGTC-ACGTACGATCTAAACTGCAAATGCCCCAAACAGAATTAA
TT-ATATGATTAATCGTTCATCTATTTAACCTTCAGATCAGCGTCGAATTACCATGGAGCAACTACCTATGGTGCAACAC
ATTACCCTCATTCGGGTAGCGACCACACTTTGCCTCTCTTCGAACCTGAGGTCGGTGGGTATACGGAAGTATATTTATAC
CGTCATGGATAATATATCT-----AAATGATGCATGCTGCACCAGAATTTACATCGAAAATCATGAAGTATATCTATATT
GTCATACCAATATAAAAAGCATGAGTTAGATATATG--CATGCATGAGATACTTTTTGTTGCTCCTTACGTAATCTTCAA
CTAATTTCGTAAATATTCACCTAATTGGTTTTGG-ACAAATAATATACCATTCTTTACTCAACACAATGTATCTGTAGCC
TCTTAAATGTTTTTCCCACTCCTAATTGCCCTCTGAGTTTATTTGGTATACATCAGATTTTTGTGCGTGCTTTGTATGTA
CCTGTACAGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGATGTGTTCATGCATTTGATTTCAACATG--TG
TGTGTCATCTACTCCTTGGGATGGAGGGAGTATTTCTTTTGAATAAAGTTTTAAATCTAACGTCAATTCTCTGATGGTTG
ACATATGCGGGCTTAAAGTTTCCTCGTGC-A--TGTAGTATATGTTTGATTCAATATACAATAGTCTTTCTTGAGATGCA
AAATGTCTTATCCAGTTTCCTTCAACGTCAATAATATTGAAGATAGGTAAGAAAATGCCATAAGAAATTACACTTCTATT
TGTCGAAAGTACCACTTGCTTTATGTTCCGGTTATGTTCGTCCAAACATGCTTGCATGAGTGCACGGTT-ACTGGCATGG
TATTAAATAAACCAGTCCCTAGATTTTT-----TGCTGCTAAATGTG-------------GTGATGATGTCCTTAAACCC
AGTCCAACACATGAC-------------------------CCTTTGTGGAATTTACTCAGATACAATC-AAATTTACATT
TGCTCACATACAAGCTGTTAATTGTTGTGAAA-ATT-TATATTGACTCCATTTGTTTCATGGGACAGCTAGACCTAAATC
AAATGGCGACAGTAGACTCATCGTCGGCGAGTACGAACCTGGATGATGTGGACCTTGAGCTCAAGCTATGATCCCACCTG
GTTAAACATG---TGCATGCTCCTTGCATATTAATGGATATGATGCCACACGAAGCGGAGAGCTTTGTCGCGCGGTGTGT
TTAATTCTCATGCATATATTGGATTGTGATTGATTTGGCGATGGATGCTGGCTAGCTAGCTAGTTAATTTGTACAGACAT
AAGCACACTACGGCCATGGGTTTCAGAATATATGGCGCAGAATCACAAGGATATATAGGGCAGCTGGTCTACCTAGGCCA
CTGATCCCGCTGCCTTTTGCACCTAGCTATTGTTGTATGATGACAAGGTACGTATATTCTGGTGCAGTACTATGGGCGTC
GATTGTTCTCGATCTTAATATTGCTGGTGATCTTAATATCGTA----ATCATGCTAAGGAGCACTCCTGGCTCAAAAAGG
TCTTTCGTTGTTTGAAAAAAAATTCCCTATGAAATCATGTGGAAATTTGCATGCTGCTAGGAAGCACTTTACATGC---A
TATGCTCCGATGTTCTTATGAATATACCTACG-----------TGGTATCTGATATTATCTTTTT---------------
---------------------------------------------GACCTTTTCTAAGCCCCATGCATCCATGACATGTA
CACAAAG-----GAGAACAAATGTACTTCCTCTGTCCGGGTGTATAGGACATTCGCATAGATCTAGGTCATCAATTTGAC
TAACTAAATAAGTGTATATGTTATCAAAAGCATATTATTGGACA--TATGCGGATGTAGTTTCTAAACATATTCTTTTTG
TCACATATAATACATACATATTTAGCTAGCTAAATCATCGACCTAGAATTACGTGTATACCCTATACACCTGGACGGAGG
TAGTATATAACACTCATGGGATGGGTGAAGGATGCATAGGTAAGTGTTGTCTCCGGCCATGGCTTTGTTTTGTGCACCTT
TGTAAGTTAGATTTGTTTGTAGCTAAGCTCCCAATCATGCTGAGATTGACGCTTTGCGTCTTTTTATGTTTAATTATCAA
GTAAATTCCACTCTGTACCATATAAGATTGAGTTTATGA
>chr1B_1
TGGATATGAGAGAGTACAACAAGATATAAATAGGCAGTATAATATATTTTTAGAATTTGCAAAAAGGCTAGATATGCCAA
GCTGAACACACTATTATGGTAGAATCACTAGTGACGAGTCCAAAATAAATCGATCGTTAGCTCTATAGGAATTCCCCAAG
TCTATCCATGTTGTTTGATGTGAGGGGTAGGTCGAACATCGTGTGGCGAGCTTCCCCAACTTTAATCTATAATTGTTCA-
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--------------------------------TGTATGCAATCGTATGATCCTCCAATTGTCTAAAGTAGTGGAAATTGT
ACTACTTAAGACTTGGATTTTAGTTAGGGGATCGTCTCTGATCTGAACCCCTTTTGACTCTTCTTTCGTTAATGTGGTTT
GGGTCACATGGTATCGATCGATTGCATAAACTAACACACCAAGGCCATGGCACTATATATAGCTATCTTAACATAAATAA
TGAAATCAAGCTTTCGTTTAGGCAGGCTGGAGTCTCCATTTAATAATTAAGAGGGATCGATACTGGGCGTGCAAGGCGAT
CTCTCCCTTTCACTTTAAGTGGCCGGCCCTCTCGACACCACCCAGCTTCTCCTTTTCCTCCACCTCCTTTTCTTGCCCCC
ATTTCTGGGTCGTCTCCTACCTAGGTCTTGTCTGTTGGTAGCTATACCTGGGTACGATCCCATGAGGCTATGAGTGCAAG
CAACTTTGGGGACAGCATGGAGTGGGGCAGGGGGAGATCCTCCTCCTCCTCGTCGGGGTCGGGGTCGGGGTCCAGGAGGG
GCAAGAGAGCCGCCGCCGTTGACAAGCCGAGGCAACCGCAGCGGGGCCTCGGCGTCGCGCAGCTTGAGAAGATCAGGTTG
CAGGCCGAAATGGCCGAGTACCAGCACCACCCTCCTCTCGTCGGACAGCCACCTCCGTCGTCGTCGATCCACGGAACCGG
TAGCTTCAACCTGCAGGTAATCACTCATCGCATGTTCATGCACGAAGTAGCTAGCTTGATGCTTAATTACTTGTGTTATA
TTCATTAACCGGGCTGTCTGATCTTATCAATACATGTCTATTAGGTGCATGATTTCTGATTTGGTA----TGATTTTGGA
ATTTGATTGGTTGATCGAGCAGGAAGATGCACGCTCGTCGTTGAACTACTCACTGCCGTCGTCGCCGTCCTCCTCC----
-----------------------------------TTCC---------------------------------------AT
CCAAATCTTGTGGTACGTGCAATTTTACTAAACCGAGGATTAAGTTCTTCACCAAGTGCATCTAGTACTGTACTATACAT
GCTAGCAGTTGGTTTCACACTTACCAAAACGTTGCCTGATGTATGTTACCGGTAGGTAGGTTAATTTAGATGGCTCCCTA
GATTAAAGATGCATGGTCATTCATTATGGATAGTTTGGTTGATTACACATAATACAGTGCTTTCTCAATCTTATCACAAA
GAGCCATGCTATCG-TATGATCTTTTCTGCACAATTTTCTTCTTCTGCTACTCATCA---GACCATTCACATGCTAGTGC
AAATTGCGGGCAACCATCCGATTTTGTGTTGTGCTTGAGTCATATCGTACGTGCAGTTGTTTCGTATGACAAATGTAAGT
GGGGTTTGATCATCGACACGGTCTCGTAGGTGAAATCAATTTATATGAACATATTCCTTTCAGATAAAAATATTTATTCA
CTACAGAAATCCAGAGATGAGTGAATGGCAGCTGTTTATTAACATCAATATATGTTATATACCATTGTACTGGATTCATC
GAAATCTTTT--GGTATATGCAATTTTACTGAACTGGGAATTAAATTCGTCACTAAGTGTATCAATTAAGTACTTTATAT
AGATGCTAAGATTTGATTTCATATTACCAAAATATTGCTCAGTTAATCATTGTTATCGCCTTAATCCGTGGC--TGCGTT
AATGATTATTGTCCATTCATTTTTGATAATTTAGTTGACTAAACAAAATTTAGTAACAAAAAAAATCAGCGATCACCCCA
CAAGATCAGGAAAAGTTGGACAGAAAATCTATCTTAATTATGTAAATTTCCCTTTAATTTTTGTTCTGACGCTTTAAATC
GTCCCAGCAATACTTTTCTAGTAGTACCATGTGCTAGCTGTATCAATAATGCACCATAATATGATACACTATGTTAGAAC
CTTTTTGTATATGTATACGTGTGAATCCGCGGGGAAGAACAAGAGTATCATTGCAACCAAAGATCAGATTTTATTCTCCC
ATGCACGTGATAGCCTTATCATCATGCATCCTGCATATCTTATGCCCGGTATGTGCTGCCTAACCAGACATGCATGTGTA
TTGTAACATACATAGATGGCCTATAATGGATGGAGATCAGGAGACATGAGATATGGCGAATCCCCAACTGCTCCCATCAT
CAGGTATCTATTAGTACTAGCCTGTGTCCAATGCAAGGTCCACGTACGATCTAAACTGCAAATGTCCCAGACAGAATTAA
TTAATATTATTATTCTCTCATATAATTAACCTTCAGATCAGGGTTGAATTACCATGGAGCAACTACCTATGGTACAACAC
ATTACCCTCATCCGGGTAGCGATCACACGTTACCTCTCTTCGAACCCAAGGTCGGTGGGTATGCAGAAGTGTATTTATAC
GATCATGGATAATCGAACTGTTAAAAATGATGCATGCTGCACCAAAATTTACATCCAAAATCATGAAGTATAT-------
----------------AAGGATGAGCTAGATATACACACATGCATGAGATACTTTTTGTTGCTCCCTACATAATCTTAAT
CTAATTTCACAAATATTCATCTGGTAGTTTTTGGAAAAAATCATATACCCTTCTTTACTCAGCACTATATATCTGTGCCT
TTTTAATTGTTTTTCCTACTCCTAAGTACTCTC-GAGTTTATTTGGTATACATGAGATTTTTGTTAGTGTTTTGTATGTA
AAGTTTATTTTTTGGGATTGCTTGGGGGT-------------GGGGGTA-------------------------------
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-------------------------------------------ATACAATGTGTTAATGCATTTGCTTTCAAGATG--TG
TGTGTCATC---------------------TATTTCTTTTGAATAATGCTTTAAATGTAACATCAATTCTCTGATGGTTG
ACATATG-GGGCTTAAAGTTTTGTTGTGCTAATTGTAGTGCACGTTTGATTCAATATACACTAGTATTTCTTGAGATGCA
ACATGTCTTGTCCAGTTTCCTTCATCGCCAATAATATTGAAGATATGTAAGAAAATGCTATAAGAAACTACACTTGTATT
TGTAGAAAGTACCACTTG-TTTTTGTTTCGGTTATGTCAGTCCAACA-----TGCTTGAGCGCACGGTTTACTGACATGG
TACTGC--AAACCAGTTCCTAGATTTTTCTTTTTGCTGCTAAATATCTATATG-TGCAATGTGATGATGTACTTAAAGCC
AGTCCAACAATGTGCCATCTTA---------------TGTCCATTATAGAGTTTACTCCGATCCAATCAAAATTTACATT
TGCTCATAAATAAGCTGTTAATTGTTGTGAAAAAAAATATGTTGACTCCATTTGTTTCATGTGACAGCTGGACCTAAATC
AAATGGCGACAGTAGACTCATCGTCGGCGAGTACGAACCTGGATGATGTGGACCTTGAGCTGAAGCTATGATACCACCTT
GTTAAACATG---TCCATGCTCGTGGCATATGCATCGATATGATGCCACACGAAC---------------CGCGGTGTGT
TTAATTCTCATGCATATATTGGATTGCGATTGATTTGGTGATGGATGCTGGCTAGCTAGCTAGTTAATTTGTACAGACAT
AAGCACACTACGGCCATGGATTTCAGA-----------------------ATATATATGGCAGCTGGTCTGCCTAGGCCA
CTGATCCTGCTGCCTTTTGCACCTAGCTAGTGTTGTATGATGACAAGGTACGTATATTCTGGTGCAGTACTTTGGGCGTC
GATTGTTCTCGATATTAATATTGCTGGTGGTGTTAATATCGTA----AGGATGCGTAGGAGAACTCCTGGCTCAAAAAGG
TGTTTTTACATTGC--------------------------------TTGCATGCTGCTAGGAAGCACTTTACATCATGTG
-----TCCGATTTTTTT---------------------------------------------------------------
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>chr1D_279
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-----------------------------------------------------------------AACAATATATCGTTC
TGTGCCCAAAAAATATCTTTTGGTTGTCTACAAATACGAGAAAT-GGGTAGCTCCATTTGATATTACACATGTTTTTTAT
TTAGGATTGATGTTACACATGTTGGTTGTTGT--GACTTGTGTGTGGGTAGGTTGTAATGGTGCATCCATGTTTTTCGTT
GTCTGGGC-GTGCTCTTGTGGTGGCGAGCTTCCCCAATGTTAACCACTCGGTGATGGCTTTTTTAGCTGTTTTCACGTCG
GAGCCCTGTGCGGCACACAAACAAAATATGGTTGTATGCAATCGTATGATCCTCCAATTGTCTAAACTAGTGGAAATTGT
ACTACTTAAGACTTGGATTTTAGTTAGGGGATTGTCTCTGATCTGAACCCCTTTTGACTCTTCTTTGGTTAATGTGGTCT
GGGTCACATGGTACCGATCGATTGCATAAACTAACACATCAAGGCCATGGCACTATATATAGCTATCTTAACATAAATAA
TGAAATCAAGCTTTCGTTTAGGCAGGCTGGAGTCTCCATTTAATAATTAAGAGGGATCGATACTGGGCGTGCAAGGCGAT
CTCTCCCTTTCACTTTAAGTGGCCGGCCCTCTCGACACCACCCAGCTTCTCCTTTTCCTCCACCTCCTTTTCTTGCCCCC
ATTTCTGAGTCGTCTCCTACCTAGGTCTTGTCTGTTGGTAGCTATACCTGGGTACAATCCCATGAGGCCATGAGTGCAAG
CAACTTTGGGGACAGCATGGAGTGGGGCAGGGGGAGATCCTCCTCCTCATCGTCGGGGTCGGGGTCGGGGTCCAGGAGGG
GCAAGAGAGCCGCCGCCGTCGACAAGCCGAGGCAGCCGCAGCGGGGCCTCGGCGTCGCGCAGCTTGAGAAGATCAGGCTG
GAGGCCGAAATGGCCGCGTACCAGCACCACCCTCCTCTCGTCGGACAGCCACCTCCGTCGTCGTTGATCCACGGAACCGG
TAGCTTCAACCTGCAGGTAATTACTCATCGCATGTTCATGCACGAAGTAGCTAGCTTGATGCTTAATTACTTGTGTTATG
TTCATTAACGGGGGTGTCTGATCTTGTCAAGACATGTCTATTAGGTGCATGATTTCTGATTTGGTATATATGATTTTGGA
ATTTGATTGGTTGATCGAGCAGGAAGATGCACGGTCGTCGTTGAACTACTCACTGCCGTCTTCGCCGTCCTCCTCCTTCC
ATGCTAACAACACCAACGTTTCATCTACCTACCCGTTCC---------------------------------------AT
CCAAATCTTGTGGTATGTGCAATTTTACTCAACTGAGGATTAAGTTCTTCACCAAGTGCATCCA-----GTACTATACAT
GCTAGCAGTTGGTTTCACACTTACCAAAACGTTGCCTTTTGTATGTTACCGGTAGGTAGGTTAATTAAGATAGCGCCCTA
GATTAAAGATGCATGTTCACTCA-TATGGATAGTTTGGTTGATTACACATAATACACTGCTTCCTCTATCTTATCACAAA
GAGCCATGCTATACATACGATCTTTTCTGTACAATTTTCGTGCGACGCTACTCATCATCAGACTATTCACATGCTGGTGC
AAATTGCGGGGCACCATCCGATTTTGTGTCGTGCTTGAAACTTATCGTACATGCAGTTGTTATGTATCACAAATGTAAGT
TTGGTTTGATCATCGACACAATCTCATAGGTGAAATCAATTTATATGAACATATTTCACTA-------------------
----AGAAATCCTGAGATGAGTGGACGGCTGCTGTT-ATTAACATCTATACAG----TACACTATTGTACCAGATTCATC
GAAATCTTGTGGGGTATATGCATTTTTACTGAACTGGGAATTAAATTCATCTCTAAGTGTATCAATTAAGTACTTTATAG
AGATGCTAAGATTTTATTCCATAAGG---AAATATTGCTCGGTTAATCATTGTTATCGCCATATTCCATGGCCATAGGTT
AATC---GTTGTCCA-TCATTTTCGATAATTTAGTTGACTAAACACAATTTAGTAAC-AAAAAAATCAGCGATCACCCCA
CAAGATCGGGAAAAGTTGGACAGAAAATCTATCTTAATTATATAAATTTTCCTTTAATTTTTGTTCTCACGCTTTAAATC
GTCCCAGCAATACTTTTCTAGTAGTAGCATGTGCTAGCTGTATCAATAATGCACGATAATATGATACACTATGTTAGAAC
CTTTTTGTATATGTATACGTGTGAATCCGCAGGGAAGAACAAGAGTATCATTGCAACCAAAGATCAGATTTTATTCTCCC
ATGCACGTGATAGCCTTATCATCATGCATCCTGCATATCTTATGTCCGGTATGTGCTGCCTAACCAGACATGCATGTGTA
TTGTAACATACATAGATGGCCTATAATGGATGGAGATCAGGAGAGATGAGATATGGCGAATCGCCAACTGCTCCCATCAC
CAGGTATCTATTAGTATTAGCCTGTGTCCAATGCAAGGTCCACGTACGATCTAAACTGCAAATGTCCCAGACAGAATTAA
TTAATATTATTAATCTCTCGTATAATTAACCTTCAGATCAGCGTCAAATTATCATGGAGCAACTACCTATGGTACAACAC
ATTACCCTCATCCGGGTAGCGATCACACGTTGCCTCTCTTCGAGCCCAAGGTCGGTGGGTATGCAGAAGTGTATTTATAC
GATCATGGGTAATCTAACTGTTAAAAATGATGCATGATGCACCAAAATTTACATCCAAAATCATGAAGTATAT-------
----------------AAGGATGAGTTAGATATACACACATGCATGAGATACCTTTTGTTGCTCTGTACATAATCTTAAT
CTAATTTCACAAATATTCACCTGGTGGTTTTTGG-AAAAATCGTATAACCTTCTTTACTCAACACTATATATCTGTAGCC
TCTTAGTTGTTTTTCCTACTCCTAATTAATCTCTGAGTTTATTTGGTATACATGAGATTTTTCTTAGTGTTTTGTATGTA
AAGTTTATTTTTCGAGATTGCTTGGGGTTGGGGGTGGGGGTGGGGGGTA-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------ATACAATGTGTTAATGCATTTGCTTTCAAGATGTGTG
TGTGTCATC---------------------TATTTCTTTTGAATAATGCTTTAAATCTAACATCAATTCTCTGATGGTTG
ACATATG-GGGCTTAATGTTTTCTTGTGC-AATTGTAGTACACGTATGATTCAATATACACTAGTATTTCTTGAGATGCA
ACATGGCTTGTCCAGTTTCCTTCATCATCAATAATGTTGAAGATATGTAAGAAAATGCTATAAGAAACTACACTTGTATT
TGTAGAAAGTACCACTTG-TTTTTGTTTCGGTTATGTCAGTCCAACA-----TGCTTGAGCGCACGGTTTACTGACATGG
TACTAC--AAACCTGTCCCTAGATTT---TTTTTGCTGCTAAATATCTATATGGTGCAATGTGATGATGCCCTTAAAGCC
AGTGCAACAATGTGCCATCTTATTTTTGCAAACACATTGTCCATTGTAGAGTTTACTCCGATACAATG-AAATTTACATT
TGCTCTTAAATAAGCTGTTAATTGTTGTGAAA-AACATATGTTGACTCCATTT-TTTCATGTGACAGCTAGACCTAAATC
AAATGGCGACAGTAGACTCATCGTCGGCGAGTACGAACCTGGATGATGTGGACCTTGAGCTGAAGCTATGATCCCACCTG
GTTAAACATGATGTCCATGCTCCTGGCATATTCATCTATATGATGCCACACGAAC---------------CGCGGTGTGT
TTAATTCTCATGCATATATTGGATTGTGATTGATTTGGTGATGGATGCTGGCTAGCTAGCTAGTTAATTTGTACAGACAT
AAGCGCACTATGGCCATGGATTTCAGAATATATAAATGTTTCTGACG-------------------------------CA
CTGATCCGGCTGCCTTTTGCACCTAGCTTCTGTTGTATAATGACAAGGTACGTATATTCTGGTGCAGTACATTGGGCGCC
GATTGTTCTCCATATT-ATATTGCTGGTGGTCTTAATATCGTATATAAGGATGCGTAGGAGCACTCCTGGCTCAAAAAAG
TGTTTTTTCATTGC--------------------------------TTGCATGCTGCTAGGAAGCACTTTACATGTATGA
TGTGCTCCGATTTTTTTTTGATGAATAACCGTACGTGGTATACTGGTATCTGATATTATCTTTTTTTTTCATTGTTTTTG
ATATAGCTTACCACTCATGCCAAGTGGTATATGATATTATCTTTTGACCTTTTCTAAGCCCATTGCATGCATGAACTTAT
ACACAAACGTACGAGAACTAATGTACTTCCTGTGTTAGGGTGTATAGGGCATGCATATAATTCTAGGTCATCAATTTGAC
TAACTATATACGTGTATATGTCAGCAAAAGTATATCATTGGATTCGTATGCGGACGTAGTTTCTAAACATATATTTTTTG
TCACATATA----ATACATATTTAGGTAGCTAAATCATTGACCTAGAACTACGGC-ATGCACTACACACCTGGAC-GAGG
TAGTATATAGCACTCATGGGATGGGGGTCCAAGGATGC----------GTCTCTGGCCGCGGCTTTGTTTTATGCATCTT
TGGAAATTAGATATGTTTGTAGTTAAGCTCCCCATCATGCTGAGATTGCCGCTTTGCATCTATTTATGTTTAATTATCAA
GTAAATTCCACTTTTTATCATCTAAGATTGAGTTTATGA
>SNPs
-------------------------------------------------------------------------------S
------S--------------------------------------S---------------------------------S
-------------------S----S-S--------S-------SS-S------------S-------------S--SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------
-------S----S-----------------S-------------S---------S-------------------------
-----S--------------S-----------SS-----------------------SS---------------------
-----S-SS---------------------------------S-----S---------------S-----------S---
-----S--S-SS---------S--------------------S---------------S--------------------S
----------------------S-------------------------S------------------S------------
---------------S-----------------S----------------------------------------------
-------------------------S------------------------------------------------------
-------------------------------------------------S----------------------S-------
--------------------------------------------------------------------------------
------------------------------------------------S--------------S----------------
----------S--------------------------------------------S------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
-S----------------------S-------------------------SS------------------------SS-S
--------------------------------------------------------------------------------
---------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
---------S----------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S------------------------------------------------------
---------------------------S------------------S-----------------S----S----------
--------------------------------S--------S--------------------------------------
-----------------------------------------------S--------------------SS----------
-S------S-----------------------------------------------------------------S---S-
--------S----------S-------S-----------S-------------S-----------SS--------S----
-------------S------------S--S--------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------S---------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
---------------------------------------------------------------------S----------
----------------------------------------------------------------S----S----------
-------S-------SS----S--S------------------------------------------------S------
-----------S----------S-----S-----------------SS--------------S-S-----S---------
SS-----------S--S---------------------------S----------S-----------------SSSSSSS
SSSSSSSSSSSSSSSS---S--------------SS-----------------------------S---S-------S-S
--------SS------------SS-S-S--------S----S-------S---------------S--S-----------
------S---------S----------S-S-----------------------S----------SS---S----------
SSSS-SSSSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S-------S---------S------S-------
---------SSSSSSSSSSSSSSSSSSSSS----------------S-S------------S------------------
-------S-------------S--S---------------S-S-----------------S----S--------------
-S-------S--------------S--------------------S------------S--------S-------S----
---S--------------S---S----S---------SS------SSSSSSS---S----S-------------S-----
--S--SSS------------------------------------S-S------------------------------S--
---------SSSSS----------------------------S----S--S-------S---------------------
------S-S-S-----------------------SS----S--------------------S------------------
-------------------------------------------------------------S------------------
--------------S---------S-------S--S------------------SSSSSSSSSSSSSSSS----------
--------------------------------------S-----------------------------------------
-------------------S-------------SSSSSSSSS-S--SSSS-------S------------S---------
-------S---------------------S-----------------------------------------S--------
-------------S---------------S------------------SS----SS------------------------
-S---SS-SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------S----
-S---------S--S--S---SS-SSSSSSSS------------------------------------------------
-------------------------------------------------------------SS-----S-----SS-SSS
SSSS--S-----------S------------S---SS-----------S---S-SS---SS-------------------
------S---S----------S-S------S----S------SS----------S-----------------SS------
---------SSSS------------S------------S---------S----SSS--S-S---S----------S----
---------S---------------S-SSSS-S-SSSSSSSSSSSSSS-----S----SS-----------S----S---
--S--S------S---------S---------S---------------S--------S---S------------------
------------S-S--S---S-----------------
>forward_582
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--GCCTTGGGATGCACACAAAG----------------------------------------------------------
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>reverse_1575
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------------------------------------------------------ACGTTTCATCGACCTACCCG------
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>forward_1563
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------------------------CGTCCTCCTCCTTCCATGC-------------------------------------
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>reverse_2691
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--------------------------------------------------GTGTGCTGCCTAACCAGACA----------
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>forward_1594
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------------------------------------------------------ACGTTTCATCGACCTACCCG------
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>reverse_3008
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-----------------------------------------------GAGGTCGGTGGGTATACGGA-------------
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>forward_1905
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---------------------------------------------TTCCGCTACTCATCAGACCG---------------
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>reverse_3345
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----------------------------------------------------------------GCGTGCTTTGTATGTA
CCTGT---------------------------------------------------------------------------
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>forward_3023
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-------------------------------------------ACCTGAGGTCGGTGGGTATA-----------------
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>reverse_4787
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------------------------------------------------------------------GTCGCGCGGTGTGT
TTAATT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
